LOC100129278 7358

Name: LOC100129278	Sequence: fasta or formatted (2080aa)		NCBI GI: 169164192
Description: PREDICTED: similar to tudor domain containing 1		Not currently referenced in the text
Other entries for this name: alt prot {2080aa} PREDICTED: similar to tudor domain containing 1 alt mRNA {2080aa} PREDICTED: similar to tudor domain containing 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.8 100 2 C cysteine 2.6 55 2 D aspartate 4.7 98 2 E glutamate 6.8 142 3 F phenylalanine 5.0 104 2 G glycine 3.8 80 1 H histidine 2.0 41 2 I isoleucine 6.9 143 2 K lysine 7.8 162 2 L leucine 10.7 222 4 M methionine 1.8 37 1 N asparagine 5.3 110 2 P proline 5.1 107 4 Q glutamine 4.4 91 2 R arginine 3.8 80 3 S serine 8.7 181 3 T threonine 3.7 76 2 V valine 6.6 138 2 W tryptophan 1.5 31 1 Y tyrosine 3.9 82 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to tudor domain containing 1 [Ho... LOC100129278 1.000 PREDICTED: similar to tudor domain containing 1 [Ho... LOC100129278 1.000 PREDICTED: similar to tudor domain containing 1 [Ho... TDRD6 0.131 tudor domain containing 6 TDRD1 0.027 tudor domain containing 1 TDRD5 0.013 tudor domain containing 5 RNF17 0.010 ring finger protein 17 TDRKH 0.008 tudor and KH domain containing isoform a TDRKH 0.008 tudor and KH domain containing isoform b TDRKH 0.008 tudor and KH domain containing isoform a TDRKH 0.008 tudor and KH domain containing isoform a TDRD7 0.008 tudor domain containing 7 TDRD9 0.008 tudor domain containing 9 SND1 0.005 staphylococcal nuclease domain containing 1 TDRD12 0.005 tudor domain containing 12 AKAP1 0.004 A-kinase anchor protein 1 precursor STK31 0.003 serine/threonine kinase 31 isoform b STK31 0.003 serine/threonine kinase 31 isoform a STK31 0.003 serine/threonine kinase 31 isoform b SPEG 0.003 SPEG complex locus TDRD3 0.003 tudor domain containing 3 isoform 2 TDRD3 0.003 tudor domain containing 3 isoform 1 TDRD3 0.003 tudor domain containing 3 isoform 2 CCDC17 0.003 coiled-coil domain containing 17 BRSK1 0.002 BR serine/threonine kinase 1 BRSK2 0.002 BR serine/threonine kinase 2 UTRN 0.002 utrophin SLIT1 0.002 slit homolog 1 TRIML1 0.002 tripartite motif family-like 1 PDIK1L 0.002 PDLIM1 interacting kinase 1 like Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.