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Search of human proteins with 125346184
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|125346184 hypothetical protein LOC400823 [Homo sapiens]
(158 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|125346184 hypothetical protein LOC400823 [Homo sapiens] 323 4e-89
gi|118498366 hypothetical protein LOC283635 isoform 2 [Homo sapi... 120 5e-28
gi|118498371 hypothetical protein LOC283635 isoform 1 [Homo sapi... 120 5e-28
gi|239742355 PREDICTED: hypothetical protein XP_002342499 [Homo ... 45 2e-05
gi|45359873 OGT(O-Glc-NAc transferase)-interacting protein 106 K... 35 0.035
gi|155722990 solute carrier family 4 (anion exchanger), member 1... 32 0.23
gi|4759128 solute carrier family 24 (sodium/potassium/calcium ex... 32 0.29
gi|60498973 myelin transcription factor 1-like [Homo sapiens] 31 0.38
gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens] 31 0.50
gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens] 31 0.50
gi|239755020 PREDICTED: similar to solute carrier family 4 (anio... 31 0.50
gi|239749546 PREDICTED: similar to solute carrier family 4 (anio... 31 0.50
gi|239743698 PREDICTED: hypothetical protein XP_002342928 [Homo ... 31 0.50
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens] 31 0.50
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)... 31 0.50
gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isof... 31 0.50
gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isof... 31 0.50
gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isof... 31 0.50
gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isof... 31 0.50
gi|16332360 cell division cycle 2-like 1 (PITSLRE proteins) isof... 31 0.50
gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isof... 31 0.50
gi|17975763 myelin transcription factor 1 [Homo sapiens] 30 0.86
gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens] 30 0.86
gi|192807284 zinc finger and BTB domain containing 4 [Homo sapiens] 30 0.86
gi|154759293 cysteine-rich hydrophobic domain 1 [Homo sapiens] 30 0.86
gi|4503257 death-domain associated protein isoform a [Homo sapiens] 30 1.1
gi|215422388 death-domain associated protein isoform a [Homo sap... 30 1.1
gi|215422366 death-domain associated protein isoform b [Homo sap... 30 1.1
gi|224809302 xeroderma pigmentosum, complementation group C isof... 30 1.1
gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens] 30 1.1
>gi|125346184 hypothetical protein LOC400823 [Homo sapiens]
Length = 158
Score = 323 bits (828), Expect = 4e-89
Identities = 158/158 (100%), Positives = 158/158 (100%)
Query: 1 MEIDGFQQLDLEKSVPSKKTTPKRIIHFVDGDIMEEYSTEEEEEEEKEEQSTNSTLDPSK 60
MEIDGFQQLDLEKSVPSKKTTPKRIIHFVDGDIMEEYSTEEEEEEEKEEQSTNSTLDPSK
Sbjct: 1 MEIDGFQQLDLEKSVPSKKTTPKRIIHFVDGDIMEEYSTEEEEEEEKEEQSTNSTLDPSK 60
Query: 61 LSWGPYLRFWAGRIASTSFSTCEFLGGRFAVFFGLTQPKYQYVLNEFYRIQNKKSDNKSE 120
LSWGPYLRFWAGRIASTSFSTCEFLGGRFAVFFGLTQPKYQYVLNEFYRIQNKKSDNKSE
Sbjct: 61 LSWGPYLRFWAGRIASTSFSTCEFLGGRFAVFFGLTQPKYQYVLNEFYRIQNKKSDNKSE 120
Query: 121 RRGSKAQAAEVPNEKCHLEAGVQEYGTIQQDVTEAIPQ 158
RRGSKAQAAEVPNEKCHLEAGVQEYGTIQQDVTEAIPQ
Sbjct: 121 RRGSKAQAAEVPNEKCHLEAGVQEYGTIQQDVTEAIPQ 158
>gi|118498366 hypothetical protein LOC283635 isoform 2 [Homo
sapiens]
Length = 213
Score = 120 bits (301), Expect = 5e-28
Identities = 55/139 (39%), Positives = 91/139 (65%), Gaps = 1/139 (0%)
Query: 5 GFQQLDLEKSVPSKKTTPKRIIHFVDGDIMEEYSTEEEEEEEKEEQSTNSTLDPSKLSWG 64
GF+ ++L + KK P+R+IHFV G+ MEEYST+E+E + E++ T+DP+KL+WG
Sbjct: 38 GFENVELGV-IGKKKKVPRRVIHFVSGETMEEYSTDEDEVDGLEKKDVLPTVDPTKLTWG 96
Query: 65 PYLRFWAGRIASTSFSTCEFLGGRFAVFFGLTQPKYQYVLNEFYRIQNKKSDNKSERRGS 124
PYL F+ R A+++ S C+FLG + A G++ PKYQY ++E+YR++ ++ + + E R S
Sbjct: 97 PYLWFYMLRAATSTLSVCDFLGEKIASVLGISTPKYQYAIDEYYRMKKEEEEEEEENRMS 156
Query: 125 KAQAAEVPNEKCHLEAGVQ 143
+ + K ++ VQ
Sbjct: 157 EEAEKQYQQNKLQTDSIVQ 175
>gi|118498371 hypothetical protein LOC283635 isoform 1 [Homo
sapiens]
Length = 236
Score = 120 bits (301), Expect = 5e-28
Identities = 55/139 (39%), Positives = 91/139 (65%), Gaps = 1/139 (0%)
Query: 5 GFQQLDLEKSVPSKKTTPKRIIHFVDGDIMEEYSTEEEEEEEKEEQSTNSTLDPSKLSWG 64
GF+ ++L + KK P+R+IHFV G+ MEEYST+E+E + E++ T+DP+KL+WG
Sbjct: 61 GFENVELGV-IGKKKKVPRRVIHFVSGETMEEYSTDEDEVDGLEKKDVLPTVDPTKLTWG 119
Query: 65 PYLRFWAGRIASTSFSTCEFLGGRFAVFFGLTQPKYQYVLNEFYRIQNKKSDNKSERRGS 124
PYL F+ R A+++ S C+FLG + A G++ PKYQY ++E+YR++ ++ + + E R S
Sbjct: 120 PYLWFYMLRAATSTLSVCDFLGEKIASVLGISTPKYQYAIDEYYRMKKEEEEEEEENRMS 179
Query: 125 KAQAAEVPNEKCHLEAGVQ 143
+ + K ++ VQ
Sbjct: 180 EEAEKQYQQNKLQTDSIVQ 198
>gi|239742355 PREDICTED: hypothetical protein XP_002342499 [Homo
sapiens]
Length = 137
Score = 45.4 bits (106), Expect = 2e-05
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 5 GFQQLDLEKSVPSKKTTPKRIIHFVDGDIMEEYSTEEEEEEEKEEQSTNSTLDPSK 60
GF+ ++L + KK P+R I FV D M+EYST+E+E + E + TLDP +
Sbjct: 6 GFENVELGV-IQGKKKVPRRAILFVSDDTMKEYSTDEDEVDGLERKDVLPTLDPEE 60
>gi|45359873 OGT(O-Glc-NAc transferase)-interacting protein 106 KDa
isoform 2 [Homo sapiens]
Length = 686
Score = 34.7 bits (78), Expect = 0.035
Identities = 23/50 (46%), Positives = 28/50 (56%), Gaps = 7/50 (14%)
Query: 38 STEEEEEEEKEEQS-TNSTLDPSKLSWGPYLRFWA------GRIASTSFS 80
+TEEEEEEE+EE S +T+ P L+ P FWA G I S S S
Sbjct: 629 ATEEEEEEEEEEGSGEGTTISPVNLAPFPEAEFWAILTSVPGTIRSGSLS 678
>gi|155722990 solute carrier family 4 (anion exchanger), member 1,
adaptor protein [Homo sapiens]
Length = 796
Score = 32.0 bits (71), Expect = 0.23
Identities = 16/50 (32%), Positives = 25/50 (50%)
Query: 13 KSVPSKKTTPKRIIHFVDGDIMEEYSTEEEEEEEKEEQSTNSTLDPSKLS 62
K P + P ++ D +EE EEEEEE+++E+ L+ LS
Sbjct: 626 KLPPKRPELPPTLMRMKDEPEVEEEEEEEEEEEKEKEEHEKKKLEDGSLS 675
>gi|4759128 solute carrier family 24 (sodium/potassium/calcium
exchanger), member 1 [Homo sapiens]
Length = 1099
Score = 31.6 bits (70), Expect = 0.29
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 35 EEYSTEEEEEEEKEEQSTNSTLDPSKLSW 63
EE +EEEEEE+EE+ +P L W
Sbjct: 873 EEEEEQEEEEEEEEEEEEKGNEEPLSLDW 901
Score = 27.7 bits (60), Expect = 4.3
Identities = 12/20 (60%), Positives = 15/20 (75%)
Query: 31 GDIMEEYSTEEEEEEEKEEQ 50
GD EE EEE+EEE+EE+
Sbjct: 857 GDSEEEEEEEEEQEEEEEEE 876
Score = 27.3 bits (59), Expect = 5.6
Identities = 12/21 (57%), Positives = 15/21 (71%)
Query: 30 DGDIMEEYSTEEEEEEEKEEQ 50
DG EE EEEE+EE+EE+
Sbjct: 855 DGGDSEEEEEEEEEQEEEEEE 875
Score = 26.9 bits (58), Expect = 7.3
Identities = 12/21 (57%), Positives = 15/21 (71%)
Query: 30 DGDIMEEYSTEEEEEEEKEEQ 50
D + EE E+EEEEE+EEQ
Sbjct: 858 DSEEEEEEEEEQEEEEEEEEQ 878
Score = 26.9 bits (58), Expect = 7.3
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 35 EEYSTEEEEEEEKEEQSTNSTLDPSKLSWGPYLRFW 70
EE EEEEEEE+EE+ + K + P W
Sbjct: 866 EEEQEEEEEEEEQEEEEEEEEEEEEKGNEEPLSLDW 901
>gi|60498973 myelin transcription factor 1-like [Homo sapiens]
Length = 1184
Score = 31.2 bits (69), Expect = 0.38
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 30 DGDIMEEYSTEEEEEEEKEEQSTN 53
DG+ +E+ EEEEEEE+EE+ N
Sbjct: 145 DGEDVEDEEEEEEEEEEEEEEEEN 168
Score = 26.6 bits (57), Expect = 9.5
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 35 EEYSTEEEEEEEKEEQSTNSTLD 57
EE EEEEEEE+EE++ + ++
Sbjct: 152 EEEEEEEEEEEEEEEENEDHQMN 174
>gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens]
Length = 770
Score = 30.8 bits (68), Expect = 0.50
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 30 DGDIMEEYSTEEEEEEEKEEQSTNSTLDPSKLS 62
+G EE EEEEEEE+EE++ +++ + S+ S
Sbjct: 291 EGSTSEESEEEEEEEEEEEEETGSNSEEASEQS 323
Score = 28.1 bits (61), Expect = 3.3
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 39 TEEEEEEEKEEQSTNSTLDPSK 60
+EEEEEEE+EE+ ST + S+
Sbjct: 278 SEEEEEEEEEEEEEGSTSEESE 299
>gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens]
Length = 780
Score = 30.8 bits (68), Expect = 0.50
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 30 DGDIMEEYSTEEEEEEEKEEQSTNSTLDPSKLS 62
+G EE EEEEEEE+EE++ +++ + S+ S
Sbjct: 301 EGSTSEESEEEEEEEEEEEEETGSNSEEASEQS 333
Score = 28.1 bits (61), Expect = 3.3
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 39 TEEEEEEEKEEQSTNSTLDPSK 60
+EEEEEEE+EE+ ST + S+
Sbjct: 288 SEEEEEEEEEEEEEGSTSEESE 309
>gi|239755020 PREDICTED: similar to solute carrier family 4 (anion
exchanger), member 1, adaptor protein [Homo sapiens]
Length = 210
Score = 30.8 bits (68), Expect = 0.50
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 13 KSVPSKKTTPKRIIHFVDGDIMEEYSTEEEEEEEKEEQSTNSTLDPSKLS 62
K P P ++ D +EE EEEEEE+++E+ L+ LS
Sbjct: 16 KLPPKHPELPPTLMRMKDEPEVEEEEEEEEEEEKEKEEHEKKKLEDGSLS 65
Score = 27.7 bits (60), Expect = 4.3
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 35 EEYSTEEEEEEEKEEQSTNSTLDPSKLSWGPYLR 68
+E EEEEEEE+EE+ + KL G R
Sbjct: 33 DEPEVEEEEEEEEEEEKEKEEHEKKKLEDGSLSR 66
>gi|239749546 PREDICTED: similar to solute carrier family 4 (anion
exchanger), member 1, adaptor protein [Homo sapiens]
Length = 210
Score = 30.8 bits (68), Expect = 0.50
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 13 KSVPSKKTTPKRIIHFVDGDIMEEYSTEEEEEEEKEEQSTNSTLDPSKLS 62
K P P ++ D +EE EEEEEE+++E+ L+ LS
Sbjct: 16 KLPPKHPELPPTLMRMKDEPEVEEEEEEEEEEEKEKEEHEKKKLEDGSLS 65
Score = 27.7 bits (60), Expect = 4.3
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 35 EEYSTEEEEEEEKEEQSTNSTLDPSKLSWGPYLR 68
+E EEEEEEE+EE+ + KL G R
Sbjct: 33 DEPEVEEEEEEEEEEEKEKEEHEKKKLEDGSLSR 66
>gi|239743698 PREDICTED: hypothetical protein XP_002342928 [Homo
sapiens]
Length = 210
Score = 30.8 bits (68), Expect = 0.50
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 13 KSVPSKKTTPKRIIHFVDGDIMEEYSTEEEEEEEKEEQSTNSTLDPSKLS 62
K P P ++ D +EE EEEEEE+++E+ L+ LS
Sbjct: 16 KLPPKHPELPPTLMRMKDEPEVEEEEEEEEEEEKEKEEHEKKKLEDGSLS 65
Score = 27.7 bits (60), Expect = 4.3
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 35 EEYSTEEEEEEEKEEQSTNSTLDPSKLSWGPYLR 68
+E EEEEEEE+EE+ + KL G R
Sbjct: 33 DEPEVEEEEEEEEEEEKEKEEHEKKKLEDGSLSR 66
>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
Length = 1312
Score = 30.8 bits (68), Expect = 0.50
Identities = 19/44 (43%), Positives = 22/44 (50%)
Query: 35 EEYSTEEEEEEEKEEQSTNSTLDPSKLSWGPYLRFWAGRIASTS 78
EE EEEEEEE+EEQ +T S + P AG A S
Sbjct: 1025 EEEEEEEEEEEEEEEQQPATTTATSTAAAAPSTAPSAGSTAGDS 1068
Score = 27.3 bits (59), Expect = 5.6
Identities = 13/22 (59%), Positives = 15/22 (68%)
Query: 29 VDGDIMEEYSTEEEEEEEKEEQ 50
V G EE EEEEEEE+EE+
Sbjct: 1017 VRGGAEEEEEEEEEEEEEEEEE 1038
Score = 26.9 bits (58), Expect = 7.3
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 35 EEYSTEEEEEEEKEEQSTNSTLDPSKLS 62
EE EEEEEEE EE+ + S++S
Sbjct: 271 EEEEEEEEEEEEDEEEEEGLSQSISRIS 298
Score = 26.9 bits (58), Expect = 7.3
Identities = 12/21 (57%), Positives = 15/21 (71%)
Query: 35 EEYSTEEEEEEEKEEQSTNST 55
EE EEEEEEE+EE+ +T
Sbjct: 1024 EEEEEEEEEEEEEEEEQQPAT 1044
>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
[Homo sapiens]
Length = 2073
Score = 30.8 bits (68), Expect = 0.50
Identities = 14/28 (50%), Positives = 18/28 (64%)
Query: 35 EEYSTEEEEEEEKEEQSTNSTLDPSKLS 62
EE EEEEEEE+EE+ N P +L+
Sbjct: 1087 EEEDEEEEEEEEEEEEEENIQSSPPRLT 1114
>gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isoform
9 [Homo sapiens]
Length = 771
Score = 30.8 bits (68), Expect = 0.50
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 30 DGDIMEEYSTEEEEEEEKEEQSTNSTLDPSKLS 62
+G EE EEEEEEE+EE++ +++ + S+ S
Sbjct: 292 EGSTSEESEEEEEEEEEEEEETGSNSEEASEQS 324
Score = 28.1 bits (61), Expect = 3.3
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 39 TEEEEEEEKEEQSTNSTLDPSK 60
+EEEEEEE+EE+ ST + S+
Sbjct: 279 SEEEEEEEEEEEEEGSTSEESE 300
>gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isoform
8 [Homo sapiens]
Length = 780
Score = 30.8 bits (68), Expect = 0.50
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 30 DGDIMEEYSTEEEEEEEKEEQSTNSTLDPSKLS 62
+G EE EEEEEEE+EE++ +++ + S+ S
Sbjct: 301 EGSTSEESEEEEEEEEEEEEETGSNSEEASEQS 333
Score = 28.1 bits (61), Expect = 3.3
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 39 TEEEEEEEKEEQSTNSTLDPSK 60
+EEEEEEE+EE+ ST + S+
Sbjct: 288 SEEEEEEEEEEEEEGSTSEESE 309
>gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isoform
5 [Homo sapiens]
Length = 748
Score = 30.8 bits (68), Expect = 0.50
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 30 DGDIMEEYSTEEEEEEEKEEQSTNSTLDPSKLS 62
+G EE EEEEEEE+EE++ +++ + S+ S
Sbjct: 269 EGSTSEESEEEEEEEEEEEEETGSNSEEASEQS 301
Score = 28.1 bits (61), Expect = 3.3
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 39 TEEEEEEEKEEQSTNSTLDPSK 60
+EEEEEEE+EE+ ST + S+
Sbjct: 256 SEEEEEEEEEEEEEGSTSEESE 277
>gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isoform
4 [Homo sapiens]
Length = 737
Score = 30.8 bits (68), Expect = 0.50
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 30 DGDIMEEYSTEEEEEEEKEEQSTNSTLDPSKLS 62
+G EE EEEEEEE+EE++ +++ + S+ S
Sbjct: 258 EGSTSEESEEEEEEEEEEEEETGSNSEEASEQS 290
Score = 28.1 bits (61), Expect = 3.3
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 39 TEEEEEEEKEEQSTNSTLDPSK 60
+EEEEEEE+EE+ ST + S+
Sbjct: 245 SEEEEEEEEEEEEEGSTSEESE 266
>gi|16332360 cell division cycle 2-like 1 (PITSLRE proteins)
isoform 3 [Homo sapiens]
Length = 526
Score = 30.8 bits (68), Expect = 0.50
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 30 DGDIMEEYSTEEEEEEEKEEQSTNSTLDPSKLS 62
+G EE EEEEEEE+EE++ +++ + S+ S
Sbjct: 47 EGSTSEESEEEEEEEEEEEEETGSNSEEASEQS 79
Score = 28.1 bits (61), Expect = 3.3
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 39 TEEEEEEEKEEQSTNSTLDPSK 60
+EEEEEEE+EE+ ST + S+
Sbjct: 34 SEEEEEEEEEEEEEGSTSEESE 55
>gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isoform
2 [Homo sapiens]
Length = 782
Score = 30.8 bits (68), Expect = 0.50
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 30 DGDIMEEYSTEEEEEEEKEEQSTNSTLDPSKLS 62
+G EE EEEEEEE+EE++ +++ + S+ S
Sbjct: 303 EGSTSEESEEEEEEEEEEEEETGSNSEEASEQS 335
Score = 28.1 bits (61), Expect = 3.3
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 39 TEEEEEEEKEEQSTNSTLDPSK 60
+EEEEEEE+EE+ ST + S+
Sbjct: 290 SEEEEEEEEEEEEEGSTSEESE 311
>gi|17975763 myelin transcription factor 1 [Homo sapiens]
Length = 1121
Score = 30.0 bits (66), Expect = 0.86
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 11 LEKSVPSKKTTPKRIIHFVDGDIMEEYSTEEEEEEEKEEQ 50
LE + + + K I+ + D EE EEEEE+E+EE+
Sbjct: 240 LEDAASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEE 279
Score = 27.7 bits (60), Expect = 4.3
Identities = 25/115 (21%), Positives = 45/115 (39%), Gaps = 6/115 (5%)
Query: 30 DGDIMEEYSTEEEEEEEKEEQSTNSTLDPSKLSWGPYLRFWAGRIASTSFSTCEFLGGRF 89
D + EE EEEEEEE+EE+ + + P + F +++ E G
Sbjct: 274 DEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVIFQEDTSHTSAQKAPELRGPE- 332
Query: 90 AVFFGLTQPKYQYVLNEFYRIQNKKSDNKSERRGSKAQAAEVPNEKCHLEAGVQE 144
PK +Y + R + K ++ R+ + +E+ + G+ E
Sbjct: 333 -----SPSPKPEYSVIVEVRSDDDKDEDTHSRKSTVTDESEMQDMMTRGNLGLLE 382
>gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens]
Length = 1013
Score = 30.0 bits (66), Expect = 0.86
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Query: 29 VDGDIMEEYSTEEEEE--EEKEEQSTNSTLDPSKLSWGPYLRFWAGRIASTS 78
+ G+ MEE +EEEE EE+EE S W PY + R A +
Sbjct: 628 LSGEEMEESEEDEEEEDEEEEEEDEEESKAGGEDQLWRPYYSYKPKRKAGAA 679
>gi|192807284 zinc finger and BTB domain containing 4 [Homo sapiens]
Length = 1013
Score = 30.0 bits (66), Expect = 0.86
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Query: 29 VDGDIMEEYSTEEEEE--EEKEEQSTNSTLDPSKLSWGPYLRFWAGRIASTS 78
+ G+ MEE +EEEE EE+EE S W PY + R A +
Sbjct: 628 LSGEEMEESEEDEEEEDEEEEEEDEEESKAGGEDQLWRPYYSYKPKRKAGAA 679
>gi|154759293 cysteine-rich hydrophobic domain 1 [Homo sapiens]
Length = 224
Score = 30.0 bits (66), Expect = 0.86
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 30 DGDIMEEYSTEEEEEEEKEEQSTNSTLDPSKLSWGPYLRFWA 71
D + EE EEEEEEE+EE+ P ++ +LR +A
Sbjct: 44 DEEDEEEEEEEEEEEEEEEEEEEEEAPPPPRVVSEEHLRRYA 85
Score = 28.1 bits (61), Expect = 3.3
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 34 MEEYSTEEEEEEEKEEQSTNSTLDPSKLS 62
M E+ T E EEE+EE++ S+ PS S
Sbjct: 8 MAEFDTISELEEEEEEEAATSSSSPSSSS 36
Score = 27.7 bits (60), Expect = 4.3
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Query: 2 EIDGFQQLDLEK----SVPSKKTTPKRIIHFVDGDIMEEYSTEEEEEEEKEEQ 50
E D +L+ E+ + S + + D D +E EEEEEEE+EE+
Sbjct: 10 EFDTISELEEEEEEEAATSSSSPSSSSSVSGPDDDEEDEEEEEEEEEEEEEEE 62
Score = 27.3 bits (59), Expect = 5.6
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 30 DGDIMEEYSTEEEEEEEKEEQSTNSTLDP 58
D + EE EEEEEEE+EE+ P
Sbjct: 43 DDEEDEEEEEEEEEEEEEEEEEEEEEAPP 71
>gi|4503257 death-domain associated protein isoform a [Homo sapiens]
Length = 740
Score = 29.6 bits (65), Expect = 1.1
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 30 DGDIMEEYSTEEEEEEEKEEQSTNS 54
D D E EEEEEEE+EE++T+S
Sbjct: 437 DEDDEESDEEEEEEEEEEEEEATDS 461
Score = 26.9 bits (58), Expect = 7.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 30 DGDIMEEYSTEEEEEEEKEEQSTNSTLDPSKL 61
D + EE EEEEEEE+EE+ + + L
Sbjct: 436 DDEDDEESDEEEEEEEEEEEEEATDSEEEEDL 467
>gi|215422388 death-domain associated protein isoform a [Homo
sapiens]
Length = 740
Score = 29.6 bits (65), Expect = 1.1
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 30 DGDIMEEYSTEEEEEEEKEEQSTNS 54
D D E EEEEEEE+EE++T+S
Sbjct: 437 DEDDEESDEEEEEEEEEEEEEATDS 461
Score = 26.9 bits (58), Expect = 7.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 30 DGDIMEEYSTEEEEEEEKEEQSTNSTLDPSKL 61
D + EE EEEEEEE+EE+ + + L
Sbjct: 436 DDEDDEESDEEEEEEEEEEEEEATDSEEEEDL 467
>gi|215422366 death-domain associated protein isoform b [Homo
sapiens]
Length = 752
Score = 29.6 bits (65), Expect = 1.1
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 30 DGDIMEEYSTEEEEEEEKEEQSTNS 54
D D E EEEEEEE+EE++T+S
Sbjct: 449 DEDDEESDEEEEEEEEEEEEEATDS 473
Score = 26.9 bits (58), Expect = 7.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 30 DGDIMEEYSTEEEEEEEKEEQSTNSTLDPSKL 61
D + EE EEEEEEE+EE+ + + L
Sbjct: 448 DDEDDEESDEEEEEEEEEEEEEATDSEEEEDL 479
>gi|224809302 xeroderma pigmentosum, complementation group C isoform
2 [Homo sapiens]
Length = 903
Score = 29.6 bits (65), Expect = 1.1
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Query: 23 KRIIHFVDGDIMEEYSTEEEEEE--EKEEQSTNSTLDPSKLSWGPYLR 68
K+ H G M E S EEEEE + EE T + KL + YLR
Sbjct: 107 KKAHHLKRGATMNEDSNEEEEESENDWEEAKTRERSEKIKLEFETYLR 154
>gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens]
Length = 2454
Score = 29.6 bits (65), Expect = 1.1
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 35 EEYSTEEEEEEEKEEQSTNSTLDPSK 60
EE EEEEEEE+EE + + P K
Sbjct: 1412 EEEEEEEEEEEEEEEDENDDSKSPGK 1437
Score = 29.3 bits (64), Expect = 1.5
Identities = 14/26 (53%), Positives = 16/26 (61%)
Query: 35 EEYSTEEEEEEEKEEQSTNSTLDPSK 60
EE EEEEEEE+EE+ D SK
Sbjct: 1408 EEEKEEEEEEEEEEEEEEEDENDDSK 1433
Score = 28.1 bits (61), Expect = 3.3
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 7 QQLDLEKSVPSKKTTPKRI-IHFVDGDIMEEYSTEEEEEEEKEEQ 50
++ +LE++ S K KR I + E S EEEEEEKEE+
Sbjct: 1370 KKAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEEEEKEEE 1414
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.130 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,102,973
Number of Sequences: 37866
Number of extensions: 272411
Number of successful extensions: 5494
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 150
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 3757
Number of HSP's gapped (non-prelim): 1100
length of query: 158
length of database: 18,247,518
effective HSP length: 94
effective length of query: 64
effective length of database: 14,688,114
effective search space: 940039296
effective search space used: 940039296
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.