Guide to the Human Genome
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Name: FAM177B Sequence: fasta or formatted (158aa) NCBI GI: 125346184
Description:

hypothetical protein LOC400823

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1          8           2
 C cysteine            1.3          2           1
 D aspartate           4.4          7           1
 E glutamate          13.3         21           7
 F phenylalanine       5.7          9           2
 G glycine             6.3         10           2
 H histidine           1.3          2           1
 I isoleucine          5.1          8           2
 K lysine              7.6         12           2
 L leucine             5.7          9           1
 M methionine          1.3          2           1
 N asparagine          3.2          5           1
 P proline             4.4          7           1
 Q glutamine           7.0         11           2
 R arginine            4.4          7           2
 S serine              8.2         13           1
 T threonine           6.3         10           2
 V valine              4.4          7           1
 W tryptophan          1.3          2           1
 Y tyrosine            3.8          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC400823 
FAM177A1              0.319   hypothetical protein LOC283635 isoform 2 
FAM177A1              0.319   hypothetical protein LOC283635 isoform 1 
LOC100287782          0.067   PREDICTED: hypothetical protein XP_002342499 
TRAK1                 0.034   OGT(O-Glc-NAc transferase)-interacting protein 106 K...
SLC4A1AP              0.023   solute carrier family 4 (anion exchanger), member 1...
SLC24A1               0.023   solute carrier family 24 (sodium/potassium/calcium ex...
MYT1L                 0.020   myelin transcription factor 1-like 
CDC2L2                0.020   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.020   cell division cycle 2-like 2 isoform 1 
LOC100293631          0.020   PREDICTED: similar to solute carrier family 4 (anio...
LOC100288436          0.020   PREDICTED: similar to solute carrier family 4 (anio...
LOC100288436          0.020   PREDICTED: hypothetical protein XP_002342928 
SCAF1                 0.020   SR-related CTD-associated factor 1 
MYST4                 0.020   MYST histone acetyltransferase (monocytic leukemia)...
CDC2L1                0.020   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.020   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.020   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.020   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.020   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.020   cell division cycle 2-like 1 (PITSLRE proteins) isof...
MYT1                  0.017   myelin transcription factor 1 
ZBTB4                 0.017   zinc finger and BTB domain containing 4 
ZBTB4                 0.017   zinc finger and BTB domain containing 4 
CHIC1                 0.017   cysteine-rich hydrophobic domain 1 
DAXX                  0.017   death-domain associated protein isoform a 
DAXX                  0.017   death-domain associated protein isoform a 
DAXX                  0.017   death-domain associated protein isoform b 
XPC                   0.017   xeroderma pigmentosum, complementation group C isof...
ATRX                  0.017   transcriptional regulator ATRX isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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