Guide to the Human Genome
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Name: LOC728361 Sequence: fasta or formatted (185aa) NCBI GI: 239746256
Description:

PREDICTED: similar to OVO homolog-like 1

Not currently referenced in the text

Other entries for this name:
alt prot {234aa} PREDICTED: similar to OVO homolog-like 1
alt prot {246aa} PREDICTED: similar to OVO homolog-like 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         15           2
 C cysteine            5.4         10           2
 D aspartate           4.3          8           1
 E glutamate           2.7          5           1
 F phenylalanine       3.8          7           1
 G glycine             8.1         15           2
 H histidine           6.5         12           1
 I isoleucine          1.6          3           1
 K lysine              3.8          7           1
 L leucine             7.6         14           1
 M methionine          1.6          3           1
 N asparagine          0.5          1           1
 P proline             8.1         15           2
 Q glutamine           4.3          8           2
 R arginine           13.0         24           2
 S serine              8.1         15           3
 T threonine           4.9          9           1
 V valine              3.8          7           1
 W tryptophan          1.6          3           1
 Y tyrosine            2.2          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to OVO homolog-like 1 
LOC728361             1.000   PREDICTED: similar to OVO homolog-like 1 
LOC728361             1.000   PREDICTED: similar to OVO homolog-like 1 
OVOL1                 0.374   OVO-like 1 binding protein 
OVOL2                 0.371   zinc finger protein 339 
ZNF562                0.154   zinc finger protein 562 isoform b 
ZNF562                0.154   zinc finger protein 562 isoform a 
ZNF562                0.154   zinc finger protein 562 isoform a 
MYNN                  0.151   myoneurin 
ZNF749                0.151   zinc finger protein 749 
ZNF594                0.149   zinc finger protein 594 
ZNF623                0.143   zinc finger protein 623 isoform 1 
ZSCAN10               0.143   zinc finger and SCAN domain containing 10 
ZNF623                0.143   zinc finger protein 623 isoform 2 
ZNF121                0.141   zinc finger protein 121 
ZNF257                0.141   zinc finger protein 257 
ZNF429                0.138   zinc finger protein 429 
ZNF577                0.138   zinc finger protein 577 isoform b 
ZNF577                0.138   zinc finger protein 577 isoform a 
ZNF680                0.138   zinc finger protein 680 isoform 1 
ZNF716                0.138   PREDICTED: zinc finger protein 716 
ZNF716                0.138   PREDICTED: zinc finger protein 716 
ZNF716                0.138   PREDICTED: zinc finger protein 716 
ZNF716                0.138   PREDICTED: zinc finger protein 716 
LOC344065             0.138   PREDICTED: similar to zinc finger protein 570 [Homo...
LOC344065             0.138   PREDICTED: similar to zinc finger protein 570 [Homo...
LOC344065             0.138   PREDICTED: similar to zinc finger protein 570 [Homo...
ZNF678                0.138   zinc finger protein 678 
ZNF211                0.138   zinc finger protein 211 isoform 2 
ZNF211                0.138   zinc finger protein 211 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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