Guide to the Human Genome
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Name: FAM177A1 Sequence: fasta or formatted (213aa) NCBI GI: 118498366
Description:

hypothetical protein LOC283635 isoform 2

Not currently referenced in the text

Other entries for this name:
alt prot {236aa} hypothetical protein LOC283635 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         15           6
 C cysteine            0.5          1           1
 D aspartate           5.2         11           1
 E glutamate          14.6         31           8
 F phenylalanine       3.3          7           1
 G glycine             7.0         15           2
 H histidine           0.5          1           1
 I isoleucine          3.8          8           1
 K lysine              6.6         14           4
 L leucine             4.7         10           1
 M methionine          3.8          8           1
 N asparagine          3.3          7           1
 P proline             4.7         10           2
 Q glutamine           4.7         10           2
 R arginine            3.3          7           2
 S serine              8.0         17           3
 T threonine           5.2         11           1
 V valine              9.4         20           1
 W tryptophan          0.9          2           1
 Y tyrosine            3.8          8           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC283635 isoform 2 
FAM177A1              1.000   hypothetical protein LOC283635 isoform 1 
LOC100287782          0.351   PREDICTED: hypothetical protein XP_002342499 
FAM177B               0.238   hypothetical protein LOC400823 
MAGEB17               0.028   PREDICTED: melanoma antigen family B, 17 
MAGEB17               0.028   PREDICTED: melanoma antigen family B, 17 
MAGEB17               0.028   PREDICTED: melanoma antigen family B, 17 
USP35                 0.025   ubiquitin specific protease 35 
C4orf8                0.025   hypothetical protein LOC8603 
LOC100293631          0.025   PREDICTED: similar to solute carrier family 4 (anio...
LOC100288436          0.025   PREDICTED: similar to solute carrier family 4 (anio...
LOC100288436          0.025   PREDICTED: hypothetical protein XP_002342928 
MYT1                  0.025   myelin transcription factor 1 
SLC24A1               0.023   solute carrier family 24 (sodium/potassium/calcium ex...
EIF5B                 0.023   eukaryotic translation initiation factor 5B 
ZEB1                  0.020   zinc finger E-box binding homeobox 1 isoform a [Hom...
ZEB1                  0.020   zinc finger E-box binding homeobox 1 isoform b [Hom...
SLC4A1AP              0.020   solute carrier family 4 (anion exchanger), member 1...
HUWE1                 0.020   HECT, UBA and WWE domain containing 1 
FBXO3                 0.020   F-box only protein 3 isoform 1 
PODXL2                0.020   podocalyxin-like 2 
YTHDC1                0.020   splicing factor YT521-B isoform 2 
YTHDC1                0.020   splicing factor YT521-B isoform 1 
LOC100289089          0.018   PREDICTED: hypothetical protein XP_002343359 
KIF5C                 0.018   kinesin family member 5C 
CDC2L2                0.018   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.018   cell division cycle 2-like 2 isoform 1 
TCHH                  0.018   trichohyalin 
PRKCSH                0.018   protein kinase C substrate 80K-H isoform 2 
CDC2L1                0.018   cell division cycle 2-like 1 (PITSLRE proteins) isof...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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