Guide to the Human Genome
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Name: ZNF561 Sequence: fasta or formatted (486aa) NCBI GI: 206725458
Description:

zinc finger protein 561

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.3         21           2
 C cysteine            5.8         28           1
 D aspartate           2.7         13           2
 E glutamate           7.6         37           2
 F phenylalanine       5.3         26           2
 G glycine             7.4         36           2
 H histidine           4.7         23           1
 I isoleucine          3.7         18           1
 K lysine             10.3         50           2
 L leucine             6.2         30           2
 M methionine          1.6          8           1
 N asparagine          2.9         14           1
 P proline             3.1         15           1
 Q glutamine           3.9         19           2
 R arginine            4.9         24           2
 S serine              8.2         40           2
 T threonine           7.8         38           2
 V valine              4.9         24           1
 W tryptophan          0.6          3           1
 Y tyrosine            3.9         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 561 
ZNF562                0.728   zinc finger protein 562 isoform a 
ZNF562                0.728   zinc finger protein 562 isoform a 
ZNF812                0.613   PREDICTED: zinc finger protein 812 
ZNF812                0.613   PREDICTED: zinc finger protein 812 
ZNF812                0.613   PREDICTED: zinc finger protein 812 
ZNF562                0.603   zinc finger protein 562 isoform b 
ZNF426                0.468   zinc finger protein 426 
ZNF778                0.441   zinc finger protein 778 
ZNF266                0.414   zinc finger protein 266 
ZNF266                0.414   zinc finger protein 266 
ZNF846                0.395   zinc finger protein 846 
ZNF420                0.385   zinc finger protein 420 
ZNF709                0.365   zinc finger protein 709 isoform a 
ZNF490                0.364   zinc finger protein 490 
ZNF383                0.364   zinc finger protein 383 
ZNF560                0.362   zinc finger protein 560 
ZNF20                 0.357   zinc finger protein 20 
ZNF283                0.357   zinc finger protein 283 
ZNF595                0.355   zinc finger protein 595 
ZNF429                0.353   zinc finger protein 429 
ZNF791                0.353   zinc finger protein 791 
ZNF699                0.352   zinc finger protein 699 
ZNF30                 0.352   zinc finger protein 30 isoform b 
ZNF30                 0.351   zinc finger protein 30 isoform a 
ZNF136                0.351   zinc finger protein 136 
ZNF30                 0.351   zinc finger protein 30 isoform a 
LOC729747             0.351   similar to zinc finger protein 709 
ZNF565                0.346   zinc finger protein 565 
ZNF565                0.346   zinc finger protein 565 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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