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Search of human proteins with 38524591
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|38524591 intramembrane protease 5 [Homo sapiens]
(684 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|38524591 intramembrane protease 5 [Homo sapiens] 1389 0.0
gi|41281782 signal peptide peptidase-like 2B isoform 2 [Homo sap... 489 e-138
gi|116734691 signal peptide peptidase-like 2B isoform 3 [Homo sa... 485 e-137
gi|21314755 signal peptide peptidase-like 2A [Homo sapiens] 367 e-101
gi|33413418 signal peptide peptidase 3 [Homo sapiens] 97 5e-20
gi|30581111 minor histocompatibility antigen 13 isoform 3 [Homo ... 70 6e-12
gi|30581109 minor histocompatibility antigen 13 isoform 2 [Homo ... 70 6e-12
gi|23308607 minor histocompatibility antigen 13 isoform 1 [Homo ... 69 1e-11
gi|209862835 cyclin D3 isoform 1 [Homo sapiens] 37 0.046
gi|209915553 cyclin D3 isoform 3 [Homo sapiens] 37 0.046
gi|4502619 cyclin D3 isoform 2 [Homo sapiens] 37 0.046
gi|189409125 transcription factor Dp family, member 3 [Homo sapi... 37 0.079
gi|168229226 hypothetical protein LOC401399 [Homo sapiens] 36 0.10
gi|52353340 olfactory receptor, family 56, subfamily B, member 1... 36 0.13
gi|38373682 pleckstrin homology domain containing family G membe... 35 0.18
gi|111154084 pleckstrin homology domain containing family G memb... 35 0.18
gi|111154088 pleckstrin homology domain containing family G memb... 35 0.18
gi|111154080 pleckstrin homology domain containing family G memb... 35 0.18
gi|111154078 pleckstrin homology domain containing family G memb... 35 0.18
gi|62422577 neurobeachin [Homo sapiens] 34 0.51
gi|4758646 kinesin family member 3B [Homo sapiens] 33 1.1
gi|122937341 hypothetical protein LOC388960 [Homo sapiens] 33 1.1
gi|224458301 family with sequence similarity 186, member A [Homo... 32 1.5
gi|209977080 REST corepressor 3 isoform a [Homo sapiens] 32 1.5
gi|8922733 REST corepressor 3 isoform d [Homo sapiens] 32 1.5
gi|98986325 dual oxidase activator 2 [Homo sapiens] 32 1.9
gi|117938759 GNAS complex locus XLas [Homo sapiens] 32 1.9
gi|57634514 SPANX-N2 protein [Homo sapiens] 32 1.9
gi|195972795 chemokine (C-C motif) receptor-like 2 isoform 2 [Ho... 32 1.9
gi|68215224 chemokine (C-C motif) receptor-like 2 isoform 1 [Hom... 32 1.9
>gi|38524591 intramembrane protease 5 [Homo sapiens]
Length = 684
Score = 1389 bits (3595), Expect = 0.0
Identities = 684/684 (100%), Positives = 684/684 (100%)
Query: 1 MACLGFLLPVGFLLLISTVAGGKYGVAHVVSENWSKDYCILFSSDYITLPRDLHHAPLLP 60
MACLGFLLPVGFLLLISTVAGGKYGVAHVVSENWSKDYCILFSSDYITLPRDLHHAPLLP
Sbjct: 1 MACLGFLLPVGFLLLISTVAGGKYGVAHVVSENWSKDYCILFSSDYITLPRDLHHAPLLP 60
Query: 61 LYDGTKAPWCPGEDSPHQAQLRSPSQRPLRQTTAMVMRGNCSFHTKGWLAQGQGAHGLLI 120
LYDGTKAPWCPGEDSPHQAQLRSPSQRPLRQTTAMVMRGNCSFHTKGWLAQGQGAHGLLI
Sbjct: 61 LYDGTKAPWCPGEDSPHQAQLRSPSQRPLRQTTAMVMRGNCSFHTKGWLAQGQGAHGLLI 120
Query: 121 VSRVSDQQCSDTTLAPQDPRQPLADLTIPVAMLHYADMLDILSHTRGEAVVRVAMYAPPE 180
VSRVSDQQCSDTTLAPQDPRQPLADLTIPVAMLHYADMLDILSHTRGEAVVRVAMYAPPE
Sbjct: 121 VSRVSDQQCSDTTLAPQDPRQPLADLTIPVAMLHYADMLDILSHTRGEAVVRVAMYAPPE 180
Query: 181 PIIDYNMLVIFILAVGTVAAGGYWAGLTEANRLQRRRARRGGGSGGHHQLQEAAAAEGAQ 240
PIIDYNMLVIFILAVGTVAAGGYWAGLTEANRLQRRRARRGGGSGGHHQLQEAAAAEGAQ
Sbjct: 181 PIIDYNMLVIFILAVGTVAAGGYWAGLTEANRLQRRRARRGGGSGGHHQLQEAAAAEGAQ 240
Query: 241 KEDNEDIPVDFTPAMTGVVVTLSCSLMLLLYFFYDHFVYVTIGIFGLGAGIGLYSCLSPL 300
KEDNEDIPVDFTPAMTGVVVTLSCSLMLLLYFFYDHFVYVTIGIFGLGAGIGLYSCLSPL
Sbjct: 241 KEDNEDIPVDFTPAMTGVVVTLSCSLMLLLYFFYDHFVYVTIGIFGLGAGIGLYSCLSPL 300
Query: 301 VCHLSLRQYQRPPHSLWASLPLPLLLLASLCATVIIFWVAYRNEDRWAWLLQDTLGISYC 360
VCHLSLRQYQRPPHSLWASLPLPLLLLASLCATVIIFWVAYRNEDRWAWLLQDTLGISYC
Sbjct: 301 VCHLSLRQYQRPPHSLWASLPLPLLLLASLCATVIIFWVAYRNEDRWAWLLQDTLGISYC 360
Query: 361 LFVLHRVRLPTLKNCSSFLLALLAFDVFFVFVTPFFTKTGESIMAQVALGPAESSSHERL 420
LFVLHRVRLPTLKNCSSFLLALLAFDVFFVFVTPFFTKTGESIMAQVALGPAESSSHERL
Sbjct: 361 LFVLHRVRLPTLKNCSSFLLALLAFDVFFVFVTPFFTKTGESIMAQVALGPAESSSHERL 420
Query: 421 PMVLKVPRLRVSALTLCSQPFSILGFGDIVVPGFLVAYCCRFDVQVCSRQIYFVACTVAY 480
PMVLKVPRLRVSALTLCSQPFSILGFGDIVVPGFLVAYCCRFDVQVCSRQIYFVACTVAY
Sbjct: 421 PMVLKVPRLRVSALTLCSQPFSILGFGDIVVPGFLVAYCCRFDVQVCSRQIYFVACTVAY 480
Query: 481 AVGLLVTFMAMVLMQMGQPALLYLVSSTLLTSLAVAACRQELSLFWTGQGRAKMCGLGCA 540
AVGLLVTFMAMVLMQMGQPALLYLVSSTLLTSLAVAACRQELSLFWTGQGRAKMCGLGCA
Sbjct: 481 AVGLLVTFMAMVLMQMGQPALLYLVSSTLLTSLAVAACRQELSLFWTGQGRAKMCGLGCA 540
Query: 541 PSAGSRQKQEGAADAHTASTLERGTSRGAGDLDSNPGEDTTEIVTISENEATNPEDRSDS 600
PSAGSRQKQEGAADAHTASTLERGTSRGAGDLDSNPGEDTTEIVTISENEATNPEDRSDS
Sbjct: 541 PSAGSRQKQEGAADAHTASTLERGTSRGAGDLDSNPGEDTTEIVTISENEATNPEDRSDS 600
Query: 601 SEGWSDAHLDPNELPFIPPGASEELMPLMPMAMLIPLMPLMPPPSELGHVHAQAQAHETG 660
SEGWSDAHLDPNELPFIPPGASEELMPLMPMAMLIPLMPLMPPPSELGHVHAQAQAHETG
Sbjct: 601 SEGWSDAHLDPNELPFIPPGASEELMPLMPMAMLIPLMPLMPPPSELGHVHAQAQAHETG 660
Query: 661 LPWAGLHKRKGLKVRKSMSTQAPL 684
LPWAGLHKRKGLKVRKSMSTQAPL
Sbjct: 661 LPWAGLHKRKGLKVRKSMSTQAPL 684
>gi|41281782 signal peptide peptidase-like 2B isoform 2 [Homo
sapiens]
Length = 592
Score = 489 bits (1258), Expect = e-138
Identities = 287/624 (45%), Positives = 366/624 (58%), Gaps = 53/624 (8%)
Query: 8 LPVGFLLLISTVAGGKYGVAHVVSENWS---KDYCILFSSDYITLPRDLHHAPLLPLYDG 64
L FLLL + VA +YG+ HVVS+ KDYCIL++ + LP DL A L L +
Sbjct: 12 LLAAFLLLAAQVAC-EYGMVHVVSQAGGPEGKDYCILYNPQWAHLPHDLSKASFLQLRNW 70
Query: 65 TKAPWCPGEDSPHQAQLRSPSQRPLRQTTAMVMRGNCSFHTKGWLAQGQGAHGLLIVSRV 124
T + C D P R +V RGNC+F+ K LAQG GA GLLIVSR
Sbjct: 71 TASLLCSAADLP---------ARGFSNQIPLVARGNCTFYEKVRLAQGSGARGLLIVSR- 120
Query: 125 SDQQCSDTTLAPQDPRQPLADLTIPVAMLHYADMLDILSHTRGEAVVRVAMYAPPEPIID 184
+ + P + ++ IPVA+L Y DMLDI TR VR A+YAP EP++D
Sbjct: 121 ------ERLVPPGGNKTQYDEIGIPVALLSYKDMLDIF--TRFGRTVRAALYAPKEPVLD 172
Query: 185 YNMLVIFILAVGTVAAGGYWAGLTEANRLQRRRARRGGGSGGHHQLQEAAAAEGAQKEDN 244
YNM++IFI+AVGTVA GGYWAG + + + R G E
Sbjct: 173 YNMVIIFIMAVGTVAIGGYWAGSRDVKKRYMKHKRDDG------------------PEKQ 214
Query: 245 EDIPVDFTPAMTGVVVTLSCSLMLLLYFFYDHFVYVTIGIFGLGAGIGLYSCLSPLVCHL 304
ED VD TP MT V V + CS+++LLY+FYD VYV IGIF L + GLYSCL+P V L
Sbjct: 215 EDEAVDVTPVMTCVFVVMCCSMLVLLYYFYDLLVYVVIGIFCLASATGLYSCLAPCVRRL 274
Query: 305 SLRQYQRPPHSLWASLPLP---LLLLASLCATVIIFWVAYRNEDRWAWLLQDTLGISYCL 361
+ + P +SL P +LLLA C V + W +RNED+WAW+LQD LGI++CL
Sbjct: 275 PFGKCRIPNNSLPYFHKRPQARMLLLALFCVAVSVVWGVFRNEDQWAWVLQDALGIAFCL 334
Query: 362 FVLHRVRLPTLKNCSSFLLALLAFDVFFVFVTPFFTKTGESIMAQVALGPAESSSHERLP 421
++L +RLPT K C+ LL L +D+FFVF+TPF TK+G SIM +VA GP++S++ E+LP
Sbjct: 335 YMLKTIRLPTFKACTLLLLVLFLYDIFFVFITPFLTKSGSSIMVEVATGPSDSATREKLP 394
Query: 422 MVLKVPRLRVSALTLCSQPFSILGFGDIVVPGFLVAYCCRFDVQVCSRQIYFVACTVAYA 481
MVLKVPRL S L LC +PFS+LGFGDI+VPG LVAYC RFD+QV S ++YFVACT+AY
Sbjct: 395 MVLKVPRLNSSPLALCDRPFSLLGFGDILVPGLLVAYCHRFDIQVQSSRVYFVACTIAYG 454
Query: 482 VGLLVTFMAMVLMQMGQPALLYLVSSTLLTSLAVAACRQELSLFWTGQGRAKM---CGLG 538
VGLLVTF+A+ LMQ GQPALLYLV TL+TS AVA R+EL +FWTG G AK+
Sbjct: 455 VGLLVTFVALALMQRGQPALLYLVPCTLVTSCAVALWRRELGVFWTGSGFAKVLPPSPWA 514
Query: 539 CAPSAGSRQKQEGAADAHTASTLERGTSRGAGDLDSNPGEDTTEIVTISENEATNPEDRS 598
AP+ G + ++ A E + P E + + T E A P R
Sbjct: 515 PAPADGPQPPKDSATPLSPQPPSEEPAT------SPWPAEQSPKSRTSEEMGAGAPM-RE 567
Query: 599 DSSEGWSDAHLDPNELPFIPPGAS 622
S S+ P PGAS
Sbjct: 568 PGSPAESEGRDQAQPSPVTQPGAS 591
>gi|116734691 signal peptide peptidase-like 2B isoform 3 [Homo
sapiens]
Length = 511
Score = 485 bits (1248), Expect = e-137
Identities = 267/531 (50%), Positives = 337/531 (63%), Gaps = 43/531 (8%)
Query: 8 LPVGFLLLISTVAGGKYGVAHVVSENWS---KDYCILFSSDYITLPRDLHHAPLLPLYDG 64
L FLLL + VA +YG+ HVVS+ KDYCIL++ + LP DL A L L +
Sbjct: 12 LLAAFLLLAAQVAC-EYGMVHVVSQAGGPEGKDYCILYNPQWAHLPHDLSKASFLQLRNW 70
Query: 65 TKAPWCPGEDSPHQAQLRSPSQRPLRQTTAMVMRGNCSFHTKGWLAQGQGAHGLLIVSRV 124
T + C D P R +V RGNC+F+ K LAQG GA GLLIVSR
Sbjct: 71 TASLLCSAADLP---------ARGFSNQIPLVARGNCTFYEKVRLAQGSGARGLLIVSR- 120
Query: 125 SDQQCSDTTLAPQDPRQPLADLTIPVAMLHYADMLDILSHTRGEAVVRVAMYAPPEPIID 184
+ + P + ++ IPVA+L Y DMLDI TR VR A+YAP EP++D
Sbjct: 121 ------ERLVPPGGNKTQYDEIGIPVALLSYKDMLDIF--TRFGRTVRAALYAPKEPVLD 172
Query: 185 YNMLVIFILAVGTVAAGGYWAGLTEANRLQRRRARRGGGSGGHHQLQEAAAAEGAQKEDN 244
YNM++IFI+AVGTVA GGYWAG + + + R G E
Sbjct: 173 YNMVIIFIMAVGTVAIGGYWAGSRDVKKRYMKHKRDDG------------------PEKQ 214
Query: 245 EDIPVDFTPAMTGVVVTLSCSLMLLLYFFYDHFVYVTIGIFGLGAGIGLYSCLSPLVCHL 304
ED VD TP MT V V + CS+++LLY+FYD VYV IGIF L + GLYSCL+P V L
Sbjct: 215 EDEAVDVTPVMTCVFVVMCCSMLVLLYYFYDLLVYVVIGIFCLASATGLYSCLAPCVRRL 274
Query: 305 SLRQYQRPPHSLWASLPLP---LLLLASLCATVIIFWVAYRNEDRWAWLLQDTLGISYCL 361
+ + P +SL P +LLLA C V + W +RNED+WAW+LQD LGI++CL
Sbjct: 275 PFGKCRIPNNSLPYFHKRPQARMLLLALFCVAVSVVWGVFRNEDQWAWVLQDALGIAFCL 334
Query: 362 FVLHRVRLPTLKNCSSFLLALLAFDVFFVFVTPFFTKTGESIMAQVALGPAESSSHERLP 421
++L +RLPT K C+ LL L +D+FFVF+TPF TK+G SIM +VA GP++S++ E+LP
Sbjct: 335 YMLKTIRLPTFKACTLLLLVLFLYDIFFVFITPFLTKSGSSIMVEVATGPSDSATREKLP 394
Query: 422 MVLKVPRLRVSALTLCSQPFSILGFGDIVVPGFLVAYCCRFDVQVCSRQIYFVACTVAYA 481
MVLKVPRL S L LC +PFS+LGFGDI+VPG LVAYC RFD+QV S ++YFVACT+AY
Sbjct: 395 MVLKVPRLNSSPLALCDRPFSLLGFGDILVPGLLVAYCHRFDIQVQSSRVYFVACTIAYG 454
Query: 482 VGLLVTFMAMVLMQMGQPALLYLVSSTLLTSLAVAACRQELSLFWTGQGRA 532
VGLLVTF+A+ LMQ GQPALLYLV TL+TS AVA R+EL +FWTG G A
Sbjct: 455 VGLLVTFVALALMQRGQPALLYLVPCTLVTSCAVALWRRELGVFWTGSGFA 505
>gi|21314755 signal peptide peptidase-like 2A [Homo sapiens]
Length = 520
Score = 367 bits (942), Expect = e-101
Identities = 208/537 (38%), Positives = 302/537 (56%), Gaps = 44/537 (8%)
Query: 5 GFLLPVGFLLLISTVAGGKYGVAHVVSENWSKDYCILFSSDYITLPRDLHHAPLLPLYDG 64
G L GFLL ++ + + H +KDYC+L++ + LP L +A + L +
Sbjct: 11 GAALLWGFLLQLTAA---QEAILHASGNGTTKDYCMLYNPYWTALPSTLENATSISLMNL 67
Query: 65 TKAPWCPGEDSPHQAQLRSPSQRPLRQTTAMVMRGNCSFHTKGWLAQGQGAHGLLIVSRV 124
T P C D P ++ +V G+C F K +AQ GA +L+V+
Sbjct: 68 TSTPLCNLSDIPPVG---------IKSKAVVVPWGSCHFLEKARIAQKGGAEAMLVVN-- 116
Query: 125 SDQQCSDTTLAPQDPRQPLADLTIPVAMLHYADMLDILSHTRGEAVVRVAMYAPPEPIID 184
+ P R D+ I +A + Y D D ++ T G+ + V MY+P P D
Sbjct: 117 -----NSVLFPPSGNRSEFPDVKILIAFISYKDFRD-MNQTLGDNIT-VKMYSPSWPNFD 169
Query: 185 YNMLVIFILAVGTVAAGGYWAGLTEANRLQRRRARRGGGSGGHHQLQEAAAAEGAQKEDN 244
Y M+VIF++AV TVA GGYW+GL E L+ A E +
Sbjct: 170 YTMVVIFVIAVFTVALGGYWSGLVELENLK------------------AVTTEDREMRKK 211
Query: 245 EDIPVDFTPAMTGVVVTLSCSLMLLLYFFYDHFVYVTIGIFGLGAGIGLYSCLSPLVCHL 304
++ + F+P + V + C +M+LLYFFY VYV I IF + + + LY+CL+ L+ +
Sbjct: 212 KEEYLTFSPLTVVIFVVICCVMMVLLYFFYKWLVYVMIAIFCIASAMSLYNCLAALIHKI 271
Query: 305 SLRQYQRPPHSLWASLPLPLLLLASLCATVIIFWVAYRNEDRWAWLLQDTLGISYCLFVL 364
Q ++ + L+ L+ LC V + W +RNEDRWAW+LQD LGI++CL ++
Sbjct: 272 PYGQCTIACRG--KNMEVRLIFLSGLCIAVAVVWAVFRNEDRWAWILQDILGIAFCLNLI 329
Query: 365 HRVRLPTLKNCSSFLLALLAFDVFFVFVTPFFTKTGESIMAQVALGPAESSSHERLPMVL 424
++LP K+C L LL +DVFFVF+TPF TK GESIM ++A GP ++E+LP+V+
Sbjct: 330 KTLKLPNFKSCVILLGLLLLYDVFFVFITPFITKNGESIMVELAAGPF--GNNEKLPVVI 387
Query: 425 KVPRL-RVSALTLCSQPFSILGFGDIVVPGFLVAYCCRFDVQVCSRQIYFVACTVAYAVG 483
+VP+L S +++C P SILGFGDI+VPG L+AYC RFDVQ S IY+V+ TVAYA+G
Sbjct: 388 RVPKLIYFSVMSVCLMPVSILGFGDIIVPGLLIAYCRRFDVQTGSSYIYYVSSTVAYAIG 447
Query: 484 LLVTFMAMVLMQMGQPALLYLVSSTLLTSLAVAACRQELSLFWTGQGRAKMCGLGCA 540
+++TF+ +VLM+ GQPALLYLV TL+T+ VA R+E+ FW G M L CA
Sbjct: 448 MILTFVVLVLMKKGQPALLYLVPCTLITASVVAWRRKEMKKFWKGNSYQMMDHLDCA 504
>gi|33413418 signal peptide peptidase 3 [Homo sapiens]
Length = 384
Score = 97.1 bits (240), Expect = 5e-20
Identities = 82/293 (27%), Positives = 132/293 (45%), Gaps = 39/293 (13%)
Query: 267 MLLLYFFYDHFVYVTIGIFGLGAGIGLYSCLSPLVCHLS--LRQYQRPPHSLWASLPLPL 324
+L+++FF+D V + A I L P+ +L+ +
Sbjct: 84 LLVMFFFFDSVQVVFTICTAVLATIAFAFLLLPMCQYLTRPCSPQNKISFGCCGRFTAAE 143
Query: 325 LLLASLCATVIIFWVAYRNEDRWAWLLQDTLGISYCLFVLHRVRLPTLKNCSSFLLALLA 384
LL SL +++ WV + WLL D L + C+ ++ VRLP+LK L LL
Sbjct: 144 LLSFSLSVMLVLIWVLTGH-----WLLMDALAMGLCVAMIAFVRLPSLKVSCLLLSGLLI 198
Query: 385 FDVFFVFVTPFFTKTGESIMAQVALGPAES-------SSHERLPMVLKVPRLRVSALTL- 436
+DVF+VF + + + ++M +VA PA++ H + VPRL + +
Sbjct: 199 YDVFWVFFSAYIFNS--NVMVKVATQPADNPLDVLSRKLHLGPNVGRDVPRLSLPGKLVF 256
Query: 437 ---CSQPFSILGFGDIVVPGFLVAYCCRFD------------------VQVCSRQIYFVA 475
FS+LG GDIV+PG L+ + R+D + +++ +
Sbjct: 257 PSSTGSHFSMLGIGDIVMPGLLLCFVLRYDNYKKQASGDSCGAPGPANISGRMQKVSYFH 316
Query: 476 CT-VAYAVGLLVTFMAMVLMQMGQPALLYLVSSTLLTSLAVAACRQELSLFWT 527
CT + Y VGLL +A + + QPALLYLV TLL L +A + +L W+
Sbjct: 317 CTLIGYFVGLLTATVASRIHRAAQPALLYLVPFTLLPLLTMAYLKGDLRRMWS 369
>gi|30581111 minor histocompatibility antigen 13 isoform 3 [Homo
sapiens]
Length = 426
Score = 70.1 bits (170), Expect = 6e-12
Identities = 50/204 (24%), Positives = 90/204 (44%), Gaps = 21/204 (10%)
Query: 332 ATVIIFWVAYRNEDRWAWLLQDTLGISYCLFVLHRVRLPTLKNCSSFLLALLAFDVFFVF 391
++++ W R W+ + G+++ L + + L + L L +DVF+VF
Sbjct: 169 SSIVGVWYLLRKH----WIANNLFGLAFSLNGVELLHLNNVSTGCILLGGLFIYDVFWVF 224
Query: 392 VTPFFTKTGESIMAQVALGPAESSSHERLPMVLKVPRLRVSALTLCSQPFSILGFGDIVV 451
T +S A + L + + L + F++LG GD+V+
Sbjct: 225 GTNVMVTVAKSFEAPIKLVFPQDLLEKGLE----------------ANNFAMLGLGDVVI 268
Query: 452 PGFLVAYCCRFDVQVCSR-QIYFVACTVAYAVGLLVTFMAMVLMQMGQPALLYLVSSTLL 510
PG +A RFD+ + YF AY GL +T M + + QPALLYLV + +
Sbjct: 269 PGIFIALLLRFDISLKKNTHTYFYTSFAAYIFGLGLTIFIMHIFKHAQPALLYLVPACIG 328
Query: 511 TSLAVAACRQELSLFWTGQGRAKM 534
+ VA + E++ ++ + A++
Sbjct: 329 FPVLVALAKGEVTEMFSYESSAEI 352
>gi|30581109 minor histocompatibility antigen 13 isoform 2 [Homo
sapiens]
Length = 394
Score = 70.1 bits (170), Expect = 6e-12
Identities = 50/204 (24%), Positives = 90/204 (44%), Gaps = 21/204 (10%)
Query: 332 ATVIIFWVAYRNEDRWAWLLQDTLGISYCLFVLHRVRLPTLKNCSSFLLALLAFDVFFVF 391
++++ W R W+ + G+++ L + + L + L L +DVF+VF
Sbjct: 169 SSIVGVWYLLRKH----WIANNLFGLAFSLNGVELLHLNNVSTGCILLGGLFIYDVFWVF 224
Query: 392 VTPFFTKTGESIMAQVALGPAESSSHERLPMVLKVPRLRVSALTLCSQPFSILGFGDIVV 451
T +S A + L + + L + F++LG GD+V+
Sbjct: 225 GTNVMVTVAKSFEAPIKLVFPQDLLEKGLE----------------ANNFAMLGLGDVVI 268
Query: 452 PGFLVAYCCRFDVQVCSR-QIYFVACTVAYAVGLLVTFMAMVLMQMGQPALLYLVSSTLL 510
PG +A RFD+ + YF AY GL +T M + + QPALLYLV + +
Sbjct: 269 PGIFIALLLRFDISLKKNTHTYFYTSFAAYIFGLGLTIFIMHIFKHAQPALLYLVPACIG 328
Query: 511 TSLAVAACRQELSLFWTGQGRAKM 534
+ VA + E++ ++ + A++
Sbjct: 329 FPVLVALAKGEVTEMFSYESSAEI 352
>gi|23308607 minor histocompatibility antigen 13 isoform 1 [Homo
sapiens]
Length = 377
Score = 68.9 bits (167), Expect = 1e-11
Identities = 49/193 (25%), Positives = 84/193 (43%), Gaps = 21/193 (10%)
Query: 332 ATVIIFWVAYRNEDRWAWLLQDTLGISYCLFVLHRVRLPTLKNCSSFLLALLAFDVFFVF 391
++++ W R W+ + G+++ L + + L + L L +DVF+VF
Sbjct: 169 SSIVGVWYLLRKH----WIANNLFGLAFSLNGVELLHLNNVSTGCILLGGLFIYDVFWVF 224
Query: 392 VTPFFTKTGESIMAQVALGPAESSSHERLPMVLKVPRLRVSALTLCSQPFSILGFGDIVV 451
T +S A + L + + L + F++LG GD+V+
Sbjct: 225 GTNVMVTVAKSFEAPIKLVFPQDLLEKGLE----------------ANNFAMLGLGDVVI 268
Query: 452 PGFLVAYCCRFDVQVCSR-QIYFVACTVAYAVGLLVTFMAMVLMQMGQPALLYLVSSTLL 510
PG +A RFD+ + YF AY GL +T M + + QPALLYLV + +
Sbjct: 269 PGIFIALLLRFDISLKKNTHTYFYTSFAAYIFGLGLTIFIMHIFKHAQPALLYLVPACIG 328
Query: 511 TSLAVAACRQELS 523
+ VA + E++
Sbjct: 329 FPVLVALAKGEVT 341
>gi|209862835 cyclin D3 isoform 1 [Homo sapiens]
Length = 211
Score = 37.4 bits (85), Expect = 0.046
Identities = 26/96 (27%), Positives = 36/96 (37%), Gaps = 5/96 (5%)
Query: 349 WLLQDTLGISYCLFVLHRVRLPT-----LKNCSSFLLALLAFDVFFVFVTPFFTKTGESI 403
W L + + F+LHR+ LP +K + LAL A D F P TG
Sbjct: 69 WDLAAVIAHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIG 128
Query: 404 MAQVALGPAESSSHERLPMVLKVPRLRVSALTLCSQ 439
A LG S E ++ + V L C +
Sbjct: 129 AAVQGLGACSMSGDELTELLAGITGTEVDCLRACQE 164
>gi|209915553 cyclin D3 isoform 3 [Homo sapiens]
Length = 220
Score = 37.4 bits (85), Expect = 0.046
Identities = 26/96 (27%), Positives = 36/96 (37%), Gaps = 5/96 (5%)
Query: 349 WLLQDTLGISYCLFVLHRVRLPT-----LKNCSSFLLALLAFDVFFVFVTPFFTKTGESI 403
W L + + F+LHR+ LP +K + LAL A D F P TG
Sbjct: 78 WDLAAVIAHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIG 137
Query: 404 MAQVALGPAESSSHERLPMVLKVPRLRVSALTLCSQ 439
A LG S E ++ + V L C +
Sbjct: 138 AAVQGLGACSMSGDELTELLAGITGTEVDCLRACQE 173
>gi|4502619 cyclin D3 isoform 2 [Homo sapiens]
Length = 292
Score = 37.4 bits (85), Expect = 0.046
Identities = 26/96 (27%), Positives = 36/96 (37%), Gaps = 5/96 (5%)
Query: 349 WLLQDTLGISYCLFVLHRVRLPT-----LKNCSSFLLALLAFDVFFVFVTPFFTKTGESI 403
W L + + F+LHR+ LP +K + LAL A D F P TG
Sbjct: 150 WDLAAVIAHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIG 209
Query: 404 MAQVALGPAESSSHERLPMVLKVPRLRVSALTLCSQ 439
A LG S E ++ + V L C +
Sbjct: 210 AAVQGLGACSMSGDELTELLAGITGTEVDCLRACQE 245
>gi|189409125 transcription factor Dp family, member 3 [Homo
sapiens]
Length = 405
Score = 36.6 bits (83), Expect = 0.079
Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 626 MPLMPMAMLIPLMPLMPPPSELGHVHAQAQAHETGLPWAGLHKRKGLK 673
MP P A IP++ PPS H +Q Q + PWAG H RKG K
Sbjct: 61 MPQRPAASNIPVVGSPNPPST--HFASQNQHSYSSPPWAGQHNRKGEK 106
>gi|168229226 hypothetical protein LOC401399 [Homo sapiens]
Length = 899
Score = 36.2 bits (82), Expect = 0.10
Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 15/110 (13%)
Query: 284 IFGLGAGIGLYSCLSPLVCHLSLRQYQRPPHSLWASLPLPLLLLASLCATVIIFWVAYRN 343
++G+GA GL + L+ L L+L ++ PP + +L LLL A +F+ AY +
Sbjct: 367 VYGVGALFGLVALLALLA--LALLPWRCPPGAPCLALLDLLLLSAGTTRAFPLFYDAYGH 424
Query: 344 EDR---WAWLLQDTL-------GISYCLFVLHRVRLPTLKNCSSFLLALL 383
DR AWLL L G+ +L R R P C + L ALL
Sbjct: 425 RDRLPALAWLLLQDLPLPCLAAGLGLACLLLARPRPP---RCPTGLAALL 471
>gi|52353340 olfactory receptor, family 56, subfamily B, member 1
[Homo sapiens]
Length = 324
Score = 35.8 bits (81), Expect = 0.13
Identities = 41/164 (25%), Positives = 68/164 (41%), Gaps = 25/164 (15%)
Query: 317 WASLPLPLLLLASLCATVIIFWVAYRNEDRWAWLLQDTLGISYCLFVLHRVRLPTLKNCS 376
W SLPL LL L++L A +I + ++N LQ + I L +L V +
Sbjct: 35 WLSLPLALLYLSALAANTLILIIIWQNPS-----LQQPMYI--FLGILCMVDMGLATTII 87
Query: 377 SFLLALLAFDVFF---------VFVTPFFTKTGESIMAQVALGPAESSSHERLPMVLKVP 427
+LA+ FD ++ FF I+ +A + H L+ P
Sbjct: 88 PKILAIFWFDAKVISLPECFAQIYAIHFFVGMESGILLCMAFDRYVAICHP-----LRYP 142
Query: 428 RLRVSALTLCSQPFSILGFGDIVVPGFLVA----YCCRFDVQVC 467
+ S+L L + F +L G V P ++A YC + +++ C
Sbjct: 143 SIVTSSLILKATLFMVLRNGLFVTPVPVLAAQRDYCSKNEIEHC 186
>gi|38373682 pleckstrin homology domain containing family G member 5
isoform a [Homo sapiens]
Length = 1006
Score = 35.4 bits (80), Expect = 0.18
Identities = 34/119 (28%), Positives = 50/119 (42%), Gaps = 19/119 (15%)
Query: 542 SAGSRQKQEGAADAHTAS----TLERGTSRGAGDLDSNP----GEDTTEIVTISENEATN 593
S+GS Q A+D T + +E G + + + DS P ++T+ T S T+
Sbjct: 741 SSGSPDSQHCASDGSTETLAMVVVEPGDTLSSPEFDSGPFSSQSDETSLSTTASSATPTS 800
Query: 594 ------PEDRSDSSEGWSDAHLDPNELP-FIPPGASEELMPLMPMAMLIPLMPLMPPPS 645
P D S + L P L F+ PG EL+P P + +P PPPS
Sbjct: 801 ELLPLGPVDGRSCSMDSAYGTLSPTSLQDFVAPGPMAELVPRAPESPRVP----SPPPS 855
>gi|111154084 pleckstrin homology domain containing family G member
5 isoform b [Homo sapiens]
Length = 1083
Score = 35.4 bits (80), Expect = 0.18
Identities = 34/119 (28%), Positives = 50/119 (42%), Gaps = 19/119 (15%)
Query: 542 SAGSRQKQEGAADAHTAS----TLERGTSRGAGDLDSNP----GEDTTEIVTISENEATN 593
S+GS Q A+D T + +E G + + + DS P ++T+ T S T+
Sbjct: 818 SSGSPDSQHCASDGSTETLAMVVVEPGDTLSSPEFDSGPFSSQSDETSLSTTASSATPTS 877
Query: 594 ------PEDRSDSSEGWSDAHLDPNELP-FIPPGASEELMPLMPMAMLIPLMPLMPPPS 645
P D S + L P L F+ PG EL+P P + +P PPPS
Sbjct: 878 ELLPLGPVDGRSCSMDSAYGTLSPTSLQDFVAPGPMAELVPRAPESPRVP----SPPPS 932
>gi|111154088 pleckstrin homology domain containing family G member
5 isoform a [Homo sapiens]
Length = 1006
Score = 35.4 bits (80), Expect = 0.18
Identities = 34/119 (28%), Positives = 50/119 (42%), Gaps = 19/119 (15%)
Query: 542 SAGSRQKQEGAADAHTAS----TLERGTSRGAGDLDSNP----GEDTTEIVTISENEATN 593
S+GS Q A+D T + +E G + + + DS P ++T+ T S T+
Sbjct: 741 SSGSPDSQHCASDGSTETLAMVVVEPGDTLSSPEFDSGPFSSQSDETSLSTTASSATPTS 800
Query: 594 ------PEDRSDSSEGWSDAHLDPNELP-FIPPGASEELMPLMPMAMLIPLMPLMPPPS 645
P D S + L P L F+ PG EL+P P + +P PPPS
Sbjct: 801 ELLPLGPVDGRSCSMDSAYGTLSPTSLQDFVAPGPMAELVPRAPESPRVP----SPPPS 855
>gi|111154080 pleckstrin homology domain containing family G member
5 isoform a [Homo sapiens]
Length = 1006
Score = 35.4 bits (80), Expect = 0.18
Identities = 34/119 (28%), Positives = 50/119 (42%), Gaps = 19/119 (15%)
Query: 542 SAGSRQKQEGAADAHTAS----TLERGTSRGAGDLDSNP----GEDTTEIVTISENEATN 593
S+GS Q A+D T + +E G + + + DS P ++T+ T S T+
Sbjct: 741 SSGSPDSQHCASDGSTETLAMVVVEPGDTLSSPEFDSGPFSSQSDETSLSTTASSATPTS 800
Query: 594 ------PEDRSDSSEGWSDAHLDPNELP-FIPPGASEELMPLMPMAMLIPLMPLMPPPS 645
P D S + L P L F+ PG EL+P P + +P PPPS
Sbjct: 801 ELLPLGPVDGRSCSMDSAYGTLSPTSLQDFVAPGPMAELVPRAPESPRVP----SPPPS 855
>gi|111154078 pleckstrin homology domain containing family G member
5 isoform c [Homo sapiens]
Length = 1062
Score = 35.4 bits (80), Expect = 0.18
Identities = 34/119 (28%), Positives = 50/119 (42%), Gaps = 19/119 (15%)
Query: 542 SAGSRQKQEGAADAHTAS----TLERGTSRGAGDLDSNP----GEDTTEIVTISENEATN 593
S+GS Q A+D T + +E G + + + DS P ++T+ T S T+
Sbjct: 797 SSGSPDSQHCASDGSTETLAMVVVEPGDTLSSPEFDSGPFSSQSDETSLSTTASSATPTS 856
Query: 594 ------PEDRSDSSEGWSDAHLDPNELP-FIPPGASEELMPLMPMAMLIPLMPLMPPPS 645
P D S + L P L F+ PG EL+P P + +P PPPS
Sbjct: 857 ELLPLGPVDGRSCSMDSAYGTLSPTSLQDFVAPGPMAELVPRAPESPRVP----SPPPS 911
>gi|62422577 neurobeachin [Homo sapiens]
Length = 2946
Score = 33.9 bits (76), Expect = 0.51
Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 14/116 (12%)
Query: 559 STLERGTSRGAGDLDSNPGED---TTEIVTISENEATNPED--RSDSSEGWSDAHLDPNE 613
STL + L NP E T I +IS+ + N ++ +S + A P
Sbjct: 1705 STLSSEVKKSQESLTENPSETLKPATSISSISQTKGINVKEILKSLVAAPVEIAECGPEP 1764
Query: 614 LPFIPPGASEELMPLMPM-------AMLIPLMPLMPPPSELGHVHAQAQAHETGLP 662
+P+ P E ++PM ++++P+ PPP L A +GLP
Sbjct: 1765 IPYPDPALKRETQAILPMQFHSFDRSVVVPVK--KPPPGSLAVTTVGATTAGSGLP 1818
>gi|4758646 kinesin family member 3B [Homo sapiens]
Length = 747
Score = 32.7 bits (73), Expect = 1.1
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 212 RLQRRRARRGGGSGGHHQLQEAAAAEGAQKEDNED 246
R +R + R GGGSGG + +E EG ++ D++D
Sbjct: 377 RKRREKRREGGGSGGGGEEEEEEGEEGEEEGDDKD 411
>gi|122937341 hypothetical protein LOC388960 [Homo sapiens]
Length = 922
Score = 32.7 bits (73), Expect = 1.1
Identities = 41/163 (25%), Positives = 63/163 (38%), Gaps = 14/163 (8%)
Query: 492 VLMQMGQPALLYLVSSTLLTSLAVAACRQELSLFWTGQGRAKMCGLGCAPSAGSRQKQEG 551
VL + + Y VSS +T +V L + T G C P K
Sbjct: 258 VLPPVSTSGMYYSVSSQPITETSVQVMETSLGMD-TSLGLQSPSQTFCLPQTPEFSK--- 313
Query: 552 AADAHTASTLERGTSRGAGDLDSNPGEDTTEIVTIS------ENEATNPEDRSDSSEGWS 605
+ + TLE S GD+ P + T ++T+S +NE N ++ +
Sbjct: 314 SFSSRNTQTLESNPSPELGDISITPVQSPTNLLTLSPAPSQEKNENENLDEIKTNLSKPL 373
Query: 606 DAH--LDPNELPFIPPGASEELMPLMPMAMLIPLMPLMPPPSE 646
D H L N+ P + P ++ PL +A + PL P SE
Sbjct: 374 DVHQILIGNQDPPLLPVEIPDIHPL--LACIDPLGQEEQPGSE 414
>gi|224458301 family with sequence similarity 186, member A [Homo
sapiens]
Length = 2351
Score = 32.3 bits (72), Expect = 1.5
Identities = 22/52 (42%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Query: 614 LPFIPPGASEELMPLMP---MAMLIPLMPLMPPPSELGHVHAQAQAHETGLP 662
+P IPP A E +PL P A+ IPL P ELG QA E G+P
Sbjct: 1553 IPLIPPQAQELEIPLTPQQAQALGIPLTP--QQAQELGIPLTPQQAQELGIP 1602
Score = 31.2 bits (69), Expect = 3.3
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 614 LPFIPPGASEELMPLMP-MAMLIPLMPLMPPPSELGHVHAQAQAHETGLP 662
+P IPP A E +PL P A + ++ + P ELG QA G+P
Sbjct: 1481 IPLIPPQAQELGIPLTPQQAQALGILLIPPQAQELGIPLTPQQAQALGIP 1530
Score = 31.2 bits (69), Expect = 3.3
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 614 LPFIPPGASEELMPLMPMAMLIPLMPLMPPPS-ELGHVHAQAQAHETGLP 662
+P IPP A E +PL P + +PL+PP + EL QA G+P
Sbjct: 1529 IPLIPPQAQELGIPLTPQQVQALGIPLIPPQAQELEIPLTPQQAQALGIP 1578
>gi|209977080 REST corepressor 3 isoform a [Homo sapiens]
Length = 553
Score = 32.3 bits (72), Expect = 1.5
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 8/82 (9%)
Query: 562 ERGTSRGAGDLDSNPGEDTTEIVTISENEATNPEDRSDSSEGWSDAHLDPNELPFIPPGA 621
E+GT GD S GE+T + ++T+ E+ + + + P L PP
Sbjct: 405 EQGTQASNGDA-STLGEETKSASNVPSGKSTDEEEEAQTPQA-------PRTLGPSPPAP 456
Query: 622 SEELMPLMPMAMLIPLMPLMPP 643
S P P+A L PL+ P
Sbjct: 457 SSTPTPTAPIATLNQPPPLLRP 478
>gi|8922733 REST corepressor 3 isoform d [Homo sapiens]
Length = 495
Score = 32.3 bits (72), Expect = 1.5
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 8/82 (9%)
Query: 562 ERGTSRGAGDLDSNPGEDTTEIVTISENEATNPEDRSDSSEGWSDAHLDPNELPFIPPGA 621
E+GT GD S GE+T + ++T+ E+ + + + P L PP
Sbjct: 347 EQGTQASNGDA-STLGEETKSASNVPSGKSTDEEEEAQTPQA-------PRTLGPSPPAP 398
Query: 622 SEELMPLMPMAMLIPLMPLMPP 643
S P P+A L PL+ P
Sbjct: 399 SSTPTPTAPIATLNQPPPLLRP 420
>gi|98986325 dual oxidase activator 2 [Homo sapiens]
Length = 320
Score = 32.0 bits (71), Expect = 1.9
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 309 YQRPPHSLWASLPLPLLLLA--SLCATVIIFWVAYRNEDRWAWLLQDTLGI 357
Y +P H+ S+PL +++L +L A+ ++ R RW WL++ L +
Sbjct: 11 YPQPRHAAGFSVPLLIVILVFLALAASFLLILPGIRGHSRWFWLVRVLLSL 61
>gi|117938759 GNAS complex locus XLas [Homo sapiens]
Length = 1037
Score = 32.0 bits (71), Expect = 1.9
Identities = 38/157 (24%), Positives = 53/157 (33%), Gaps = 9/157 (5%)
Query: 529 QGRAKMCGLGCAPSAGSRQKQEGAADAHTASTLERGTSRGAGDLDSNPGEDTTEIVTISE 588
+G A G PS G GAA A TA+ R D DS + + T
Sbjct: 362 EGAADAAEGGKVPSPGYGSPAAGAASADTAA---RAAPAAPADPDSGATPEDPDSGTAPA 418
Query: 589 NEATNPEDRSDSSEGWSDAHLDPN-----ELPFIPPGASEELMPLMPMAMLIPLMPLMPP 643
+ + S A DP+ + P P + P P A P P P
Sbjct: 419 DPDSGAFAADPDSGAAPAAPADPDSGAAPDAPADPDSGAAPDAPADPDAGAAPEAPAAPA 478
Query: 644 PSELGHVHAQAQAHETGLPWA-GLHKRKGLKVRKSMS 679
+E H A + G P A + +VR++ S
Sbjct: 479 AAETRAAHVAPAAPDAGAPTAPAASATRAAQVRRAAS 515
>gi|57634514 SPANX-N2 protein [Homo sapiens]
Length = 180
Score = 32.0 bits (71), Expect = 1.9
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 10/78 (12%)
Query: 550 EGAADAHTASTLERGTSRGAGDLDSNPGEDTTEIVTISENEATNPEDRS-DSSEGWS--D 606
EG++ G+S+ DLDS+ G + E + +E ++ ED DSSEG S D
Sbjct: 93 EGSSQEDEDLDSSEGSSQEDEDLDSSEG-SSQEDEDLDSSEGSSQEDEDLDSSEGSSQED 151
Query: 607 AHLDPNELPFIPPGASEE 624
LDP P G+S+E
Sbjct: 152 EDLDP------PEGSSQE 163
>gi|195972795 chemokine (C-C motif) receptor-like 2 isoform 2 [Homo
sapiens]
Length = 356
Score = 32.0 bits (71), Expect = 1.9
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 448 DIVVPGFLVA----YCCRFDVQVCSRQIYFVACTVAYAVGLLVTFMAMVLMQMGQPALLY 503
D+++ G L + C ++D Q S Q+ C+ + +G+L + ++++ + L
Sbjct: 25 DVLIEGELESDEAEQCDKYDAQALSAQLVPSLCSAVFVIGVLDNLLVVLILVKYKG--LK 82
Query: 504 LVSSTLLTSLAVAACRQELSL-FWTGQGRAKMC 535
V + L +LAV+ L+L FW G MC
Sbjct: 83 RVENIYLLNLAVSNLCFLLTLPFWAHAGGDPMC 115
>gi|68215224 chemokine (C-C motif) receptor-like 2 isoform 1 [Homo
sapiens]
Length = 344
Score = 32.0 bits (71), Expect = 1.9
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 448 DIVVPGFLVA----YCCRFDVQVCSRQIYFVACTVAYAVGLLVTFMAMVLMQMGQPALLY 503
D+++ G L + C ++D Q S Q+ C+ + +G+L + ++++ + L
Sbjct: 13 DVLIEGELESDEAEQCDKYDAQALSAQLVPSLCSAVFVIGVLDNLLVVLILVKYKG--LK 70
Query: 504 LVSSTLLTSLAVAACRQELSL-FWTGQGRAKMC 535
V + L +LAV+ L+L FW G MC
Sbjct: 71 RVENIYLLNLAVSNLCFLLTLPFWAHAGGDPMC 103
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.137 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,895,306
Number of Sequences: 37866
Number of extensions: 1323880
Number of successful extensions: 4600
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 4524
Number of HSP's gapped (non-prelim): 73
length of query: 684
length of database: 18,247,518
effective HSP length: 109
effective length of query: 575
effective length of database: 14,120,124
effective search space: 8119071300
effective search space used: 8119071300
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.