Guide to the Human Genome
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Name: ABHD1 Sequence: fasta or formatted (405aa) NCBI GI: 194578891
Description:

abhydrolase domain-containing protein 1

Referenced in:

Additional Enzymes and Related Sequences

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.1         37           2
 C cysteine            2.2          9           1
 D aspartate           4.9         20           2
 E glutamate           4.0         16           2
 F phenylalanine       4.4         18           1
 G glycine             5.4         22           2
 H histidine           2.5         10           1
 I isoleucine          4.4         18           1
 K lysine              1.7          7           1
 L leucine            14.8         60           3
 M methionine          0.5          2           1
 N asparagine          2.7         11           2
 P proline             6.4         26           1
 Q glutamine           7.2         29           1
 R arginine            5.4         22           1
 S serine              6.4         26           2
 T threonine           5.9         24           2
 V valine              6.2         25           2
 W tryptophan          1.7          7           1
 Y tyrosine            4.0         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   abhydrolase domain-containing protein 1 
ABHD3                 0.419   alpha/beta hydrolase domain containing protein 3 [Ho...
ABHD15                0.097   abhydrolase domain containing 15 
ABHD2                 0.094   alpha/beta hydrolase domain containing protein 2 [Ho...
ABHD2                 0.094   alpha/beta hydrolase domain containing protein 2 [Ho...
SLC45A2               0.009   membrane-associated transporter protein isoform a [H...
SLC45A2               0.009   membrane-associated transporter protein isoform b [H...
MYO9B                 0.006   myosin IXB isoform 2 
MYO9B                 0.006   myosin IXB isoform 1 
CYP2A13               0.005   cytochrome P450, family 2, subfamily A, polypeptide ...
HEATR1                0.005   protein BAP28 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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