Guide to the Human Genome
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Name: LRRC2 Sequence: fasta or formatted (371aa) NCBI GI: 27545328
Description:

leucine rich repeat containing 2

Referenced in:

Leucine-rich Repeat Family

Other entries for this name:
alt mRNA [371aa] leucine rich repeat containing 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.2         12           1
 C cysteine            2.2          8           1
 D aspartate           5.7         21           1
 E glutamate           8.9         33           2
 F phenylalanine       3.8         14           1
 G glycine             3.0         11           1
 H histidine           1.9          7           1
 I isoleucine          5.9         22           2
 K lysine              8.1         30           2
 L leucine            14.0         52           2
 M methionine          2.2          8           1
 N asparagine          5.4         20           2
 P proline             4.3         16           2
 Q glutamine           4.0         15           1
 R arginine            4.9         18           2
 S serine              8.4         31           2
 T threonine           4.3         16           2
 V valine              5.9         22           3
 W tryptophan          1.6          6           1
 Y tyrosine            2.4          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   leucine rich repeat containing 2 
LRRC2                 1.000   leucine rich repeat containing 2 
LRRC39                0.231   leucine rich repeat containing 39 
LOC401387             0.108   leucine-rich repeat and death domain-containing pro...
LRRIQ4                0.107   leucine-rich repeats and IQ motif containing 4 [Hom...
LRRC30                0.107   leucine rich repeat containing 30 
LRRC1                 0.106   leucine rich repeat containing 1 
ERBB2IP               0.103   ERBB2 interacting protein isoform 7 
ERBB2IP               0.103   ERBB2 interacting protein isoform 2 
LRRC40                0.103   leucine rich repeat containing 40 
LRRC7                 0.102   leucine rich repeat containing 7 
SHOC2                 0.093   soc-2 suppressor of clear homolog 
MFHAS1                0.092   malignant fibrous histiocytoma amplified sequence 1...
SCRIB                 0.089   scribble isoform b 
SCRIB                 0.089   scribble isoform a 
RSU1                  0.085   ras suppressor protein 1 isoform 1 
FLII                  0.085   flightless I homolog 
LRRC57                0.083   leucine rich repeat containing 57 
LRDD                  0.083   leucine rich repeat and death domain containing prot...
LRDD                  0.083   leucine rich repeat and death domain containing prot...
LRRC8D                0.082   leucine rich repeat containing 8 family, member D [...
LRRC8D                0.082   leucine rich repeat containing 8 family, member D [H...
LRRC10                0.081   leucine rich repeat containing 10 
LRRC69                0.081   leucine rich repeat containing 69 
LRRC28                0.078   leucine rich repeat containing 28 
RSU1                  0.076   ras suppressor protein 1 isoform 2 
LRRC8B                0.076   leucine rich repeat containing 8 family, member B [...
LRRC8B                0.076   leucine rich repeat containing 8 family, member B [H...
LRRC8A                0.072   leucine rich repeat containing 8 family, member A [H...
LRRC8A                0.072   leucine rich repeat containing 8 family, member A [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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