Guide to the Human Genome
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Name: ABHD15 Sequence: fasta or formatted (468aa) NCBI GI: 39930569
Description:

abhydrolase domain containing 15

Referenced in:

Additional Enzymes and Related Sequences

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.0         42           2
 C cysteine            3.2         15           1
 D aspartate           4.5         21           2
 E glutamate           6.4         30           2
 F phenylalanine       4.7         22           2
 G glycine             9.4         44           3
 H histidine           3.0         14           2
 I isoleucine          2.6         12           1
 K lysine              1.3          6           1
 L leucine            14.1         66           3
 M methionine          0.2          1           1
 N asparagine          1.3          6           1
 P proline             7.7         36           2
 Q glutamine           1.9          9           1
 R arginine            9.8         46           3
 S serine              7.5         35           4
 T threonine           3.4         16           2
 V valine              5.3         25           2
 W tryptophan          2.4         11           1
 Y tyrosine            2.4         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   abhydrolase domain containing 15 
ABHD3                 0.091   alpha/beta hydrolase domain containing protein 3 [Ho...
ABHD1                 0.081   abhydrolase domain-containing protein 1 
ABHD2                 0.044   alpha/beta hydrolase domain containing protein 2 [Ho...
ABHD2                 0.044   alpha/beta hydrolase domain containing protein 2 [Ho...
LOC643669             0.007   PREDICTED: similar to mCG2980 
LOC643669             0.007   PREDICTED: similar to mCG2980 isoform 1 
LOC643669             0.007   PREDICTED: similar to mCG2980 isoform 1 
SLC6A5                0.007   solute carrier family 6 (neurotransmitter transporte...
COL5A3                0.007   collagen, type V, alpha 3 preproprotein 
MAMDC4                0.007   apical early endosomal glycoprotein precursor [Homo...
LOC100293795          0.006   PREDICTED: hypothetical protein 
LOC100287397          0.006   PREDICTED: hypothetical protein 
LOC100287397          0.006   PREDICTED: hypothetical protein XP_002343164 
ADAMTS5               0.006   ADAM metallopeptidase with thrombospondin type 1 mo...
LOC100293902          0.005   PREDICTED: similar to hCG1986016 
IRS2                  0.005   insulin receptor substrate 2 
COL4A4                0.005   alpha 4 type IV collagen precursor 
FAM108A1              0.005   hypothetical protein LOC81926 isoform 1 
LOC100290409          0.004   PREDICTED: hypothetical protein XP_002347745 
LOC100288822          0.004   PREDICTED: hypothetical protein XP_002343515 
COL7A1                0.004   alpha 1 type VII collagen precursor 
IL17RC                0.004   interleukin 17 receptor C isoform 1 precursor 
IL17RC                0.004   interleukin 17 receptor C isoform 3 precursor 
IL17RC                0.004   interleukin 17 receptor C isoform 2 precursor 
BRI3BP                0.004   BRI3-binding protein 
UNQ830                0.004   hypothetical protein LOC389084 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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