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Search of human proteins with 40255178
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|40255178 tudor domain containing 5 [Homo sapiens]
(981 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|40255178 tudor domain containing 5 [Homo sapiens] 1966 0.0
gi|112293287 tudor domain containing 7 [Homo sapiens] 92 3e-18
gi|145312259 tudor and KH domain containing isoform a [Homo sapi... 84 8e-16
gi|145312246 tudor and KH domain containing isoform b [Homo sapi... 84 8e-16
gi|145312270 tudor and KH domain containing isoform a [Homo sapi... 84 8e-16
gi|145312256 tudor and KH domain containing isoform a [Homo sapi... 84 8e-16
gi|38505161 tudor domain containing 1 [Homo sapiens] 80 7e-15
gi|169163653 PREDICTED: similar to tudor domain containing 1 [Ho... 79 2e-14
gi|169164192 PREDICTED: similar to tudor domain containing 1 [Ho... 79 2e-14
gi|169163210 PREDICTED: similar to tudor domain containing 1 [Ho... 79 2e-14
gi|58197558 tudor domain containing 6 [Homo sapiens] 69 2e-11
gi|94421471 ring finger protein 17 [Homo sapiens] 55 3e-07
gi|166851804 tudor domain containing 9 [Homo sapiens] 46 1e-04
gi|4502015 A-kinase anchor protein 1 precursor [Homo sapiens] 46 2e-04
gi|77404397 staphylococcal nuclease domain containing 1 [Homo sa... 44 6e-04
gi|85797660 limkain b1 [Homo sapiens] 39 0.031
gi|161016765 tudor domain containing 12 [Homo sapiens] 36 0.15
gi|94421473 paternally expressed 10 isoform RF1 [Homo sapiens] 33 1.0
gi|94421475 paternally expressed 10 isoform RF1/2 [Homo sapiens] 33 1.0
gi|117606360 ADP-ribosylation factor guanine nucleotide factor 6... 33 1.3
gi|46255064 synaptotagmin-like 2 isoform d [Homo sapiens] 33 1.7
gi|82830424 gon-4-like isoform a [Homo sapiens] 33 1.7
gi|170784859 serine/threonine kinase 31 isoform b [Homo sapiens] 33 1.7
gi|14602443 serine/threonine kinase 31 isoform a [Homo sapiens] 33 1.7
gi|170784856 serine/threonine kinase 31 isoform b [Homo sapiens] 33 1.7
gi|45827771 autoantigen RCD8 [Homo sapiens] 33 1.7
gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens] 32 2.2
gi|87299628 biorientation of chromosomes in cell division 1-like... 32 2.2
gi|55769554 protein tyrosine phosphatase, receptor type, f polyp... 32 2.2
gi|160707881 formin 2 [Homo sapiens] 32 2.9
>gi|40255178 tudor domain containing 5 [Homo sapiens]
Length = 981
Score = 1966 bits (5093), Expect = 0.0
Identities = 981/981 (100%), Positives = 981/981 (100%)
Query: 1 MSEQERIQECLRKEIRSLLISTKDGLSPQELEKEYLLMVGNHLPLRILGYRSTMELVLDM 60
MSEQERIQECLRKEIRSLLISTKDGLSPQELEKEYLLMVGNHLPLRILGYRSTMELVLDM
Sbjct: 1 MSEQERIQECLRKEIRSLLISTKDGLSPQELEKEYLLMVGNHLPLRILGYRSTMELVLDM 60
Query: 61 PDVVRVCPGAGGTVILKAIPDESTKGIASLVAKQRSSHKLRNSMHKGRPSIYSGPRSHRR 120
PDVVRVCPGAGGTVILKAIPDESTKGIASLVAKQRSSHKLRNSMHKGRPSIYSGPRSHRR
Sbjct: 61 PDVVRVCPGAGGTVILKAIPDESTKGIASLVAKQRSSHKLRNSMHKGRPSIYSGPRSHRR 120
Query: 121 VPYRGRVAPILPAVVKSELKDLLALSPVLLSDFEKAFAKRFGRSFQYMQYGFLSMFEVLN 180
VPYRGRVAPILPAVVKSELKDLLALSPVLLSDFEKAFAKRFGRSFQYMQYGFLSMFEVLN
Sbjct: 121 VPYRGRVAPILPAVVKSELKDLLALSPVLLSDFEKAFAKRFGRSFQYMQYGFLSMFEVLN 180
Query: 181 AASDVISVEQTRAGSLLMLKKSVTEEKPRGCPAGKIFTQPFRMKQGSYSTGFPVAKPCFS 240
AASDVISVEQTRAGSLLMLKKSVTEEKPRGCPAGKIFTQPFRMKQGSYSTGFPVAKPCFS
Sbjct: 181 AASDVISVEQTRAGSLLMLKKSVTEEKPRGCPAGKIFTQPFRMKQGSYSTGFPVAKPCFS 240
Query: 241 QPTSNMEPPKQIMSMEKTSKLNVVETSRLNHTEKLNQLENTFKSVIAQIGPGGTISSELK 300
QPTSNMEPPKQIMSMEKTSKLNVVETSRLNHTEKLNQLENTFKSVIAQIGPGGTISSELK
Sbjct: 241 QPTSNMEPPKQIMSMEKTSKLNVVETSRLNHTEKLNQLENTFKSVIAQIGPGGTISSELK 300
Query: 301 HKIKFVVSKFPEGLFISKLLGEYEVIFKEQLSPKKLGFLNVTELVGALSDILHVEFRKGH 360
HKIKFVVSKFPEGLFISKLLGEYEVIFKEQLSPKKLGFLNVTELVGALSDILHVEFRKGH
Sbjct: 301 HKIKFVVSKFPEGLFISKLLGEYEVIFKEQLSPKKLGFLNVTELVGALSDILHVEFRKGH 360
Query: 361 QDLLVFDADKKPLPPVQSDKKIEAKACVSSPPRNSLSTAAVKETVWNCPSKKQKEPQQKI 420
QDLLVFDADKKPLPPVQSDKKIEAKACVSSPPRNSLSTAAVKETVWNCPSKKQKEPQQKI
Sbjct: 361 QDLLVFDADKKPLPPVQSDKKIEAKACVSSPPRNSLSTAAVKETVWNCPSKKQKEPQQKI 420
Query: 421 CKKPNLVVKPLQLQVETNKSELNLAMANHDIPPDAVPNKKLCRLPPLDTSSLIGVFVEYI 480
CKKPNLVVKPLQLQVETNKSELNLAMANHDIPPDAVPNKKLCRLPPLDTSSLIGVFVEYI
Sbjct: 421 CKKPNLVVKPLQLQVETNKSELNLAMANHDIPPDAVPNKKLCRLPPLDTSSLIGVFVEYI 480
Query: 481 ISPSQFYIRIYSRDSSELLEDMMIEMRRCYSNQLVSDRYVMPECFIQPGHLCCVRISEDK 540
ISPSQFYIRIYSRDSSELLEDMMIEMRRCYSNQLVSDRYVMPECFIQPGHLCCVRISEDK
Sbjct: 481 ISPSQFYIRIYSRDSSELLEDMMIEMRRCYSNQLVSDRYVMPECFIQPGHLCCVRISEDK 540
Query: 541 WWYRVIIHRVLEKQEVEVFYPDFGNIGIVQKSSLRFLKCCYTKLPAQAIPCSLAWVRPVE 600
WWYRVIIHRVLEKQEVEVFYPDFGNIGIVQKSSLRFLKCCYTKLPAQAIPCSLAWVRPVE
Sbjct: 541 WWYRVIIHRVLEKQEVEVFYPDFGNIGIVQKSSLRFLKCCYTKLPAQAIPCSLAWVRPVE 600
Query: 601 EHWTSKAILQFQKLCGLKPLVGVVDEYVDGILNIFLCDTSSNEDVYFHHVLRTEGHAIVC 660
EHWTSKAILQFQKLCGLKPLVGVVDEYVDGILNIFLCDTSSNEDVYFHHVLRTEGHAIVC
Sbjct: 601 EHWTSKAILQFQKLCGLKPLVGVVDEYVDGILNIFLCDTSSNEDVYFHHVLRTEGHAIVC 660
Query: 661 RENISSKGFSELNPLALYTTSSGGPEDIVLTELGYPSQQHYFNEDRKISPQSKESELRIL 720
RENISSKGFSELNPLALYTTSSGGPEDIVLTELGYPSQQHYFNEDRKISPQSKESELRIL
Sbjct: 661 RENISSKGFSELNPLALYTTSSGGPEDIVLTELGYPSQQHYFNEDRKISPQSKESELRIL 720
Query: 721 DEIPTGMPCLESVTIGDDIWDENWLPLQAKMGKGGDAASHLFTASLGGKNQYSSCKEMPQ 780
DEIPTGMPCLESVTIGDDIWDENWLPLQAKMGKGGDAASHLFTASLGGKNQYSSCKEMPQ
Sbjct: 721 DEIPTGMPCLESVTIGDDIWDENWLPLQAKMGKGGDAASHLFTASLGGKNQYSSCKEMPQ 780
Query: 781 KDWCFSTPKDTWDDSWQPSGLVNGTKVEVHKPEVLGAQEKNTGTNRTQKQLDINGSSDSS 840
KDWCFSTPKDTWDDSWQPSGLVNGTKVEVHKPEVLGAQEKNTGTNRTQKQLDINGSSDSS
Sbjct: 781 KDWCFSTPKDTWDDSWQPSGLVNGTKVEVHKPEVLGAQEKNTGTNRTQKQLDINGSSDSS 840
Query: 841 TLPKLEEFCTSLTQSEQSADGSQSEPNNSQTQPKQIQLSTAAPCSTTAVDDSAEKPSGSV 900
TLPKLEEFCTSLTQSEQSADGSQSEPNNSQTQPKQIQLSTAAPCSTTAVDDSAEKPSGSV
Sbjct: 841 TLPKLEEFCTSLTQSEQSADGSQSEPNNSQTQPKQIQLSTAAPCSTTAVDDSAEKPSGSV 900
Query: 901 ESSPEILKNEDFSSSRAITLYKDKRQESVDQLSLILSYECQISQKLYIPRSTATAALGAA 960
ESSPEILKNEDFSSSRAITLYKDKRQESVDQLSLILSYECQISQKLYIPRSTATAALGAA
Sbjct: 901 ESSPEILKNEDFSSSRAITLYKDKRQESVDQLSLILSYECQISQKLYIPRSTATAALGAA 960
Query: 961 ARLATSRSLLHWYPSVKRMEA 981
ARLATSRSLLHWYPSVKRMEA
Sbjct: 961 ARLATSRSLLHWYPSVKRMEA 981
>gi|112293287 tudor domain containing 7 [Homo sapiens]
Length = 1098
Score = 91.7 bits (226), Expect = 3e-18
Identities = 165/710 (23%), Positives = 279/710 (39%), Gaps = 159/710 (22%)
Query: 9 ECLRKEIRSLLISTKDGLSPQELEKEYLLMVGNHLPLRILGYRSTMELVLDMPDVVRVCP 68
+ + K +R++L S K+G++ L+ EY + G+ +P + LG+ + + +P VVR+
Sbjct: 5 DLVSKMLRAVLQSHKNGVALPRLQGEYRSLTGDWIPFKQLGFPTLEAYLRSVPAVVRIET 64
Query: 69 GAGGTVILKAIPDESTKGIASLVAKQRSSHKLRNSMHKGRPSIYSGPRSHRRVPYRGRVA 128
G + A+ T IA LVA+QRSS + ++ R+V + RV
Sbjct: 65 SRSGEITCYAMACTETARIAQLVARQRSSKR----------------KTGRQVNCQMRVK 108
Query: 129 PILPAVVKSELKDLLALSPVLLSDFEKAFAKRFGRSFQYMQYGFLSMFEV--------LN 180
+P ++ + K L Q GF S F V L
Sbjct: 109 KTMPFFLEGKPKATLR------------------------QPGFASNFSVGKKPNPAPLR 144
Query: 181 AASDVISVEQTRAGSLLMLKKSVTEEKPRGCPAGKIFTQPFRMKQGSYSTGFPVAKPCFS 240
+ + V+ S ML ++ E + P + T + FS
Sbjct: 145 DKGNSVGVKPDAEMSPYMLHTTLGNEAFKDIPVQRHVTMSTNNR--------------FS 190
Query: 241 QPTSNMEPPKQIMSMEKTSKLNVVETSRLNHT-EKLN---QLENTFKSVIAQIGPGGTIS 296
P ++++PP Q M + +TS + + LN T EK N T+K
Sbjct: 191 -PKASLQPPLQ-MHLSRTSTKEM--SDNLNQTVEKPNVKPPASYTYKM------------ 234
Query: 297 SELKHKIKFVVSKFPEGLFISKLLGEYEVIFKEQLSPKKLGFLNVTELVGALSDILHVEF 356
E++++IK +++K G++ISKL Y+ ++KE L+ G L E I VE
Sbjct: 235 DEVQNRIKEILNKHNNGIWISKLPHFYKELYKEDLNQ---GILQQFE---HWPHICTVEK 288
Query: 357 R-KGHQDLLVF------------DADKKPLPPVQSDKKIEA-KAC---VSSPPRNSLSTA 399
G QDLL++ D +K PL P+ K+ K C ++ + ++
Sbjct: 289 PCSGGQDLLLYPAKRKQLLRSELDTEKVPLSPLPGPKQTPPLKGCPTVMAGDFKEKVADL 348
Query: 400 AVKET--VWNCPSKKQKEPQQKICKKPNLVVKPL-----------------------QLQ 434
VK T +W K E K+ K P +K L +L
Sbjct: 349 LVKYTSGLWASALPKAFEEMYKV-KFPEDALKNLASLSDVCSIDYISGNPQKAILYAKLP 407
Query: 435 VETNKSELNLAMANHDIPPDAVPNKKLCRL-----------------PPL--DTSSLIGV 475
+ T+K + + A+ D A+ ++ ++ PPL T + V
Sbjct: 408 LPTDKIQKDAGQAHGDNDIKAMVEQEYLQVEESIAESANTFMEDITVPPLMIPTEASPSV 467
Query: 476 FVEYIISPSQFYIRIYSRDSSELLEDMMIEMRRCYSNQLVSDRYVMPECFIQPGHLCCVR 535
V + + ++ IR +D S E M EM+ YS + + P + G L V
Sbjct: 468 LVVELSNTNEVVIRYVGKDYSAAQELMEDEMKEYYSK----NPKITPVQAVNVGQLLAVN 523
Query: 536 ISEDKWWYRVIIHRVLEKQEVEVFYPDFGNIGIVQKSSLRFLKCCYTKLPAQAIPCSLAW 595
ED W +I E+ +++V Y D+G V+KS L + L QA C LA
Sbjct: 524 AEEDAWLRAQVIST--EENKIKVCYVDYGFSENVEKSKAYKLNPKFCSLSFQATKCKLAG 581
Query: 596 VRPVEEHWTSKAILQFQKLCGLKPLVGVVDEYVDGILNIFLCDTSSNEDV 645
+ + + +++ CG V ++D+ I + L DTS +D+
Sbjct: 582 LEVLSDDPDLVKVVE-SLTCGKIFAVEILDK--ADIPLVVLYDTSGEDDI 628
Score = 48.5 bits (114), Expect = 3e-05
Identities = 48/181 (26%), Positives = 85/181 (46%), Gaps = 19/181 (10%)
Query: 475 VFVEYIISPSQFYIRIYSRDSSELLEDMMIEMRRCYSNQLVSDRYVMPECFIQPGHLCCV 534
V+V P F I+ + LE +M EM YS + +R++ ++ +
Sbjct: 916 VYVPVACHPGYFVIQPWQEIHK--LEVLMEEMILYYS--VSEERHIA----VEKDQVYAA 967
Query: 535 RISEDKWWYRVIIHRVLEKQEVEVFYPDFGNIGIVQKSSLRFLKCCYTKLPAQAIPCSLA 594
++ E+KW +RV++ +L V V+ D+G +V ++ L + KLP QA+ LA
Sbjct: 968 KV-ENKW-HRVLLKGILTNGLVSVYELDYGKHELVNIRKVQPLVDMFRKLPFQAVTAQLA 1025
Query: 595 WVRPVEEHWTSKAILQFQKLCGLKPLVGVVDEYV------DGILNIFLCDTS-SNEDVYF 647
V+ W+ +A + F+ KPLV +V + D + ++L DTS + D +
Sbjct: 1026 GVKC--NQWSEEASMVFRNHVEKKPLVALVQTVIENANPWDRKVVVYLVDTSLPDTDTWI 1083
Query: 648 H 648
H
Sbjct: 1084 H 1084
Score = 36.6 bits (83), Expect = 0.12
Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 18/132 (13%)
Query: 518 RYVMPECFIQP---GHLCCVRISEDKWWYRVIIHRVLEKQEVEVFYPDFGNIGIVQKSSL 574
+++ ECF+ G +C W RV I V + ++V + D G + V+ S L
Sbjct: 693 KHMTSECFVSLPFCGKICLFHCKGK--WLRVEITNVHSSRALDVQFLDSGTVTSVKVSEL 750
Query: 575 RFLKCCYTK----LPAQAIPCSLAWVRPVEEHWTSKAILQFQKL------CGLKPLVGVV 624
R + + + +P QAI C LA + WT A+L + C +K V V
Sbjct: 751 REIPPRFLQEMIAIPPQAIKCCLADLPQSIGMWTPDAVLWLRDSVLNCSDCSIK--VTKV 808
Query: 625 DEYVDGILNIFL 636
DE GI +++L
Sbjct: 809 DE-TRGIAHVYL 819
>gi|145312259 tudor and KH domain containing isoform a [Homo
sapiens]
Length = 561
Score = 83.6 bits (205), Expect = 8e-16
Identities = 65/221 (29%), Positives = 106/221 (47%), Gaps = 18/221 (8%)
Query: 455 AVPNKKLCRLPPLDTSSLIGVFVEYIIS----PSQFYIRIYSRDSSELLEDMMIEMRRCY 510
A+P + +P D S ++E +S P+ F+I+I S +L + ++ EM + Y
Sbjct: 286 AIPEMPMFEIPSPDFSFHADEYLEVYVSASEHPNHFWIQIVGSRSLQL-DKLVNEMTQHY 344
Query: 511 SNQLVSDRYVMPECFIQPGHLCCVRISEDKWWYRVIIHRVLEKQEVEVFYPDFGNIGIVQ 570
N + D V G + + + WYR + LE +++++ DFG+ G
Sbjct: 345 ENSVPEDLTV------HVGDIVAAPLPTNGSWYRARVLGTLENGNLDLYFVDFGDNGDCP 398
Query: 571 KSSLRFLKCCYTKLPAQAIPCSLAWVRPVEEHWTSKAILQFQKL---CGLKPLVGVVDEY 627
LR L+ + LP QAI CSLA + P + W +A+ +F +L KPLV + Y
Sbjct: 399 LKDLRALRSDFLSLPFQAIECSLARIAPSGDQWEEEALDEFDRLTHCADWKPLVAKISSY 458
Query: 628 VD-GIL---NIFLCDTSSNEDVYFHHVLRTEGHAIVCRENI 664
V GI I+L DTS+ + + L +G+AI E+I
Sbjct: 459 VQTGISTWPKIYLYDTSNGKKLDIGLELVHKGYAIELPEDI 499
>gi|145312246 tudor and KH domain containing isoform b [Homo
sapiens]
Length = 516
Score = 83.6 bits (205), Expect = 8e-16
Identities = 65/221 (29%), Positives = 106/221 (47%), Gaps = 18/221 (8%)
Query: 455 AVPNKKLCRLPPLDTSSLIGVFVEYIIS----PSQFYIRIYSRDSSELLEDMMIEMRRCY 510
A+P + +P D S ++E +S P+ F+I+I S +L + ++ EM + Y
Sbjct: 241 AIPEMPMFEIPSPDFSFHADEYLEVYVSASEHPNHFWIQIVGSRSLQL-DKLVNEMTQHY 299
Query: 511 SNQLVSDRYVMPECFIQPGHLCCVRISEDKWWYRVIIHRVLEKQEVEVFYPDFGNIGIVQ 570
N + D V G + + + WYR + LE +++++ DFG+ G
Sbjct: 300 ENSVPEDLTV------HVGDIVAAPLPTNGSWYRARVLGTLENGNLDLYFVDFGDNGDCP 353
Query: 571 KSSLRFLKCCYTKLPAQAIPCSLAWVRPVEEHWTSKAILQFQKL---CGLKPLVGVVDEY 627
LR L+ + LP QAI CSLA + P + W +A+ +F +L KPLV + Y
Sbjct: 354 LKDLRALRSDFLSLPFQAIECSLARIAPSGDQWEEEALDEFDRLTHCADWKPLVAKISSY 413
Query: 628 VD-GIL---NIFLCDTSSNEDVYFHHVLRTEGHAIVCRENI 664
V GI I+L DTS+ + + L +G+AI E+I
Sbjct: 414 VQTGISTWPKIYLYDTSNGKKLDIGLELVHKGYAIELPEDI 454
>gi|145312270 tudor and KH domain containing isoform a [Homo
sapiens]
Length = 561
Score = 83.6 bits (205), Expect = 8e-16
Identities = 65/221 (29%), Positives = 106/221 (47%), Gaps = 18/221 (8%)
Query: 455 AVPNKKLCRLPPLDTSSLIGVFVEYIIS----PSQFYIRIYSRDSSELLEDMMIEMRRCY 510
A+P + +P D S ++E +S P+ F+I+I S +L + ++ EM + Y
Sbjct: 286 AIPEMPMFEIPSPDFSFHADEYLEVYVSASEHPNHFWIQIVGSRSLQL-DKLVNEMTQHY 344
Query: 511 SNQLVSDRYVMPECFIQPGHLCCVRISEDKWWYRVIIHRVLEKQEVEVFYPDFGNIGIVQ 570
N + D V G + + + WYR + LE +++++ DFG+ G
Sbjct: 345 ENSVPEDLTV------HVGDIVAAPLPTNGSWYRARVLGTLENGNLDLYFVDFGDNGDCP 398
Query: 571 KSSLRFLKCCYTKLPAQAIPCSLAWVRPVEEHWTSKAILQFQKL---CGLKPLVGVVDEY 627
LR L+ + LP QAI CSLA + P + W +A+ +F +L KPLV + Y
Sbjct: 399 LKDLRALRSDFLSLPFQAIECSLARIAPSGDQWEEEALDEFDRLTHCADWKPLVAKISSY 458
Query: 628 VD-GIL---NIFLCDTSSNEDVYFHHVLRTEGHAIVCRENI 664
V GI I+L DTS+ + + L +G+AI E+I
Sbjct: 459 VQTGISTWPKIYLYDTSNGKKLDIGLELVHKGYAIELPEDI 499
>gi|145312256 tudor and KH domain containing isoform a [Homo
sapiens]
Length = 561
Score = 83.6 bits (205), Expect = 8e-16
Identities = 65/221 (29%), Positives = 106/221 (47%), Gaps = 18/221 (8%)
Query: 455 AVPNKKLCRLPPLDTSSLIGVFVEYIIS----PSQFYIRIYSRDSSELLEDMMIEMRRCY 510
A+P + +P D S ++E +S P+ F+I+I S +L + ++ EM + Y
Sbjct: 286 AIPEMPMFEIPSPDFSFHADEYLEVYVSASEHPNHFWIQIVGSRSLQL-DKLVNEMTQHY 344
Query: 511 SNQLVSDRYVMPECFIQPGHLCCVRISEDKWWYRVIIHRVLEKQEVEVFYPDFGNIGIVQ 570
N + D V G + + + WYR + LE +++++ DFG+ G
Sbjct: 345 ENSVPEDLTV------HVGDIVAAPLPTNGSWYRARVLGTLENGNLDLYFVDFGDNGDCP 398
Query: 571 KSSLRFLKCCYTKLPAQAIPCSLAWVRPVEEHWTSKAILQFQKL---CGLKPLVGVVDEY 627
LR L+ + LP QAI CSLA + P + W +A+ +F +L KPLV + Y
Sbjct: 399 LKDLRALRSDFLSLPFQAIECSLARIAPSGDQWEEEALDEFDRLTHCADWKPLVAKISSY 458
Query: 628 VD-GIL---NIFLCDTSSNEDVYFHHVLRTEGHAIVCRENI 664
V GI I+L DTS+ + + L +G+AI E+I
Sbjct: 459 VQTGISTWPKIYLYDTSNGKKLDIGLELVHKGYAIELPEDI 499
>gi|38505161 tudor domain containing 1 [Homo sapiens]
Length = 1189
Score = 80.5 bits (197), Expect = 7e-15
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 10/177 (5%)
Query: 467 LDTSSLIGVFVEYIISPSQFYIRIYSRDSSELLEDMMIEMRRCYSNQLVSDRYVMPECF- 525
L + V V I SP +FY + D+ + L D+ + +L P F
Sbjct: 710 LGVDQTVDVVVCVIYSPGEFYCHVLKEDALKKLNDLNKSLAEHCQQKL-------PNGFK 762
Query: 526 IQPGHLCCVRISEDKWWYRVIIHRVLEKQEVEVFYPDFGNIGIVQKSSLRFLKCCYTKLP 585
+ G CC + D WYR ++ +L V+V + D+GNI V LR + + LP
Sbjct: 763 AEIGQPCCAFFAGDGSWYRALVKEILPNGHVKVHFVDYGNIEEVTADELRMISSTFLNLP 822
Query: 586 AQAIPCSLAWVRPVEEHWTSKAILQFQK-LCGLKPLVGVVDEYVDGILNIFLCDTSS 641
Q I C LA ++ +HW+ +AI +FQ + G+K VV+ +GI + L D S+
Sbjct: 823 FQGIRCQLADIQSRNKHWSEEAITRFQMCVAGIKLQARVVEVTENGI-GVELTDLST 878
Score = 68.6 bits (166), Expect = 3e-11
Identities = 77/289 (26%), Positives = 120/289 (41%), Gaps = 34/289 (11%)
Query: 477 VEYIISPSQFYIRIYSRDSSELLEDMMIEMRRCYSNQLVSDRYVMPECFIQPGHLCCVRI 536
V +I +P F+ + S L ++ + + Y +QL P G +CC +
Sbjct: 500 VAHIQTPEDFFCQ--QLQSGRKLAELQASLSK-YCDQLPPRSDFYPAI----GDICCAQF 552
Query: 537 SEDKWWYRVIIHRVLEKQEVEVFYPDFGNIGIVQKSSLRFLKCCYTKLPAQAIPCSLAWV 596
SED WYR + ++ V V Y D+GN I+ L + +LP QAI C LA V
Sbjct: 553 SEDDQWYRASVLAYASEESVLVGYVDYGNFEILSLMRLCPIIPKLLELPMQAIKCVLAGV 612
Query: 597 RPVEEHWTSKAILQFQKLCGLKPL-VGVVDEYVDGILNIFLCDTSSNEDVYFHHVLRTEG 655
+P WT +AI +KL K + V VVD+ + L + L D S V VL G
Sbjct: 613 KPSLGIWTPEAICLMKKLVQNKIITVKVVDKLENSSL-VELIDKSETPHVSVSKVLLDAG 671
Query: 656 HAIVCRENISSKGF------------SELNPLALYTTSSGGPE--DIVLTELGYPSQ--Q 699
A+ + ++ K ++NPL G + D+V+ + P +
Sbjct: 672 FAVGEQSMVTDKPSDVKETSVPLGVEGKVNPLEWTWVELGVDQTVDVVVCVIYSPGEFYC 731
Query: 700 HYFNED--RKISPQSKESELRILDEIPT------GMPCLESVTIGDDIW 740
H ED +K++ +K ++P G PC + GD W
Sbjct: 732 HVLKEDALKKLNDLNKSLAEHCQQKLPNGFKAEIGQPCC-AFFAGDGSW 779
Score = 65.5 bits (158), Expect = 2e-10
Identities = 55/217 (25%), Positives = 102/217 (47%), Gaps = 18/217 (8%)
Query: 419 KICKKPNLVVKPLQLQVETNKSELNLAMANH-DIPPDAVPNKKLCRLPPLDTSSLIGVFV 477
K+ K ++ K +++ NKS+ L + I + + L L T + G
Sbjct: 215 KLENKSSIETKDVEVN---NKSDCPLGVTKEIAIWAERIMFSDLRSLQLKKTMEIKGTVT 271
Query: 478 EYIISPSQFYIRIYSRDSSELLEDMMIEMRRCYSNQLVSDRYVMPECFIQPGHLCCVRIS 537
E+ P FY+++YS + E + + ++ Y+N V ++ +P G +C + +
Sbjct: 272 EFK-HPGDFYVQLYSSEVLEYMNQLSASLKETYAN--VHEKDYIPV----KGEVCIAKYT 324
Query: 538 EDKWWYRVIIHRV-LEKQEVEVFYPDFGNIGIVQKSSLRFLKCCYTKLPAQAIPCSLAWV 596
D+ W R II V +++++ V Y D+GN I+ + + L P AI C +A V
Sbjct: 325 VDQTWNRAIIQNVDVQQKKAHVLYIDYGNEEIIPLNRIYHLNRNIDLFPPCAIKCFVANV 384
Query: 597 RPVEEHWTSKAI-----LQFQKLCGLKPLVGVVDEYV 628
P E +W+S I L ++ C +K +V +++E V
Sbjct: 385 IPAEGNWSSDCIKATKPLLMEQYCSIK-IVDILEEEV 420
Score = 46.6 bits (109), Expect = 1e-04
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 529 GHLCCVRISEDKWWYRVIIHRVLEKQEVEVFYPDFGNIGIVQKSSLRFLKCCYTKLPAQA 588
G CC + + D +WYR ++ + +VEV Y D+GNI + ++ + + LP Q
Sbjct: 994 GDACCAKYTSDDFWYRAVVLGTSDT-DVEVLYADYGNIETLPLCRVQPITSSHLALPFQI 1052
Query: 589 IPCSL 593
I CSL
Sbjct: 1053 IRCSL 1057
>gi|169163653 PREDICTED: similar to tudor domain containing 1 [Homo
sapiens]
Length = 2080
Score = 79.3 bits (194), Expect = 2e-14
Identities = 53/175 (30%), Positives = 95/175 (54%), Gaps = 14/175 (8%)
Query: 476 FVEYIISPSQFYIRIYSRDSSELLEDMMIEMRRCYSNQLVSDRYVMPECFIQPGHLCCVR 535
F+ Y+++PS F++R + D +++M + + Y + +D ++ + +PG CC R
Sbjct: 633 FIAYVLNPSNFWVR--TNDHRNEFQEIMKNINKFY-DLCENDEMILRKP--EPGLFCCAR 687
Query: 536 ISEDKWWYRVIIHRVLEKQEVEVFYPDFGNIGIVQKSSLRFLKCCYTKLPAQAIPCSLAW 595
S+D+ +YR +I + ++ V++ D+GN + ++ L + +LPA A+ CSLA
Sbjct: 688 YSKDRRFYRAVITEI-NGYKINVYFLDYGNTDSIPFFDVKILLPEFCELPALAMCCSLAH 746
Query: 596 VRPVEEHWTSKAILQFQKLCGLKPLVGVV-----DEYVDGILNIFLCDTSSNEDV 645
+ PVE+ WT AI F+KL K ++ V D+Y +NI + S N DV
Sbjct: 747 IFPVEDLWTKAAIDYFKKLVLNKAILLQVIAKKDDKYT---VNIQSVEASENIDV 798
Score = 47.8 bits (112), Expect = 5e-05
Identities = 56/221 (25%), Positives = 95/221 (42%), Gaps = 29/221 (13%)
Query: 475 VFVEYIISPSQFYIRIYSRDSSELLEDMMIEMRRCYSNQLVSDRYVMPECFIQPGHLCCV 534
V++ +I SP +FY ++ R++ +L MIE + S L + P+ +C
Sbjct: 1115 VYISHIYSPQKFYCQL-GRNNKDL---EMIETKITESVNLQN----FPKYDSNKMRVCIS 1166
Query: 535 RISEDKWWYRVIIHRVLEKQEVEVFYPDFGNIGIVQKSSLRFLKCCYTKL---PAQAIPC 591
+ ED YR + E +V++ DFGN +V ++ LR + + +L P QAI C
Sbjct: 1167 KYVEDGLSYRALAIPTDSSSEFQVYFVDFGNKQLVGENMLRAISAQFPELLFTPMQAIKC 1226
Query: 592 SLAWVRPVE-----EHWTSKAILQFQKLCGLKPLVGVVDEYVDGILNIFLCDTSSNEDVY 646
L+ +R V+ W L G ++ + DG L I L D S Y
Sbjct: 1227 FLSDLRDVDIPAEISSWFKDNFL------GRSLKAIILSQESDGQLGIELYDGSQ----Y 1276
Query: 647 FHHVLRTEGHAI---VCRENISSKGFSELNPLALYTTSSGG 684
+ ++ HA C + + +++N +TTS G
Sbjct: 1277 INEKIKVLLHAYGKRHCDQACCMEKSNKINENKRFTTSLKG 1317
Score = 44.7 bits (104), Expect = 4e-04
Identities = 33/129 (25%), Positives = 58/129 (44%), Gaps = 7/129 (5%)
Query: 465 PPLDTSSLIGVFVEYIISPSQFYIRIYSRDSSELLEDMMIEMRRCYSNQLVSDRYVMPEC 524
P L S V V +SPS+FY ++ LE++ M Y + P C
Sbjct: 381 PSLSVGSTESVKVSSALSPSKFYCQLIKWTPE--LENLTAHMTLHYDTVC---QETSPTC 435
Query: 525 FIQPGHLCCVRISEDKWWYRVIIHRVLEKQEVEVFYPDFGNIGIVQKSSLRFLKCCYTKL 584
L CV + W+R I+ ++L +V++++ D+G+ + ++ LK + +
Sbjct: 436 --DNFGLLCVARRRNGQWHRGILQQLLPPNQVKIWFMDYGSSEAIPSIYVKKLKQDFILV 493
Query: 585 PAQAIPCSL 593
P + PCSL
Sbjct: 494 PLFSFPCSL 502
Score = 42.0 bits (97), Expect = 0.003
Identities = 41/142 (28%), Positives = 61/142 (42%), Gaps = 11/142 (7%)
Query: 494 DSSELLEDMMIEMRRCYSNQLVSDR----YVMPECFIQPGHLCCVRISEDKWWYRVIIHR 549
D S LED M+ Y L+SD +P+ FI PG C + + W RV I
Sbjct: 1893 DFSIQLEDFFDIMK--YLFMLLSDLPETLQTLPQEFIIPGSSCLFKYKSEDQWNRVEISE 1950
Query: 550 VLEKQEVEVFYPDFGNIGIVQKSSLRFLKCC---YTKLPAQAIPCSLAWVRPVE-EHWTS 605
V Q + + D+G ++ S + LK LP + PC L + P + +HW+
Sbjct: 1951 V-SPQSLCLVLVDYGFSFYIRYSEIINLKVVPEELLNLPRLSYPCILYGILPAKGKHWSE 2009
Query: 606 KAILQFQKLCGLKPLVGVVDEY 627
+A + F+ LV EY
Sbjct: 2010 EAKIFFRDFLSKPDLVFQFREY 2031
Score = 40.8 bits (94), Expect = 0.006
Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 11/150 (7%)
Query: 465 PPLDTSSLIGVFVEYIISPSQFYIRIYSRDSSELLEDMMIEMRRCYSNQLVSDRYVMPEC 524
P + ++ + +V I +P+ F+I++ +S + + + + +L + V P
Sbjct: 1435 PQIYLNAKVKGYVSNISNPANFHIQLAENESVII---RLADALNATARRLRERKSVKPLV 1491
Query: 525 FIQPGHLCCVRISEDKWWYRVIIHRVLEKQEVEVFYPDFGNIGIVQKSSLRFLKCCYTKL 584
G L S D YR +I ++L EV + D+GN IV S + L+ + +
Sbjct: 1492 ----GDLVVAEYSGDNAIYRAVIKKILPGNSFEVEFIDYGNSAIVNTSKIYELQREFLTV 1547
Query: 585 PAQAIPCSLA---WVRPVEEHWTSKAILQF 611
P I L+ W P +E W K + F
Sbjct: 1548 PQLGIHAFLSGVKWNEP-DEIWDDKTVDYF 1576
Score = 35.4 bits (80), Expect = 0.26
Identities = 40/193 (20%), Positives = 80/193 (41%), Gaps = 20/193 (10%)
Query: 406 WNCPSKKQKEPQQKICKKPNLV---VKPLQLQVETNKSELNLAMANHDIPPDAVPNKKLC 462
W SK QK Q P ++ V+P +++ KS + N + +P ++
Sbjct: 1615 WKACSKLQKSALQM----PQVLSQKVRPGDNEMKKGKSNESEGSMNSNQQLFKIPLEEF- 1669
Query: 463 RLPPLDTSSLIGVFVEYIISPSQFYIRIYSRDSSELLEDMMIEMRRCYSNQLVSDRYVMP 522
+L L+ + ++ V +FY+++ + ++L D+++ + + + ++
Sbjct: 1670 KLGQLEKAEMLNVS-----KSGRFYVKLSK--NKKILSDLIVLITK----EEKKSPFLSM 1718
Query: 523 ECFIQPGHLCCVRISEDKWWYRVIIHRVLEKQEVEVFYPDFGNIGIVQKSSLRFLKCCYT 582
E I+ G C + W+R + +V VF D G IV + + L
Sbjct: 1719 ES-IEKGLECLAKSKNTLKWHRSKVEEKYVDDKVLVFLVDCGIYEIVPVCNTKLLSNEIR 1777
Query: 583 KLPAQAIPCSLAW 595
+P QA+PC W
Sbjct: 1778 NIPRQAVPCKWIW 1790
>gi|169164192 PREDICTED: similar to tudor domain containing 1 [Homo
sapiens]
Length = 2080
Score = 79.3 bits (194), Expect = 2e-14
Identities = 53/175 (30%), Positives = 95/175 (54%), Gaps = 14/175 (8%)
Query: 476 FVEYIISPSQFYIRIYSRDSSELLEDMMIEMRRCYSNQLVSDRYVMPECFIQPGHLCCVR 535
F+ Y+++PS F++R + D +++M + + Y + +D ++ + +PG CC R
Sbjct: 633 FIAYVLNPSNFWVR--TNDHRNEFQEIMKNINKFY-DLCENDEMILRKP--EPGLFCCAR 687
Query: 536 ISEDKWWYRVIIHRVLEKQEVEVFYPDFGNIGIVQKSSLRFLKCCYTKLPAQAIPCSLAW 595
S+D+ +YR +I + ++ V++ D+GN + ++ L + +LPA A+ CSLA
Sbjct: 688 YSKDRRFYRAVITEI-NGYKINVYFLDYGNTDSIPFFDVKILLPEFCELPALAMCCSLAH 746
Query: 596 VRPVEEHWTSKAILQFQKLCGLKPLVGVV-----DEYVDGILNIFLCDTSSNEDV 645
+ PVE+ WT AI F+KL K ++ V D+Y +NI + S N DV
Sbjct: 747 IFPVEDLWTKAAIDYFKKLVLNKAILLQVIAKKDDKYT---VNIQSVEASENIDV 798
Score = 47.8 bits (112), Expect = 5e-05
Identities = 56/221 (25%), Positives = 95/221 (42%), Gaps = 29/221 (13%)
Query: 475 VFVEYIISPSQFYIRIYSRDSSELLEDMMIEMRRCYSNQLVSDRYVMPECFIQPGHLCCV 534
V++ +I SP +FY ++ R++ +L MIE + S L + P+ +C
Sbjct: 1115 VYISHIYSPQKFYCQL-GRNNKDL---EMIETKITESVNLQN----FPKYDSNKMRVCIS 1166
Query: 535 RISEDKWWYRVIIHRVLEKQEVEVFYPDFGNIGIVQKSSLRFLKCCYTKL---PAQAIPC 591
+ ED YR + E +V++ DFGN +V ++ LR + + +L P QAI C
Sbjct: 1167 KYVEDGLSYRALAIPTDSSSEFQVYFVDFGNKQLVGENMLRAISAQFPELLFTPMQAIKC 1226
Query: 592 SLAWVRPVE-----EHWTSKAILQFQKLCGLKPLVGVVDEYVDGILNIFLCDTSSNEDVY 646
L+ +R V+ W L G ++ + DG L I L D S Y
Sbjct: 1227 FLSDLRDVDIPAEISSWFKDNFL------GRSLKAIILSQESDGQLGIELYDGSQ----Y 1276
Query: 647 FHHVLRTEGHAI---VCRENISSKGFSELNPLALYTTSSGG 684
+ ++ HA C + + +++N +TTS G
Sbjct: 1277 INEKIKVLLHAYGKRHCDQACCMEKSNKINENKRFTTSLKG 1317
Score = 44.7 bits (104), Expect = 4e-04
Identities = 33/129 (25%), Positives = 58/129 (44%), Gaps = 7/129 (5%)
Query: 465 PPLDTSSLIGVFVEYIISPSQFYIRIYSRDSSELLEDMMIEMRRCYSNQLVSDRYVMPEC 524
P L S V V +SPS+FY ++ LE++ M Y + P C
Sbjct: 381 PSLSVGSTESVKVSSALSPSKFYCQLIKWTPE--LENLTAHMTLHYDTVC---QETSPTC 435
Query: 525 FIQPGHLCCVRISEDKWWYRVIIHRVLEKQEVEVFYPDFGNIGIVQKSSLRFLKCCYTKL 584
L CV + W+R I+ ++L +V++++ D+G+ + ++ LK + +
Sbjct: 436 --DNFGLLCVARRRNGQWHRGILQQLLPPNQVKIWFMDYGSSEAIPSIYVKKLKQDFILV 493
Query: 585 PAQAIPCSL 593
P + PCSL
Sbjct: 494 PLFSFPCSL 502
Score = 42.0 bits (97), Expect = 0.003
Identities = 41/142 (28%), Positives = 61/142 (42%), Gaps = 11/142 (7%)
Query: 494 DSSELLEDMMIEMRRCYSNQLVSDR----YVMPECFIQPGHLCCVRISEDKWWYRVIIHR 549
D S LED M+ Y L+SD +P+ FI PG C + + W RV I
Sbjct: 1893 DFSIQLEDFFDIMK--YLFMLLSDLPETLQTLPQEFIIPGSSCLFKYKSEDQWNRVEISE 1950
Query: 550 VLEKQEVEVFYPDFGNIGIVQKSSLRFLKCC---YTKLPAQAIPCSLAWVRPVE-EHWTS 605
V Q + + D+G ++ S + LK LP + PC L + P + +HW+
Sbjct: 1951 V-SPQSLCLVLVDYGFSFYIRYSEIINLKVVPEELLNLPRLSYPCILYGILPAKGKHWSE 2009
Query: 606 KAILQFQKLCGLKPLVGVVDEY 627
+A + F+ LV EY
Sbjct: 2010 EAKIFFRDFLSKPDLVFQFREY 2031
Score = 40.8 bits (94), Expect = 0.006
Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 11/150 (7%)
Query: 465 PPLDTSSLIGVFVEYIISPSQFYIRIYSRDSSELLEDMMIEMRRCYSNQLVSDRYVMPEC 524
P + ++ + +V I +P+ F+I++ +S + + + + +L + V P
Sbjct: 1435 PQIYLNAKVKGYVSNISNPANFHIQLAENESVII---RLADALNATARRLRERKSVKPLV 1491
Query: 525 FIQPGHLCCVRISEDKWWYRVIIHRVLEKQEVEVFYPDFGNIGIVQKSSLRFLKCCYTKL 584
G L S D YR +I ++L EV + D+GN IV S + L+ + +
Sbjct: 1492 ----GDLVVAEYSGDNAIYRAVIKKILPGNSFEVEFIDYGNSAIVNTSKIYELQREFLTV 1547
Query: 585 PAQAIPCSLA---WVRPVEEHWTSKAILQF 611
P I L+ W P +E W K + F
Sbjct: 1548 PQLGIHAFLSGVKWNEP-DEIWDDKTVDYF 1576
Score = 35.4 bits (80), Expect = 0.26
Identities = 40/193 (20%), Positives = 80/193 (41%), Gaps = 20/193 (10%)
Query: 406 WNCPSKKQKEPQQKICKKPNLV---VKPLQLQVETNKSELNLAMANHDIPPDAVPNKKLC 462
W SK QK Q P ++ V+P +++ KS + N + +P ++
Sbjct: 1615 WKACSKLQKSALQM----PQVLSQKVRPGDNEMKKGKSNESEGSMNSNQQLFKIPLEEF- 1669
Query: 463 RLPPLDTSSLIGVFVEYIISPSQFYIRIYSRDSSELLEDMMIEMRRCYSNQLVSDRYVMP 522
+L L+ + ++ V +FY+++ + ++L D+++ + + + ++
Sbjct: 1670 KLGQLEKAEMLNVS-----KSGRFYVKLSK--NKKILSDLIVLITK----EEKKSPFLSM 1718
Query: 523 ECFIQPGHLCCVRISEDKWWYRVIIHRVLEKQEVEVFYPDFGNIGIVQKSSLRFLKCCYT 582
E I+ G C + W+R + +V VF D G IV + + L
Sbjct: 1719 ES-IEKGLECLAKSKNTLKWHRSKVEEKYVDDKVLVFLVDCGIYEIVPVCNTKLLSNEIR 1777
Query: 583 KLPAQAIPCSLAW 595
+P QA+PC W
Sbjct: 1778 NIPRQAVPCKWIW 1790
>gi|169163210 PREDICTED: similar to tudor domain containing 1 [Homo
sapiens]
Length = 2080
Score = 79.3 bits (194), Expect = 2e-14
Identities = 53/175 (30%), Positives = 95/175 (54%), Gaps = 14/175 (8%)
Query: 476 FVEYIISPSQFYIRIYSRDSSELLEDMMIEMRRCYSNQLVSDRYVMPECFIQPGHLCCVR 535
F+ Y+++PS F++R + D +++M + + Y + +D ++ + +PG CC R
Sbjct: 633 FIAYVLNPSNFWVR--TNDHRNEFQEIMKNINKFY-DLCENDEMILRKP--EPGLFCCAR 687
Query: 536 ISEDKWWYRVIIHRVLEKQEVEVFYPDFGNIGIVQKSSLRFLKCCYTKLPAQAIPCSLAW 595
S+D+ +YR +I + ++ V++ D+GN + ++ L + +LPA A+ CSLA
Sbjct: 688 YSKDRRFYRAVITEI-NGYKINVYFLDYGNTDSIPFFDVKILLPEFCELPALAMCCSLAH 746
Query: 596 VRPVEEHWTSKAILQFQKLCGLKPLVGVV-----DEYVDGILNIFLCDTSSNEDV 645
+ PVE+ WT AI F+KL K ++ V D+Y +NI + S N DV
Sbjct: 747 IFPVEDLWTKAAIDYFKKLVLNKAILLQVIAKKDDKYT---VNIQSVEASENIDV 798
Score = 47.8 bits (112), Expect = 5e-05
Identities = 56/221 (25%), Positives = 95/221 (42%), Gaps = 29/221 (13%)
Query: 475 VFVEYIISPSQFYIRIYSRDSSELLEDMMIEMRRCYSNQLVSDRYVMPECFIQPGHLCCV 534
V++ +I SP +FY ++ R++ +L MIE + S L + P+ +C
Sbjct: 1115 VYISHIYSPQKFYCQL-GRNNKDL---EMIETKITESVNLQN----FPKYDSNKMRVCIS 1166
Query: 535 RISEDKWWYRVIIHRVLEKQEVEVFYPDFGNIGIVQKSSLRFLKCCYTKL---PAQAIPC 591
+ ED YR + E +V++ DFGN +V ++ LR + + +L P QAI C
Sbjct: 1167 KYVEDGLSYRALAIPTDSSSEFQVYFVDFGNKQLVGENMLRAISAQFPELLFTPMQAIKC 1226
Query: 592 SLAWVRPVE-----EHWTSKAILQFQKLCGLKPLVGVVDEYVDGILNIFLCDTSSNEDVY 646
L+ +R V+ W L G ++ + DG L I L D S Y
Sbjct: 1227 FLSDLRDVDIPAEISSWFKDNFL------GRSLKAIILSQESDGQLGIELYDGSQ----Y 1276
Query: 647 FHHVLRTEGHAI---VCRENISSKGFSELNPLALYTTSSGG 684
+ ++ HA C + + +++N +TTS G
Sbjct: 1277 INEKIKVLLHAYGKRHCDQACCMEKSNKINENKRFTTSLKG 1317
Score = 44.7 bits (104), Expect = 4e-04
Identities = 33/129 (25%), Positives = 58/129 (44%), Gaps = 7/129 (5%)
Query: 465 PPLDTSSLIGVFVEYIISPSQFYIRIYSRDSSELLEDMMIEMRRCYSNQLVSDRYVMPEC 524
P L S V V +SPS+FY ++ LE++ M Y + P C
Sbjct: 381 PSLSVGSTESVKVSSALSPSKFYCQLIKWTPE--LENLTAHMTLHYDTVC---QETSPTC 435
Query: 525 FIQPGHLCCVRISEDKWWYRVIIHRVLEKQEVEVFYPDFGNIGIVQKSSLRFLKCCYTKL 584
L CV + W+R I+ ++L +V++++ D+G+ + ++ LK + +
Sbjct: 436 --DNFGLLCVARRRNGQWHRGILQQLLPPNQVKIWFMDYGSSEAIPSIYVKKLKQDFILV 493
Query: 585 PAQAIPCSL 593
P + PCSL
Sbjct: 494 PLFSFPCSL 502
Score = 42.0 bits (97), Expect = 0.003
Identities = 41/142 (28%), Positives = 61/142 (42%), Gaps = 11/142 (7%)
Query: 494 DSSELLEDMMIEMRRCYSNQLVSDR----YVMPECFIQPGHLCCVRISEDKWWYRVIIHR 549
D S LED M+ Y L+SD +P+ FI PG C + + W RV I
Sbjct: 1893 DFSIQLEDFFDIMK--YLFMLLSDLPETLQTLPQEFIIPGSSCLFKYKSEDQWNRVEISE 1950
Query: 550 VLEKQEVEVFYPDFGNIGIVQKSSLRFLKCC---YTKLPAQAIPCSLAWVRPVE-EHWTS 605
V Q + + D+G ++ S + LK LP + PC L + P + +HW+
Sbjct: 1951 V-SPQSLCLVLVDYGFSFYIRYSEIINLKVVPEELLNLPRLSYPCILYGILPAKGKHWSE 2009
Query: 606 KAILQFQKLCGLKPLVGVVDEY 627
+A + F+ LV EY
Sbjct: 2010 EAKIFFRDFLSKPDLVFQFREY 2031
Score = 40.8 bits (94), Expect = 0.006
Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 11/150 (7%)
Query: 465 PPLDTSSLIGVFVEYIISPSQFYIRIYSRDSSELLEDMMIEMRRCYSNQLVSDRYVMPEC 524
P + ++ + +V I +P+ F+I++ +S + + + + +L + V P
Sbjct: 1435 PQIYLNAKVKGYVSNISNPANFHIQLAENESVII---RLADALNATARRLRERKSVKPLV 1491
Query: 525 FIQPGHLCCVRISEDKWWYRVIIHRVLEKQEVEVFYPDFGNIGIVQKSSLRFLKCCYTKL 584
G L S D YR +I ++L EV + D+GN IV S + L+ + +
Sbjct: 1492 ----GDLVVAEYSGDNAIYRAVIKKILPGNSFEVEFIDYGNSAIVNTSKIYELQREFLTV 1547
Query: 585 PAQAIPCSLA---WVRPVEEHWTSKAILQF 611
P I L+ W P +E W K + F
Sbjct: 1548 PQLGIHAFLSGVKWNEP-DEIWDDKTVDYF 1576
Score = 35.4 bits (80), Expect = 0.26
Identities = 40/193 (20%), Positives = 80/193 (41%), Gaps = 20/193 (10%)
Query: 406 WNCPSKKQKEPQQKICKKPNLV---VKPLQLQVETNKSELNLAMANHDIPPDAVPNKKLC 462
W SK QK Q P ++ V+P +++ KS + N + +P ++
Sbjct: 1615 WKACSKLQKSALQM----PQVLSQKVRPGDNEMKKGKSNESEGSMNSNQQLFKIPLEEF- 1669
Query: 463 RLPPLDTSSLIGVFVEYIISPSQFYIRIYSRDSSELLEDMMIEMRRCYSNQLVSDRYVMP 522
+L L+ + ++ V +FY+++ + ++L D+++ + + + ++
Sbjct: 1670 KLGQLEKAEMLNVS-----KSGRFYVKLSK--NKKILSDLIVLITK----EEKKSPFLSM 1718
Query: 523 ECFIQPGHLCCVRISEDKWWYRVIIHRVLEKQEVEVFYPDFGNIGIVQKSSLRFLKCCYT 582
E I+ G C + W+R + +V VF D G IV + + L
Sbjct: 1719 ES-IEKGLECLAKSKNTLKWHRSKVEEKYVDDKVLVFLVDCGIYEIVPVCNTKLLSNEIR 1777
Query: 583 KLPAQAIPCSLAW 595
+P QA+PC W
Sbjct: 1778 NIPRQAVPCKWIW 1790
>gi|58197558 tudor domain containing 6 [Homo sapiens]
Length = 2096
Score = 68.9 bits (167), Expect = 2e-11
Identities = 61/210 (29%), Positives = 101/210 (48%), Gaps = 11/210 (5%)
Query: 477 VEYIISPSQFYIRIYSRDSSELLEDMMIEMRRCYSNQLVSDRYVMPECFIQPGHLCCVRI 536
VE++ +PS+F+IR+ R + +M M YS+ D V+ +P LCCV+
Sbjct: 493 VEFVKNPSEFWIRL--RKHNVTFSKLMRRMCGFYSSASKLDGVVLKP---EPDDLCCVKW 547
Query: 537 SEDKWWYRVIIHRVLEKQEVEVFYPDFGNIGIVQKSSLRFLKCCYTKLPAQAIPCSLAWV 596
E+ + YR I+ + L+ + V+VF D GN V +R L + +LP A+ C+LA +
Sbjct: 548 KENGY-YRAIVTK-LDDKSVDVFLVDRGNSENVDWYDVRMLLPQFRQLPILAVKCTLADI 605
Query: 597 RPVEEHWTSKAILQFQKLCGLKPLVGVVDEYVDGILNIFLCDTSSNEDVYFHHVLRTEGH 656
P+ + W+ +A+ F+K K LV + + D I + D S + V+ G+
Sbjct: 606 WPLGKTWSQEAVSFFKKTVLHKELVIHILDKQDHQYVIEILDESRTGEENISKVIAQAGY 665
Query: 657 A----IVCRENISSKGFSELNPLALYTTSS 682
A +ENI S + +TT S
Sbjct: 666 AKYQEFETKENILVNAHSPGHVSNHFTTES 695
Score = 52.4 bits (124), Expect = 2e-06
Identities = 47/168 (27%), Positives = 79/168 (47%), Gaps = 22/168 (13%)
Query: 475 VFVEYIISPSQFYIRIYSRDSSELLEDMMIEMRRCYSNQLVSDRYVMPECFIQPGHLCCV 534
V++ +I P FY ++ +R+++ ++E C QL + + PG LC
Sbjct: 990 VYITHIDDPWTFYCQL-ARNAN------ILEQLSCSITQLSKVLLNLKTSPLNPGTLCLA 1042
Query: 535 RISEDKWWYRVIIHRVLEKQEVEVFYPDFGNIGIVQKSSLRFLKC---CYTKLPAQAIPC 591
+ ++ W+ ++I EK+ +VF+ DFGNI +V L + LP QA+ C
Sbjct: 1043 KYTDGNWYRGIVI----EKEPKKVFFVDFGNIYVVTSDDLLPIPSDAYDVLLLPMQAVRC 1098
Query: 592 SLAWVRPVEEHWTSKAILQFQKLC---GLKPLVGVVDEYVDGILNIFL 636
SL+ + +H + ++ FQ+ LK LV D DG L I L
Sbjct: 1099 SLS---DIPDHIPEEVVVWFQETILDKSLKALVVAKDP--DGTLIIEL 1141
Score = 49.3 bits (116), Expect = 2e-05
Identities = 36/141 (25%), Positives = 62/141 (43%), Gaps = 16/141 (11%)
Query: 475 VFVEYIISPSQFYIRIYSRDSSELLEDMMIEMRRCYSNQLVSDRYVMPECFIQP----GH 530
V+V +I S FY+ +L+ED E + ++ ++ PE ++ P G
Sbjct: 1309 VYVSHINDLSDFYV--------QLIED---EAEISHLSERLNSVKTRPEYYVGPPLQRGD 1357
Query: 531 LCCVRISEDKWWYRVIIHRVLEKQEVEVFYPDFGNIGIVQKSSLRFLKCCYTKLPAQAIP 590
+ C ED WYR +I + V + D+GN+ +V + + L LP I
Sbjct: 1358 MICAVFPEDNLWYRAVIKEQQPNDLLSVQFIDYGNVSVVHTNKIGRLDLVNAILPGLCIH 1417
Query: 591 CSLAWVRPVEEHWTSKAILQF 611
CSL V ++ SK ++ +
Sbjct: 1418 CSLQGFE-VPDNKNSKKMMHY 1437
Score = 44.7 bits (104), Expect = 4e-04
Identities = 36/124 (29%), Positives = 55/124 (44%), Gaps = 7/124 (5%)
Query: 472 LIGVFVEYIISPSQFYIRIYSRDSSELLEDMMIEMRRCYSNQLVSDRYVMPECFIQPGHL 531
+I + I P F+ + + + LE +E++ Q+ R +P +I G
Sbjct: 1520 MIRAYATVIDGPEYFWCQFADTEKLQCLE---VEVQTA-GEQVADRRNCIPCPYI--GDP 1573
Query: 532 CCVRISEDKWWYRVIIHRVLEKQEVEVFYPDFGNI-GIVQKSSLRFLKCCYTKLPAQAIP 590
C VR ED +YR +I + E V V DFGNI V +L + +P QA P
Sbjct: 1574 CIVRYREDGHYYRALITNICEDYLVSVRLVDFGNIEDCVDPKALWAIPSELLSVPMQAFP 1633
Query: 591 CSLA 594
C L+
Sbjct: 1634 CCLS 1637
Score = 41.6 bits (96), Expect = 0.004
Identities = 36/166 (21%), Positives = 65/166 (39%), Gaps = 6/166 (3%)
Query: 533 CVRISEDKWWYRVIIHRVLEKQE-VEVFYPDFGNIGIVQKSSLRFLKCCYTKLPAQAIPC 591
C D WYR ++ Q +V + D+G +V SSLR+L Y ++P PC
Sbjct: 317 CASCGLDGHWYRALLLETFRPQRCAQVLHVDYGRKELVSCSSLRYLLPEYFRMPVVTYPC 376
Query: 592 SLAWVRPVEEHWTSKAILQFQKLCGLKPLVGVVDEYVDGILNIFLCDTSSNEDVYFHHVL 651
+L + W+ + + L L V E+ +++ + + + V
Sbjct: 377 ALYGLWDGGRGWSRSQVGDLKTLI-LGKAVNAKIEFYCSFEHVYYVSLYGEDGINLNRVF 435
Query: 652 RTEGHAIVCRENISSKGFSELNPLALYTTSSGGPEDIVLTELGYPS 697
+ + R + S+ E P T+ S P + V E+ P+
Sbjct: 436 GVQSCCLADRV-LQSQATEEEEP---ETSQSQSPAEEVDEEISLPA 477
Score = 40.4 bits (93), Expect = 0.008
Identities = 35/151 (23%), Positives = 67/151 (44%), Gaps = 14/151 (9%)
Query: 467 LDTSSLIGVFVEYIISPSQFYIRIYSRDSSELLEDMMIEMRRCYSNQLVSDRYVMPECFI 526
L+ S + V V Y+ +P F+ ++ +R+ L M C + R +
Sbjct: 768 LEVGSTVEVRVSYVENPGYFWCQL-TRNIQGLKTLMSDIQYYCKNTAAPHQRNTLA---- 822
Query: 527 QPGHLCCVRISEDKWWYRVIIHRVLEKQEVEVFYPDFGNIGIVQKSSLRFLKCCYTKLPA 586
C + + ++ W R +I + + V V + D+G+ +V ++ + + K+ A
Sbjct: 823 -----CLAKRTVNRQWSRALISGIQSVEHVNVTFVDYGDREMVSVKNIYSISEEFLKVKA 877
Query: 587 QAIPCSL-AWVRPVEEH---WTSKAILQFQK 613
QA CSL ++PV ++ W KAI F +
Sbjct: 878 QAFRCSLYNLIQPVGQNPFVWDVKAIQAFNE 908
>gi|94421471 ring finger protein 17 [Homo sapiens]
Length = 1623
Score = 55.1 bits (131), Expect = 3e-07
Identities = 46/170 (27%), Positives = 83/170 (48%), Gaps = 10/170 (5%)
Query: 473 IGVFVEYIISPSQFYIRIYSRDSSELLEDMMIEMRRCYSNQLVSDRYVMPECFIQPGHLC 532
+ V V +I SP FY+++ + ++L ++ + Y ++ + ++ C +Q
Sbjct: 680 VSVTVCHINSPGDFYLQLI--EGLDILF-LLKTIEEFYKSEDGENLEIL--CPVQDQ--A 732
Query: 533 CVRISEDKWWYRVIIHRVLEKQEVEVFYPDFGNIGIVQKSSLRFLKCCYTKLPAQAIPCS 592
CV ED WYR + + QEVEV Y DFGN + +R +K + P +AI C
Sbjct: 733 CVAKFEDGIWYRAKVIGLPGHQEVEVKYVDFGNTAKITIKDVRKIKDEFLNAPEKAIKCK 792
Query: 593 LAWVRPVEE--HWTSKAILQFQKLCGLKPLV-GVVDEYVDGILNIFLCDT 639
LA++ P + W+ +A +F++ K + V+ D +L + L D+
Sbjct: 793 LAYIEPYKRTMQWSKEAKEKFEEKAQDKFMTCSVIKILEDNVLLVELFDS 842
Score = 38.1 bits (87), Expect = 0.041
Identities = 42/172 (24%), Positives = 71/172 (41%), Gaps = 22/172 (12%)
Query: 450 DIPPDAVPNKKLCRLPPLDTSSL------------IGVFVEYIISPSQFYIRIYSRDSSE 497
D P+ + + ++ L P+ SL + V + +ISP + Y++ ++
Sbjct: 883 DPSPEEIISNEVHNLNPVSAKSLPNENFQSLYNKELPVHICNVISPEKIYVQWLLTEN-- 940
Query: 498 LLEDMMIEMRRCYSNQLVSDRYVMPECFIQPGHLCCVRISEDKWWYRVIIHRVLEKQEVE 557
LL + +M Y N P + H C V+I + W R I R++ VE
Sbjct: 941 LLNSLEEKMIAAYENSKWE-----PVKWENDMH-CAVKIQDKNQWRRGQIIRMVTDTLVE 994
Query: 558 VFYPDFGNIGIVQKSSLRFLKCCYTKLPAQAIPCSLAWVRPV--EEHWTSKA 607
V D G +V LR L+ + ++ CSL +RP + WT+ A
Sbjct: 995 VLLYDVGVELVVNVDCLRKLEENLKTMGRLSLECSLVDIRPAGGSDKWTATA 1046
Score = 33.9 bits (76), Expect = 0.77
Identities = 30/90 (33%), Positives = 38/90 (42%), Gaps = 3/90 (3%)
Query: 525 FIQPGHLCCVRISEDKWWYRVIIHRVLEKQEVEVFYPDFGNIGIVQKSSLRFLKCCYTKL 584
F + G C VR S D WYR + V+ V V Y D G + + L + Y +
Sbjct: 1228 FWKKGEACAVRGS-DTLWYRGKVMEVVGGA-VRVQYLDHGFTEKIPQCHL-YPILLYPDI 1284
Query: 585 PAQAIPCSLAWVRPVEEHWTSKAILQFQKL 614
P IPC L PV W AI Q+L
Sbjct: 1285 PQFCIPCQLHNTTPVGNVWQPDAIEVLQQL 1314
>gi|166851804 tudor domain containing 9 [Homo sapiens]
Length = 1382
Score = 46.2 bits (108), Expect = 1e-04
Identities = 51/212 (24%), Positives = 88/212 (41%), Gaps = 16/212 (7%)
Query: 469 TSSLIGVFVEYIISPSQFYIRIYSRDSSELLEDMMIEMRRCYSNQLVSDRYVMPECFIQP 528
T L+ + V ++ F+ ++SE+L+ + E+ NQL V P
Sbjct: 896 TDLLLTIDVTEVVEVGHFWGYRIDENNSEILKKLTAEI-----NQLT---LVPLPTHPHP 947
Query: 529 GHLCCVRISE-DKWWYRVIIHRVLEKQEVEVFYPDFGNIGIVQKSSLRFLKCCYTKLPAQ 587
+C ++ DK Y + EVF+ D+GN V L + C + +LP Q
Sbjct: 948 DLVCLAPFADFDKQRYFRAQVLYVSGNSAEVFFVDYGNKSHVDLHLLMEIPCQFLELPFQ 1007
Query: 588 AIPCSLAWVRP------VEEHWTSKAILQFQKLCGLKPLVGVVDEYVDGILNIFLCDTSS 641
A+ + +RP +HW+ A F L L+ V V +L++ + S
Sbjct: 1008 ALEFKICKMRPSAKSLVCGKHWSDGASQWFASLVSGCTLLVKVFSVVHSVLHVDVYQYSG 1067
Query: 642 NED-VYFHHVLRTEGHAIVCRENISSKGFSEL 672
+D + VL +G+A + E+ SK E+
Sbjct: 1068 VQDAINIRDVLIQQGYAELTEESYESKQSHEV 1099
>gi|4502015 A-kinase anchor protein 1 precursor [Homo sapiens]
Length = 903
Score = 45.8 bits (107), Expect = 2e-04
Identities = 53/220 (24%), Positives = 92/220 (41%), Gaps = 27/220 (12%)
Query: 417 QQKICKKPNLVVKPLQLQVETNKSELNLAMANHDIPPDAVPNKKLCRLPPLDTSSLI--- 473
Q + K NL+ K + ELNL N PP +P+ L LP TS L+
Sbjct: 661 QHHVDKALNLIGKKFK--------ELNLT--NIYAPP--LPSLALPSLPM--TSWLMLPD 706
Query: 474 GVFVEYII----SPSQFYIRIYSRDSSELLEDMMIEMRRCYSNQLVSDRYVMPECFIQPG 529
G+ VE I+ + +++ ++ + L + +M CYS + E +
Sbjct: 707 GITVEVIVVNQVNAGHLFVQQHTHPTFHALRSLDQQMYLCYSQPGIPTLPTPVEITV--- 763
Query: 530 HLCCVRISEDKWWYRVIIHRVLEKQEVEVFYPDFGNIGIVQKSSLRFLKCCYTKLPAQAI 589
+C ++ WW ++ E EVE+ Y D+G V+ LR ++ + LP Q
Sbjct: 764 -ICAAPGADGAWWRAQVVASYEETNEVEIRYVDYGGYKRVKVDVLRQIRSDFVTLPFQGA 822
Query: 590 PCSLAWVRPV--EEHWTSKAILQFQKLCGLKPLVGVVDEY 627
L V P+ ++ ++ +A ++ G L+ V Y
Sbjct: 823 EVLLDSVMPLSDDDQFSPEADAAMSEMTGNTALLAQVTSY 862
>gi|77404397 staphylococcal nuclease domain containing 1 [Homo
sapiens]
Length = 910
Score = 44.3 bits (103), Expect = 6e-04
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 9/125 (7%)
Query: 475 VFVEYIISPSQFYIRIYSRDSSELLEDMMIEMRRCYSNQLVSDRYVMPECFIQPGHLCCV 534
VFV I FY++ ++ LE +M MR N + S V + G C
Sbjct: 685 VFVTEITDDLHFYVQ--DVETGTQLEKLMENMR----NDIASHPPVEGSYAPRRGEFCIA 738
Query: 535 RISEDKWWYRVIIHRVLEKQEVEVFYPDFGNIGIVQKSSLRFLKCCYTK--LPAQAIPCS 592
+ + +W YR + +V ++ VFY D+GN ++ + L L ++ LPAQA +
Sbjct: 739 KFVDGEW-YRARVEKVESPAKIHVFYIDYGNREVLPSTRLGTLSPAFSTRVLPAQATEYA 797
Query: 593 LAWVR 597
A+++
Sbjct: 798 FAFIQ 802
>gi|85797660 limkain b1 [Homo sapiens]
Length = 1742
Score = 38.5 bits (88), Expect = 0.031
Identities = 62/298 (20%), Positives = 107/298 (35%), Gaps = 65/298 (21%)
Query: 138 ELKDLLALSPVLLSDFEK---AFAKRFGRSFQYMQYGFLSMFEVLNAASDVISVEQTRAG 194
++ DLL P F K ++ FGR + YGF + E+ A D + V +
Sbjct: 1266 DVVDLLRHQPHFRMPFNKFIPSYHHHFGRQCKLAYYGFTKLLELFEAIPDTLQVLECGEE 1325
Query: 195 SLLMLKK------------SVTEEKPRGC--------PAGKIFTQPFRMKQGSYSTGFPV 234
+L L + + + C K F FR++ S+ +
Sbjct: 1326 KILTLTEVERFKALAAQFVKLLRSQKDNCLMMTDLLTEYAKTFGYTFRLQDYDVSSISAL 1385
Query: 235 A-KPCFSQPTSNMEPPKQI-------------------MSMEKTSKLNVVETSR---LNH 271
K C +++E +QI MS E T+ L+V E R H
Sbjct: 1386 TQKLCHVVKVADIESGRQIQLINRKSLRSLTAQLLVLLMSWEGTTHLSVEELKRHYESTH 1445
Query: 272 TEKLNQLENTFKSV---------IAQIGPGGTISSELKHKIKFVVSKFPEGL-------- 314
LN E F ++ + ++ + +K ++ +K L
Sbjct: 1446 NTPLNPCEYGFMTLTELLKSLPYLVEVFTNDKMEECVKLTSLYLFAKNVRSLLHTYHYQQ 1505
Query: 315 -FISKLLGEYEVIFKEQLSPKKLGFLNVTELVGALSDILHVEFRKGHQDLLVFDADKK 371
F+ + Y E L PK G +V EL+GA+ ++ ++ GH+ ++V D K
Sbjct: 1506 IFLHEFSMAYTKYVGETLQPKTYGHSSVEELLGAIPQVVWIK-GHGHKRIVVLKNDMK 1562
>gi|161016765 tudor domain containing 12 [Homo sapiens]
Length = 395
Score = 36.2 bits (82), Expect = 0.15
Identities = 28/107 (26%), Positives = 43/107 (40%), Gaps = 18/107 (16%)
Query: 526 IQPGHLCCVRISEDKWWYRVIIHRVLEKQE---VEVFYPDFGNIGIVQKSSLRFLKCCYT 582
++ G +C V E K W R I+ + + E F DF V+ ++R + +
Sbjct: 57 LEEGQVCVVYCEELKCWCRAIVKSITSSADQYLAECFLVDFAKNIPVKSKNIRVVVESFM 116
Query: 583 KLPAQAIPCSLAWVRPVEEH---------------WTSKAILQFQKL 614
+LP +A SL +PV H W + AI FQ L
Sbjct: 117 QLPYRAKKFSLYCTKPVTLHIDFCRDSTDIVPAKKWDNAAIQYFQNL 163
>gi|94421473 paternally expressed 10 isoform RF1 [Homo sapiens]
Length = 325
Score = 33.5 bits (75), Expect = 1.0
Identities = 38/159 (23%), Positives = 66/159 (41%), Gaps = 19/159 (11%)
Query: 817 AQEKNTGTNRTQKQLDINGSSDSSTLPKLEEFCTSLTQSEQSADGSQSEPNNSQTQPKQI 876
++E N + KQ + N + S EE + T EQ + E ++ + +
Sbjct: 10 SEEINNLREKVMKQSEENNNLQSQVQKLTEE---NTTLREQVEPTPEDEDDDIELRGAAA 66
Query: 877 QLSTAAPCSTTAVDDSAEKPSGSVESSPEILKNEDFSSSRAITLYKDKRQESVDQLSLIL 936
+ P +D EK G+ P++L F + I + K R SVD++ +
Sbjct: 67 AAAPPPPIEEECPEDLPEKFDGN----PDMLA--PFMAQCQIFMEKSTRDFSVDRVRV-- 118
Query: 937 SYECQISQKLYIPRSTATAALGAAARLATSRSLLHWYPS 975
C ++ + T AA A+A+L S L+H YP+
Sbjct: 119 ---CFVTSMM-----TGRAARWASAKLERSHYLMHNYPA 149
>gi|94421475 paternally expressed 10 isoform RF1/2 [Homo sapiens]
Length = 708
Score = 33.5 bits (75), Expect = 1.0
Identities = 38/159 (23%), Positives = 66/159 (41%), Gaps = 19/159 (11%)
Query: 817 AQEKNTGTNRTQKQLDINGSSDSSTLPKLEEFCTSLTQSEQSADGSQSEPNNSQTQPKQI 876
++E N + KQ + N + S EE + T EQ + E ++ + +
Sbjct: 10 SEEINNLREKVMKQSEENNNLQSQVQKLTEE---NTTLREQVEPTPEDEDDDIELRGAAA 66
Query: 877 QLSTAAPCSTTAVDDSAEKPSGSVESSPEILKNEDFSSSRAITLYKDKRQESVDQLSLIL 936
+ P +D EK G+ P++L F + I + K R SVD++ +
Sbjct: 67 AAAPPPPIEEECPEDLPEKFDGN----PDMLA--PFMAQCQIFMEKSTRDFSVDRVRV-- 118
Query: 937 SYECQISQKLYIPRSTATAALGAAARLATSRSLLHWYPS 975
C ++ + T AA A+A+L S L+H YP+
Sbjct: 119 ---CFVTSMM-----TGRAARWASAKLERSHYLMHNYPA 149
>gi|117606360 ADP-ribosylation factor guanine nucleotide factor 6
isoform a [Homo sapiens]
Length = 1047
Score = 33.1 bits (74), Expect = 1.3
Identities = 36/163 (22%), Positives = 59/163 (36%), Gaps = 20/163 (12%)
Query: 706 RKISPQSKESELRILDEIPTGMPCLESVTIGDDIWDENWLPLQAKMGKGGDAASHLFTAS 765
R SP SKES ++ + + S ++ +++WDE+W + G S +
Sbjct: 328 RTASPDSKESS-KVPRHLISSAGLCNSSSLTENVWDESWKAPSERPGTSSGTFSPVRLDE 386
Query: 766 LGGKNQYSSCKEMPQKDWCFSTPKDTWDDSWQPSGLVNGTKVEVHKPEVLGAQEKNTGTN 825
G + K TPK D ++ + V G E G
Sbjct: 387 SGEDEVFL----QENKQHLEKTPKPERDRE----------RISEQEEHVKGEDEDILGPG 432
Query: 826 RTQKQLDINGSSDSSTLPKLEEFCTSLTQSEQSADGSQSEPNN 868
T+ D+ S + L TSL S +S + SEP++
Sbjct: 433 YTEDSTDVYSSQFETILDN-----TSLYYSAESLETLYSEPDS 470
>gi|46255064 synaptotagmin-like 2 isoform d [Homo sapiens]
Length = 1256
Score = 32.7 bits (73), Expect = 1.7
Identities = 30/123 (24%), Positives = 56/123 (45%), Gaps = 8/123 (6%)
Query: 794 DSWQPSGLVNGTKVEVHKPEVLGAQEKNTGTNRTQKQLDINGSSDSSTLPKLEEFCTSLT 853
+SW+ N + E VL E++ K L+ + SSDSS K++ L
Sbjct: 802 ESWR-----NPSSSEEEPSPVLKTLERSAARKMPSKSLE-DISSDSSNQAKVDNQPEELV 855
Query: 854 QSEQSADGSQSEPNNSQTQPKQI-QLSTAAPCSTTAVDDSAEKPSGSVESSPEILKNEDF 912
+S + ++P+N + P ++ ++S + P D E + S ESS ++ +++
Sbjct: 856 RSAEDVSTVPTQPDNPFSHPDKLKRMSKSVPAFLQDESDDRETDTAS-ESSYQLSRHKKS 914
Query: 913 SSS 915
SS
Sbjct: 915 PSS 917
>gi|82830424 gon-4-like isoform a [Homo sapiens]
Length = 2240
Score = 32.7 bits (73), Expect = 1.7
Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 29/147 (19%)
Query: 786 STPKDTWDDSWQPSGLVNGTKV------EVHKPEVLGAQEKNTGTNRTQKQLD-INGSSD 838
S+P +DS G GT V E + PE +E+ + TQ + D ++ +S+
Sbjct: 1425 SSPPGKPEDSSSVDGQSVGTPVGPETGGEKNGPE---EEEEEDFDDLTQDEEDEMSSASE 1481
Query: 839 SSTL--PKLEEFCTSLT----QSEQSADGSQSEPNNSQ--TQPKQIQ---------LSTA 881
S L P+L+E LT + S +G E N+ + ++P++ + L
Sbjct: 1482 ESVLSVPELQETMEKLTWLASERRMSQEGESEEENSQEENSEPEEEEEEEAEGMESLQKE 1541
Query: 882 APCSTTAVDDSAEKPS--GSVESSPEI 906
+ AV DSAEKP S E++PE+
Sbjct: 1542 DEMTDEAVGDSAEKPPTFASPETAPEV 1568
>gi|170784859 serine/threonine kinase 31 isoform b [Homo sapiens]
Length = 996
Score = 32.7 bits (73), Expect = 1.7
Identities = 13/38 (34%), Positives = 24/38 (63%)
Query: 537 SEDKWWYRVIIHRVLEKQEVEVFYPDFGNIGIVQKSSL 574
SED+ WYR + +++ ++ V Y D+GN I+ +S +
Sbjct: 67 SEDQCWYRCKVLKIISVEKCLVRYIDYGNTEILNRSDI 104
>gi|14602443 serine/threonine kinase 31 isoform a [Homo sapiens]
Length = 1019
Score = 32.7 bits (73), Expect = 1.7
Identities = 13/38 (34%), Positives = 24/38 (63%)
Query: 537 SEDKWWYRVIIHRVLEKQEVEVFYPDFGNIGIVQKSSL 574
SED+ WYR + +++ ++ V Y D+GN I+ +S +
Sbjct: 90 SEDQCWYRCKVLKIISVEKCLVRYIDYGNTEILNRSDI 127
>gi|170784856 serine/threonine kinase 31 isoform b [Homo sapiens]
Length = 996
Score = 32.7 bits (73), Expect = 1.7
Identities = 13/38 (34%), Positives = 24/38 (63%)
Query: 537 SEDKWWYRVIIHRVLEKQEVEVFYPDFGNIGIVQKSSL 574
SED+ WYR + +++ ++ V Y D+GN I+ +S +
Sbjct: 67 SEDQCWYRCKVLKIISVEKCLVRYIDYGNTEILNRSDI 104
>gi|45827771 autoantigen RCD8 [Homo sapiens]
Length = 1401
Score = 32.7 bits (73), Expect = 1.7
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 6/96 (6%)
Query: 836 SSDSSTLPKL---EEFCT---SLTQSEQSADGSQSEPNNSQTQPKQIQLSTAAPCSTTAV 889
S S T PKL + F T SL Q S S S ++S + + +A ST+AV
Sbjct: 583 SLSSETKPKLMTPDAFMTPSASLQQITASPSSSSSGSSSSSSSSSSSLTAVSAMSSTSAV 642
Query: 890 DDSAEKPSGSVESSPEILKNEDFSSSRAITLYKDKR 925
D S +P + SP++ + + S + +L R
Sbjct: 643 DPSLTRPPEELTLSPKLQLDGSLTMSSSGSLQASPR 678
>gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens]
Length = 4374
Score = 32.3 bits (72), Expect = 2.2
Identities = 27/123 (21%), Positives = 46/123 (37%), Gaps = 12/123 (9%)
Query: 800 GLVNGTKVEVHKPEVLGAQEKNTGTNRTQKQLD-----------INGSSDSSTLPKLEEF 848
GLVN H ++ NT N K L+ + GS +S+ K E+
Sbjct: 2220 GLVNDLARVPHSLDLSSPNMANT-VNAALKPLETLSRIVNQPSSLFGSKSASSKNKSEQD 2278
Query: 849 CTSLTQSEQSADGSQSEPNNSQTQPKQIQLSTAAPCSTTAVDDSAEKPSGSVESSPEILK 908
+Q S EP ++ Q + ++ +D AE S + PE+L
Sbjct: 2279 AQGASQDSSSNQQDPGEPGEAEVQEEDHDVTQTEVADGDIMDGEAETDSVVIAGQPEVLS 2338
Query: 909 NED 911
+++
Sbjct: 2339 SQE 2341
>gi|87299628 biorientation of chromosomes in cell division 1-like
[Homo sapiens]
Length = 3051
Score = 32.3 bits (72), Expect = 2.2
Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 26/110 (23%)
Query: 847 EFCTSLTQSEQSADGSQSEPNNSQTQPKQIQLSTAAPCSTTAVD------DSAEKPSGSV 900
E TSL Q E SA + +E +N++T + + + P + T+ D D A+K +
Sbjct: 206 ETITSLNQ-EASAARASTETSNAKTSERASKKLPSQPTTDTSTDKERTSEDMADKEKSTA 264
Query: 901 ESSPEIL----KNEDFSS---------------SRAITLYKDKRQESVDQ 931
+S E L K+E+FS + I L KD +QES +Q
Sbjct: 265 DSGGEGLETAPKSEEFSDLPCPVEEIKNYTKEHNNLILLNKDVQQESSEQ 314
>gi|55769554 protein tyrosine phosphatase, receptor type, f
polypeptide (PTPRF), interacting protein (liprin), alpha
4 [Homo sapiens]
Length = 701
Score = 32.3 bits (72), Expect = 2.2
Identities = 53/213 (24%), Positives = 78/213 (36%), Gaps = 46/213 (21%)
Query: 751 MGKGGDAASHLFT---ASLGGKNQYSSCKEMPQKDW---------------CFSTPKDTW 792
MG D L T A G +YS+ +E KDW F + +
Sbjct: 1 MGSAADVRFSLGTTTHAPPGVHRRYSALREESAKDWETSPLPGMLAPAAGPAFDSDPEIS 60
Query: 793 D-DSWQPSGLVNGTKVEVHKPEVLGAQEKNTGTNRTQKQLD--------INGSSDSSTLP 843
D D +P GLV +V P G + T Q+QLD I +S+ L
Sbjct: 61 DVDEDEPGGLVGSA--DVVSPS--GHSDAQTLAMMLQEQLDAINEEIRMIQEEKESTEL- 115
Query: 844 KLEEFCTSLTQSEQSADGSQSEPNNSQTQPKQIQLSTAAPCSTTAVDDSAEKPSGSVESS 903
+ EE T +T A KQ++ + P S TA+ ++ P S S+
Sbjct: 116 RAEEIETRVTSGSMEA-----------LNLKQLRKRGSIPTSLTALSLASASPPLSGRST 164
Query: 904 PEILKN---EDFSSSRAITLYKDKRQESVDQLS 933
P++ +D +TL D R+ LS
Sbjct: 165 PKLTSRSAAQDLDRMGVMTLPSDLRKHRRKLLS 197
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 32.0 bits (71), Expect = 2.9
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 13/115 (11%)
Query: 352 LHVEFRKGHQDL---------LVFDADKKPLPPVQSDKKIEAKACVSSPPRNS--LSTAA 400
L E GHQ L + +A + V+ + +EAK+ +SP L+
Sbjct: 700 LDTEVASGHQGLENGVTASGDVCLEALRLEEKEVRHHRILEAKSIQTSPTEEGGVLTLPP 759
Query: 401 VKETVWN--CPSKKQKEPQQKICKKPNLVVKPLQLQVETNKSELNLAMANHDIPP 453
V CP + PQ K C + +L+V P ++ V+ + + +++ PP
Sbjct: 760 VDGLPGRPPCPPGAESGPQTKFCSEISLIVSPRRISVQLDSHQPTQSISQPPPPP 814
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.132 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,167,989
Number of Sequences: 37866
Number of extensions: 1768394
Number of successful extensions: 5468
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 5327
Number of HSP's gapped (non-prelim): 188
length of query: 981
length of database: 18,247,518
effective HSP length: 112
effective length of query: 869
effective length of database: 14,006,526
effective search space: 12171671094
effective search space used: 12171671094
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.