Guide to the Human Genome
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Name: IL17RC Sequence: fasta or formatted (791aa) NCBI GI: 24430197
Description:

interleukin 17 receptor C isoform 1 precursor

Referenced in:

Interleukins and Their Receptors

Other entries for this name:
alt prot [720aa] interleukin 17 receptor C isoform 2 precursor
alt prot [705aa] interleukin 17 receptor C isoform 3 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.6         76           3
 C cysteine            3.5         28           1
 D aspartate           5.3         42           3
 E glutamate           5.1         40           2
 F phenylalanine       2.5         20           1
 G glycine             7.8         62           2
 H histidine           2.4         19           1
 I isoleucine          1.3         10           2
 K lysine              2.4         19           2
 L leucine            15.3        121           3
 M methionine          0.3          2           1
 N asparagine          2.0         16           1
 P proline             8.2         65           2
 Q glutamine           5.9         47           2
 R arginine            6.2         49           2
 S serine              7.1         56           2
 T threonine           3.2         25           1
 V valine              7.5         59           3
 W tryptophan          3.2         25           1
 Y tyrosine            1.3         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   interleukin 17 receptor C isoform 1 precursor 
IL17RC                0.870   interleukin 17 receptor C isoform 2 precursor 
IL17RC                0.841   interleukin 17 receptor C isoform 3 precursor 
IL17RE                0.046   interleukin 17 receptor E isoform 1 
IL17RE                0.046   interleukin 17 receptor E isoform 2 
IL17RE                0.046   interleukin 17 receptor E isoform 1 
IL17REL               0.029   interleukin 17 receptor E-like 
IL17RA                0.019   interleukin 17A receptor precursor 
NRG2                  0.007   neuregulin 2 isoform 2 
NRG2                  0.007   neuregulin 2 isoform 4 
NRG2                  0.007   neuregulin 2 isoform 3 
NRG2                  0.007   neuregulin 2 isoform 1 
SMARCA4               0.006   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.006   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.006   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.006   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.006   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.006   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.006   SWI/SNF-related matrix-associated actin-dependent re...
LOC100292859          0.006   PREDICTED: hypothetical protein 
LOC100289031          0.006   PREDICTED: hypothetical protein 
LOC100289031          0.006   PREDICTED: hypothetical protein XP_002343473 
ALPK3                 0.006   alpha-kinase 3 
LOC100191040          0.005   hypothetical protein LOC100191040 
GLG1                  0.005   golgi apparatus protein 1 isoform 3 
GLG1                  0.005   golgi apparatus protein 1 isoform 2 
GLG1                  0.005   golgi apparatus protein 1 isoform 1 
RBM27                 0.005   RNA binding motif protein 27 
POU4F1                0.004   POU domain, class 4, transcription factor 1 
TNRC6A                0.004   trinucleotide repeat containing 6A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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