Search of human proteins with 40806190

Search of human proteins with 40806190

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|40806190 TMEM189-UBE2V1 readthrough transcript [Homo
sapiens]
         (370 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|40806190 TMEM189-UBE2V1 readthrough transcript [Homo sapiens]      784   0.0  
gi|40806193 transmembrane protein 189 isoform 1 [Homo sapiens]        501   e-142
gi|241982751 transmembrane protein 189 isoform 2 [Homo sapiens]       490   e-139
gi|73765546 ubiquitin-conjugating enzyme E2 variant 1 isoform d ...   291   6e-79
gi|40806164 ubiquitin-conjugating enzyme E2 variant 1 isoform a ...   291   8e-79
gi|40806167 ubiquitin-conjugating enzyme E2 variant 1 isoform a ...   291   8e-79
gi|4507797 ubiquitin-conjugating enzyme E2v2 [Homo sapiens]           272   3e-73
gi|12025663 ubiquitin-conjugating enzyme E2 variant 1 isoform c ...   189   3e-48
gi|163660385 ubiquitin-conjugating enzyme E2K isoform 2 [Homo sa...    55   1e-07
gi|4885417 ubiquitin-conjugating enzyme E2K isoform 1 [Homo sapi...    55   1e-07
gi|13489085 ubiquitin-conjugating enzyme E2G 1 [Homo sapiens]          50   3e-06
gi|32967280 ubiquitin-conjugating enzyme E2A isoform 1 [Homo sap...    47   2e-05
gi|4507771 ubiquitin-conjugating enzyme E2B [Homo sapiens]             47   2e-05
gi|22749327 ubiquitin-conjugating enzyme E2E 2 [Homo sapiens]          47   3e-05
gi|33359691 ubiquitin-conjugating enzyme E2E 1 isoform 2 [Homo s...    47   3e-05
gi|4507779 ubiquitin-conjugating enzyme E2E 1 isoform 1 [Homo sa...    47   3e-05
gi|4507773 ubiquitin-conjugating enzyme E2D 1 [Homo sapiens]           45   1e-04
gi|5902146 ubiquitin-conjugating enzyme E2C isoform 1 [Homo sapi...    45   1e-04
gi|32967289 ubiquitin-conjugating enzyme E2C isoform 4 [Homo sap...    45   1e-04
gi|32967287 ubiquitin-conjugating enzyme E2C isoform 4 [Homo sap...    45   1e-04
gi|7661808 ubiquitin-conjugating enzyme E2T [Homo sapiens]             45   1e-04
gi|33359694 ubiquitin-conjugating enzyme E2E 3 [Homo sapiens]          44   2e-04
gi|5454146 ubiquitin-conjugating enzyme E2E 3 [Homo sapiens]           44   2e-04
gi|22212943 ubiquitin-conjugating enzyme UBC3B [Homo sapiens]          42   0.001
gi|8393719 ubiquitin-conjugating enzyme E2D 4 (putative) [Homo s...    41   0.002
gi|16357477 ubiquitin-conjugating enzyme Cdc34 [Homo sapiens]          40   0.003
gi|4759282 ubiquitin-conjugating enzyme E2L 6 isoform 1 [Homo sa...    40   0.003
gi|33188456 ubiquitin-conjugating enzyme E2D 2 isoform 2 [Homo s...    40   0.004
gi|4507775 ubiquitin-conjugating enzyme E2D 2 isoform 1 [Homo sa...    40   0.004
gi|33149324 ubiquitin-conjugating enzyme E2D 3 isoform 3 [Homo s...    40   0.004

>gi|40806190 TMEM189-UBE2V1 readthrough transcript [Homo sapiens]
          Length = 370

 Score =  784 bits (2024), Expect = 0.0
 Identities = 370/370 (100%), Positives = 370/370 (100%)

Query: 1   MAGAEDWPGQQLELDEDEASCCRWGAQHAGARELAALYSPGKRLQEWCSVILCFSLIAHN 60
           MAGAEDWPGQQLELDEDEASCCRWGAQHAGARELAALYSPGKRLQEWCSVILCFSLIAHN
Sbjct: 1   MAGAEDWPGQQLELDEDEASCCRWGAQHAGARELAALYSPGKRLQEWCSVILCFSLIAHN 60

Query: 61  LVHLLLLARWEDTPLVILGVVAGALIADFLSGLVHWGADTWGSVELPIVGKAFIRPFREH 120
           LVHLLLLARWEDTPLVILGVVAGALIADFLSGLVHWGADTWGSVELPIVGKAFIRPFREH
Sbjct: 61  LVHLLLLARWEDTPLVILGVVAGALIADFLSGLVHWGADTWGSVELPIVGKAFIRPFREH 120

Query: 121 HIDPTAITRHDFIETNGDNCLVTLLPLLNMAYKFRTHSPEALEQLYPWECFVFCLIIFGT 180
           HIDPTAITRHDFIETNGDNCLVTLLPLLNMAYKFRTHSPEALEQLYPWECFVFCLIIFGT
Sbjct: 121 HIDPTAITRHDFIETNGDNCLVTLLPLLNMAYKFRTHSPEALEQLYPWECFVFCLIIFGT 180

Query: 181 FTNQIHKWSHTYFGLPRWVTLLQDWHVILPRKHHRIHHVSPHETYFCITTGVKVPRNFRL 240
           FTNQIHKWSHTYFGLPRWVTLLQDWHVILPRKHHRIHHVSPHETYFCITTGVKVPRNFRL
Sbjct: 181 FTNQIHKWSHTYFGLPRWVTLLQDWHVILPRKHHRIHHVSPHETYFCITTGVKVPRNFRL 240

Query: 241 LEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPE 300
           LEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPE
Sbjct: 241 LEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPE 300

Query: 301 APPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLP 360
           APPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLP
Sbjct: 301 APPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLP 360

Query: 361 QPPEGQCYSN 370
           QPPEGQCYSN
Sbjct: 361 QPPEGQCYSN 370


>gi|40806193 transmembrane protein 189 isoform 1 [Homo sapiens]
          Length = 270

 Score =  501 bits (1291), Expect = e-142
 Identities = 238/255 (93%), Positives = 242/255 (94%), Gaps = 5/255 (1%)

Query: 1   MAGAEDWPGQQLELDEDEASCCRWGAQHAGARELAALYSPGKRLQEWCSVILCFSLIAHN 60
           MAGAEDWPGQQLELDEDEASCCRWGAQHAGARELAALYSPGKRLQEWCSVILCFSLIAHN
Sbjct: 1   MAGAEDWPGQQLELDEDEASCCRWGAQHAGARELAALYSPGKRLQEWCSVILCFSLIAHN 60

Query: 61  LVHLLLLARWEDTPLVILGVVAGALIADFLSGLVHWGADTWGSVELPIVGKAFIRPFREH 120
           LVHLLLLARWEDTPLVILGVVAGALIADFLSGLVHWGADTWGSVELPIVGKAFIRPFREH
Sbjct: 61  LVHLLLLARWEDTPLVILGVVAGALIADFLSGLVHWGADTWGSVELPIVGKAFIRPFREH 120

Query: 121 HIDPTAITRHDFIETNGDNCLVTLLPLLNMAYKFRTHSPEALEQLYPWECFVFCLIIFGT 180
           HIDPTAITRHDFIETNGDNCLVTLLPLLNMAYKFRTHSPEALEQLYPWECFVFCLIIFGT
Sbjct: 121 HIDPTAITRHDFIETNGDNCLVTLLPLLNMAYKFRTHSPEALEQLYPWECFVFCLIIFGT 180

Query: 181 FTNQIHKWSHTYFGLPRWVTLLQDWHVILPRKHHRIHHVSPHETYFCITTG-VKVPRN-- 237
           FTNQIHKWSHTYFGLPRWVTLLQDWHVILPRKHHRIHHVSPHETYFCITTG +  P    
Sbjct: 181 FTNQIHKWSHTYFGLPRWVTLLQDWHVILPRKHHRIHHVSPHETYFCITTGWLNYPLEKI 240

Query: 238 --FRLLEELEEGQKG 250
             +R LE+L +G  G
Sbjct: 241 GFWRRLEDLIQGLTG 255


>gi|241982751 transmembrane protein 189 isoform 2 [Homo sapiens]
          Length = 267

 Score =  490 bits (1262), Expect = e-139
 Identities = 235/255 (92%), Positives = 239/255 (93%), Gaps = 8/255 (3%)

Query: 1   MAGAEDWPGQQLELDEDEASCCRWGAQHAGARELAALYSPGKRLQEWCSVILCFSLIAHN 60
           MAGAEDWPGQQLELDEDEASCCRWGAQHAGARELAALYSPGKRLQEWCSVILCFSLIAHN
Sbjct: 1   MAGAEDWPGQQLELDEDEASCCRWGAQHAGARELAALYSPGKRLQEWCSVILCFSLIAHN 60

Query: 61  LVHLLLLARWEDTPLVILGVVAGALIADFLSGLVHWGADTWGSVELPIVGKAFIRPFREH 120
           LVHLLLLARWEDTPLVILGVVAGALIADFLSGLVHWGADTWGSVELPI   AFIRPFREH
Sbjct: 61  LVHLLLLARWEDTPLVILGVVAGALIADFLSGLVHWGADTWGSVELPI---AFIRPFREH 117

Query: 121 HIDPTAITRHDFIETNGDNCLVTLLPLLNMAYKFRTHSPEALEQLYPWECFVFCLIIFGT 180
           HIDPTAITRHDFIETNGDNCLVTLLPLLNMAYKFRTHSPEALEQLYPWECFVFCLIIFGT
Sbjct: 118 HIDPTAITRHDFIETNGDNCLVTLLPLLNMAYKFRTHSPEALEQLYPWECFVFCLIIFGT 177

Query: 181 FTNQIHKWSHTYFGLPRWVTLLQDWHVILPRKHHRIHHVSPHETYFCITTG-VKVPRN-- 237
           FTNQIHKWSHTYFGLPRWVTLLQDWHVILPRKHHRIHHVSPHETYFCITTG +  P    
Sbjct: 178 FTNQIHKWSHTYFGLPRWVTLLQDWHVILPRKHHRIHHVSPHETYFCITTGWLNYPLEKI 237

Query: 238 --FRLLEELEEGQKG 250
             +R LE+L +G  G
Sbjct: 238 GFWRRLEDLIQGLTG 252


>gi|73765546 ubiquitin-conjugating enzyme E2 variant 1 isoform d
           [Homo sapiens]
          Length = 147

 Score =  291 bits (745), Expect = 6e-79
 Identities = 140/141 (99%), Positives = 141/141 (100%)

Query: 230 TGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYS 289
           +GVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYS
Sbjct: 7   SGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYS 66

Query: 290 LKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRR 349
           LKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRR
Sbjct: 67  LKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRR 126

Query: 350 LMMSKENMKLPQPPEGQCYSN 370
           LMMSKENMKLPQPPEGQCYSN
Sbjct: 127 LMMSKENMKLPQPPEGQCYSN 147


>gi|40806164 ubiquitin-conjugating enzyme E2 variant 1 isoform a
           [Homo sapiens]
          Length = 170

 Score =  291 bits (744), Expect = 8e-79
 Identities = 140/140 (100%), Positives = 140/140 (100%)

Query: 231 GVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSL 290
           GVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSL
Sbjct: 31  GVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSL 90

Query: 291 KIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRL 350
           KIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRL
Sbjct: 91  KIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRL 150

Query: 351 MMSKENMKLPQPPEGQCYSN 370
           MMSKENMKLPQPPEGQCYSN
Sbjct: 151 MMSKENMKLPQPPEGQCYSN 170


>gi|40806167 ubiquitin-conjugating enzyme E2 variant 1 isoform a
           [Homo sapiens]
          Length = 170

 Score =  291 bits (744), Expect = 8e-79
 Identities = 140/140 (100%), Positives = 140/140 (100%)

Query: 231 GVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSL 290
           GVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSL
Sbjct: 31  GVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSL 90

Query: 291 KIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRL 350
           KIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRL
Sbjct: 91  KIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRL 150

Query: 351 MMSKENMKLPQPPEGQCYSN 370
           MMSKENMKLPQPPEGQCYSN
Sbjct: 151 MMSKENMKLPQPPEGQCYSN 170


>gi|4507797 ubiquitin-conjugating enzyme E2v2 [Homo sapiens]
          Length = 145

 Score =  272 bits (696), Expect = 3e-73
 Identities = 129/143 (90%), Positives = 138/143 (96%)

Query: 228 ITTGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRI 287
           ++TGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRT YENRI
Sbjct: 3   VSTGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRI 62

Query: 288 YSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQEL 347
           YSLK+ECGPKYPEAPP VRFVTKINMNG+N+S+G+VD R+I VLAKWQNSYSIKVVLQEL
Sbjct: 63  YSLKVECGPKYPEAPPSVRFVTKINMNGINNSSGMVDARSIPVLAKWQNSYSIKVVLQEL 122

Query: 348 RRLMMSKENMKLPQPPEGQCYSN 370
           RRLMMSKENMKLPQPPEGQ Y+N
Sbjct: 123 RRLMMSKENMKLPQPPEGQTYNN 145


>gi|12025663 ubiquitin-conjugating enzyme E2 variant 1 isoform c
           [Homo sapiens]
          Length = 103

 Score =  189 bits (481), Expect = 3e-48
 Identities = 94/107 (87%), Positives = 97/107 (90%), Gaps = 6/107 (5%)

Query: 264 EDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVV 323
           ED+ L  +T       +TIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVV
Sbjct: 3   EDLNLENFTA------KTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVV 56

Query: 324 DPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQCYSN 370
           DPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQCYSN
Sbjct: 57  DPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQCYSN 103


>gi|163660385 ubiquitin-conjugating enzyme E2K isoform 2 [Homo
           sapiens]
          Length = 157

 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 8/107 (7%)

Query: 265 DMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVD 324
           D   T   G I GPP T YE   Y L+I+    YP  PP VRF+TKI    ++S  G + 
Sbjct: 33  DENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAI- 91

Query: 325 PRAISVLA-KWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQCYSN 370
              + +L  +W  + +++ VL  L+ L+ + E    P  P+    +N
Sbjct: 92  --CLDILKDQWAAAMTLRTVLLSLQALLAAAE----PDDPQDAVVAN 132


>gi|4885417 ubiquitin-conjugating enzyme E2K isoform 1 [Homo
           sapiens]
          Length = 200

 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 8/107 (7%)

Query: 265 DMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVD 324
           D   T   G I GPP T YE   Y L+I+    YP  PP VRF+TKI    ++S  G + 
Sbjct: 33  DENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAI- 91

Query: 325 PRAISVLA-KWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQCYSN 370
              + +L  +W  + +++ VL  L+ L+ + E    P  P+    +N
Sbjct: 92  --CLDILKDQWAAAMTLRTVLLSLQALLAAAE----PDDPQDAVVAN 132


>gi|13489085 ubiquitin-conjugating enzyme E2G 1 [Homo sapiens]
          Length = 170

 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 3/83 (3%)

Query: 240 LLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYP 299
           L  +L E  K   +G  S GL DD D  L RW  +IIGPP T+YE  ++   +     YP
Sbjct: 10  LRRQLAELNKNPVEG-FSAGLIDDND--LYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYP 66

Query: 300 EAPPFVRFVTKINMNGVNSSNGV 322
             PP ++F+T+I    V+ +  V
Sbjct: 67  LRPPKMKFITEIWHPNVDKNGDV 89


>gi|32967280 ubiquitin-conjugating enzyme E2A isoform 1 [Homo
           sapiens]
          Length = 152

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 9/121 (7%)

Query: 232 VKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLK 291
           +  P   RL+ + +  Q+    G VS    ++  M    W  +I GP  T +E+  + L 
Sbjct: 1   MSTPARRRLMRDFKRLQEDPPAG-VSGAPSENNIMV---WNAVIFGPEGTPFEDGTFKLT 56

Query: 292 IECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLA-KWQNSYSIKVVLQELRRL 350
           IE   +YP  PP VRFV+K+    V +   +     + +L  +W  +Y +  +L  ++ L
Sbjct: 57  IEFTEEYPNKPPTVRFVSKMFHPNVYADGSI----CLDILQNRWSPTYDVSSILTSIQSL 112

Query: 351 M 351
           +
Sbjct: 113 L 113


>gi|4507771 ubiquitin-conjugating enzyme E2B [Homo sapiens]
          Length = 152

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 29/121 (23%), Positives = 57/121 (47%), Gaps = 9/121 (7%)

Query: 232 VKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLK 291
           +  P   RL+ + +  Q+    G      E++    + +W  +I GP  T +E+  + L 
Sbjct: 1   MSTPARRRLMRDFKRLQEDPPVGVSGAPSENN----IMQWNAVIFGPEGTPFEDGTFKLV 56

Query: 292 IECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLA-KWQNSYSIKVVLQELRRL 350
           IE   +YP  PP VRF++K+    V +   +     + +L  +W  +Y +  +L  ++ L
Sbjct: 57  IEFSEEYPNKPPTVRFLSKMFHPNVYADGSI----CLDILQNRWSPTYDVSSILTSIQSL 112

Query: 351 M 351
           +
Sbjct: 113 L 113


>gi|22749327 ubiquitin-conjugating enzyme E2E 2 [Homo sapiens]
          Length = 201

 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 5/82 (6%)

Query: 271 WTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISV 330
           W   I+GPP ++YE  ++ L I   P YP  PP V F T+I    +N S GV+    + +
Sbjct: 87  WRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNIN-SQGVI---CLDI 142

Query: 331 LA-KWQNSYSIKVVLQELRRLM 351
           L   W  + +I  VL  +  L+
Sbjct: 143 LKDNWSPALTISKVLLSICSLL 164


>gi|33359691 ubiquitin-conjugating enzyme E2E 1 isoform 2 [Homo
           sapiens]
          Length = 176

 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 5/82 (6%)

Query: 271 WTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISV 330
           W   I+GPP ++YE  ++ L I   P+YP  PP V F T+I    +N S GV+    + +
Sbjct: 62  WRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNIN-SQGVI---CLDI 117

Query: 331 LA-KWQNSYSIKVVLQELRRLM 351
           L   W  + +I  VL  +  L+
Sbjct: 118 LKDNWSPALTISKVLLSICSLL 139


>gi|4507779 ubiquitin-conjugating enzyme E2E 1 isoform 1 [Homo
           sapiens]
          Length = 193

 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 5/82 (6%)

Query: 271 WTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISV 330
           W   I+GPP ++YE  ++ L I   P+YP  PP V F T+I    +N S GV+    + +
Sbjct: 79  WRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNIN-SQGVI---CLDI 134

Query: 331 LA-KWQNSYSIKVVLQELRRLM 351
           L   W  + +I  VL  +  L+
Sbjct: 135 LKDNWSPALTISKVLLSICSLL 156


>gi|4507773 ubiquitin-conjugating enzyme E2D 1 [Homo sapiens]
          Length = 147

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 9/114 (7%)

Query: 239 RLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKY 298
           R+ +EL + Q+       +  + DD    L  W   I+GPP + Y+  ++ L +     Y
Sbjct: 5   RIQKELSDLQRDPPAHCSAGPVGDD----LFHWQATIMGPPDSAYQGGVFFLTVHFPTDY 60

Query: 299 PEAPPFVRFVTKINMNGVNSSNGVVDPRAISVL-AKWQNSYSIKVVLQELRRLM 351
           P  PP + F TKI    +NS+  +     + +L ++W  + ++  VL  +  L+
Sbjct: 61  PFKPPKIAFTTKIYHPNINSNGSI----CLDILRSQWSPALTVSKVLLSICSLL 110


>gi|5902146 ubiquitin-conjugating enzyme E2C isoform 1 [Homo
           sapiens]
          Length = 179

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 8/101 (7%)

Query: 252 GDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKI 311
           GD  +S   E D    L +W G I G   T+YE+  Y L +E    YP   P V+F+T  
Sbjct: 46  GDKGISAFPESDN---LFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPC 102

Query: 312 NMNGVNSSNGVVDPRAISVL-AKWQNSYSIKVVLQELRRLM 351
               V++   +     + +L  KW   Y ++ +L  ++ L+
Sbjct: 103 YHPNVDTQGNI----CLDILKEKWSALYDVRTILLSIQSLL 139


>gi|32967289 ubiquitin-conjugating enzyme E2C isoform 4 [Homo
           sapiens]
          Length = 140

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 8/101 (7%)

Query: 252 GDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKI 311
           GD  +S   E D    L +W G I G   T+YE+  Y L +E    YP   P V+F+T  
Sbjct: 7   GDKGISAFPESDN---LFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPC 63

Query: 312 NMNGVNSSNGVVDPRAISVL-AKWQNSYSIKVVLQELRRLM 351
               V++   +     + +L  KW   Y ++ +L  ++ L+
Sbjct: 64  YHPNVDTQGNI----CLDILKEKWSALYDVRTILLSIQSLL 100


>gi|32967287 ubiquitin-conjugating enzyme E2C isoform 4 [Homo
           sapiens]
          Length = 140

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 8/101 (7%)

Query: 252 GDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKI 311
           GD  +S   E D    L +W G I G   T+YE+  Y L +E    YP   P V+F+T  
Sbjct: 7   GDKGISAFPESDN---LFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPC 63

Query: 312 NMNGVNSSNGVVDPRAISVL-AKWQNSYSIKVVLQELRRLM 351
               V++   +     + +L  KW   Y ++ +L  ++ L+
Sbjct: 64  YHPNVDTQGNI----CLDILKEKWSALYDVRTILLSIQSLL 100


>gi|7661808 ubiquitin-conjugating enzyme E2T [Homo sapiens]
          Length = 197

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 6/122 (4%)

Query: 236 RNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECG 295
           R  RL  EL         G   W  +D + M   R    I+G   T YE  ++ L++   
Sbjct: 3   RASRLKRELHMLATEPPPGITCW--QDKDQMDDLR--AQILGGANTPYEKGVFKLEVIIP 58

Query: 296 PKYPEAPPFVRFVTKINMNGVNSSNGV-VDPRAISVLAKWQNSYSIKVVLQELRRLMMSK 354
            +YP  PP +RF+T I    ++S+  + +D   +     W+ S +I  VL  + +L+MS+
Sbjct: 59  ERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATVLTSI-QLLMSE 117

Query: 355 EN 356
            N
Sbjct: 118 PN 119


>gi|33359694 ubiquitin-conjugating enzyme E2E 3 [Homo sapiens]
          Length = 207

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 5/82 (6%)

Query: 271 WTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISV 330
           W   I+GPP ++YE  ++ L I     YP  PP V F T+I    +N S GV+    + +
Sbjct: 93  WRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNIN-SQGVI---CLDI 148

Query: 331 LA-KWQNSYSIKVVLQELRRLM 351
           L   W  + +I  VL  +  L+
Sbjct: 149 LKDNWSPALTISKVLLSICSLL 170


>gi|5454146 ubiquitin-conjugating enzyme E2E 3 [Homo sapiens]
          Length = 207

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 5/82 (6%)

Query: 271 WTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISV 330
           W   I+GPP ++YE  ++ L I     YP  PP V F T+I    +N S GV+    + +
Sbjct: 93  WRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNIN-SQGVI---CLDI 148

Query: 331 LA-KWQNSYSIKVVLQELRRLM 351
           L   W  + +I  VL  +  L+
Sbjct: 149 LKDNWSPALTISKVLLSICSLL 170


>gi|22212943 ubiquitin-conjugating enzyme UBC3B [Homo sapiens]
          Length = 238

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 2/52 (3%)

Query: 260 LEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKI 311
           L D+ D  L  W   I GPP T+YE   +   I+    YP +PP  RF+TK+
Sbjct: 32  LVDESD--LYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKM 81


>gi|8393719 ubiquitin-conjugating enzyme E2D 4 (putative) [Homo
           sapiens]
          Length = 147

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 5/85 (5%)

Query: 268 LTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRA 327
           L  W   I+GP  + Y+  ++ L I     YP  PP V F TKI    +NS+  +     
Sbjct: 30  LFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTKIYHPNINSNGSI----C 85

Query: 328 ISVL-AKWQNSYSIKVVLQELRRLM 351
           + +L ++W  + ++  VL  +  L+
Sbjct: 86  LDILRSQWSPALTVSKVLLSICSLL 110


>gi|16357477 ubiquitin-conjugating enzyme Cdc34 [Homo sapiens]
          Length = 236

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 2/52 (3%)

Query: 260 LEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKI 311
           L D+ D  L  W   I GPP T YE   +  +++    YP +PP  RF+TK+
Sbjct: 32  LVDEGD--LYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKM 81


>gi|4759282 ubiquitin-conjugating enzyme E2L 6 isoform 1 [Homo
           sapiens]
          Length = 153

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 30/124 (24%), Positives = 61/124 (49%), Gaps = 7/124 (5%)

Query: 237 NFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGP 296
           + R+++ELE+ QK       +      +D  +  W  +++ P +  Y  + ++L+I   P
Sbjct: 4   SMRVVKELEDLQKKPPPYLRNLS---SDDANVLVWHALLL-PDQPPYHLKAFNLRISFPP 59

Query: 297 KYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKEN 356
           +YP  PP ++F TKI    V+ +  +  P  I     W+       VL+ L  +++++ N
Sbjct: 60  EYPFKPPMIKFTTKIYHPNVDENGQICLP--IISSENWKPCTKTCQVLEAL-NVLVNRPN 116

Query: 357 MKLP 360
           ++ P
Sbjct: 117 IREP 120


>gi|33188456 ubiquitin-conjugating enzyme E2D 2 isoform 2 [Homo
           sapiens]
          Length = 118

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 5/82 (6%)

Query: 271 WTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISV 330
           W   I+GP  + Y+  ++ L I     YP  PP V F T+I    +NS+  +     + +
Sbjct: 4   WQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI----CLDI 59

Query: 331 L-AKWQNSYSIKVVLQELRRLM 351
           L ++W  + +I  VL  +  L+
Sbjct: 60  LRSQWSPALTISKVLLSICSLL 81


>gi|4507775 ubiquitin-conjugating enzyme E2D 2 isoform 1 [Homo
           sapiens]
          Length = 147

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 5/82 (6%)

Query: 271 WTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISV 330
           W   I+GP  + Y+  ++ L I     YP  PP V F T+I    +NS+  +     + +
Sbjct: 33  WQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI----CLDI 88

Query: 331 L-AKWQNSYSIKVVLQELRRLM 351
           L ++W  + +I  VL  +  L+
Sbjct: 89  LRSQWSPALTISKVLLSICSLL 110


>gi|33149324 ubiquitin-conjugating enzyme E2D 3 isoform 3 [Homo
           sapiens]
          Length = 149

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 5/82 (6%)

Query: 271 WTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISV 330
           W   I+GP  + Y+  ++ L I     YP  PP V F T+I    +NS+  +     + +
Sbjct: 35  WQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI----CLDI 90

Query: 331 L-AKWQNSYSIKVVLQELRRLM 351
           L ++W  + +I  VL  +  L+
Sbjct: 91  LRSQWSPALTISKVLLSICSLL 112


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.139    0.461 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,176,093
Number of Sequences: 37866
Number of extensions: 754852
Number of successful extensions: 1458
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1403
Number of HSP's gapped (non-prelim): 62
length of query: 370
length of database: 18,247,518
effective HSP length: 104
effective length of query: 266
effective length of database: 14,309,454
effective search space: 3806314764
effective search space used: 3806314764
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.