SCRN1 14872

Name: SCRN1	Sequence: fasta or formatted (414aa)		NCBI GI: 224465187
Description: secernin 1 isoform a		Referenced in: Additional Brain Proteins
Other entries for this name: alt prot [434aa] secernin 1 isoform b alt prot [346aa] secernin 1 isoform c alt mRNA [414aa] secernin 1 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.5 35 3 C cysteine 2.7 11 1 D aspartate 6.5 27 3 E glutamate 10.9 45 2 F phenylalanine 4.8 20 2 G glycine 6.0 25 2 H histidine 2.2 9 1 I isoleucine 4.8 20 2 K lysine 5.1 21 2 L leucine 7.0 29 2 M methionine 2.2 9 2 N asparagine 2.2 9 1 P proline 5.6 23 2 Q glutamine 3.6 15 1 R arginine 4.8 20 2 S serine 7.5 31 2 T threonine 4.8 20 2 V valine 6.5 27 2 W tryptophan 1.7 7 2 Y tyrosine 2.7 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 secernin 1 isoform a SCRN1 1.000 secernin 1 isoform a SCRN1 1.000 secernin 1 isoform b SCRN1 0.832 secernin 1 isoform c SCRN2 0.493 secernin 2 isoform 1 SCRN3 0.478 secernin 3 SCRN2 0.465 secernin 2 isoform 2 ABTB2 0.009 ankyrin repeat and BTB (POZ) domain containing 2 [Ho... PER1 0.009 period 1 NBPF1 0.009 hypothetical protein LOC55672 PDXDC1 0.009 pyridoxal-dependent decarboxylase domain containing... RRBP1 0.007 ribosome binding protein 1 RRBP1 0.007 ribosome binding protein 1 BZRAP1 0.007 peripheral benzodiazepine receptor-associated prote... BZRAP1 0.007 peripheral benzodiazepine receptor-associated prote... USP11 0.006 ubiquitin specific peptidase 11 ADPGK 0.006 ADP-dependent glucokinase RAD50 0.005 RAD50 homolog isoform 2 RAD50 0.005 RAD50 homolog isoform 1 MRPL37 0.005 mitochondrial ribosomal protein L37 NBPF10 0.005 hypothetical protein LOC100132406 ITGB4 0.005 integrin beta 4 isoform 2 precursor ITGB4 0.005 integrin beta 4 isoform 1 precursor ITGB4 0.005 integrin beta 4 isoform 3 precursor CCDC113 0.005 coiled-coil domain containing 113 isoform 2 NBPF14 0.005 hypothetical protein LOC25832 C6orf103 0.005 hypothetical protein LOC79747 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.