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Search of human proteins with 40217801
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|40217801 hypothetical protein LOC79864 isoform 2 [Homo
sapiens]
(307 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|40217801 hypothetical protein LOC79864 isoform 2 [Homo sapiens] 622 e-178
gi|40217799 hypothetical protein LOC79864 isoform 1 [Homo sapiens] 584 e-167
gi|157738619 smoothelin-like 1 [Homo sapiens] 44 1e-04
gi|192807312 SWI/SNF-related matrix-associated actin-dependent r... 43 4e-04
gi|21071056 SWI/SNF-related matrix-associated actin-dependent re... 43 4e-04
gi|109452597 chromosome 10 open reading frame 46 [Homo sapiens] 39 0.004
gi|192807318 SWI/SNF-related matrix-associated actin-dependent r... 38 0.010
gi|66792814 retrotransposon gag domain containing 4 [Homo sapiens] 38 0.013
gi|192807320 SWI/SNF-related matrix-associated actin-dependent r... 37 0.017
gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens] 37 0.017
gi|209915591 ribosomal protein S6 kinase, 52kDa, polypeptide 1 i... 37 0.029
gi|19923723 ribosomal protein S6 kinase, 52kDa, polypeptide 1 is... 37 0.029
gi|18375650 protein tyrosine phosphatase, non-receptor type 13 i... 36 0.037
gi|18375646 protein tyrosine phosphatase, non-receptor type 13 i... 36 0.037
gi|5453992 protein tyrosine phosphatase, non-receptor type 13 is... 36 0.037
gi|14249338 BUD13 homolog isoform 1 [Homo sapiens] 35 0.064
gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens] 35 0.084
gi|209862772 arg tyrosine kinase isoform d [Homo sapiens] 35 0.11
gi|156071420 hypothetical protein LOC728912 [Homo sapiens] 35 0.11
gi|119709825 neuroblastoma breakpoint family, member 11-like [Ho... 35 0.11
gi|109637753 calpastatin isoform a [Homo sapiens] 34 0.14
gi|109637761 calpastatin isoform g [Homo sapiens] 34 0.19
gi|150378543 MYST histone acetyltransferase (monocytic leukemia)... 33 0.24
gi|150378463 MYST histone acetyltransferase (monocytic leukemia)... 33 0.24
gi|150378493 MYST histone acetyltransferase (monocytic leukemia)... 33 0.24
gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens] 33 0.32
gi|203098098 shroom family member 3 protein [Homo sapiens] 33 0.41
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 33 0.41
gi|237512982 voltage-gated sodium channel type V alpha isoform f... 32 0.54
gi|237512980 voltage-gated sodium channel type V alpha isoform e... 32 0.54
>gi|40217801 hypothetical protein LOC79864 isoform 2 [Homo sapiens]
Length = 307
Score = 622 bits (1603), Expect = e-178
Identities = 307/307 (100%), Positives = 307/307 (100%)
Query: 1 MSKRKLIPKLSIQSPVLHTNLNVQSTHPPLKKEDLHRISKDSLESDSESLTQEIMCHSEF 60
MSKRKLIPKLSIQSPVLHTNLNVQSTHPPLKKEDLHRISKDSLESDSESLTQEIMCHSEF
Sbjct: 1 MSKRKLIPKLSIQSPVLHTNLNVQSTHPPLKKEDLHRISKDSLESDSESLTQEIMCHSEF 60
Query: 61 DDRIRGNGMEPDSLDEEESPRWGSLHEMEEEASGKAAQMAREQNHHTWDQGANNRQQPIE 120
DDRIRGNGMEPDSLDEEESPRWGSLHEMEEEASGKAAQMAREQNHHTWDQGANNRQQPIE
Sbjct: 61 DDRIRGNGMEPDSLDEEESPRWGSLHEMEEEASGKAAQMAREQNHHTWDQGANNRQQPIE 120
Query: 121 DKYSDLRYDPNWKSKKEEGQLLSVEALPESTDSSLENLPLAPLYPSQETSMELSGGKGEQ 180
DKYSDLRYDPNWKSKKEEGQLLSVEALPESTDSSLENLPLAPLYPSQETSMELSGGKGEQ
Sbjct: 121 DKYSDLRYDPNWKSKKEEGQLLSVEALPESTDSSLENLPLAPLYPSQETSMELSGGKGEQ 180
Query: 181 KESPQSAASLLGSEFLSPNYEHGARRSKPFSELSDSDLEEKSSSLSPYVKSSSSHNEVFL 240
KESPQSAASLLGSEFLSPNYEHGARRSKPFSELSDSDLEEKSSSLSPYVKSSSSHNEVFL
Sbjct: 181 KESPQSAASLLGSEFLSPNYEHGARRSKPFSELSDSDLEEKSSSLSPYVKSSSSHNEVFL 240
Query: 241 PGSRGPRRRKSKQHFVEKNKLTLGLPTPKTDSYLQLHNKKRGESHPEQVILRVNSLPRDG 300
PGSRGPRRRKSKQHFVEKNKLTLGLPTPKTDSYLQLHNKKRGESHPEQVILRVNSLPRDG
Sbjct: 241 PGSRGPRRRKSKQHFVEKNKLTLGLPTPKTDSYLQLHNKKRGESHPEQVILRVNSLPRDG 300
Query: 301 FKTFWSQ 307
FKTFWSQ
Sbjct: 301 FKTFWSQ 307
>gi|40217799 hypothetical protein LOC79864 isoform 1 [Homo sapiens]
Length = 778
Score = 584 bits (1505), Expect = e-167
Identities = 288/289 (99%), Positives = 289/289 (100%)
Query: 1 MSKRKLIPKLSIQSPVLHTNLNVQSTHPPLKKEDLHRISKDSLESDSESLTQEIMCHSEF 60
MSKRKLIPKLSIQSPVLHTNLNVQSTHPPLKKEDLHRISKDSLESDSESLTQEIMCHSEF
Sbjct: 1 MSKRKLIPKLSIQSPVLHTNLNVQSTHPPLKKEDLHRISKDSLESDSESLTQEIMCHSEF 60
Query: 61 DDRIRGNGMEPDSLDEEESPRWGSLHEMEEEASGKAAQMAREQNHHTWDQGANNRQQPIE 120
DDRIRGNGMEPDSLDEEESPRWGSLHEMEEEASGKAAQMAREQNHHTWDQGANNRQQPIE
Sbjct: 61 DDRIRGNGMEPDSLDEEESPRWGSLHEMEEEASGKAAQMAREQNHHTWDQGANNRQQPIE 120
Query: 121 DKYSDLRYDPNWKSKKEEGQLLSVEALPESTDSSLENLPLAPLYPSQETSMELSGGKGEQ 180
DKYSDLRYDPNWKSKKEEGQLLSVEALPESTDSSLENLPLAPLYPSQETSMELSGGKGEQ
Sbjct: 121 DKYSDLRYDPNWKSKKEEGQLLSVEALPESTDSSLENLPLAPLYPSQETSMELSGGKGEQ 180
Query: 181 KESPQSAASLLGSEFLSPNYEHGARRSKPFSELSDSDLEEKSSSLSPYVKSSSSHNEVFL 240
KESPQSAASLLGSEFLSPNYEHGARRSKPFSELSDSDLEEKSSSLSPYVKSSSSHNEVFL
Sbjct: 181 KESPQSAASLLGSEFLSPNYEHGARRSKPFSELSDSDLEEKSSSLSPYVKSSSSHNEVFL 240
Query: 241 PGSRGPRRRKSKQHFVEKNKLTLGLPTPKTDSYLQLHNKKRGESHPEQV 289
PGSRGPRRRKSKQHFVEKNKLTLGLPTPKTDSYLQLHNKKRGESHPEQ+
Sbjct: 241 PGSRGPRRRKSKQHFVEKNKLTLGLPTPKTDSYLQLHNKKRGESHPEQI 289
>gi|157738619 smoothelin-like 1 [Homo sapiens]
Length = 512
Score = 44.3 bits (103), Expect = 1e-04
Identities = 58/238 (24%), Positives = 90/238 (37%), Gaps = 22/238 (9%)
Query: 31 KKEDLHRISKDSLESDSESLTQEIMCHSEFDDRIRGNGM---EPDSLDEEESPRWGSLHE 87
K E K+S + + +E E + N EP + EEE + S
Sbjct: 137 KSEPKEAEEKESTLASEKQKAEEKEAKPESGQKADANDRDKPEPKATVEEEDAKTAS--- 193
Query: 88 MEEEASGKAAQMAREQNHHTWDQGANNRQQP--IEDKYSDLRYDPNWKSKKEEGQLLSVE 145
+E +G+ + + E D+ A Q +ED+ +P+ K + + G +
Sbjct: 194 --QEETGQRKECSTEPKEKATDEEAKAESQKAVVEDEAKAEPKEPDGKEEAKHGAKEEAD 251
Query: 146 ALPESTDSSLENLPLAPLYPS-QETSMELSGGKG-------EQKESPQSAASLLGSEFLS 197
A E+ D+ E P +P Q+ E GG G E ESP L ++ L
Sbjct: 252 AKEEAEDAE-EAEPGSPSEEQEQDVEKEPEGGAGVIPSSPEEWPESPTGEGHNLSTDGLG 310
Query: 198 PNYEHGARRSKPFSELSDSDLEEK--SSSLSPYVKSSSSHNEVFLPG-SRGPRRRKSK 252
P+ + S SE S SD+ + S S K + V P RGPR + K
Sbjct: 311 PDCVASGQTSPSASESSPSDVPQSPPESPSSGEKKEKAPERRVSAPARPRGPRAQNRK 368
>gi|192807312 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 42.7 bits (99), Expect = 4e-04
Identities = 59/247 (23%), Positives = 100/247 (40%), Gaps = 41/247 (16%)
Query: 21 LNVQSTHPPLKKEDLHRISKDSLESDSESLTQEIMCHSE-FD-----------DRIRGNG 68
+N PPLK+ED D E++ Q I H E FD + R
Sbjct: 1281 VNPDLEEPPLKEEDE--------VPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPK 1332
Query: 69 MEPDSLDEEESPRWGSLHEMEEEASGKAAQMAREQNHHTWDQGANNRQQPIEDKYSDLRY 128
+P ++E+E P W + E E E+ + +G+ +R+ E YSD
Sbjct: 1333 RKPRLMEEDELPSWIIKDDAEVERL-----TCEEEEEKMFGRGSRHRK---EVDYSDSLT 1384
Query: 129 DPNWKSKKEEGQLLSVEALPESTDSSLENLPLAPLYPSQETSMELSGGKGEQKESPQSAA 188
+ W EEG L +E SS + + S T+ S K ++ + Q
Sbjct: 1385 EKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKK-QKKR 1443
Query: 189 SLLGSEFLSPNYEHGARRSKPFSELSDSDLEEKSSSLSPYVKSSSSHNEVFLPGSRGPRR 248
+E LSPN + ++ K ++ D+ ++ K SS S +EVF+ + P R
Sbjct: 1444 GRPPAEKLSPNPPNLTKKMK---KIVDAVIKYKDSS------SGRQLSEVFI---QLPSR 1491
Query: 249 RKSKQHF 255
++ +++
Sbjct: 1492 KELPEYY 1498
>gi|21071056 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 42.7 bits (99), Expect = 4e-04
Identities = 59/247 (23%), Positives = 100/247 (40%), Gaps = 41/247 (16%)
Query: 21 LNVQSTHPPLKKEDLHRISKDSLESDSESLTQEIMCHSE-FD-----------DRIRGNG 68
+N PPLK+ED D E++ Q I H E FD + R
Sbjct: 1281 VNPDLEEPPLKEEDE--------VPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPK 1332
Query: 69 MEPDSLDEEESPRWGSLHEMEEEASGKAAQMAREQNHHTWDQGANNRQQPIEDKYSDLRY 128
+P ++E+E P W + E E E+ + +G+ +R+ E YSD
Sbjct: 1333 RKPRLMEEDELPSWIIKDDAEVERL-----TCEEEEEKMFGRGSRHRK---EVDYSDSLT 1384
Query: 129 DPNWKSKKEEGQLLSVEALPESTDSSLENLPLAPLYPSQETSMELSGGKGEQKESPQSAA 188
+ W EEG L +E SS + + S T+ S K ++ + Q
Sbjct: 1385 EKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKK-QKKR 1443
Query: 189 SLLGSEFLSPNYEHGARRSKPFSELSDSDLEEKSSSLSPYVKSSSSHNEVFLPGSRGPRR 248
+E LSPN + ++ K ++ D+ ++ K SS S +EVF+ + P R
Sbjct: 1444 GRPPAEKLSPNPPNLTKKMK---KIVDAVIKYKDSS------SGRQLSEVFI---QLPSR 1491
Query: 249 RKSKQHF 255
++ +++
Sbjct: 1492 KELPEYY 1498
>gi|109452597 chromosome 10 open reading frame 46 [Homo sapiens]
Length = 369
Score = 39.3 bits (90), Expect = 0.004
Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Query: 88 MEEEASGKAAQMAREQNHHTWDQGANNRQQPIEDKYSDLRYDPNWKSKKEEGQLLSVEAL 147
MEEE G M +QNH+ W+ + +QP+ P + GQLL+V A+
Sbjct: 5 MEEEEGGSYEAMMDDQNHNNWEAAVDGFRQPLPPPPPPSSI-PAPAREPPGGQLLAVPAV 63
Query: 148 PESTDSSLENLPLAPLYPSQ 167
E LP+ P P +
Sbjct: 64 SVDRKGPKEGLPMGPQPPPE 83
>gi|192807318 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform E [Homo sapiens]
Length = 1614
Score = 38.1 bits (87), Expect = 0.010
Identities = 52/222 (23%), Positives = 91/222 (40%), Gaps = 33/222 (14%)
Query: 46 DSESLTQEIMCHSE-FD-----------DRIRGNGMEPDSLDEEESPRWGSLHEMEEEAS 93
D E++ Q I H E FD + R +P ++E+E P W + E E
Sbjct: 1265 DDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERL 1324
Query: 94 GKAAQMAREQNHHTWDQGANNRQQPIEDKYSDLRYDPNWKSKKEEGQLLSVEALPESTDS 153
E+ + +G+ +R+ E YSD + W EEG L +E S
Sbjct: 1325 -----TCEEEEEKMFGRGSRHRK---EVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKS 1376
Query: 154 SLENLPLAPLYPSQETSMELSGGKGEQKESPQSAASLLGSEFLSPNYEHGARRSKPFSEL 213
S + + S T+ S K ++ + Q +E LSPN + ++ K ++
Sbjct: 1377 SRKRKRDSDAGSSTPTTSTRSRDKDDESKK-QKKRGRPPAEKLSPNPPNLTKKMK---KI 1432
Query: 214 SDSDLEEKSSSLSPYVKSSSSHNEVFLPGSRGPRRRKSKQHF 255
D+ ++ K SS S +EVF+ + P R++ +++
Sbjct: 1433 VDAVIKYKDSS------SGRQLSEVFI---QLPSRKELPEYY 1465
>gi|66792814 retrotransposon gag domain containing 4 [Homo sapiens]
Length = 569
Score = 37.7 bits (86), Expect = 0.013
Identities = 50/212 (23%), Positives = 79/212 (37%), Gaps = 28/212 (13%)
Query: 73 SLDEEESPRWGSLHEMEEEASGKAAQMAREQNHHTWDQGANNR---QQPIEDKYSDLRYD 129
S +EEES E EE S Q AR H+ DQ R Q+ E + +++ +
Sbjct: 332 SPNEEES-------EDEEYYSEDEDQEARRHRLHSKDQRKRMRAFQQEMKEKEEEEMKKE 384
Query: 130 PNWKSKKEEGQLLSVEALPESTDSSLENLPLAPLYPSQETSMELSGGKGEQKESPQSAAS 189
K K+E+ + E + + + N E + GG+ + E Q +
Sbjct: 385 EEMKKKEEKEEEEEEEMKQKEEEEEIRNKNEEEGESKDEEDEDEDGGQKPEGEPQQDPGT 444
Query: 190 LLGSEFLSPNYEHGARRSKPFSELSDSDLEEKSSSLSPYVKSSSS--------HNEVFLP 241
+G +P E D DL+E +V +SS H E FL
Sbjct: 445 ---------EETYGEVEEEPLDEAQDDDLDELMEMEPTFVHASSQTSGPTSGYHAENFL- 494
Query: 242 GSRGPRRRKSKQHFVEKNKLTLGLPTPKTDSY 273
G+ P + S++ + L GLP + Y
Sbjct: 495 GASPPIIQPSRRRNQNRVPLLEGLPGTNSPFY 526
>gi|192807320 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform F [Homo sapiens]
Length = 1613
Score = 37.4 bits (85), Expect = 0.017
Identities = 46/191 (24%), Positives = 77/191 (40%), Gaps = 24/191 (12%)
Query: 46 DSESLTQEIMCHSE-FD-----------DRIRGNGMEPDSLDEEESPRWGSLHEMEEEAS 93
D E++ Q I H E FD + R +P ++E+E P W + E E
Sbjct: 1265 DDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERL 1324
Query: 94 GKAAQMAREQNHHTWDQGANNRQQPIEDKYSDLRYDPNWKSKKEEGQLLSVEALPESTDS 153
E+ + +G+ +R+ E YSD + W EEG L +E S
Sbjct: 1325 -----TCEEEEEKMFGRGSRHRK---EVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKS 1376
Query: 154 SLENLPLAPLYPSQETSMELSGGKGEQKESPQSAASLLGSEFLSPNYEHGARRSKPFSEL 213
S + + S T+ S K ++ + Q +E LSPN + ++ K ++
Sbjct: 1377 SRKRKRDSDAGSSTPTTSTRSRDKDDESKK-QKKRGRPPAEKLSPNPPNLTKKMK---KI 1432
Query: 214 SDSDLEEKSSS 224
D+ ++ K SS
Sbjct: 1433 VDAVIKYKDSS 1443
>gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens]
Length = 727
Score = 37.4 bits (85), Expect = 0.017
Identities = 56/240 (23%), Positives = 92/240 (38%), Gaps = 39/240 (16%)
Query: 30 LKKEDLHRISKDSLESDSESLTQEIMCHSEFDDRIRGNGMEPDSLDEEESPRWGSLHEME 89
++K D R +K SE + E+ DR R + S +E S +GS HE
Sbjct: 135 VRKRDPERRAKSPTPDGSERIGLEV-------DR-RASRSSQSSKEEVNSEEYGSDHETG 186
Query: 90 EEASGKAAQMAREQNHHTWDQGANNRQQPIEDKYSDLRYDPNWKSKKEEGQLLSVEALPE 149
S D+ NN + E D+ D + EE + + + E
Sbjct: 187 SSGSS--------------DEQGNNTENEEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEE 232
Query: 150 STDSSLENLPLAPLYPSQETSMELSGGKGEQKE-----SPQSAASLLGSEFLSPNYEHGA 204
+ E +E E + +QKE +S AS GSE S ++ G+
Sbjct: 233 EEEEEEEE------EEEEEEEEEYEQDERDQKEEGNDYDTRSEASDSGSE--SVSFTDGS 284
Query: 205 RRSKPFSELSDSDLEE--KSSSLSPYV--KSSSSHNEVFLPGSRGPRRRKSKQHFVEKNK 260
RS ++ SD +E ++ +SP V +S SS +E + + + S V K++
Sbjct: 285 VRSGSGTDGSDEKKKERKRARGISPIVFDRSGSSASESYAGSEKKHEKLSSSVRAVRKDQ 344
>gi|209915591 ribosomal protein S6 kinase, 52kDa, polypeptide 1
isoform b [Homo sapiens]
Length = 1054
Score = 36.6 bits (83), Expect = 0.029
Identities = 47/199 (23%), Positives = 77/199 (38%), Gaps = 16/199 (8%)
Query: 39 SKDSLESDSESLTQEIMCHSEFDDRIRGNGMEPDSLDEEESPRW-GSLHEMEEEASGKAA 97
S +S SD S+ + + S + + + D ++ SP+W S EEE +
Sbjct: 443 SFESRGSDGGSMLKALPLKSSLTPSSQDDSNQEDD-GQDSSPKWPDSGSSSEEECTTSYL 501
Query: 98 QMAREQNHHTWDQGANNRQQPIEDKYSDLRYDPNWKSKKEEGQLLSVEALPESTDSSLEN 157
+ E + G+ N + ++ + + + + K+ K L+ ++ ST
Sbjct: 502 TLCNEYGQEKIEPGSLNEEPFMKTEGNGV----DTKAIKSFPAHLAADSDSPSTQLRAHE 557
Query: 158 LPLAP-----LYPSQETSMELSGGKGEQKE-----SPQSAASLLGSEFLSPNYEHGARRS 207
L P S TS LS K E S SA+ LLG +F Y +
Sbjct: 558 LKFFPNDDPEAVSSPRTSDSLSRSKNSPMEFFRIDSKDSASELLGLDFGEKLYSLKSEPL 617
Query: 208 KPFSELSDSDLEEKSSSLS 226
KPF L D D +S + S
Sbjct: 618 KPFFTLPDGDSASRSFNTS 636
>gi|19923723 ribosomal protein S6 kinase, 52kDa, polypeptide 1
isoform a [Homo sapiens]
Length = 1066
Score = 36.6 bits (83), Expect = 0.029
Identities = 47/199 (23%), Positives = 77/199 (38%), Gaps = 16/199 (8%)
Query: 39 SKDSLESDSESLTQEIMCHSEFDDRIRGNGMEPDSLDEEESPRW-GSLHEMEEEASGKAA 97
S +S SD S+ + + S + + + D ++ SP+W S EEE +
Sbjct: 455 SFESRGSDGGSMLKALPLKSSLTPSSQDDSNQEDD-GQDSSPKWPDSGSSSEEECTTSYL 513
Query: 98 QMAREQNHHTWDQGANNRQQPIEDKYSDLRYDPNWKSKKEEGQLLSVEALPESTDSSLEN 157
+ E + G+ N + ++ + + + + K+ K L+ ++ ST
Sbjct: 514 TLCNEYGQEKIEPGSLNEEPFMKTEGNGV----DTKAIKSFPAHLAADSDSPSTQLRAHE 569
Query: 158 LPLAP-----LYPSQETSMELSGGKGEQKE-----SPQSAASLLGSEFLSPNYEHGARRS 207
L P S TS LS K E S SA+ LLG +F Y +
Sbjct: 570 LKFFPNDDPEAVSSPRTSDSLSRSKNSPMEFFRIDSKDSASELLGLDFGEKLYSLKSEPL 629
Query: 208 KPFSELSDSDLEEKSSSLS 226
KPF L D D +S + S
Sbjct: 630 KPFFTLPDGDSASRSFNTS 648
>gi|18375650 protein tyrosine phosphatase, non-receptor type 13
isoform 4 [Homo sapiens]
Length = 2490
Score = 36.2 bits (82), Expect = 0.037
Identities = 35/123 (28%), Positives = 50/123 (40%), Gaps = 27/123 (21%)
Query: 128 YDPNWKSKKEEGQLLSVEALPESTDSSLENLPLAPLYPSQETSMELSGGKGEQKESPQSA 187
Y P S KE+ S E P S +L A LYP ++ + + PQ+
Sbjct: 943 YQPLQNSSKEKNDKASWEEKPREMSKSYHDLSQASLYPHRKNVIV------NMEPPPQTV 996
Query: 188 ASLLGSEFLSPNYEHGARRSKPFSELSDSDLEEKSSSLSPYVKSSSSHNEVFLPGSRGPR 247
A L+G KP ++S SD E SL+ K ++S + L +R P
Sbjct: 997 AELVG---------------KPSHQMSRSDAE----SLAGVTKLNNSKSVASL--NRSPE 1035
Query: 248 RRK 250
RRK
Sbjct: 1036 RRK 1038
>gi|18375646 protein tyrosine phosphatase, non-receptor type 13
isoform 1 [Homo sapiens]
Length = 2485
Score = 36.2 bits (82), Expect = 0.037
Identities = 35/123 (28%), Positives = 50/123 (40%), Gaps = 27/123 (21%)
Query: 128 YDPNWKSKKEEGQLLSVEALPESTDSSLENLPLAPLYPSQETSMELSGGKGEQKESPQSA 187
Y P S KE+ S E P S +L A LYP ++ + + PQ+
Sbjct: 943 YQPLQNSSKEKNDKASWEEKPREMSKSYHDLSQASLYPHRKNVIV------NMEPPPQTV 996
Query: 188 ASLLGSEFLSPNYEHGARRSKPFSELSDSDLEEKSSSLSPYVKSSSSHNEVFLPGSRGPR 247
A L+G KP ++S SD E SL+ K ++S + L +R P
Sbjct: 997 AELVG---------------KPSHQMSRSDAE----SLAGVTKLNNSKSVASL--NRSPE 1035
Query: 248 RRK 250
RRK
Sbjct: 1036 RRK 1038
>gi|5453992 protein tyrosine phosphatase, non-receptor type 13 isoform
2 [Homo sapiens]
Length = 2466
Score = 36.2 bits (82), Expect = 0.037
Identities = 35/123 (28%), Positives = 50/123 (40%), Gaps = 27/123 (21%)
Query: 128 YDPNWKSKKEEGQLLSVEALPESTDSSLENLPLAPLYPSQETSMELSGGKGEQKESPQSA 187
Y P S KE+ S E P S +L A LYP ++ + + PQ+
Sbjct: 943 YQPLQNSSKEKNDKASWEEKPREMSKSYHDLSQASLYPHRKNVIV------NMEPPPQTV 996
Query: 188 ASLLGSEFLSPNYEHGARRSKPFSELSDSDLEEKSSSLSPYVKSSSSHNEVFLPGSRGPR 247
A L+G KP ++S SD E SL+ K ++S + L +R P
Sbjct: 997 AELVG---------------KPSHQMSRSDAE----SLAGVTKLNNSKSVASL--NRSPE 1035
Query: 248 RRK 250
RRK
Sbjct: 1036 RRK 1038
>gi|14249338 BUD13 homolog isoform 1 [Homo sapiens]
Length = 619
Score = 35.4 bits (80), Expect = 0.064
Identities = 37/149 (24%), Positives = 61/149 (40%), Gaps = 27/149 (18%)
Query: 161 APLYPSQETSMELSGGKGEQKESPQSAASLLGSEF-------------LSPNYEHGARRS 207
+P ++ S ++S + SP ++ LGS L+PN + R+
Sbjct: 226 SPPRRARHGSSDISSPRRVHNNSPDTSRRTLGSSDTQQLRRARHDSPDLAPNVTYSLPRT 285
Query: 208 KPFSELSDSDLEEKSSSLSPYVKSSSSHNEVFLPGSR--------GPRRRKSKQHFVEKN 259
K S E SS SP+ K S + + F S+ PR++++K HF +K
Sbjct: 286 K-----SGKAPERASSKTSPHWKESGASHLSFPKNSKYEYDPDISPPRKKQAKSHFGDKK 340
Query: 260 KL-TLGLPTPKTDSYLQLHNKKRGESHPE 287
+L + G TDS L K+ H +
Sbjct: 341 QLDSKGDCQKATDSDLSSPRHKQSPGHQD 369
>gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens]
Length = 709
Score = 35.0 bits (79), Expect = 0.084
Identities = 53/219 (24%), Positives = 85/219 (38%), Gaps = 39/219 (17%)
Query: 30 LKKEDLHRISKDSLESDSESLTQEIMCHSEFDDRIRGNGMEPDSLDEEESPRWGSLHEME 89
++K D R +K SE + E+ DR R + S +E S +GS HE
Sbjct: 135 VRKRDPERRAKSPTPDGSERIGLEV-------DR-RASRSSQSSKEEVNSEEYGSDHETG 186
Query: 90 EEASGKAAQMAREQNHHTWDQGANNRQQPIEDKYSDLRYDPNWKSKKEEGQLLSVEALPE 149
S D+ NN + E D+ D + EE + + + E
Sbjct: 187 SSGSS--------------DEQGNNTENEEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEE 232
Query: 150 STDSSLENLPLAPLYPSQETSMELSGGKGEQKE-----SPQSAASLLGSEFLSPNYEHGA 204
+ E +E E + +QKE +S AS GSE S ++ G+
Sbjct: 233 EEEEEEEE------EEEEEEEEEYEQDERDQKEEGNDYDTRSEASDSGSE--SVSFTDGS 284
Query: 205 RRSKPFSELSDSDLEE--KSSSLSPYV--KSSSSHNEVF 239
RS ++ SD +E ++ +SP V +S SS +E +
Sbjct: 285 VRSGSGTDGSDEKKKERKRARGISPIVFDRSGSSASESY 323
>gi|209862772 arg tyrosine kinase isoform d [Homo sapiens]
Length = 1064
Score = 34.7 bits (78), Expect = 0.11
Identities = 38/170 (22%), Positives = 65/170 (38%), Gaps = 24/170 (14%)
Query: 150 STDSSLENLPLAPLYPSQETSMELSGGKGEQKESPQSAASLLGSEFLSPNYEHGARRSK- 208
S+ S + LP P+ PS+ +++ E E Q A S L+P + GA+ S
Sbjct: 546 SSSSVVPYLPRLPILPSKTRTLKKQVENKENIEGAQDATENSASS-LAPGFIRGAQASSG 604
Query: 209 ------------PFSELSDSD-----LEEKSSSLSPYVKSSSS-----HNEVFLPGSRGP 246
P S L D+ + K S ++K ++ + F P
Sbjct: 605 SPALPRKQRDKSPSSLLEDAKETCFTRDRKGGFFSSFMKKRNAPTPPKRSSSFREMENQP 664
Query: 247 RRRKSKQHFVEKNKLTLGLPTPKTDSYLQLHNKKRGESHPEQVILRVNSL 296
++ E++++ + LP S LQL S PE+ + R N +
Sbjct: 665 HKKYELTGLPEQDRMAMTLPRNCQRSKLQLERTVSTSSQPEENVDRANDM 714
>gi|156071420 hypothetical protein LOC728912 [Homo sapiens]
Length = 790
Score = 34.7 bits (78), Expect = 0.11
Identities = 39/151 (25%), Positives = 65/151 (43%), Gaps = 24/151 (15%)
Query: 2 SKRKLIPKLSIQSPVLHTNLNVQSTHPPLKKEDLHRISKDSLESDS-ESLTQEIMCHSEF 60
++ K +P+ S++ + ++H P HR +K + E D +S H E+
Sbjct: 390 AEEKEVPEDSLEECAI----TCSNSHGPYDSNQPHRKTKITFEEDKVDSTLIGSSSHVEW 445
Query: 61 DDRIRGNGMEPDSLDEEE------SPRWGSLHEMEEEASGKAAQMAREQNHHTWDQGANN 114
+D + E +S DEEE SPR +L E EEE E +WD+G +
Sbjct: 446 EDAVHIIP-ENESDDEEEEEKGPVSPR--NLQESEEE----------EVPQESWDEGYST 492
Query: 115 RQQPIEDKYSDLRYDPNWKSKKEEGQLLSVE 145
P E S Y + S +E+ ++V+
Sbjct: 493 LSIPPERLASYQSYSSTFHSLEEQQVCMAVD 523
>gi|119709825 neuroblastoma breakpoint family, member 11-like [Homo
sapiens]
Length = 790
Score = 34.7 bits (78), Expect = 0.11
Identities = 39/151 (25%), Positives = 65/151 (43%), Gaps = 24/151 (15%)
Query: 2 SKRKLIPKLSIQSPVLHTNLNVQSTHPPLKKEDLHRISKDSLESDS-ESLTQEIMCHSEF 60
++ K +P+ S++ + ++H P HR +K + E D +S H E+
Sbjct: 390 AEEKEVPEDSLEECAI----TCSNSHGPYDSNQPHRKTKITFEEDKVDSTLIGSSSHVEW 445
Query: 61 DDRIRGNGMEPDSLDEEE------SPRWGSLHEMEEEASGKAAQMAREQNHHTWDQGANN 114
+D + E +S DEEE SPR +L E EEE E +WD+G +
Sbjct: 446 EDAVHIIP-ENESDDEEEEEKGPVSPR--NLQESEEE----------EVPQESWDEGYST 492
Query: 115 RQQPIEDKYSDLRYDPNWKSKKEEGQLLSVE 145
P E S Y + S +E+ ++V+
Sbjct: 493 LSIPPERLASYQSYSSTFHSLEEQQVCMAVD 523
>gi|109637753 calpastatin isoform a [Homo sapiens]
Length = 791
Score = 34.3 bits (77), Expect = 0.14
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 12/138 (8%)
Query: 168 ETSMELSGGKGEQKESPQSAASLLGSEFLSPNYEHGARRSKPFSELSDSDLEEKSSSLSP 227
E + E GE+K S + A+ LGS S Y G + S + S KSSS++P
Sbjct: 29 EKTSESPSKPGEKKGSDEKKAASLGSSQSSRTYAGGTASATKVS--ASSGATSKSSSMNP 86
Query: 228 YVKSSSSHNEVFLPGSRGPRRRKSKQHFVEKNKLTLGLPTPKTDS--YLQLHNKKRGESH 285
++ + + G P ++K K+ V+ P K+ S +H KK E
Sbjct: 87 -TETKAIPVSQQMEGPHLPNKKKHKKQAVKTE------PEKKSQSTKLSVVHEKKSQEGK 139
Query: 286 PEQVILRVNSLPRDGFKT 303
P++ SLP+ T
Sbjct: 140 PKE-HTEPKSLPKQASDT 156
>gi|109637761 calpastatin isoform g [Homo sapiens]
Length = 772
Score = 33.9 bits (76), Expect = 0.19
Identities = 37/143 (25%), Positives = 56/143 (39%), Gaps = 13/143 (9%)
Query: 168 ETSMELSGGKGEQKESPQSAASLLGSEFLSPNYEHGARRSKPFSELSDSDLEEKSSSLSP 227
E + E GE+K S + A+ LGS S Y G + S + S KSSS++P
Sbjct: 29 EKTSESPSKPGEKKGSDEKKAASLGSSQSSRTYAGGTASATKVS--ASSGATSKSSSMNP 86
Query: 228 ----YVKSSSSHNEVFLPGSRGPRRRKSKQHFVEKNKLTLGLPTPKTDSYL---QLHNKK 280
+ S LP + +++ K +K++ T PK S HNKK
Sbjct: 87 TETKAIPVSQQMEGPHLPNKKKHKKQAVKTEPEKKSQSTKPKSLPKQASDTGSNDAHNKK 146
Query: 281 ----RGESHPEQVILRVNSLPRD 299
E P + + P+D
Sbjct: 147 AVSRSAEQQPSEKSTEPKTKPQD 169
>gi|150378543 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 33.5 bits (75), Expect = 0.24
Identities = 49/247 (19%), Positives = 88/247 (35%), Gaps = 35/247 (14%)
Query: 70 EPDSLDEEESPRWGSLHEMEEEASGKAAQMAREQNHHTWDQGANNRQQPIED-------- 121
EP+ +EEE PR EE + + E+ + A N +D
Sbjct: 1267 EPEVEEEEEKPRVSEEQRQSEEEQQELEEPEPEEEEDAAAETAQNDDHDADDEDDGHLES 1326
Query: 122 -KYSDLRYDPNWKSKKEE----------GQLLSVEALPESTDSSLENLPLAPLYPSQETS 170
K +L P + KEE S E + + ++ L++ P + + S
Sbjct: 1327 TKKKELEEQPTREDVKEEPGVQESFLDANMQKSREKIKDKEETELDSEEEQPSHDTSVVS 1386
Query: 171 MELSGGKGEQKESPQSAASLLGSEFLSPNYEHGARRSKPFSELSDSDLEEKSSSLSPYVK 230
+++G + + +E + L+ E P SEL DLE + S +
Sbjct: 1387 EQMAGSEDDHEEDSHTKEELI---------ELKEEEEIPHSEL---DLETVQAVQSLTQE 1434
Query: 231 SSSSHNEVFLPGSRGPRRRKSKQHFVEKNKLTLGLPTPKTDSYLQLHNK--KRGESHPEQ 288
SS H + ++ Q + + ++ + D + HN +SHP Q
Sbjct: 1435 ESSEHEGAYQDCEETLAACQTLQSYTQADEDP--QMSMVEDCHASEHNSPISSVQSHPSQ 1492
Query: 289 VILRVNS 295
+ V+S
Sbjct: 1493 SVRSVSS 1499
>gi|150378463 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 33.5 bits (75), Expect = 0.24
Identities = 49/247 (19%), Positives = 88/247 (35%), Gaps = 35/247 (14%)
Query: 70 EPDSLDEEESPRWGSLHEMEEEASGKAAQMAREQNHHTWDQGANNRQQPIED-------- 121
EP+ +EEE PR EE + + E+ + A N +D
Sbjct: 1267 EPEVEEEEEKPRVSEEQRQSEEEQQELEEPEPEEEEDAAAETAQNDDHDADDEDDGHLES 1326
Query: 122 -KYSDLRYDPNWKSKKEE----------GQLLSVEALPESTDSSLENLPLAPLYPSQETS 170
K +L P + KEE S E + + ++ L++ P + + S
Sbjct: 1327 TKKKELEEQPTREDVKEEPGVQESFLDANMQKSREKIKDKEETELDSEEEQPSHDTSVVS 1386
Query: 171 MELSGGKGEQKESPQSAASLLGSEFLSPNYEHGARRSKPFSELSDSDLEEKSSSLSPYVK 230
+++G + + +E + L+ E P SEL DLE + S +
Sbjct: 1387 EQMAGSEDDHEEDSHTKEELI---------ELKEEEEIPHSEL---DLETVQAVQSLTQE 1434
Query: 231 SSSSHNEVFLPGSRGPRRRKSKQHFVEKNKLTLGLPTPKTDSYLQLHNK--KRGESHPEQ 288
SS H + ++ Q + + ++ + D + HN +SHP Q
Sbjct: 1435 ESSEHEGAYQDCEETLAACQTLQSYTQADEDP--QMSMVEDCHASEHNSPISSVQSHPSQ 1492
Query: 289 VILRVNS 295
+ V+S
Sbjct: 1493 SVRSVSS 1499
>gi|150378493 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 33.5 bits (75), Expect = 0.24
Identities = 49/247 (19%), Positives = 88/247 (35%), Gaps = 35/247 (14%)
Query: 70 EPDSLDEEESPRWGSLHEMEEEASGKAAQMAREQNHHTWDQGANNRQQPIED-------- 121
EP+ +EEE PR EE + + E+ + A N +D
Sbjct: 1267 EPEVEEEEEKPRVSEEQRQSEEEQQELEEPEPEEEEDAAAETAQNDDHDADDEDDGHLES 1326
Query: 122 -KYSDLRYDPNWKSKKEE----------GQLLSVEALPESTDSSLENLPLAPLYPSQETS 170
K +L P + KEE S E + + ++ L++ P + + S
Sbjct: 1327 TKKKELEEQPTREDVKEEPGVQESFLDANMQKSREKIKDKEETELDSEEEQPSHDTSVVS 1386
Query: 171 MELSGGKGEQKESPQSAASLLGSEFLSPNYEHGARRSKPFSELSDSDLEEKSSSLSPYVK 230
+++G + + +E + L+ E P SEL DLE + S +
Sbjct: 1387 EQMAGSEDDHEEDSHTKEELI---------ELKEEEEIPHSEL---DLETVQAVQSLTQE 1434
Query: 231 SSSSHNEVFLPGSRGPRRRKSKQHFVEKNKLTLGLPTPKTDSYLQLHNK--KRGESHPEQ 288
SS H + ++ Q + + ++ + D + HN +SHP Q
Sbjct: 1435 ESSEHEGAYQDCEETLAACQTLQSYTQADEDP--QMSMVEDCHASEHNSPISSVQSHPSQ 1492
Query: 289 VILRVNS 295
+ V+S
Sbjct: 1493 SVRSVSS 1499
>gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens]
Length = 330
Score = 33.1 bits (74), Expect = 0.32
Identities = 46/223 (20%), Positives = 84/223 (37%), Gaps = 23/223 (10%)
Query: 31 KKEDLHRISKDSLESDSESLTQEIMCHSEFD---DRIRGNGMEPDSLDEEESPRWGSLHE 87
++E++ I ++ ESD E + EF + RG + P S+ +E
Sbjct: 108 ERENVEYIERE--ESDGE--------YDEFGRKKKKYRGKAVGPASILKEVE-------- 149
Query: 88 MEEEASGKAAQMAREQNHHTWDQGANNRQQPIEDKYSDLRYDPNWKSKKEEGQLLSVEAL 147
++E+ G+ + + + D+ + + D + + KK + S
Sbjct: 150 -DKESEGEEEDEDEDLSKYKLDEDEDEDDADLSKYNLDASEEEDSNKKKSNRRSRSKSRS 208
Query: 148 PESTDSSLENLPLAPLYPSQETSMELSGGKGEQKESPQSAASLLGSEFLSPNYEH-GARR 206
S SS + P + S+ S S + + S + + GS+ S + H G+
Sbjct: 209 SHSRSSSRSSSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRGSKSRSSSRSHRGSSS 268
Query: 207 SKPFSELSDSDLEEKSSSLSPYVKSSSSHNEVFLPGSRGPRRR 249
+ S S S E++ S SSS + SR P RR
Sbjct: 269 PRKRSYSSSSSSPERNRKRSRSRSSSSGDRKKRRTRSRSPERR 311
Score = 30.0 bits (66), Expect = 2.7
Identities = 56/222 (25%), Positives = 84/222 (37%), Gaps = 41/222 (18%)
Query: 76 EEESPRWGSLHEME-------EEASGKAAQMAREQNHHTWDQ-GANNRQQPIEDKYSDLR 127
EE + G +E E EE+ G+ + R++ + G + + +EDK S+
Sbjct: 97 EERTGYGGGFNERENVEYIEREESDGEYDEFGRKKKKYRGKAVGPASILKEVEDKESE-- 154
Query: 128 YDPNWKSKKEEGQLLSVEALPESTDSSLENLPLAPLYPSQETSMELSGGKGEQKESPQSA 187
+++E + LS L E D +L L S+E E S K + S
Sbjct: 155 -----GEEEDEDEDLSKYKLDEDEDEDDADLSKYNLDASEE---EDSNKKKSNRRSR--- 203
Query: 188 ASLLGSEFLSPNYEHGARRSKPFSELSDSDLEEKSSSLSPYVKSSSSHNEVFLPGSRGPR 247
S+ S + +R S P S S S +SSS S SSS GS+
Sbjct: 204 -----SKSRSSHSRSSSRSSSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRGSKS-- 256
Query: 248 RRKSKQHFVEKNKLTLGLPTPKTDSYLQL-----HNKKRGES 284
R S+ H G +P+ SY N+KR S
Sbjct: 257 RSSSRSH--------RGSSSPRKRSYSSSSSSPERNRKRSRS 290
>gi|203098098 shroom family member 3 protein [Homo sapiens]
Length = 1996
Score = 32.7 bits (73), Expect = 0.41
Identities = 28/98 (28%), Positives = 40/98 (40%), Gaps = 7/98 (7%)
Query: 148 PESTDSSLENLPL---APLYPSQETSMELSGGKGEQKESPQSAASLLGSEFLSPNYEHGA 204
P S +++ +NLP APL P++ S +E P S +SL P
Sbjct: 366 PSSLETATDNLPPKVGAPLPPARSDSYAAF----RHRERPSSWSSLDQKRLCRPQANSLG 421
Query: 205 RRSKPFSELSDSDLEEKSSSLSPYVKSSSSHNEVFLPG 242
PF E + EKS SP VK ++ + PG
Sbjct: 422 SLKSPFIEEQLHTVLEKSPENSPPVKPKHNYTQKAQPG 459
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 32.7 bits (73), Expect = 0.41
Identities = 31/129 (24%), Positives = 49/129 (37%), Gaps = 23/129 (17%)
Query: 24 QSTHPPLKKEDLHRISKDSLESDSESL---TQEIMCHSEFDDRIRGNGM----------- 69
+ T PP++ E+ E D+E E M E +++ GN +
Sbjct: 484 EETPPPVEPEE---------EEDTEDAGLDDWEAMASDEETEKVEGNKVHIEVKENPEEE 534
Query: 70 EPDSLDEEESPRWGSLHEMEEEASGKAAQMAREQNHHTWDQGANNRQQPIEDKYSDLRYD 129
E + +EEE E E E+ G E+ D G ++P ++ SD YD
Sbjct: 535 EEEEEEEEEDEESEEEEEEEGESEGSEGDEEDEKVSDEKDSGKTLDKKPSKEMSSDSEYD 594
Query: 130 PNWKSKKEE 138
+ KEE
Sbjct: 595 SDDDRTKEE 603
>gi|237512982 voltage-gated sodium channel type V alpha isoform f
[Homo sapiens]
Length = 1962
Score = 32.3 bits (72), Expect = 0.54
Identities = 46/190 (24%), Positives = 75/190 (39%), Gaps = 41/190 (21%)
Query: 114 NRQQPIEDKYSDLRYDPNWKSKKEEGQLLSVEALPESTDSSLENLPLAPLYPSQETS--- 170
N+ E + + R+ + K+E + L++ + + SSLE PLAP+ + S
Sbjct: 420 NQATIAETEEKEKRFQEAMEMLKKEHEALTIRGVDTVSRSSLEMSPLAPVNSHERRSKRR 479
Query: 171 MELSGG----------KGEQKESPQSAASL-----LGSEFLSPNYEHGA----RRSKPFS 211
+S G K + ++ P++ L L + P G+ RR S
Sbjct: 480 KRMSSGTEECGEDRLPKSDSEDGPRAMNHLSLTRGLSRTSMKPRSSRGSIFTFRRRDLGS 539
Query: 212 ELSDSDLEEKSSSLSPYVKSSSSHNEVFLPGSRGPRRRKSKQHFVEKNKLTLGLPTPKTD 271
E +D E ++ +S S H + +P P RR S Q G P+P T
Sbjct: 540 EADFADDENSTAG-----ESESHHTSLLVP---WPLRRTSAQ----------GQPSPGTS 581
Query: 272 S-YLQLHNKK 280
+ LH KK
Sbjct: 582 APGHALHGKK 591
>gi|237512980 voltage-gated sodium channel type V alpha isoform e
[Homo sapiens]
Length = 1983
Score = 32.3 bits (72), Expect = 0.54
Identities = 46/190 (24%), Positives = 75/190 (39%), Gaps = 41/190 (21%)
Query: 114 NRQQPIEDKYSDLRYDPNWKSKKEEGQLLSVEALPESTDSSLENLPLAPLYPSQETS--- 170
N+ E + + R+ + K+E + L++ + + SSLE PLAP+ + S
Sbjct: 420 NQATIAETEEKEKRFQEAMEMLKKEHEALTIRGVDTVSRSSLEMSPLAPVNSHERRSKRR 479
Query: 171 MELSGG----------KGEQKESPQSAASL-----LGSEFLSPNYEHGA----RRSKPFS 211
+S G K + ++ P++ L L + P G+ RR S
Sbjct: 480 KRMSSGTEECGEDRLPKSDSEDGPRAMNHLSLTRGLSRTSMKPRSSRGSIFTFRRRDLGS 539
Query: 212 ELSDSDLEEKSSSLSPYVKSSSSHNEVFLPGSRGPRRRKSKQHFVEKNKLTLGLPTPKTD 271
E +D E ++ +S S H + +P P RR S Q G P+P T
Sbjct: 540 EADFADDENSTAG-----ESESHHTSLLVP---WPLRRTSAQ----------GQPSPGTS 581
Query: 272 S-YLQLHNKK 280
+ LH KK
Sbjct: 582 APGHALHGKK 591
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.306 0.125 0.355
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,288,078
Number of Sequences: 37866
Number of extensions: 655315
Number of successful extensions: 2402
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 152
Number of HSP's that attempted gapping in prelim test: 2311
Number of HSP's gapped (non-prelim): 225
length of query: 307
length of database: 18,247,518
effective HSP length: 102
effective length of query: 205
effective length of database: 14,385,186
effective search space: 2948963130
effective search space used: 2948963130
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.