Search of human proteins with 38504671

Search of human proteins with 38504671

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|38504671 secernin 3 [Homo sapiens]
         (424 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|38504671 secernin 3 [Homo sapiens]                                 867   0.0  
gi|222537732 secernin 2 isoform 1 [Homo sapiens]                      438   e-123
gi|222537730 secernin 2 isoform 2 [Homo sapiens]                      428   e-120
gi|224465194 secernin 1 isoform a [Homo sapiens]                      418   e-117
gi|224465190 secernin 1 isoform b [Homo sapiens]                      418   e-117
gi|224465187 secernin 1 isoform a [Homo sapiens]                      418   e-117
gi|224465192 secernin 1 isoform c [Homo sapiens]                      351   8e-97
gi|253970412 G-2 and S-phase expressed 1 [Homo sapiens]                35   0.13 
gi|120953300 leucine-rich repeats and IQ motif containing 1 isof...    33   0.64 
gi|120953243 leucine-rich repeats and IQ motif containing 1 isof...    33   0.64 
gi|217272804 hyaluronan-mediated motility receptor isoform d [Ho...    32   1.1  
gi|217272802 hyaluronan-mediated motility receptor isoform a [Ho...    32   1.1  
gi|217416398 hyaluronan-mediated motility receptor isoform c [Ho...    32   1.1  
gi|217416394 hyaluronan-mediated motility receptor isoform b [Ho...    32   1.1  
gi|105990539 neurofilament, light polypeptide 68kDa [Homo sapiens]     32   1.1  
gi|112380630 leiomodin 1 (smooth muscle) [Homo sapiens]                32   1.1  
gi|197245440 hypothetical protein LOC23285 [Homo sapiens]              32   1.4  
gi|117190324 diphthine synthase isoform b [Homo sapiens]               31   1.9  
gi|117190326 diphthine synthase isoform a [Homo sapiens]               31   1.9  
gi|117190262 diphthine synthase isoform a [Homo sapiens]               31   1.9  
gi|14917119 keratin 34 [Homo sapiens]                                  30   4.1  
gi|190341065 CP110 protein [Homo sapiens]                              30   4.1  
gi|4885583 Rho-associated, coiled-coil containing protein kinase...    30   5.4  
gi|154277118 spectrin repeat containing, nuclear envelope 1 isof...    30   5.4  
gi|23097308 spectrin repeat containing, nuclear envelope 1 isofo...    30   5.4  
gi|154277116 spectrin repeat containing, nuclear envelope 1 isof...    30   5.4  
gi|47132534 STAM binding protein [Homo sapiens]                        30   5.4  
gi|42519912 STAM binding protein [Homo sapiens]                        30   5.4  
gi|5453545 STAM binding protein [Homo sapiens]                         30   5.4  
gi|10337581 type I hair keratin 3B [Homo sapiens]                      29   7.1  

>gi|38504671 secernin 3 [Homo sapiens]
          Length = 424

 Score =  867 bits (2239), Expect = 0.0
 Identities = 424/424 (100%), Positives = 424/424 (100%)

Query: 1   MEPFSCDTFVALPPATVDNRIIFGKNSDRLYDEVQEVVYFPAVVHDNLGERLKCTYIEID 60
           MEPFSCDTFVALPPATVDNRIIFGKNSDRLYDEVQEVVYFPAVVHDNLGERLKCTYIEID
Sbjct: 1   MEPFSCDTFVALPPATVDNRIIFGKNSDRLYDEVQEVVYFPAVVHDNLGERLKCTYIEID 60

Query: 61  QVPETYAVVLSRPAWLWGAEMGANEHGVCIGNEAVWGREEVCDEEALLGMDLVRLGLERA 120
           QVPETYAVVLSRPAWLWGAEMGANEHGVCIGNEAVWGREEVCDEEALLGMDLVRLGLERA
Sbjct: 61  QVPETYAVVLSRPAWLWGAEMGANEHGVCIGNEAVWGREEVCDEEALLGMDLVRLGLERA 120

Query: 121 DTAEKALNVIVDLLEKYGQGGNCTEGRMVFSYHNSFLIADRNEAWILETAGKYWAAEKVQ 180
           DTAEKALNVIVDLLEKYGQGGNCTEGRMVFSYHNSFLIADRNEAWILETAGKYWAAEKVQ
Sbjct: 121 DTAEKALNVIVDLLEKYGQGGNCTEGRMVFSYHNSFLIADRNEAWILETAGKYWAAEKVQ 180

Query: 181 EGVRNISNQLSITTKIAREHPDMRNYAKRKGWWDGKKEFDFAAAYSYLDTAKMMTSSGRY 240
           EGVRNISNQLSITTKIAREHPDMRNYAKRKGWWDGKKEFDFAAAYSYLDTAKMMTSSGRY
Sbjct: 181 EGVRNISNQLSITTKIAREHPDMRNYAKRKGWWDGKKEFDFAAAYSYLDTAKMMTSSGRY 240

Query: 241 CEGYKLLNKHKGNITFETMMEILRDKPSGINMEGEFLTTASMVSILPQDSSLPCIHFFTG 300
           CEGYKLLNKHKGNITFETMMEILRDKPSGINMEGEFLTTASMVSILPQDSSLPCIHFFTG
Sbjct: 241 CEGYKLLNKHKGNITFETMMEILRDKPSGINMEGEFLTTASMVSILPQDSSLPCIHFFTG 300

Query: 301 TPDPERSVFKPFIFVPHISQLLDTSSPTFELEDLVKKKSHFKPDRRHPLYQKHQQALEVV 360
           TPDPERSVFKPFIFVPHISQLLDTSSPTFELEDLVKKKSHFKPDRRHPLYQKHQQALEVV
Sbjct: 301 TPDPERSVFKPFIFVPHISQLLDTSSPTFELEDLVKKKSHFKPDRRHPLYQKHQQALEVV 360

Query: 361 NNNEEKAKIMLDNMRKLEKELFREMESILQNKHLDVEKIVNLFPQCTKDEIQIYQSNLSV 420
           NNNEEKAKIMLDNMRKLEKELFREMESILQNKHLDVEKIVNLFPQCTKDEIQIYQSNLSV
Sbjct: 361 NNNEEKAKIMLDNMRKLEKELFREMESILQNKHLDVEKIVNLFPQCTKDEIQIYQSNLSV 420

Query: 421 KVSS 424
           KVSS
Sbjct: 421 KVSS 424


>gi|222537732 secernin 2 isoform 1 [Homo sapiens]
          Length = 425

 Score =  438 bits (1126), Expect = e-123
 Identities = 224/417 (53%), Positives = 293/417 (70%), Gaps = 6/417 (1%)

Query: 3   PFSCDTFVALPPATVDNRIIFGKNSDRLYDEVQEVVYFPAVVHDNLGERLKCTYIEIDQV 62
           P SCD FV++PPA+    +IF KNSDR  DEVQEVV+ PA  H   G RL+CTYIE++QV
Sbjct: 9   PCSCDCFVSVPPASAIPAVIFAKNSDRPRDEVQEVVFVPAGTHTP-GSRLQCTYIEVEQV 67

Query: 63  PETYAVVLSRPAWLWGAEMGANEHGVCIGNEAVWGREEVCDEEALLGMDLVRLGLERADT 122
            +T+AV+LSRP+WLWGAEMGANEHGVCIGNEAVW +E V + EALLGMDL+RL LER+ +
Sbjct: 68  SKTHAVILSRPSWLWGAEMGANEHGVCIGNEAVWTKEPVGEGEALLGMDLLRLALERSSS 127

Query: 123 AEKALNVIVDLLEKYGQGGNCTEGRMVFSYHNSFLIADRNEAWILETAGKYWAAEKVQEG 182
           A++AL+VI  LLE YGQGGNC E    FSYH++FL+ADR EAW+LETAG+ WAA+++QEG
Sbjct: 128 AQEALHVITGLLEHYGQGGNCLEDAAPFSYHSTFLLADRTEAWVLETAGRLWAAQRIQEG 187

Query: 183 VRNISNQLSITTKIAREHPDMRNYAKRKGWWDGKKEFDFAAAYSYL-DTAKMMTSSGRYC 241
            RNISNQLSI T I+ +HP++R +A+ KGWWDG+  FDFA  +S      +M  +  R+ 
Sbjct: 188 ARNISNQLSIGTDISAQHPELRTHAQAKGWWDGQGAFDFAQIFSLTQQPVRMEAAKARFQ 247

Query: 242 EGYKLLNKHKGNITFETMMEILRDKPSGINME-GEFLTTASMVSILPQDSSLPCIHFFTG 300
            G +LL + +G IT E MM ILRDK SGI M+ G F TTASMVS+LPQD + PC+HF T 
Sbjct: 248 AGRELLRQRQGGITAEVMMGILRDKESGICMDSGGFRTTASMVSVLPQDPTQPCVHFLTA 307

Query: 301 TPDPERSVFKPFIFVPHISQLLDTSSPTFELEDLVKKKSHFKP--DRRHPLYQKHQQALE 358
           TPDP RSVFKPFIF   ++Q     SPTF  +D V+    F+   DRRH LY+ HQ AL 
Sbjct: 308 TPDPSRSVFKPFIFGMGVAQAPQVLSPTFGAQDPVRTLPRFQTQVDRRHTLYRGHQAALG 367

Query: 359 VVNNNEEKAKIMLDNMRKLEKELFREMESILQNKHL-DVEKIVNLFPQCTKDEIQIY 414
           ++  ++++ + +    + LE+E     + +L  +    + ++ +LF    K E Q Y
Sbjct: 368 LMERDQDRGQQLQQKQQDLEQEGLEATQGLLAGEWAPPLWELGSLFQAFVKRESQAY 424


>gi|222537730 secernin 2 isoform 2 [Homo sapiens]
          Length = 378

 Score =  428 bits (1101), Expect = e-120
 Identities = 214/366 (58%), Positives = 270/366 (73%), Gaps = 5/366 (1%)

Query: 3   PFSCDTFVALPPATVDNRIIFGKNSDRLYDEVQEVVYFPAVVHDNLGERLKCTYIEIDQV 62
           P SCD FV++PPA+    +IF KNSDR  DEVQEVV+ PA  H   G RL+CTYIE++QV
Sbjct: 9   PCSCDCFVSVPPASAIPAVIFAKNSDRPRDEVQEVVFVPAGTHTP-GSRLQCTYIEVEQV 67

Query: 63  PETYAVVLSRPAWLWGAEMGANEHGVCIGNEAVWGREEVCDEEALLGMDLVRLGLERADT 122
            +T+AV+LSRP+WLWGAEMGANEHGVCIGNEAVW +E V + EALLGMDL+RL LER+ +
Sbjct: 68  SKTHAVILSRPSWLWGAEMGANEHGVCIGNEAVWTKEPVGEGEALLGMDLLRLALERSSS 127

Query: 123 AEKALNVIVDLLEKYGQGGNCTEGRMVFSYHNSFLIADRNEAWILETAGKYWAAEKVQEG 182
           A++AL+VI  LLE YGQGGNC E    FSYH++FL+ADR EAW+LETAG+ WAA+++QEG
Sbjct: 128 AQEALHVITGLLEHYGQGGNCLEDAAPFSYHSTFLLADRTEAWVLETAGRLWAAQRIQEG 187

Query: 183 VRNISNQLSITTKIAREHPDMRNYAKRKGWWDGKKEFDFAAAYSYL-DTAKMMTSSGRYC 241
            RNISNQLSI T I+ +HP++R +A+ KGWWDG+  FDFA  +S      +M  +  R+ 
Sbjct: 188 ARNISNQLSIGTDISAQHPELRTHAQAKGWWDGQGAFDFAQIFSLTQQPVRMEAAKARFQ 247

Query: 242 EGYKLLNKHKGNITFETMMEILRDKPSGINME-GEFLTTASMVSILPQDSSLPCIHFFTG 300
            G +LL + +G IT E MM ILRDK SGI M+ G F TTASMVS+LPQD + PC+HF T 
Sbjct: 248 AGRELLRQRQGGITAEVMMGILRDKESGICMDSGGFRTTASMVSVLPQDPTQPCVHFLTA 307

Query: 301 TPDPERSVFKPFIFVPHISQLLDTSSPTFELEDLVKKKSHFKP--DRRHPLYQKHQQALE 358
           TPDP RSVFKPFIF   ++Q     SPTF  +D V+    F+   DRRH LY+ HQ AL 
Sbjct: 308 TPDPSRSVFKPFIFGMGVAQAPQVLSPTFGAQDPVRTLPRFQTQVDRRHTLYRGHQAALG 367

Query: 359 VVNNNE 364
           ++  ++
Sbjct: 368 LMERDQ 373


>gi|224465194 secernin 1 isoform a [Homo sapiens]
          Length = 414

 Score =  418 bits (1074), Expect = e-117
 Identities = 219/416 (52%), Positives = 289/416 (69%), Gaps = 20/416 (4%)

Query: 9   FVALPPATVDNRIIFGKNSDRLYDEVQEVVYFPAVVHDNLGERLKCTYIEIDQVPETYAV 68
           FVA PP   D  ++FGKNS R  DEVQEVVYF A  H+    +++CTYI IDQVP TYA+
Sbjct: 10  FVAFPPRAKDGLVVFGKNSARPRDEVQEVVYFSAADHEP-ESKVECTYISIDQVPRTYAI 68

Query: 69  VLSRPAWLWGAEMGANEHGVCIGNEAVWGREEVCDEEALLGMDLVRLGLERADTAEKALN 128
           ++SRPAWLWGAEMGANEHGVCI NEA+  RE   + EALLGMDLVRLGLER +TA++AL+
Sbjct: 69  MISRPAWLWGAEMGANEHGVCIANEAINTREPAAEIEALLGMDLVRLGLERGETAKEALD 128

Query: 129 VIVDLLEKYGQGGNCTE-GRMVFSYHNSFLIADRNEAWILETAGKYWAAEKVQEGVRNIS 187
           VIV LLE++GQGGN  E      S+ +++LI DR+EAW+LET GKYWAAEKV EGVR I 
Sbjct: 129 VIVSLLEEHGQGGNYFEDANSCHSFQSAYLIVDRDEAWVLETIGKYWAAEKVTEGVRCIC 188

Query: 188 NQLSITTKIAREHPDMRNYAKRKGWWDGKKEFDFAAAYS----YLDTAKMMTSSGRYCEG 243
           +QLS+TTK+  EHP++R+YA+ +GWW G+ EF+F+  +S    +LD             G
Sbjct: 189 SQLSLTTKMDAEHPELRSYAQSQGWWTGEGEFNFSEVFSPVEDHLDCG----------AG 238

Query: 244 YKLLNKHKGNITFETMMEILRDKPSGINMEGE-FLTTASMVSILPQDSSLPCIHFFTGTP 302
              L K + +IT +TMM  LRDK SG+ ++ E FLTTAS VS+LPQ+ S PCIH+FTGTP
Sbjct: 239 KDSLEKQEESITVQTMMNTLRDKASGVCIDSEFFLTTASGVSVLPQNRSSPCIHYFTGTP 298

Query: 303 DPERSVFKPFIFVPHISQLLDTSSPTFELEDLVKKKSHF--KPDRRHPLYQKHQQALEVV 360
           DP RS+FKPFIFV  +  +  T SP F  +D  KK+  F  KPDRRH LY+ H+ A  ++
Sbjct: 299 DPSRSIFKPFIFVDDVKLVPKTQSPCFGDDDPAKKEPRFQEKPDRRHELYKAHEWARAII 358

Query: 361 NNNEEKAKIMLDNMRKLEKELFREMESIL-QNKHLDVEKIVNLFPQCTKDEIQIYQ 415
            +++E+ + +   M +LEK+    ME IL  ++ LD  ++ +LF  C   EI+ ++
Sbjct: 359 ESDQEQGRKLRSTMLELEKQGLEAMEEILTSSEPLDPAEVGDLFYDCVDTEIKFFK 414


>gi|224465190 secernin 1 isoform b [Homo sapiens]
          Length = 434

 Score =  418 bits (1074), Expect = e-117
 Identities = 219/416 (52%), Positives = 289/416 (69%), Gaps = 20/416 (4%)

Query: 9   FVALPPATVDNRIIFGKNSDRLYDEVQEVVYFPAVVHDNLGERLKCTYIEIDQVPETYAV 68
           FVA PP   D  ++FGKNS R  DEVQEVVYF A  H+    +++CTYI IDQVP TYA+
Sbjct: 30  FVAFPPRAKDGLVVFGKNSARPRDEVQEVVYFSAADHEP-ESKVECTYISIDQVPRTYAI 88

Query: 69  VLSRPAWLWGAEMGANEHGVCIGNEAVWGREEVCDEEALLGMDLVRLGLERADTAEKALN 128
           ++SRPAWLWGAEMGANEHGVCI NEA+  RE   + EALLGMDLVRLGLER +TA++AL+
Sbjct: 89  MISRPAWLWGAEMGANEHGVCIANEAINTREPAAEIEALLGMDLVRLGLERGETAKEALD 148

Query: 129 VIVDLLEKYGQGGNCTE-GRMVFSYHNSFLIADRNEAWILETAGKYWAAEKVQEGVRNIS 187
           VIV LLE++GQGGN  E      S+ +++LI DR+EAW+LET GKYWAAEKV EGVR I 
Sbjct: 149 VIVSLLEEHGQGGNYFEDANSCHSFQSAYLIVDRDEAWVLETIGKYWAAEKVTEGVRCIC 208

Query: 188 NQLSITTKIAREHPDMRNYAKRKGWWDGKKEFDFAAAYS----YLDTAKMMTSSGRYCEG 243
           +QLS+TTK+  EHP++R+YA+ +GWW G+ EF+F+  +S    +LD             G
Sbjct: 209 SQLSLTTKMDAEHPELRSYAQSQGWWTGEGEFNFSEVFSPVEDHLDCG----------AG 258

Query: 244 YKLLNKHKGNITFETMMEILRDKPSGINMEGE-FLTTASMVSILPQDSSLPCIHFFTGTP 302
              L K + +IT +TMM  LRDK SG+ ++ E FLTTAS VS+LPQ+ S PCIH+FTGTP
Sbjct: 259 KDSLEKQEESITVQTMMNTLRDKASGVCIDSEFFLTTASGVSVLPQNRSSPCIHYFTGTP 318

Query: 303 DPERSVFKPFIFVPHISQLLDTSSPTFELEDLVKKKSHF--KPDRRHPLYQKHQQALEVV 360
           DP RS+FKPFIFV  +  +  T SP F  +D  KK+  F  KPDRRH LY+ H+ A  ++
Sbjct: 319 DPSRSIFKPFIFVDDVKLVPKTQSPCFGDDDPAKKEPRFQEKPDRRHELYKAHEWARAII 378

Query: 361 NNNEEKAKIMLDNMRKLEKELFREMESIL-QNKHLDVEKIVNLFPQCTKDEIQIYQ 415
            +++E+ + +   M +LEK+    ME IL  ++ LD  ++ +LF  C   EI+ ++
Sbjct: 379 ESDQEQGRKLRSTMLELEKQGLEAMEEILTSSEPLDPAEVGDLFYDCVDTEIKFFK 434


>gi|224465187 secernin 1 isoform a [Homo sapiens]
          Length = 414

 Score =  418 bits (1074), Expect = e-117
 Identities = 219/416 (52%), Positives = 289/416 (69%), Gaps = 20/416 (4%)

Query: 9   FVALPPATVDNRIIFGKNSDRLYDEVQEVVYFPAVVHDNLGERLKCTYIEIDQVPETYAV 68
           FVA PP   D  ++FGKNS R  DEVQEVVYF A  H+    +++CTYI IDQVP TYA+
Sbjct: 10  FVAFPPRAKDGLVVFGKNSARPRDEVQEVVYFSAADHEP-ESKVECTYISIDQVPRTYAI 68

Query: 69  VLSRPAWLWGAEMGANEHGVCIGNEAVWGREEVCDEEALLGMDLVRLGLERADTAEKALN 128
           ++SRPAWLWGAEMGANEHGVCI NEA+  RE   + EALLGMDLVRLGLER +TA++AL+
Sbjct: 69  MISRPAWLWGAEMGANEHGVCIANEAINTREPAAEIEALLGMDLVRLGLERGETAKEALD 128

Query: 129 VIVDLLEKYGQGGNCTE-GRMVFSYHNSFLIADRNEAWILETAGKYWAAEKVQEGVRNIS 187
           VIV LLE++GQGGN  E      S+ +++LI DR+EAW+LET GKYWAAEKV EGVR I 
Sbjct: 129 VIVSLLEEHGQGGNYFEDANSCHSFQSAYLIVDRDEAWVLETIGKYWAAEKVTEGVRCIC 188

Query: 188 NQLSITTKIAREHPDMRNYAKRKGWWDGKKEFDFAAAYS----YLDTAKMMTSSGRYCEG 243
           +QLS+TTK+  EHP++R+YA+ +GWW G+ EF+F+  +S    +LD             G
Sbjct: 189 SQLSLTTKMDAEHPELRSYAQSQGWWTGEGEFNFSEVFSPVEDHLDCG----------AG 238

Query: 244 YKLLNKHKGNITFETMMEILRDKPSGINMEGE-FLTTASMVSILPQDSSLPCIHFFTGTP 302
              L K + +IT +TMM  LRDK SG+ ++ E FLTTAS VS+LPQ+ S PCIH+FTGTP
Sbjct: 239 KDSLEKQEESITVQTMMNTLRDKASGVCIDSEFFLTTASGVSVLPQNRSSPCIHYFTGTP 298

Query: 303 DPERSVFKPFIFVPHISQLLDTSSPTFELEDLVKKKSHF--KPDRRHPLYQKHQQALEVV 360
           DP RS+FKPFIFV  +  +  T SP F  +D  KK+  F  KPDRRH LY+ H+ A  ++
Sbjct: 299 DPSRSIFKPFIFVDDVKLVPKTQSPCFGDDDPAKKEPRFQEKPDRRHELYKAHEWARAII 358

Query: 361 NNNEEKAKIMLDNMRKLEKELFREMESIL-QNKHLDVEKIVNLFPQCTKDEIQIYQ 415
            +++E+ + +   M +LEK+    ME IL  ++ LD  ++ +LF  C   EI+ ++
Sbjct: 359 ESDQEQGRKLRSTMLELEKQGLEAMEEILTSSEPLDPAEVGDLFYDCVDTEIKFFK 414


>gi|224465192 secernin 1 isoform c [Homo sapiens]
          Length = 346

 Score =  351 bits (900), Expect = 8e-97
 Identities = 184/356 (51%), Positives = 247/356 (69%), Gaps = 19/356 (5%)

Query: 69  VLSRPAWLWGAEMGANEHGVCIGNEAVWGREEVCDEEALLGMDLVRLGLERADTAEKALN 128
           ++SRPAWLWGAEMGANEHGVCI NEA+  RE   + EALLGMDLVRLGLER +TA++AL+
Sbjct: 1   MISRPAWLWGAEMGANEHGVCIANEAINTREPAAEIEALLGMDLVRLGLERGETAKEALD 60

Query: 129 VIVDLLEKYGQGGNCTE-GRMVFSYHNSFLIADRNEAWILETAGKYWAAEKVQEGVRNIS 187
           VIV LLE++GQGGN  E      S+ +++LI DR+EAW+LET GKYWAAEKV EGVR I 
Sbjct: 61  VIVSLLEEHGQGGNYFEDANSCHSFQSAYLIVDRDEAWVLETIGKYWAAEKVTEGVRCIC 120

Query: 188 NQLSITTKIAREHPDMRNYAKRKGWWDGKKEFDFAAAYS----YLDTAKMMTSSGRYCEG 243
           +QLS+TTK+  EHP++R+YA+ +GWW G+ EF+F+  +S    +LD             G
Sbjct: 121 SQLSLTTKMDAEHPELRSYAQSQGWWTGEGEFNFSEVFSPVEDHLDCG----------AG 170

Query: 244 YKLLNKHKGNITFETMMEILRDKPSGINMEGE-FLTTASMVSILPQDSSLPCIHFFTGTP 302
              L K + +IT +TMM  LRDK SG+ ++ E FLTTAS VS+LPQ+ S PCIH+FTGTP
Sbjct: 171 KDSLEKQEESITVQTMMNTLRDKASGVCIDSEFFLTTASGVSVLPQNRSSPCIHYFTGTP 230

Query: 303 DPERSVFKPFIFVPHISQLLDTSSPTFELEDLVKKKSHF--KPDRRHPLYQKHQQALEVV 360
           DP RS+FKPFIFV  +  +  T SP F  +D  KK+  F  KPDRRH LY+ H+ A  ++
Sbjct: 231 DPSRSIFKPFIFVDDVKLVPKTQSPCFGDDDPAKKEPRFQEKPDRRHELYKAHEWARAII 290

Query: 361 NNNEEKAKIMLDNMRKLEKELFREMESIL-QNKHLDVEKIVNLFPQCTKDEIQIYQ 415
            +++E+ + +   M +LEK+    ME IL  ++ LD  ++ +LF  C   EI+ ++
Sbjct: 291 ESDQEQGRKLRSTMLELEKQGLEAMEEILTSSEPLDPAEVGDLFYDCVDTEIKFFK 346


>gi|253970412 G-2 and S-phase expressed 1 [Homo sapiens]
          Length = 739

 Score = 35.0 bits (79), Expect = 0.13
 Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 3/53 (5%)

Query: 291 SLPCIHFFTGTPDPERSVFKPFIFVPHISQLLDTSSPTFELEDLVKKKSHFKP 343
           S P I   T TPD  ++V KP    P + QL+D SSP  +L     K++   P
Sbjct: 686 SRPLIDLMTNTPDMNKNVAKPS---PVVGQLIDLSSPLIQLSPEADKENVDSP 735


>gi|120953300 leucine-rich repeats and IQ motif containing 1 isoform
           1 [Homo sapiens]
          Length = 1722

 Score = 32.7 bits (73), Expect = 0.64
 Identities = 27/113 (23%), Positives = 50/113 (44%), Gaps = 18/113 (15%)

Query: 330 ELEDLVKKKSHFKPDRRHPLYQKHQQALEVVNNNEEKAKIMLDNMRKLE----------- 378
           ELED  K+    + DR    +Q+ ++         +  K  L+N++K E           
Sbjct: 180 ELEDKEKQTLKAQRDREEKQFQEEEEKRHCWMKQFKVEKKKLENIQKQEQDKMNDELYKE 239

Query: 379 ----KELFREMESILQNKHLDVEKIVNLF---PQCTKDEIQIYQSNLSVKVSS 424
               KE F++ E  ++N HL +E+    F    +  K+ +   Q+N +VK+ +
Sbjct: 240 EKIWKEKFKQHEEYIRNLHLQMEEERTRFKDQQEKEKNSLLKQQNNAAVKIQA 292


>gi|120953243 leucine-rich repeats and IQ motif containing 1 isoform
           2 [Homo sapiens]
          Length = 1336

 Score = 32.7 bits (73), Expect = 0.64
 Identities = 27/113 (23%), Positives = 50/113 (44%), Gaps = 18/113 (15%)

Query: 330 ELEDLVKKKSHFKPDRRHPLYQKHQQALEVVNNNEEKAKIMLDNMRKLE----------- 378
           ELED  K+    + DR    +Q+ ++         +  K  L+N++K E           
Sbjct: 180 ELEDKEKQTLKAQRDREEKQFQEEEEKRHCWMKQFKVEKKKLENIQKQEQDKMNDELYKE 239

Query: 379 ----KELFREMESILQNKHLDVEKIVNLF---PQCTKDEIQIYQSNLSVKVSS 424
               KE F++ E  ++N HL +E+    F    +  K+ +   Q+N +VK+ +
Sbjct: 240 EKIWKEKFKQHEEYIRNLHLQMEEERTRFKDQQEKEKNSLLKQQNNAAVKIQA 292


>gi|217272804 hyaluronan-mediated motility receptor isoform d [Homo
           sapiens]
          Length = 638

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 6/56 (10%)

Query: 332 EDLVKKKSHFKP------DRRHPLYQKHQQALEVVNNNEEKAKIMLDNMRKLEKEL 381
           E++VK+K+ F+       D    L QK +QA  +V   EE+AK   + ++ LE++L
Sbjct: 279 EEMVKEKNLFEEELKQTLDELDKLQQKEEQAERLVKQLEEEAKSRAEELKLLEEKL 334


>gi|217272802 hyaluronan-mediated motility receptor isoform a [Homo
           sapiens]
          Length = 725

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 6/56 (10%)

Query: 332 EDLVKKKSHFKP------DRRHPLYQKHQQALEVVNNNEEKAKIMLDNMRKLEKEL 381
           E++VK+K+ F+       D    L QK +QA  +V   EE+AK   + ++ LE++L
Sbjct: 366 EEMVKEKNLFEEELKQTLDELDKLQQKEEQAERLVKQLEEEAKSRAEELKLLEEKL 421


>gi|217416398 hyaluronan-mediated motility receptor isoform c [Homo
           sapiens]
          Length = 709

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 6/56 (10%)

Query: 332 EDLVKKKSHFKP------DRRHPLYQKHQQALEVVNNNEEKAKIMLDNMRKLEKEL 381
           E++VK+K+ F+       D    L QK +QA  +V   EE+AK   + ++ LE++L
Sbjct: 350 EEMVKEKNLFEEELKQTLDELDKLQQKEEQAERLVKQLEEEAKSRAEELKLLEEKL 405


>gi|217416394 hyaluronan-mediated motility receptor isoform b [Homo
           sapiens]
          Length = 724

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 6/56 (10%)

Query: 332 EDLVKKKSHFKP------DRRHPLYQKHQQALEVVNNNEEKAKIMLDNMRKLEKEL 381
           E++VK+K+ F+       D    L QK +QA  +V   EE+AK   + ++ LE++L
Sbjct: 365 EEMVKEKNLFEEELKQTLDELDKLQQKEEQAERLVKQLEEEAKSRAEELKLLEEKL 420


>gi|105990539 neurofilament, light polypeptide 68kDa [Homo sapiens]
          Length = 543

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 23/105 (21%), Positives = 46/105 (43%), Gaps = 2/105 (1%)

Query: 322 LDTSSPTFELEDLVKKKSHFKPDRRHPLYQKHQQALEVVNNNEEKAKIMLDNMRKLEKEL 381
           L+  +   E E LV ++ H +P R   LY++  + L +   +    K  L   R+  +E 
Sbjct: 111 LEQQNKVLEAELLVLRQKHSEPSRFRALYEQEIRDLRLAAEDATNEKQALQGEREGLEET 170

Query: 382 FREMESILQNKHLDVEKIVNLFPQCTK--DEIQIYQSNLSVKVSS 424
            R +++  + + L  E       +  K  DE  + ++ L  ++ S
Sbjct: 171 LRNLQARYEEEVLSREDAEGRLMEARKGADEAALARAELEKRIDS 215


>gi|112380630 leiomodin 1 (smooth muscle) [Homo sapiens]
          Length = 600

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 1/82 (1%)

Query: 316 PHISQLLDTSSPTFELEDLVKKKSHFKPDRRHPLYQKHQQALEVVNNNEEKAKIMLDNMR 375
           P I  LL+T SP  E+E+L K+     PD   P+  + +   E  +      + ML+   
Sbjct: 15  PDIDSLLETLSPE-EMEELEKELDVVDPDGSVPVGLRQRNQTEKQSTGVYNREAMLNFCE 73

Query: 376 KLEKELFREMESILQNKHLDVE 397
           K  K+L +   S+ ++K ++ +
Sbjct: 74  KETKKLMQREMSMDESKQVETK 95


>gi|197245440 hypothetical protein LOC23285 [Homo sapiens]
          Length = 1354

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 18/77 (23%)

Query: 330 ELEDLVKKKSHFKPDRRHPLYQKHQQALEVVNNNEEKAKIMLD--NMRKLEKELFREMES 387
           E+ D    +S  +PD + PL            N++EK K+ L+  N+ KL+K L  E+ES
Sbjct: 559 EISDAEALQSSCRPDPQKPL------------NDQEKEKLALECQNISKLDKSLKHELES 606

Query: 388 ILQNKHLDVEKIVNLFP 404
               K + ++K    FP
Sbjct: 607 ----KQICLDKSETKFP 619


>gi|117190324 diphthine synthase isoform b [Homo sapiens]
          Length = 284

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 17/46 (36%), Positives = 24/46 (52%)

Query: 317 HISQLLDTSSPTFELEDLVKKKSHFKPDRRHPLYQKHQQALEVVNN 362
           H   LLD       LE+L+K +  ++P R   + Q  QQ LE+V N
Sbjct: 158 HTLCLLDIKVKEQSLENLIKGRKIYEPPRYMSVNQAAQQLLEIVQN 203


>gi|117190326 diphthine synthase isoform a [Homo sapiens]
          Length = 285

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 17/46 (36%), Positives = 24/46 (52%)

Query: 317 HISQLLDTSSPTFELEDLVKKKSHFKPDRRHPLYQKHQQALEVVNN 362
           H   LLD       LE+L+K +  ++P R   + Q  QQ LE+V N
Sbjct: 158 HTLCLLDIKVKEQSLENLIKGRKIYEPPRYMSVNQAAQQLLEIVQN 203


>gi|117190262 diphthine synthase isoform a [Homo sapiens]
          Length = 285

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 17/46 (36%), Positives = 24/46 (52%)

Query: 317 HISQLLDTSSPTFELEDLVKKKSHFKPDRRHPLYQKHQQALEVVNN 362
           H   LLD       LE+L+K +  ++P R   + Q  QQ LE+V N
Sbjct: 158 HTLCLLDIKVKEQSLENLIKGRKIYEPPRYMSVNQAAQQLLEIVQN 203


>gi|14917119 keratin 34 [Homo sapiens]
          Length = 436

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 7/101 (6%)

Query: 330 ELEDLVKKKSHFKPDRRHPLYQKHQQALE-----VVNNNEEKAKIMLD-NMRKLEKELFR 383
           ELE L++++S  +     P YQ + + +E     ++    E A+++++ +  KL  + FR
Sbjct: 125 ELEKLIQERSQQQEPLLCPSYQSYFKTIEELQQKILCAKAENARLVVNIDNAKLASDDFR 184

Query: 384 EMESILQNKHLDVEKIVNLFPQCTKDEIQIYQSNLSVKVSS 424
                 Q+  L VE  +N   +   DE+ + +S+L  +V S
Sbjct: 185 SKYQTEQSLRLLVESDINSIRRIL-DELTLCKSDLESQVES 224


>gi|190341065 CP110 protein [Homo sapiens]
          Length = 991

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 4/100 (4%)

Query: 304 PERSVFKPFIFVPHISQLLDTSSPTFELEDLVKKKSHFKPDRRHPLYQKHQQALEVVNNN 363
           PE+   K   FV + +++L TSS   E E+L+K K     + R  L ++H Q L ++   
Sbjct: 617 PEKRYPKGSGFV-NKNKMLGTSSK--ESEELLKSKMLAFEEMRKRLEEQHAQQLSLLIAE 673

Query: 364 EEKAKIMLDNMRKLEKELFREMESI-LQNKHLDVEKIVNL 402
           +E+ +  L    + ++++ +E +++  +   LD+   V L
Sbjct: 674 QEREQERLQKEIEEQEKMLKEKKAMTAEASELDINNAVEL 713


>gi|4885583 Rho-associated, coiled-coil containing protein kinase 1
           [Homo sapiens]
          Length = 1354

 Score = 29.6 bits (65), Expect = 5.4
 Identities = 21/94 (22%), Positives = 46/94 (48%), Gaps = 2/94 (2%)

Query: 322 LDTSSPTFELEDLVKKKSHFKPDRRHPLYQKHQQALE--VVNNNEEKAKIMLDNMRKLEK 379
           +D      +LE L   K   + + ++   Q  Q++ +  ++ N  +      DN++ LEK
Sbjct: 746 VDLKQSQQKLEHLTGNKERMEDEVKNLTLQLEQESNKRLLLQNELKTQAFEADNLKGLEK 805

Query: 380 ELFREMESILQNKHLDVEKIVNLFPQCTKDEIQI 413
           ++ +E+ ++L+ K L   ++  L  Q   +E Q+
Sbjct: 806 QMKQEINTLLEAKRLLEFELAQLTKQYRGNEGQM 839


>gi|154277118 spectrin repeat containing, nuclear envelope 1 isoform 4
            [Homo sapiens]
          Length = 3321

 Score = 29.6 bits (65), Expect = 5.4
 Identities = 15/57 (26%), Positives = 29/57 (50%)

Query: 359  VVNNNEEKAKIMLDNMRKLEKELFREMESILQNKHLDVEKIVNLFPQCTKDEIQIYQ 415
            VVN    + K  L  +   + +L     S+  NK++ ++K+ N+F Q   ++I+  Q
Sbjct: 995  VVNQRCHQMKERLQQILNFQNDLKVLFTSLADNKYIILQKLANVFEQPVAEQIEAIQ 1051


>gi|23097308 spectrin repeat containing, nuclear envelope 1 isoform 2
            [Homo sapiens]
          Length = 8749

 Score = 29.6 bits (65), Expect = 5.4
 Identities = 15/57 (26%), Positives = 29/57 (50%)

Query: 359  VVNNNEEKAKIMLDNMRKLEKELFREMESILQNKHLDVEKIVNLFPQCTKDEIQIYQ 415
            VVN    + K  L  +   + +L     S+  NK++ ++K+ N+F Q   ++I+  Q
Sbjct: 6400 VVNQRCHQMKERLQQILNFQNDLKVLFTSLADNKYIILQKLANVFEQPVAEQIEAIQ 6456


>gi|154277116 spectrin repeat containing, nuclear envelope 1 isoform 1
            [Homo sapiens]
          Length = 8797

 Score = 29.6 bits (65), Expect = 5.4
 Identities = 15/57 (26%), Positives = 29/57 (50%)

Query: 359  VVNNNEEKAKIMLDNMRKLEKELFREMESILQNKHLDVEKIVNLFPQCTKDEIQIYQ 415
            VVN    + K  L  +   + +L     S+  NK++ ++K+ N+F Q   ++I+  Q
Sbjct: 6471 VVNQRCHQMKERLQQILNFQNDLKVLFTSLADNKYIILQKLANVFEQPVAEQIEAIQ 6527


>gi|47132534 STAM binding protein [Homo sapiens]
          Length = 424

 Score = 29.6 bits (65), Expect = 5.4
 Identities = 14/56 (25%), Positives = 31/56 (55%), Gaps = 7/56 (12%)

Query: 351 QKHQQALEVVNN-------NEEKAKIMLDNMRKLEKELFREMESILQNKHLDVEKI 399
           +K ++A E+  N        +EK ++     ++LE+E F   E +++N+ L+ E++
Sbjct: 124 EKKKEAEELARNMAIQQELEKEKQRVAQQKQQQLEQEQFHAFEEMIRNQELEKERL 179


>gi|42519912 STAM binding protein [Homo sapiens]
          Length = 424

 Score = 29.6 bits (65), Expect = 5.4
 Identities = 14/56 (25%), Positives = 31/56 (55%), Gaps = 7/56 (12%)

Query: 351 QKHQQALEVVNN-------NEEKAKIMLDNMRKLEKELFREMESILQNKHLDVEKI 399
           +K ++A E+  N        +EK ++     ++LE+E F   E +++N+ L+ E++
Sbjct: 124 EKKKEAEELARNMAIQQELEKEKQRVAQQKQQQLEQEQFHAFEEMIRNQELEKERL 179


>gi|5453545 STAM binding protein [Homo sapiens]
          Length = 424

 Score = 29.6 bits (65), Expect = 5.4
 Identities = 14/56 (25%), Positives = 31/56 (55%), Gaps = 7/56 (12%)

Query: 351 QKHQQALEVVNN-------NEEKAKIMLDNMRKLEKELFREMESILQNKHLDVEKI 399
           +K ++A E+  N        +EK ++     ++LE+E F   E +++N+ L+ E++
Sbjct: 124 EKKKEAEELARNMAIQQELEKEKQRVAQQKQQQLEQEQFHAFEEMIRNQELEKERL 179


>gi|10337581 type I hair keratin 3B [Homo sapiens]
          Length = 404

 Score = 29.3 bits (64), Expect = 7.1
 Identities = 26/102 (25%), Positives = 51/102 (50%), Gaps = 9/102 (8%)

Query: 330 ELEDLVKKKSHFKPDRRHPLYQKHQQALE-----VVNNNEEKAK--IMLDNMRKLEKELF 382
           ELE+L++++S  +     P YQ + + +E     ++ +  E A+  + +DN  KL  + F
Sbjct: 83  ELENLIRERSQQQEPLLCPSYQSYFKTIEELQQKILCSKSENARLVVQIDN-AKLAADDF 141

Query: 383 REMESILQNKHLDVEKIVNLFPQCTKDEIQIYQSNLSVKVSS 424
           R      Q+    VE  +N   +   DE+ + +S+L  ++ S
Sbjct: 142 RTKYQTEQSLRQLVESDINSLRRIL-DELTLCRSDLEAQMES 182


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.135    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,734,114
Number of Sequences: 37866
Number of extensions: 694744
Number of successful extensions: 2142
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 2070
Number of HSP's gapped (non-prelim): 72
length of query: 424
length of database: 18,247,518
effective HSP length: 105
effective length of query: 319
effective length of database: 14,271,588
effective search space: 4552636572
effective search space used: 4552636572
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.