Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 40254866
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|40254866 chromatin modifying protein 2B [Homo sapiens]
(213 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|40254866 chromatin modifying protein 2B [Homo sapiens] 404 e-113
gi|38372933 chromatin modifying protein 2A [Homo sapiens] 130 1e-30
gi|7656922 chromatin modifying protein 2A [Homo sapiens] 130 1e-30
gi|7706353 vacuolar protein sorting 24 isoform 1 [Homo sapiens] 95 4e-20
gi|31542306 chromatin modifying protein 1B [Homo sapiens] 65 4e-11
gi|54144646 vacuolar protein sorting 24 isoform 2 [Homo sapiens] 62 3e-10
gi|28827795 chromatin modifying protein 4B [Homo sapiens] 48 7e-06
gi|40548422 chromatin modifying protein 4A [Homo sapiens] 41 9e-04
gi|148612801 KIAA1009 protein [Homo sapiens] 40 0.002
gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [H... 39 0.003
gi|156104908 myosin heavy chain 6 [Homo sapiens] 39 0.003
gi|22748643 chromatin modifying protein 4C [Homo sapiens] 39 0.004
gi|42794779 myosin 18A isoform b [Homo sapiens] 38 0.007
gi|28416946 myosin 18A isoform a [Homo sapiens] 38 0.007
gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens] 37 0.010
gi|87116683 proline/serine-rich coiled-coil 2 [Homo sapiens] 37 0.010
gi|23503325 mirror-image polydactyly 1 [Homo sapiens] 37 0.012
gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo s... 36 0.028
gi|26080431 ATPase family, AAA domain containing 5 [Homo sapiens] 35 0.036
gi|198041734 kinesin light chain 2 isoform 1 [Homo sapiens] 35 0.036
gi|198041731 kinesin light chain 2 isoform 1 [Homo sapiens] 35 0.036
gi|12383062 kinesin light chain 2 isoform 1 [Homo sapiens] 35 0.036
gi|31982906 cingulin-like 1 [Homo sapiens] 35 0.036
gi|19924131 RAD50 homolog isoform 2 [Homo sapiens] 35 0.047
gi|19924129 RAD50 homolog isoform 1 [Homo sapiens] 35 0.047
gi|217272804 hyaluronan-mediated motility receptor isoform d [Ho... 35 0.047
gi|217272802 hyaluronan-mediated motility receptor isoform a [Ho... 35 0.047
gi|217416398 hyaluronan-mediated motility receptor isoform c [Ho... 35 0.047
gi|217416394 hyaluronan-mediated motility receptor isoform b [Ho... 35 0.047
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 35 0.047
>gi|40254866 chromatin modifying protein 2B [Homo sapiens]
Length = 213
Score = 404 bits (1038), Expect = e-113
Identities = 213/213 (100%), Positives = 213/213 (100%)
Query: 1 MASLFKKKTVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACKV 60
MASLFKKKTVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACKV
Sbjct: 1 MASLFKKKTVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACKV 60
Query: 61 LAKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQK 120
LAKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQK
Sbjct: 61 LAKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQK 120
Query: 121 TLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEISGKMAK 180
TLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEISGKMAK
Sbjct: 121 TLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEISGKMAK 180
Query: 181 APSAARSLPSASTSKATISDEEIERQLKALGVD 213
APSAARSLPSASTSKATISDEEIERQLKALGVD
Sbjct: 181 APSAARSLPSASTSKATISDEEIERQLKALGVD 213
>gi|38372933 chromatin modifying protein 2A [Homo sapiens]
Length = 222
Score = 130 bits (326), Expect = 1e-30
Identities = 69/216 (31%), Positives = 123/216 (56%), Gaps = 8/216 (3%)
Query: 6 KKKTVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACKVLAKQL 65
++KT ++++++ R L R + R+R LE QEK++ +IKKMAK G +A +++AK L
Sbjct: 7 RRKTPEELLRQNQRALNRAMRELDRERQKLETQEKKIIADIKKMAKQGQMDAVRIMAKDL 66
Query: 66 VHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTM 125
V R+ + + + + ++S + + + S MA AM K M +N+++ + + M
Sbjct: 67 VRTRRYVRKFVLMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMGTMNRQLKLPQIQKIM 126
Query: 126 QNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEISGKMAKAPSAA 185
F+++ M+M EEM+ND +DD +DEEES +V+QVLDE+G+ ++ +++ PS
Sbjct: 127 MEFERQAEIMDMKEEMMNDAIDDAMGDEEDEEESDAVVSQVLDELGLSLTDELSNLPSTG 186
Query: 186 RSL--------PSASTSKATISDEEIERQLKALGVD 213
SL A+ S +D ++E +LK L D
Sbjct: 187 GSLSVAAGGKKAEAAASALADADADLEERLKNLRRD 222
>gi|7656922 chromatin modifying protein 2A [Homo sapiens]
Length = 222
Score = 130 bits (326), Expect = 1e-30
Identities = 69/216 (31%), Positives = 123/216 (56%), Gaps = 8/216 (3%)
Query: 6 KKKTVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACKVLAKQL 65
++KT ++++++ R L R + R+R LE QEK++ +IKKMAK G +A +++AK L
Sbjct: 7 RRKTPEELLRQNQRALNRAMRELDRERQKLETQEKKIIADIKKMAKQGQMDAVRIMAKDL 66
Query: 66 VHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTM 125
V R+ + + + + ++S + + + S MA AM K M +N+++ + + M
Sbjct: 67 VRTRRYVRKFVLMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMGTMNRQLKLPQIQKIM 126
Query: 126 QNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEISGKMAKAPSAA 185
F+++ M+M EEM+ND +DD +DEEES +V+QVLDE+G+ ++ +++ PS
Sbjct: 127 MEFERQAEIMDMKEEMMNDAIDDAMGDEEDEEESDAVVSQVLDELGLSLTDELSNLPSTG 186
Query: 186 RSL--------PSASTSKATISDEEIERQLKALGVD 213
SL A+ S +D ++E +LK L D
Sbjct: 187 GSLSVAAGGKKAEAAASALADADADLEERLKNLRRD 222
>gi|7706353 vacuolar protein sorting 24 isoform 1 [Homo sapiens]
Length = 222
Score = 95.1 bits (235), Expect = 4e-20
Identities = 57/207 (27%), Positives = 112/207 (54%), Gaps = 6/207 (2%)
Query: 6 KKKTVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACKVLAKQL 65
++K +++ E + ++R R + R ++++E++++ +K AK G K+ C VLAK++
Sbjct: 8 QEKPPKELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKDVCIVLAKEM 67
Query: 66 VHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTM 125
+ RK ++ +A + + S+ K + +++AG++ + + M+A+ + + TM
Sbjct: 68 IRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQATM 127
Query: 126 QNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEI-SGKMAKAPS- 183
+ KE MK + EEM+ DT F+ DD+EE ++ +D I EI +G + KAPS
Sbjct: 128 RELSKEMMKAGIIEEMLEDT----FESMDDQEEMEEEAEMEIDRILFEITAGALGKAPSK 183
Query: 184 AARSLPSASTSKATISDEEIERQLKAL 210
+LP A + E+ E + +AL
Sbjct: 184 VTDALPEPEPPGAMAASEDEEEEEEAL 210
>gi|31542306 chromatin modifying protein 1B [Homo sapiens]
Length = 199
Score = 65.1 bits (157), Expect = 4e-11
Identities = 37/190 (19%), Positives = 93/190 (48%), Gaps = 5/190 (2%)
Query: 21 LRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACKVLAKQLVHLRKQKTRTFAVSS 80
L+ + + R +K+EK + +IKK + GN E ++ A+ + + Q +S+
Sbjct: 11 LKFAAKELSRSAKKCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQAVNFLRMSA 70
Query: 81 KVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEE 140
+V +++ + + + K+ +M+ K+M A K M+ +K M F+ + +++ +
Sbjct: 71 RVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKTMNLEKISALMDKFEHQFETLDVQTQ 130
Query: 141 MINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEISGKMAKAPSAARSLPSASTSKATISD 200
+ DT+ + + + ++ ++ DE G++++ ++ + + S TS A+
Sbjct: 131 QMEDTMSSTTTLTTPQNQVDMLLQEMADEAGLDLNMELPQGQTG-----SVGTSVASAEQ 185
Query: 201 EEIERQLKAL 210
+E+ ++L L
Sbjct: 186 DELSQRLARL 195
>gi|54144646 vacuolar protein sorting 24 isoform 2 [Homo sapiens]
Length = 156
Score = 62.4 bits (150), Expect = 3e-10
Identities = 41/148 (27%), Positives = 76/148 (51%), Gaps = 6/148 (4%)
Query: 65 LVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQT 124
++ RK ++ +A + + S+ K + +++AG++ + + M+A+ + + T
Sbjct: 1 MIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQAT 60
Query: 125 MQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEI-SGKMAKAPS 183
M+ KE MK + EEM+ DT F+ DD+EE ++ +D I EI +G + KAPS
Sbjct: 61 MRELSKEMMKAGIIEEMLEDT----FESMDDQEEMEEEAEMEIDRILFEITAGALGKAPS 116
Query: 184 -AARSLPSASTSKATISDEEIERQLKAL 210
+LP A + E+ E + +AL
Sbjct: 117 KVTDALPEPEPPGAMAASEDEEEEEEAL 144
>gi|28827795 chromatin modifying protein 4B [Homo sapiens]
Length = 224
Score = 47.8 bits (112), Expect = 7e-06
Identities = 48/196 (24%), Positives = 83/196 (42%), Gaps = 9/196 (4%)
Query: 15 KEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACKVLAKQLVHLRKQKTR 74
+E + LR T+ + + + LEK+ +Q EL K NK A K+ KQ +
Sbjct: 23 QEAIQRLRDTEEMLSKKQEFLEKKIEQ-ELTAAKKHGTKNKRAALQALKRKKRYEKQLAQ 81
Query: 75 TFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENMK 134
S + + N+ ++ M AK M+A + MD K + MQ+ +
Sbjct: 82 IDGTLSTIEFQREALENANTNTEVLKNMGYAAKAMKAAHDNMDIDKVDELMQDIADQQEL 141
Query: 135 MEMTEEMINDTL--DDIFDGSDDEEESQDIVNQVLDEIGIEISG----KMAKAPSAARSL 188
E I+ + + FD + E +++ + LD+ +EISG + PS A L
Sbjct: 142 AEEISTAISKPVGFGEEFDEDELMAELEELEQEELDKNLLEISGPETVPLPNVPSIA--L 199
Query: 189 PSASTSKATISDEEIE 204
PS K D++++
Sbjct: 200 PSKPAKKKEEEDDDMK 215
>gi|40548422 chromatin modifying protein 4A [Homo sapiens]
Length = 265
Score = 40.8 bits (94), Expect = 9e-04
Identities = 44/207 (21%), Positives = 86/207 (41%), Gaps = 7/207 (3%)
Query: 7 KKTVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACKVLAKQLV 66
KK +E ++L+ T++ +I+ + LE Q+ Q EL+ K NK A ++
Sbjct: 55 KKEKGPTPEEAIQKLKETEKILIKKQEFLE-QKIQQELQTAKKYGTKNKRAALQALRRKK 113
Query: 67 HLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQ 126
+Q +T S + + + ++ M A++M+ + MD K + M
Sbjct: 114 RFEQQLAQTDGTLSTLEFQREAIENATTNAEVLRTMELAAQSMKKAYQDMDIDKVDELMT 173
Query: 127 NFQKENMKMEMTEEMINDTL---DDIFDG---SDDEEESQDIVNQVLDEIGIEISGKMAK 180
+ ++ + + I+ + DD+ + + EE Q+ + Q L +G + K
Sbjct: 174 DITEQQEVAQQISDAISRPMGFGDDVDEDELLEELEELEQEELAQELLNVGDKEEEPSVK 233
Query: 181 APSAARSLPSASTSKATISDEEIERQL 207
PS + A + DEE +QL
Sbjct: 234 LPSVPSTHLPAGPAPKVDEDEEALKQL 260
>gi|148612801 KIAA1009 protein [Homo sapiens]
Length = 1403
Score = 39.7 bits (91), Expect = 0.002
Identities = 37/162 (22%), Positives = 72/162 (44%), Gaps = 20/162 (12%)
Query: 6 KKKTVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACKVLAKQL 65
KK + ++E + RG Q I + +A ++EK+LE +++++ K KE
Sbjct: 611 KKLLMFKRVQEAEDKWRGAQALIEQIKATFSEKEKELENKLEELKKQQEKE--------- 661
Query: 66 VHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTM 125
L K + + +K++S K A T + ++ + K++ Q+TL +
Sbjct: 662 --LFKLNQDNYILQAKLSSFEETNKKQRWLHFGEAADPVTGEKLKQIQKEIQEQETL--L 717
Query: 126 QNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVL 167
Q +Q+EN E + + + D+ + + EE NQ L
Sbjct: 718 QGYQQEN-------ERLYNQVKDLQEQNKKNEERMFKENQSL 752
>gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [Homo
sapiens]
Length = 1940
Score = 38.9 bits (89), Expect = 0.003
Identities = 42/208 (20%), Positives = 87/208 (41%), Gaps = 23/208 (11%)
Query: 5 FKKKTVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNK--EACKVLA 62
F+KK IKE + + I +RA K EKQ +++ ++ + EA V +
Sbjct: 1105 FQKK-----IKELQARIEELEEEIEAERATRAKTEKQRSDYARELEELSERLEEAGGVTS 1159
Query: 63 KQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTL 122
Q+ +K++ + + + Q + M +A A ++ + +++D
Sbjct: 1160 TQIELNKKREAEFLKLRRDLEEATLQHEAM-----VAALRKKHADSVAELGEQID----- 1209
Query: 123 QTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEISGKMAKAP 182
N Q+ K+E + +DD+ + +S+ + ++ + ++S K
Sbjct: 1210 ----NLQRVKQKLEKEKSEFKLEIDDLSSSMESVSKSKANLEKICRTLEDQLSEARGKNE 1265
Query: 183 SAARSLPSASTSKATISDE--EIERQLK 208
RSL +T K+ + E E+ RQL+
Sbjct: 1266 EIQRSLSELTTQKSRLQTEAGELSRQLE 1293
Score = 35.8 bits (81), Expect = 0.028
Identities = 45/222 (20%), Positives = 90/222 (40%), Gaps = 28/222 (12%)
Query: 1 MASLFKKKTVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMA---------K 51
M + +KK D V E ++ QR + LEK++ + +LEI ++ K
Sbjct: 1189 MVAALRKKHADSVA-ELGEQIDNLQRV----KQKLEKEKSEFKLEIDDLSSSMESVSKSK 1243
Query: 52 IGNKEACKVLAKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQA 111
++ C+ L QL R + + ++ ++TQ + ++ AG +S + ++
Sbjct: 1244 ANLEKICRTLEDQLSEARGKNEE---IQRSLSELTTQKSRLQTE---AGELSRQLEEKES 1297
Query: 112 VNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEI- 170
+ ++ K T Q E +K ++ EE N + + D++ + +E
Sbjct: 1298 IVSQLSRSKQAFTQQT---EELKRQLEEE--NKAKNALAHALQSSRHDCDLLREQYEEEQ 1352
Query: 171 --GIEISGKMAKAPSAARSLPSASTSKATISDEEIERQLKAL 210
E+ ++KA S + + A EE+E K L
Sbjct: 1353 EGKAELQRALSKANSEVAQWRTKYETDAIQRTEELEEAKKKL 1394
>gi|156104908 myosin heavy chain 6 [Homo sapiens]
Length = 1939
Score = 38.9 bits (89), Expect = 0.003
Identities = 48/216 (22%), Positives = 96/216 (44%), Gaps = 17/216 (7%)
Query: 6 KKKTVDDVIKEQNRELRGTQ-------RAIIRDRAALEKQEKQLELEIKKMAKIGNKEAC 58
KKK D I +QN ++ Q + + ++A +E+ E++LE E AK+ ++
Sbjct: 1083 KKKEFD--INQQNSKIEDEQVLALQLQKKLKENQARIEELEEELEAERTARAKV--EKLR 1138
Query: 59 KVLAKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMK--MAGAMSTTAKTMQAVNKK- 115
L+++L + ++ +S M+ + + +M+ + A T A+ KK
Sbjct: 1139 SDLSRELEEISERLEEAGGATSVQIEMNKKREAEFQKMRRDLEEATLQHEATAAALRKKH 1198
Query: 116 MDPQKTL-QTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEI 174
D L + + N Q+ K+E + LDD+ + +++ + +V + +
Sbjct: 1199 ADSVAELGEQIDNLQRVKQKLEKEKSEFKLELDDVTSNMEQIIKAKANLEKVSRTLEDQA 1258
Query: 175 SGKMAKAPSAARSLPSASTSKATISDE--EIERQLK 208
+ K A RSL +T +A + E E+ RQL+
Sbjct: 1259 NEYRVKLEEAQRSLNDFTTQRAKLQTENGELARQLE 1294
>gi|22748643 chromatin modifying protein 4C [Homo sapiens]
Length = 233
Score = 38.5 bits (88), Expect = 0.004
Identities = 45/200 (22%), Positives = 87/200 (43%), Gaps = 16/200 (8%)
Query: 21 LRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACKVLAKQLVHLRKQKTRTFAVSS 80
LR T+ + + + LE + Q E+ + K NK A K+ KQ T+ S
Sbjct: 29 LRETEEMLGKKQEYLENRI-QREIALAKKHGTQNKRAALQALKRKKRFEKQLTQIDGTLS 87
Query: 81 KVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQNF-QKENMKMEMTE 139
+ + ++ ++ M AK M++V++ MD K MQ +++++ E++E
Sbjct: 88 TIEFQREALENSHTNTEVLRNMGFAAKAMKSVHENMDLNKIDDLMQEITEQQDIAQEISE 147
Query: 140 EM-----INDTLDDIFDGSDDEEESQDIVNQVLDEIGIE--ISGKMAKAP-------SAA 185
D D+ ++ EE Q+ +N+ + I + S + P S A
Sbjct: 148 AFSQRVGFGDDFDEDELMAELEELEQEELNKKMTNIRLPNVPSSSLPAQPNRKPGMSSTA 207
Query: 186 RSLPSASTSKATISDEEIER 205
R +AS+ +A D++I++
Sbjct: 208 RRSRAASSQRAEEEDDDIKQ 227
>gi|42794779 myosin 18A isoform b [Homo sapiens]
Length = 2039
Score = 37.7 bits (86), Expect = 0.007
Identities = 38/201 (18%), Positives = 89/201 (44%), Gaps = 10/201 (4%)
Query: 17 QNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACKVLAKQLVHLRKQKTRTF 76
+N EL QR + + ++ ++ +L+ +K+ + K+ A L ++K
Sbjct: 1452 RNHELEKKQRRFDSELSQAHEEAQREKLQREKLQR--EKDMLLAEAFSLKQQLEEKDMDI 1509
Query: 77 A-VSSKVTSMSTQTKVMNSQ-MKMAGAMSTTAKTMQAVNKKMDPQKT-----LQTMQNFQ 129
A + KV S+ + + ++SQ K +++ K ++ + K+ Q+ T+Q +
Sbjct: 1510 AGFTQKVVSLEAELQDISSQESKDEASLAKVKKQLRDLEAKVKDQEEELDEQAGTIQMLE 1569
Query: 130 KENMKMEMTEEMINDTLDDIFDGSDDE-EESQDIVNQVLDEIGIEISGKMAKAPSAARSL 188
+ +++EM E + T + D+E EE++ + L ++ +++ + R
Sbjct: 1570 QAKLRLEMEMERMRQTHSKEMESRDEEVEEARQSCQKKLKQMEVQLEEEYEDKQKVLREK 1629
Query: 189 PSASTSKATISDEEIERQLKA 209
AT+SD+ R ++
Sbjct: 1630 RELEGKLATLSDQVNRRDFES 1650
>gi|28416946 myosin 18A isoform a [Homo sapiens]
Length = 2054
Score = 37.7 bits (86), Expect = 0.007
Identities = 38/201 (18%), Positives = 89/201 (44%), Gaps = 10/201 (4%)
Query: 17 QNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACKVLAKQLVHLRKQKTRTF 76
+N EL QR + + ++ ++ +L+ +K+ + K+ A L ++K
Sbjct: 1452 RNHELEKKQRRFDSELSQAHEEAQREKLQREKLQR--EKDMLLAEAFSLKQQLEEKDMDI 1509
Query: 77 A-VSSKVTSMSTQTKVMNSQ-MKMAGAMSTTAKTMQAVNKKMDPQKT-----LQTMQNFQ 129
A + KV S+ + + ++SQ K +++ K ++ + K+ Q+ T+Q +
Sbjct: 1510 AGFTQKVVSLEAELQDISSQESKDEASLAKVKKQLRDLEAKVKDQEEELDEQAGTIQMLE 1569
Query: 130 KENMKMEMTEEMINDTLDDIFDGSDDE-EESQDIVNQVLDEIGIEISGKMAKAPSAARSL 188
+ +++EM E + T + D+E EE++ + L ++ +++ + R
Sbjct: 1570 QAKLRLEMEMERMRQTHSKEMESRDEEVEEARQSCQKKLKQMEVQLEEEYEDKQKVLREK 1629
Query: 189 PSASTSKATISDEEIERQLKA 209
AT+SD+ R ++
Sbjct: 1630 RELEGKLATLSDQVNRRDFES 1650
>gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens]
Length = 1979
Score = 37.4 bits (85), Expect = 0.010
Identities = 41/174 (23%), Positives = 83/174 (47%), Gaps = 15/174 (8%)
Query: 6 KKKTVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGN-KEACKVLAKQ 64
KK+ + +KE++ +L Q + + AL K E + +K +G+ KE L ++
Sbjct: 812 KKEIFIEKLKERSSKL---QEELDKYSQALRKNEILRQTIEEKDRSLGSMKEENNHLQEE 868
Query: 65 LVHLRKQKTRTFAVSS-----KVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQ 119
L LR++++RT V+ VT ++++ +N+ + + K Q + + +
Sbjct: 869 LERLREEQSRTAPVADPKTLDSVTELASEVSQLNT---IKEHLEEEIKHHQKIIEDQNQS 925
Query: 120 KT--LQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEES-QDIVNQVLDEI 170
K LQ++Q +KE + E +N T +F D+E +S Q + Q+ ++
Sbjct: 926 KMQLLQSLQEQKKEMDEFRYQHEQMNATHTQLFLEKDEEIKSLQKTIEQIKTQL 979
Score = 29.6 bits (65), Expect = 2.0
Identities = 22/95 (23%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 112 VNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIG 171
++K + QKT+Q +Q + E+ K E + D + DI E +DI+ + +++
Sbjct: 284 LSKIYEMQKTIQVLQIEKVESTKKM---EQLEDKIKDINKKLSSAENDRDILRREQEQLN 340
Query: 172 IEISGKMAKAPS----AARSLPSASTSKATISDEE 202
+E M + + ++ PSA T++++E
Sbjct: 341 VEKRQIMEECENLKLECSKLQPSAVKQSDTMTEKE 375
Score = 28.9 bits (63), Expect = 3.4
Identities = 42/212 (19%), Positives = 87/212 (41%), Gaps = 24/212 (11%)
Query: 3 SLFKKKTVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACKVLA 62
S+ +K+T+ I+E +R+ + + +I + L KQ+ + + I K+ + N E +V
Sbjct: 486 SISEKETLIAEIEELDRQNQEATKHMILIKDQLSKQQNEGDSIISKLKQDLNDEKKRV-- 543
Query: 63 KQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDP-QKT 121
QL + T+ V + K++ S++ + T K V +D K+
Sbjct: 544 HQLEDDKMDITKELDVQKE--------KLIQSEVALNDLHLTKQKLEDKVENLVDQLNKS 595
Query: 122 LQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEISGKMAKA 181
++ + QKEN +E+ E + +EEE I N+++ + + +
Sbjct: 596 QESNVSIQKEN--LELKEHI-----------RQNEEELSRIRNELMQSLNQDSNSNFKDT 642
Query: 182 PSAARSLPSASTSKATISDEEIERQLKALGVD 213
R + + E++ LK + D
Sbjct: 643 LLKEREAEVRNLKQNLSELEQLNENLKKVAFD 674
>gi|87116683 proline/serine-rich coiled-coil 2 [Homo sapiens]
Length = 1989
Score = 37.4 bits (85), Expect = 0.010
Identities = 42/180 (23%), Positives = 72/180 (40%), Gaps = 7/180 (3%)
Query: 15 KEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACKVLAKQLVHLRKQK-T 73
KEQN R + I+ ++ E +E+ EL+++ +A + + +Q++ K+K T
Sbjct: 343 KEQNLTRRISTSDILSEKKLGEDEEELSELQLRLLALQSASKKWQQKEQQVMKESKEKLT 402
Query: 74 RTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENM 133
+T V KV T TK +++ A K KK+ QK + + +
Sbjct: 403 KTKTVQQKV---KTSTKTHSAKKVSTTAKQALRKQQTKAWKKLQQQKEQERQKEEDQRKQ 459
Query: 134 KMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEISGKMAKAPSAARSLPSAST 193
E + + I D S+ EE+ + V G S + P RSL T
Sbjct: 460 AEEEERRKREEEIRKIRDLSNQEEQYNRFMKLV---GGKRRSRSKSSDPDLRRSLDKQPT 516
>gi|23503325 mirror-image polydactyly 1 [Homo sapiens]
Length = 442
Score = 37.0 bits (84), Expect = 0.012
Identities = 35/183 (19%), Positives = 78/183 (42%), Gaps = 7/183 (3%)
Query: 27 AIIRDRAALEKQEKQLELEIKKMAKIGNKEA----CKVLAKQLVHLRKQKTRTFAVSSKV 82
AII DR K+ K + A I ++A CK L ++L H+++Q + +
Sbjct: 242 AIIVDRIYKTKECKMRITAEEMSALIEERDAALSKCKRLEQELHHVKEQNQTSANNMRHL 301
Query: 83 TSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMI 142
T+ + Q + + + K+ +Q K + +TL+ + K + E ++
Sbjct: 302 TAENNQERALKA--KLLSMQQARETAVQQYKKLEEEIQTLRVYYSLHKSLSQEENLKDQF 359
Query: 143 NDTLDDIFDGSDDEEESQDIVNQVLDEIGIEISGKMAKAPSAARSLPSASTSKATISDEE 202
N TL + + E I Q +E+ ++ + + + L A + + +++E+
Sbjct: 360 NYTLSTYEEALKNRENIVSITQQQNEELATQLQQALTERANMELQLQHAREA-SQVANEK 418
Query: 203 IER 205
+++
Sbjct: 419 VQK 421
>gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo
sapiens]
Length = 1935
Score = 35.8 bits (81), Expect = 0.028
Identities = 44/219 (20%), Positives = 99/219 (45%), Gaps = 18/219 (8%)
Query: 7 KKTVDDVIKEQNRELRGTQRAIIRDRAA---LEKQEKQL---------ELEIKKMAKIGN 54
K+ +D+ +K+++ EL I ++A L+K+ K+L ELE ++ A+
Sbjct: 1073 KQQLDERLKKKDFELNALNARIEDEQALGSQLQKKLKELQARIEELEEELEAERTARAKV 1132
Query: 55 KEACKVLAKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMK--MAGAMSTTAKTMQAV 112
++ L+++L + ++ +S M+ + + +M+ + A T A+
Sbjct: 1133 EKLRSDLSRELEEISERLEEAGGATSVQIEMNKKREAEFQKMRRDLEEATLQHEATAAAL 1192
Query: 113 NKK-MDPQKTL-QTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEI 170
KK D L + + N Q+ K+E + LDD+ + +++ + ++ +
Sbjct: 1193 RKKHADSVAELGEQIDNLQRVKQKLEKEKSEFKLELDDVTSNMEQIIKAKANLEKMCRTL 1252
Query: 171 GIEISGKMAKAPSAARSLPSASTSKATISDE--EIERQL 207
+++ +KA RS+ ++ +A + E E+ RQL
Sbjct: 1253 EDQMNEHRSKAEETQRSVNDLTSQRAKLQTENGELSRQL 1291
>gi|26080431 ATPase family, AAA domain containing 5 [Homo sapiens]
Length = 1844
Score = 35.4 bits (80), Expect = 0.036
Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 8/144 (5%)
Query: 33 AALEKQEKQLELE-IKKMAKIGNKEACKVLAKQLVHLRKQKTRTFA--VSSKVTSMSTQT 89
AA K E+E KK K + CK + K L L K + R FA S + +T
Sbjct: 10 AAAPPPVKDCEIEPCKKRKKDDDTSTCKTITKYLSPLGKTRDRVFAPPKPSNILDYFRKT 69
Query: 90 KVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQN--FQKENMKMEMTEEMINDTLD 147
N + ++ + V+ D L+ N F+K+ ++ ++ ++ N +
Sbjct: 70 SPTNEKTQLGKECKIKSPESVPVDSNKDCTTPLEMFSNVEFKKKRKRVNLSHQLNNIKTE 129
Query: 148 D---IFDGSDDEEESQDIVNQVLD 168
+ I SDD +E + N ++
Sbjct: 130 NEAPIEISSDDSKEDYSLNNDFVE 153
>gi|198041734 kinesin light chain 2 isoform 1 [Homo sapiens]
Length = 622
Score = 35.4 bits (80), Expect = 0.036
Identities = 35/154 (22%), Positives = 68/154 (44%), Gaps = 28/154 (18%)
Query: 21 LRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACKVLAKQLVHLRK---QKTRTFA 77
LRG RA++ A E E A+ G++E C +L + L + + A
Sbjct: 31 LRGEHRALLAPLVAPEAGE----------AEPGSQERCILLRRSLEAIELGLGEAQVILA 80
Query: 78 VSSKVTSMSTQTKVMNSQMK------------MAGAMSTTAKTMQAVNKKMDPQKTLQTM 125
+SS + ++ ++ + + +Q++ +AG ++ QAV + + ++ L M
Sbjct: 81 LSSHLGAVESEKQKLRAQVRRLVQENQWLREELAGTQQKLQRSEQAVAQLEEEKQHLLFM 140
Query: 126 QNFQKENMKMEMTEE---MINDTLDDIFDGSDDE 156
+K + EE + DTLDD+F D++
Sbjct: 141 SQIRKLDEDASPNEEKGDVPKDTLDDLFPNEDEQ 174
>gi|198041731 kinesin light chain 2 isoform 1 [Homo sapiens]
Length = 622
Score = 35.4 bits (80), Expect = 0.036
Identities = 35/154 (22%), Positives = 68/154 (44%), Gaps = 28/154 (18%)
Query: 21 LRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACKVLAKQLVHLRK---QKTRTFA 77
LRG RA++ A E E A+ G++E C +L + L + + A
Sbjct: 31 LRGEHRALLAPLVAPEAGE----------AEPGSQERCILLRRSLEAIELGLGEAQVILA 80
Query: 78 VSSKVTSMSTQTKVMNSQMK------------MAGAMSTTAKTMQAVNKKMDPQKTLQTM 125
+SS + ++ ++ + + +Q++ +AG ++ QAV + + ++ L M
Sbjct: 81 LSSHLGAVESEKQKLRAQVRRLVQENQWLREELAGTQQKLQRSEQAVAQLEEEKQHLLFM 140
Query: 126 QNFQKENMKMEMTEE---MINDTLDDIFDGSDDE 156
+K + EE + DTLDD+F D++
Sbjct: 141 SQIRKLDEDASPNEEKGDVPKDTLDDLFPNEDEQ 174
>gi|12383062 kinesin light chain 2 isoform 1 [Homo sapiens]
Length = 622
Score = 35.4 bits (80), Expect = 0.036
Identities = 35/154 (22%), Positives = 68/154 (44%), Gaps = 28/154 (18%)
Query: 21 LRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACKVLAKQLVHLRK---QKTRTFA 77
LRG RA++ A E E A+ G++E C +L + L + + A
Sbjct: 31 LRGEHRALLAPLVAPEAGE----------AEPGSQERCILLRRSLEAIELGLGEAQVILA 80
Query: 78 VSSKVTSMSTQTKVMNSQMK------------MAGAMSTTAKTMQAVNKKMDPQKTLQTM 125
+SS + ++ ++ + + +Q++ +AG ++ QAV + + ++ L M
Sbjct: 81 LSSHLGAVESEKQKLRAQVRRLVQENQWLREELAGTQQKLQRSEQAVAQLEEEKQHLLFM 140
Query: 126 QNFQKENMKMEMTEE---MINDTLDDIFDGSDDE 156
+K + EE + DTLDD+F D++
Sbjct: 141 SQIRKLDEDASPNEEKGDVPKDTLDDLFPNEDEQ 174
>gi|31982906 cingulin-like 1 [Homo sapiens]
Length = 1302
Score = 35.4 bits (80), Expect = 0.036
Identities = 38/165 (23%), Positives = 85/165 (51%), Gaps = 21/165 (12%)
Query: 13 VIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACKV--LAKQLVHLRK 70
+++E+N +L+G + R A L++Q + L+ + K + K ++ L + LVH RK
Sbjct: 826 LLQEENEKLQGRSEELERRVAQLQRQIEDLKGDEAKAKETLKKYEGEIRQLEEALVHARK 885
Query: 71 QKTRTFAVSSKVTSMSTQTKVMNSQMKMA-GAMSTTAKTMQAVNKKM----DPQKTLQTM 125
++ AVS++ + + ++++ A G +S T + + +++K+ + ++ L+ +
Sbjct: 886 EEKE--AVSAR--------RALENELEAAQGNLSQTTQEQKQLSEKLKEESEQKEQLRRL 935
Query: 126 QN-FQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDE 169
+N + E + T E + + DI + S + ++ NQ LDE
Sbjct: 936 KNEMENERWHLGKTIEKLQKEMADIVEAS--RTSTLELQNQ-LDE 977
Score = 35.4 bits (80), Expect = 0.036
Identities = 30/126 (23%), Positives = 62/126 (49%), Gaps = 13/126 (10%)
Query: 30 RDRAALEKQEKQLELEIKKMAKIGNKEACKVLAKQLVHLRKQKTRTFAVSSKVTSMSTQT 89
RDRA L+ ++LE ++K++ + E + L QK + +S ++ +M Q
Sbjct: 1167 RDRANLQLSNRRLERKVKELVMQVDDEH--------LSLTDQKDQ---LSLRLKAMKRQ- 1214
Query: 90 KVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDI 149
V ++ ++ S+ K + + ++MD + LQ N K++++++ + D +DD
Sbjct: 1215 -VEEAEEEIDRLESSKKKLQRELEEQMDMNEHLQGQLNSMKKDLRLKKLPSKVLDDMDDD 1273
Query: 150 FDGSDD 155
D S D
Sbjct: 1274 DDLSTD 1279
>gi|19924131 RAD50 homolog isoform 2 [Homo sapiens]
Length = 1173
Score = 35.0 bits (79), Expect = 0.047
Identities = 43/187 (22%), Positives = 83/187 (44%), Gaps = 26/187 (13%)
Query: 8 KTVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACKVLAKQLVH 67
K V+ I +Q +L+G + EKQEKQ +L+ N++ + +Q+ H
Sbjct: 664 KDVERKIAQQAAKLQGIDLDRTVQQVNQEKQEKQHKLDTVSSKIELNRKLIQDQQEQIQH 723
Query: 68 LR----KQKTRTFAVSS----------KVTSMSTQTKVMNSQMKMA----GAMSTTAKTM 109
L+ + K+ +S+ + +ST+ + + ++K A + TT +
Sbjct: 724 LKSTTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLYREIKDAKEQVSPLETTLEKF 783
Query: 110 Q-----AVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDD-EEESQDIV 163
Q +NKK K Q N KE K++ + D + I DG DD +++ + +
Sbjct: 784 QQEKEELINKKNTSNKIAQDKLNDIKE--KVKNIHGYMKDIENYIQDGKDDYKKQKETEL 841
Query: 164 NQVLDEI 170
N+V+ ++
Sbjct: 842 NKVIAQL 848
>gi|19924129 RAD50 homolog isoform 1 [Homo sapiens]
Length = 1312
Score = 35.0 bits (79), Expect = 0.047
Identities = 43/187 (22%), Positives = 83/187 (44%), Gaps = 26/187 (13%)
Query: 8 KTVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACKVLAKQLVH 67
K V+ I +Q +L+G + EKQEKQ +L+ N++ + +Q+ H
Sbjct: 803 KDVERKIAQQAAKLQGIDLDRTVQQVNQEKQEKQHKLDTVSSKIELNRKLIQDQQEQIQH 862
Query: 68 LR----KQKTRTFAVSS----------KVTSMSTQTKVMNSQMKMA----GAMSTTAKTM 109
L+ + K+ +S+ + +ST+ + + ++K A + TT +
Sbjct: 863 LKSTTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLYREIKDAKEQVSPLETTLEKF 922
Query: 110 Q-----AVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDD-EEESQDIV 163
Q +NKK K Q N KE K++ + D + I DG DD +++ + +
Sbjct: 923 QQEKEELINKKNTSNKIAQDKLNDIKE--KVKNIHGYMKDIENYIQDGKDDYKKQKETEL 980
Query: 164 NQVLDEI 170
N+V+ ++
Sbjct: 981 NKVIAQL 987
>gi|217272804 hyaluronan-mediated motility receptor isoform d [Homo
sapiens]
Length = 638
Score = 35.0 bits (79), Expect = 0.047
Identities = 37/201 (18%), Positives = 97/201 (48%), Gaps = 22/201 (10%)
Query: 10 VDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACKVLAKQLV-HL 68
+++ +KE+N E+ ++++ + L KQ + L ++ C++L K+ H+
Sbjct: 171 LEENLKEKNDEILSLKQSLEENIVILSKQVEDLNVK------------CQLLEKEKEDHV 218
Query: 69 RKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTL-QTMQN 127
+ + +++++ ++ + K + Q + + + ++ + +L Q + +
Sbjct: 219 NRNREHNENLNAEMQNL--KQKFILEQQEREKLQQKELQIDSLLQQEKELSSSLHQKLCS 276
Query: 128 FQKENMKME-MTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEI-----GIEISGKMAKA 181
FQ+E +K + + EE + TLD++ EE+++ +V Q+ +E +++ + K
Sbjct: 277 FQEEMVKEKNLFEEELKQTLDELDKLQQKEEQAERLVKQLEEEAKSRAEELKLLEEKLKG 336
Query: 182 PSAARSLPSASTSKATISDEE 202
A SA+ ++AT+ +E
Sbjct: 337 KEAELEKSSAAHTQATLLLQE 357
>gi|217272802 hyaluronan-mediated motility receptor isoform a [Homo
sapiens]
Length = 725
Score = 35.0 bits (79), Expect = 0.047
Identities = 37/201 (18%), Positives = 97/201 (48%), Gaps = 22/201 (10%)
Query: 10 VDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACKVLAKQLV-HL 68
+++ +KE+N E+ ++++ + L KQ + L ++ C++L K+ H+
Sbjct: 258 LEENLKEKNDEILSLKQSLEENIVILSKQVEDLNVK------------CQLLEKEKEDHV 305
Query: 69 RKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTL-QTMQN 127
+ + +++++ ++ + K + Q + + + ++ + +L Q + +
Sbjct: 306 NRNREHNENLNAEMQNL--KQKFILEQQEREKLQQKELQIDSLLQQEKELSSSLHQKLCS 363
Query: 128 FQKENMKME-MTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEI-----GIEISGKMAKA 181
FQ+E +K + + EE + TLD++ EE+++ +V Q+ +E +++ + K
Sbjct: 364 FQEEMVKEKNLFEEELKQTLDELDKLQQKEEQAERLVKQLEEEAKSRAEELKLLEEKLKG 423
Query: 182 PSAARSLPSASTSKATISDEE 202
A SA+ ++AT+ +E
Sbjct: 424 KEAELEKSSAAHTQATLLLQE 444
>gi|217416398 hyaluronan-mediated motility receptor isoform c [Homo
sapiens]
Length = 709
Score = 35.0 bits (79), Expect = 0.047
Identities = 37/201 (18%), Positives = 97/201 (48%), Gaps = 22/201 (10%)
Query: 10 VDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACKVLAKQLV-HL 68
+++ +KE+N E+ ++++ + L KQ + L ++ C++L K+ H+
Sbjct: 242 LEENLKEKNDEILSLKQSLEENIVILSKQVEDLNVK------------CQLLEKEKEDHV 289
Query: 69 RKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTL-QTMQN 127
+ + +++++ ++ + K + Q + + + ++ + +L Q + +
Sbjct: 290 NRNREHNENLNAEMQNL--KQKFILEQQEREKLQQKELQIDSLLQQEKELSSSLHQKLCS 347
Query: 128 FQKENMKME-MTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEI-----GIEISGKMAKA 181
FQ+E +K + + EE + TLD++ EE+++ +V Q+ +E +++ + K
Sbjct: 348 FQEEMVKEKNLFEEELKQTLDELDKLQQKEEQAERLVKQLEEEAKSRAEELKLLEEKLKG 407
Query: 182 PSAARSLPSASTSKATISDEE 202
A SA+ ++AT+ +E
Sbjct: 408 KEAELEKSSAAHTQATLLLQE 428
>gi|217416394 hyaluronan-mediated motility receptor isoform b [Homo
sapiens]
Length = 724
Score = 35.0 bits (79), Expect = 0.047
Identities = 37/201 (18%), Positives = 97/201 (48%), Gaps = 22/201 (10%)
Query: 10 VDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACKVLAKQLV-HL 68
+++ +KE+N E+ ++++ + L KQ + L ++ C++L K+ H+
Sbjct: 257 LEENLKEKNDEILSLKQSLEENIVILSKQVEDLNVK------------CQLLEKEKEDHV 304
Query: 69 RKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTL-QTMQN 127
+ + +++++ ++ + K + Q + + + ++ + +L Q + +
Sbjct: 305 NRNREHNENLNAEMQNL--KQKFILEQQEREKLQQKELQIDSLLQQEKELSSSLHQKLCS 362
Query: 128 FQKENMKME-MTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEI-----GIEISGKMAKA 181
FQ+E +K + + EE + TLD++ EE+++ +V Q+ +E +++ + K
Sbjct: 363 FQEEMVKEKNLFEEELKQTLDELDKLQQKEEQAERLVKQLEEEAKSRAEELKLLEEKLKG 422
Query: 182 PSAARSLPSASTSKATISDEE 202
A SA+ ++AT+ +E
Sbjct: 423 KEAELEKSSAAHTQATLLLQE 443
>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
transmembrane signal), 1 [Homo sapiens]
Length = 3259
Score = 35.0 bits (79), Expect = 0.047
Identities = 39/205 (19%), Positives = 84/205 (40%), Gaps = 24/205 (11%)
Query: 10 VDDVIKEQNRELRGTQRAIIRDRAALEKQ----EKQLELEIKKMAKIGNKEACKVL---- 61
V + ++++ +EL G R+ ++ EKQ E+++E +KM K + K+L
Sbjct: 1635 VVEAVRQEKQELYGKLRSTEANKKETEKQLQEAEQEMEEMKEKMRKFAKSKQQKILELEE 1694
Query: 62 AKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDP--- 118
+ A T +S+ + ++ T +K Q++ + D
Sbjct: 1695 ENDRLRAEVHPAGDTAKECMETLLSSNASMKEELERVKMEYETLSKKFQSLMSEKDSLSE 1754
Query: 119 --QKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEISG 176
Q ++ + +E TE+ N T + EE +Q I + ++ + +S
Sbjct: 1755 EVQDLKHQIEGNVSKQANLEATEKHDNQT-------NVTEEGTQSIPGETEEQDSLSMST 1807
Query: 177 KMAKAPSAARSLPSASTSKATISDE 201
+ P+ + S+PSA ++ +S +
Sbjct: 1808 R----PTCSESVPSAKSANPAVSKD 1828
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.121 0.304
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,957,732
Number of Sequences: 37866
Number of extensions: 227306
Number of successful extensions: 1828
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 210
Number of HSP's that attempted gapping in prelim test: 1615
Number of HSP's gapped (non-prelim): 401
length of query: 213
length of database: 18,247,518
effective HSP length: 98
effective length of query: 115
effective length of database: 14,536,650
effective search space: 1671714750
effective search space used: 1671714750
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.