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Search of human proteins with 124494231
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|124494231 dermatan sulfate epimerase precursor [Homo
sapiens]
(958 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|124494231 dermatan sulfate epimerase precursor [Homo sapiens] 1962 0.0
gi|7019521 dermatan sulfate epimerase precursor [Homo sapiens] 1962 0.0
gi|23943787 dermatan sulfate epimerase-like [Homo sapiens] 672 0.0
gi|20149304 ISY1 splicing factor homolog [Homo sapiens] 35 0.26
gi|148746195 trichohyalin [Homo sapiens] 35 0.34
gi|118498362 kinectin 1 isoform b [Homo sapiens] 34 0.57
gi|46519147 ankyrin repeat and KH domain containing 1 isoform 1 ... 34 0.57
gi|37620163 ANKHD1-EIF4EBP3 protein [Homo sapiens] 34 0.57
gi|10947135 ATP-binding cassette, sub-family F, member 1 isoform... 34 0.75
gi|69354671 ATP-binding cassette, sub-family F, member 1 isoform... 34 0.75
gi|195976782 Paf1/RNA polymerase II complex component [Homo sapi... 33 0.98
gi|81295816 nasopharyngeal epithelium specific protein 1 [Homo s... 33 0.98
gi|124249396 coiled-coil domain containing 30 [Homo sapiens] 33 1.3
gi|118498356 kinectin 1 isoform a [Homo sapiens] 32 2.2
gi|118498368 kinectin 1 isoform c [Homo sapiens] 32 2.2
gi|33620775 kinectin 1 isoform a [Homo sapiens] 32 2.2
gi|52317136 olfactory receptor, family 5, subfamily T, member 3 ... 32 2.2
gi|41281453 serine/threonine kinase 2 [Homo sapiens] 32 2.8
gi|118150660 erythropoietin 4 immediate early response [Homo sap... 32 2.8
gi|4503509 eukaryotic translation initiation factor 3, subunit 1... 32 3.7
gi|4504063 golgin 97 [Homo sapiens] 32 3.7
gi|54607053 GCN1 general control of amino-acid synthesis 1-like ... 32 3.7
gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo sap... 31 4.8
gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo sa... 31 6.3
gi|119372317 xin actin-binding repeat containing 2 isoform 1 [Ho... 31 6.3
gi|116235456 ring finger protein 214 [Homo sapiens] 31 6.3
gi|116235451 ring finger protein 214 [Homo sapiens] 31 6.3
gi|4758472 G protein pathway suppressor 2 [Homo sapiens] 30 8.3
gi|48255883 troponin T type 2, cardiac isoform 4 [Homo sapiens] 30 8.3
gi|48255879 troponin T type 2, cardiac isoform 2 [Homo sapiens] 30 8.3
>gi|124494231 dermatan sulfate epimerase precursor [Homo sapiens]
Length = 958
Score = 1962 bits (5083), Expect = 0.0
Identities = 958/958 (100%), Positives = 958/958 (100%)
Query: 1 MRTHTRGAPSVFFIYLLCFVSAYITDENPEVMIPFTNANYDSHPMLYFSRAEVAELQLRA 60
MRTHTRGAPSVFFIYLLCFVSAYITDENPEVMIPFTNANYDSHPMLYFSRAEVAELQLRA
Sbjct: 1 MRTHTRGAPSVFFIYLLCFVSAYITDENPEVMIPFTNANYDSHPMLYFSRAEVAELQLRA 60
Query: 61 ASSHEHIAARLTEAVHTMLSSPLEYLPPWDPKDYSARWNEIFGNNLGALAMFCVLYPENI 120
ASSHEHIAARLTEAVHTMLSSPLEYLPPWDPKDYSARWNEIFGNNLGALAMFCVLYPENI
Sbjct: 61 ASSHEHIAARLTEAVHTMLSSPLEYLPPWDPKDYSARWNEIFGNNLGALAMFCVLYPENI 120
Query: 121 EARDMAKDYMERMAAQPSWLVKDAPWDEVPLAHSLVGFATAYDFLYNYLSKTQQEKFLEV 180
EARDMAKDYMERMAAQPSWLVKDAPWDEVPLAHSLVGFATAYDFLYNYLSKTQQEKFLEV
Sbjct: 121 EARDMAKDYMERMAAQPSWLVKDAPWDEVPLAHSLVGFATAYDFLYNYLSKTQQEKFLEV 180
Query: 181 IANASGYMYETSYRRGWGFQYLHNHQPTNCMALLTGSLVLMNQGYLQEAYLWTKQVLTIM 240
IANASGYMYETSYRRGWGFQYLHNHQPTNCMALLTGSLVLMNQGYLQEAYLWTKQVLTIM
Sbjct: 181 IANASGYMYETSYRRGWGFQYLHNHQPTNCMALLTGSLVLMNQGYLQEAYLWTKQVLTIM 240
Query: 241 EKSLVLLREVTDGSLYEGVAYGSYTTRSLFQYMFLVQRHFNINHFGHPWLKQHFAFMYRT 300
EKSLVLLREVTDGSLYEGVAYGSYTTRSLFQYMFLVQRHFNINHFGHPWLKQHFAFMYRT
Sbjct: 241 EKSLVLLREVTDGSLYEGVAYGSYTTRSLFQYMFLVQRHFNINHFGHPWLKQHFAFMYRT 300
Query: 301 ILPGFQRTVAIADSNYNWFYGPESQLVFLDKFVMRNGSGNWLADQIRRNRVVEGPGTPSK 360
ILPGFQRTVAIADSNYNWFYGPESQLVFLDKFVMRNGSGNWLADQIRRNRVVEGPGTPSK
Sbjct: 301 ILPGFQRTVAIADSNYNWFYGPESQLVFLDKFVMRNGSGNWLADQIRRNRVVEGPGTPSK 360
Query: 361 GQRWCTLHTEFLWYDGSLKSVPPPDFGTPTLHYFEDWGVVTYGSALPAEINRSFLSFKSG 420
GQRWCTLHTEFLWYDGSLKSVPPPDFGTPTLHYFEDWGVVTYGSALPAEINRSFLSFKSG
Sbjct: 361 GQRWCTLHTEFLWYDGSLKSVPPPDFGTPTLHYFEDWGVVTYGSALPAEINRSFLSFKSG 420
Query: 421 KLGGRAIYDIVHRNKYKDWIKGWRNFNAGHEHPDQNSFTFAPNGVPFITEALYGPKYTFF 480
KLGGRAIYDIVHRNKYKDWIKGWRNFNAGHEHPDQNSFTFAPNGVPFITEALYGPKYTFF
Sbjct: 421 KLGGRAIYDIVHRNKYKDWIKGWRNFNAGHEHPDQNSFTFAPNGVPFITEALYGPKYTFF 480
Query: 481 NNVLMFSPAVSKSCFSPWVGQVTEDCSSKWSKYKHDLAASCQGRVVAAEEKNGVVFIRGE 540
NNVLMFSPAVSKSCFSPWVGQVTEDCSSKWSKYKHDLAASCQGRVVAAEEKNGVVFIRGE
Sbjct: 481 NNVLMFSPAVSKSCFSPWVGQVTEDCSSKWSKYKHDLAASCQGRVVAAEEKNGVVFIRGE 540
Query: 541 GVGAYNPQLNLKNVQRNLILLHPQLLLLVDQIHLGEESPLETAASFFHNVDVPFEETVVD 600
GVGAYNPQLNLKNVQRNLILLHPQLLLLVDQIHLGEESPLETAASFFHNVDVPFEETVVD
Sbjct: 541 GVGAYNPQLNLKNVQRNLILLHPQLLLLVDQIHLGEESPLETAASFFHNVDVPFEETVVD 600
Query: 601 GVHGAFIRQRDGLYKMYWMDDTGYSEKATFASVTYPRGYPYNGTNYVNVTMHLRSPITRA 660
GVHGAFIRQRDGLYKMYWMDDTGYSEKATFASVTYPRGYPYNGTNYVNVTMHLRSPITRA
Sbjct: 601 GVHGAFIRQRDGLYKMYWMDDTGYSEKATFASVTYPRGYPYNGTNYVNVTMHLRSPITRA 660
Query: 661 AYLFIGPSIDVQSFTVHGDSQQLDVFIATSKHAYATYLWTGEATGQSAFAQVIADRHKIL 720
AYLFIGPSIDVQSFTVHGDSQQLDVFIATSKHAYATYLWTGEATGQSAFAQVIADRHKIL
Sbjct: 661 AYLFIGPSIDVQSFTVHGDSQQLDVFIATSKHAYATYLWTGEATGQSAFAQVIADRHKIL 720
Query: 721 FDRNSAIKSSIVPEVKDYAAIVEQNLQHFKPVFQLLEKQILSRVRNTASFRKTAERLLRF 780
FDRNSAIKSSIVPEVKDYAAIVEQNLQHFKPVFQLLEKQILSRVRNTASFRKTAERLLRF
Sbjct: 721 FDRNSAIKSSIVPEVKDYAAIVEQNLQHFKPVFQLLEKQILSRVRNTASFRKTAERLLRF 780
Query: 781 SDKRQTEEAIDRIFAISQQQQQQSKSKKNRRAGKRYKFVDAVPDIFAQIEVNEKKIRQKA 840
SDKRQTEEAIDRIFAISQQQQQQSKSKKNRRAGKRYKFVDAVPDIFAQIEVNEKKIRQKA
Sbjct: 781 SDKRQTEEAIDRIFAISQQQQQQSKSKKNRRAGKRYKFVDAVPDIFAQIEVNEKKIRQKA 840
Query: 841 QILAQKELPIDEDEEMKDLLDFADVTYEKHKNGGLIKGRFGQARMVTTTHSRAPSLSASY 900
QILAQKELPIDEDEEMKDLLDFADVTYEKHKNGGLIKGRFGQARMVTTTHSRAPSLSASY
Sbjct: 841 QILAQKELPIDEDEEMKDLLDFADVTYEKHKNGGLIKGRFGQARMVTTTHSRAPSLSASY 900
Query: 901 TRLFLILNIAIFFVMLAMQLTYFQRAQSLHGQRCLYAVLLIDSCILLWLYSSCSQSQC 958
TRLFLILNIAIFFVMLAMQLTYFQRAQSLHGQRCLYAVLLIDSCILLWLYSSCSQSQC
Sbjct: 901 TRLFLILNIAIFFVMLAMQLTYFQRAQSLHGQRCLYAVLLIDSCILLWLYSSCSQSQC 958
>gi|7019521 dermatan sulfate epimerase precursor [Homo sapiens]
Length = 958
Score = 1962 bits (5083), Expect = 0.0
Identities = 958/958 (100%), Positives = 958/958 (100%)
Query: 1 MRTHTRGAPSVFFIYLLCFVSAYITDENPEVMIPFTNANYDSHPMLYFSRAEVAELQLRA 60
MRTHTRGAPSVFFIYLLCFVSAYITDENPEVMIPFTNANYDSHPMLYFSRAEVAELQLRA
Sbjct: 1 MRTHTRGAPSVFFIYLLCFVSAYITDENPEVMIPFTNANYDSHPMLYFSRAEVAELQLRA 60
Query: 61 ASSHEHIAARLTEAVHTMLSSPLEYLPPWDPKDYSARWNEIFGNNLGALAMFCVLYPENI 120
ASSHEHIAARLTEAVHTMLSSPLEYLPPWDPKDYSARWNEIFGNNLGALAMFCVLYPENI
Sbjct: 61 ASSHEHIAARLTEAVHTMLSSPLEYLPPWDPKDYSARWNEIFGNNLGALAMFCVLYPENI 120
Query: 121 EARDMAKDYMERMAAQPSWLVKDAPWDEVPLAHSLVGFATAYDFLYNYLSKTQQEKFLEV 180
EARDMAKDYMERMAAQPSWLVKDAPWDEVPLAHSLVGFATAYDFLYNYLSKTQQEKFLEV
Sbjct: 121 EARDMAKDYMERMAAQPSWLVKDAPWDEVPLAHSLVGFATAYDFLYNYLSKTQQEKFLEV 180
Query: 181 IANASGYMYETSYRRGWGFQYLHNHQPTNCMALLTGSLVLMNQGYLQEAYLWTKQVLTIM 240
IANASGYMYETSYRRGWGFQYLHNHQPTNCMALLTGSLVLMNQGYLQEAYLWTKQVLTIM
Sbjct: 181 IANASGYMYETSYRRGWGFQYLHNHQPTNCMALLTGSLVLMNQGYLQEAYLWTKQVLTIM 240
Query: 241 EKSLVLLREVTDGSLYEGVAYGSYTTRSLFQYMFLVQRHFNINHFGHPWLKQHFAFMYRT 300
EKSLVLLREVTDGSLYEGVAYGSYTTRSLFQYMFLVQRHFNINHFGHPWLKQHFAFMYRT
Sbjct: 241 EKSLVLLREVTDGSLYEGVAYGSYTTRSLFQYMFLVQRHFNINHFGHPWLKQHFAFMYRT 300
Query: 301 ILPGFQRTVAIADSNYNWFYGPESQLVFLDKFVMRNGSGNWLADQIRRNRVVEGPGTPSK 360
ILPGFQRTVAIADSNYNWFYGPESQLVFLDKFVMRNGSGNWLADQIRRNRVVEGPGTPSK
Sbjct: 301 ILPGFQRTVAIADSNYNWFYGPESQLVFLDKFVMRNGSGNWLADQIRRNRVVEGPGTPSK 360
Query: 361 GQRWCTLHTEFLWYDGSLKSVPPPDFGTPTLHYFEDWGVVTYGSALPAEINRSFLSFKSG 420
GQRWCTLHTEFLWYDGSLKSVPPPDFGTPTLHYFEDWGVVTYGSALPAEINRSFLSFKSG
Sbjct: 361 GQRWCTLHTEFLWYDGSLKSVPPPDFGTPTLHYFEDWGVVTYGSALPAEINRSFLSFKSG 420
Query: 421 KLGGRAIYDIVHRNKYKDWIKGWRNFNAGHEHPDQNSFTFAPNGVPFITEALYGPKYTFF 480
KLGGRAIYDIVHRNKYKDWIKGWRNFNAGHEHPDQNSFTFAPNGVPFITEALYGPKYTFF
Sbjct: 421 KLGGRAIYDIVHRNKYKDWIKGWRNFNAGHEHPDQNSFTFAPNGVPFITEALYGPKYTFF 480
Query: 481 NNVLMFSPAVSKSCFSPWVGQVTEDCSSKWSKYKHDLAASCQGRVVAAEEKNGVVFIRGE 540
NNVLMFSPAVSKSCFSPWVGQVTEDCSSKWSKYKHDLAASCQGRVVAAEEKNGVVFIRGE
Sbjct: 481 NNVLMFSPAVSKSCFSPWVGQVTEDCSSKWSKYKHDLAASCQGRVVAAEEKNGVVFIRGE 540
Query: 541 GVGAYNPQLNLKNVQRNLILLHPQLLLLVDQIHLGEESPLETAASFFHNVDVPFEETVVD 600
GVGAYNPQLNLKNVQRNLILLHPQLLLLVDQIHLGEESPLETAASFFHNVDVPFEETVVD
Sbjct: 541 GVGAYNPQLNLKNVQRNLILLHPQLLLLVDQIHLGEESPLETAASFFHNVDVPFEETVVD 600
Query: 601 GVHGAFIRQRDGLYKMYWMDDTGYSEKATFASVTYPRGYPYNGTNYVNVTMHLRSPITRA 660
GVHGAFIRQRDGLYKMYWMDDTGYSEKATFASVTYPRGYPYNGTNYVNVTMHLRSPITRA
Sbjct: 601 GVHGAFIRQRDGLYKMYWMDDTGYSEKATFASVTYPRGYPYNGTNYVNVTMHLRSPITRA 660
Query: 661 AYLFIGPSIDVQSFTVHGDSQQLDVFIATSKHAYATYLWTGEATGQSAFAQVIADRHKIL 720
AYLFIGPSIDVQSFTVHGDSQQLDVFIATSKHAYATYLWTGEATGQSAFAQVIADRHKIL
Sbjct: 661 AYLFIGPSIDVQSFTVHGDSQQLDVFIATSKHAYATYLWTGEATGQSAFAQVIADRHKIL 720
Query: 721 FDRNSAIKSSIVPEVKDYAAIVEQNLQHFKPVFQLLEKQILSRVRNTASFRKTAERLLRF 780
FDRNSAIKSSIVPEVKDYAAIVEQNLQHFKPVFQLLEKQILSRVRNTASFRKTAERLLRF
Sbjct: 721 FDRNSAIKSSIVPEVKDYAAIVEQNLQHFKPVFQLLEKQILSRVRNTASFRKTAERLLRF 780
Query: 781 SDKRQTEEAIDRIFAISQQQQQQSKSKKNRRAGKRYKFVDAVPDIFAQIEVNEKKIRQKA 840
SDKRQTEEAIDRIFAISQQQQQQSKSKKNRRAGKRYKFVDAVPDIFAQIEVNEKKIRQKA
Sbjct: 781 SDKRQTEEAIDRIFAISQQQQQQSKSKKNRRAGKRYKFVDAVPDIFAQIEVNEKKIRQKA 840
Query: 841 QILAQKELPIDEDEEMKDLLDFADVTYEKHKNGGLIKGRFGQARMVTTTHSRAPSLSASY 900
QILAQKELPIDEDEEMKDLLDFADVTYEKHKNGGLIKGRFGQARMVTTTHSRAPSLSASY
Sbjct: 841 QILAQKELPIDEDEEMKDLLDFADVTYEKHKNGGLIKGRFGQARMVTTTHSRAPSLSASY 900
Query: 901 TRLFLILNIAIFFVMLAMQLTYFQRAQSLHGQRCLYAVLLIDSCILLWLYSSCSQSQC 958
TRLFLILNIAIFFVMLAMQLTYFQRAQSLHGQRCLYAVLLIDSCILLWLYSSCSQSQC
Sbjct: 901 TRLFLILNIAIFFVMLAMQLTYFQRAQSLHGQRCLYAVLLIDSCILLWLYSSCSQSQC 958
>gi|23943787 dermatan sulfate epimerase-like [Homo sapiens]
Length = 1222
Score = 672 bits (1733), Expect = 0.0
Identities = 326/635 (51%), Positives = 432/635 (68%), Gaps = 9/635 (1%)
Query: 43 HPMLYFSRAEVAELQLRAASSHEHIAARLTEAVHTMLSSPLEYLPPWDPKDYSARWNEIF 102
HP LYF E+ ++ ++ +SH H+ + AV MLS+P YLPP D++A+WNEI+
Sbjct: 72 HPSLYFDAGEIQAMRQKSRASHLHLFRAIRSAVTVMLSNPTYYLPPPKHADFAAKWNEIY 131
Query: 103 GNNLGALAMFCVLYPENIEARDMAKDYMERMAAQPSWLVKDAPWDEVPLAHSLVGFATAY 162
GNNL LA++C+L PE+ A + +YM+RM WLV++AP DEVP+ HSL GFATA+
Sbjct: 132 GNNLPPLALYCLLCPEDKVAFEFVLEYMDRMVGYKDWLVENAPGDEVPIGHSLTGFATAF 191
Query: 163 DFLYNYLSKTQQEKFLEVIANASGYMYETSYRRGWGFQYLHNHQPTNCMALLTGSLVL-M 221
DFLYN L +++K+LE I + MYE S R WG Q LHNHQ TN +ALLTG+LV +
Sbjct: 192 DFLYNLLDNHRRQKYLEKIWVITEEMYEYSKVRSWGKQLLHNHQATNMIALLTGALVTGV 251
Query: 222 NQGYLQEAYLWTKQVLTIMEKSLVLLREVTDGSLYEGVAYGSYTTRSLFQYMFLVQRHFN 281
++G +A +W + V+ +MEK++ LL + DGSL EGVAYGSYT +S+ QY+FL QRHFN
Sbjct: 252 DKG--SKANIWKQAVVDVMEKTMFLLNHIVDGSLDEGVAYGSYTAKSVTQYVFLAQRHFN 309
Query: 282 INHFGHPWLKQHFAFMYRTILPGFQRTVAIADSNYNWFYGPESQLVFLDKFVMRNGSGNW 341
IN+ + WLK HF F Y T+LPGFQRTV IADSNYNWFYGPESQLVFLDKF+++NG+GNW
Sbjct: 310 INNLDNNWLKMHFWFYYATLLPGFQRTVGIADSNYNWFYGPESQLVFLDKFILKNGAGNW 369
Query: 342 LADQIRRNRVVEGPGTPSKGQRWCTLHTEFLWYDGSLKSVPPPDFGTPTLHYFEDWGVVT 401
LA QIR++R +GP PS QRW TLHTE++WYD L PP D+GT +H F +WGVVT
Sbjct: 370 LAQQIRKHRPKDGPMVPSTAQRWSTLHTEYIWYDPQLTPQPPADYGTAKIHTFPNWGVVT 429
Query: 402 YGSALPAEINRSFLSFKSGKLGGRAIYDIVHRNKYKDWIKGWRNFNAGHEHPDQNSFTFA 461
YG+ LP +F+SFKSGKLGGRA+YDIVH Y WI GWR+FN GHEHPDQNSFTFA
Sbjct: 430 YGAGLPNTQTNTFVSFKSGKLGGRAVYDIVHFQPY-SWIDGWRSFNPGHEHPDQNSFTFA 488
Query: 462 PNGVPFITEALYGPKYTFFNNVLMFSPAVSKSCFSPWVGQVTEDCSSKWSKYKHDLAASC 521
PNG F++EALYGPK + NNVL+F+P+ S C PW GQ+ E ++W K+ +
Sbjct: 489 PNGQVFVSEALYGPKLSHLNNVLVFAPSPSSQCNKPWEGQLGE--CAQWLKWTGEEVGDA 546
Query: 522 QGRVVAAEEKNGVVFIRGEGVGAYNPQLNLKNVQRNLILLHPQLLLLVDQIHLGEESPLE 581
G ++ A + +VF+ GE V AY+ + LK+V R L+LL+ Q LL+VD I E+SP+
Sbjct: 547 AGEIITASQHGEMVFVSGEAVSAYSSAMRLKSVYRALLLLNSQTLLVVDHIERQEDSPIN 606
Query: 582 TAASFFHNVDVPFE---ETVVDGVHGAFIRQRDGLYKMYWMDDTGYSEKATFASVTYPRG 638
+ ++FFHN+D+ F+ ++ +GA + D YKM+W D G S A+
Sbjct: 607 SVSAFFHNLDIDFKYIPYKFMNRYNGAMMDVWDAHYKMFWFDHHGNSPMASIQEAEQAAE 666
Query: 639 YPYNGTNYVNVTMHLRSPITRAAYLFIGPSIDVQS 673
+ T +VNVT + ITR AY+F GP I+V S
Sbjct: 667 FKKRWTQFVNVTFQMEPTITRIAYVFYGPYINVSS 701
>gi|20149304 ISY1 splicing factor homolog [Homo sapiens]
Length = 285
Score = 35.4 bits (80), Expect = 0.26
Identities = 29/114 (25%), Positives = 57/114 (50%), Gaps = 8/114 (7%)
Query: 756 LEKQILSRVRNTASFRKTAERLLRFS----DKRQTEEAIDRIFAISQQQQQQSKSKKNRR 811
LE++ ++R + AER R + ++ + EE I+A+++++ + S++
Sbjct: 173 LEQEYEKKLRAELVEKWKAEREARLARGEKEEEEEEEEEINIYAVTEEESDEEGSQEKGG 232
Query: 812 AGKRYKFVDAVPDIFAQIEVNEKKIRQKAQILAQK---ELPIDEDEEMKDLLDF 862
+ KF+ VP + +Q E+ E +R+K L QK E + EE + LL +
Sbjct: 233 DDSQQKFIAHVP-VPSQQEIEEALVRRKKMELLQKYASETLQAQSEEARRLLGY 285
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 35.0 bits (79), Expect = 0.34
Identities = 27/117 (23%), Positives = 58/117 (49%), Gaps = 16/117 (13%)
Query: 743 EQNLQHFKPVFQLLEKQILSRVRNTAS--FRKTAERLLRFSDKRQTEEAIDRIFAISQQQ 800
E+ + F +Q EK R R +A R+ ER LR +++Q E+ + +++
Sbjct: 761 EEQRRDFTWQWQAEEKSERGRQRLSARPPLREQRERQLRAEERQQREQRF-----LPEEE 815
Query: 801 QQQSKSKKNRRAGKRYKFVDAVPDIFAQIEVNEKKIRQKAQILAQKELPIDEDEEMK 857
+++ + ++ R K +F++ E + + R++AQ L ++E + ED+E +
Sbjct: 816 EKEQRRRQRREREKELQFLE---------EEEQLQRRERAQQLQEEEDGLQEDQERR 863
>gi|118498362 kinectin 1 isoform b [Homo sapiens]
Length = 1306
Score = 34.3 bits (77), Expect = 0.57
Identities = 39/166 (23%), Positives = 74/166 (44%), Gaps = 15/166 (9%)
Query: 715 DRHKILFDRNSAIKSSIVPEVKDYAAIVEQNLQHFKPVFQLLEKQILSRVRNTASFRKTA 774
+ KIL D+N A+KS EV+ +V + Q K V + +EK I + + +
Sbjct: 698 EEFKILNDQNKALKS----EVQKLQTLVSE--QPNKDVVEQMEKCIQEKDEKLKTVEELL 751
Query: 775 ER-LLRFSDKRQTEEAIDRIFAISQQQQQQSKSKKNRRAGKRYKFVDAVPDIFAQIEVNE 833
E L++ + K + AI + ++ Q K+K+N + F V ++ I +
Sbjct: 752 ETGLIQVATKEEELNAIRTENSSLTKEVQDLKAKQN----DQVSFASLVEELKKVIHEKD 807
Query: 834 KKIRQKAQILAQKELPIDEDEEMKDLLDFADVTYEKHKNGGLIKGR 879
KI+ ++L + L + E+ L +T + + L+KG+
Sbjct: 808 GKIKSVEELLEAELLKVANKEKTVQL----SITSKVQELQNLLKGK 849
>gi|46519147 ankyrin repeat and KH domain containing 1 isoform 1 [Homo
sapiens]
Length = 2542
Score = 34.3 bits (77), Expect = 0.57
Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 19/120 (15%)
Query: 739 AAIVEQNLQHFKPVFQLLEKQILSRVRNTASFRKTAERLLRFSDKRQTEEAIDRIFAISQ 798
A I ++ L K Q +E + ++ + A K A LL+ D ++ E + ++
Sbjct: 1395 ATITDKEL--LKKCHQCVETIVKAKDQQAAEANKNASILLKELDLEKSREESRKQALAAK 1452
Query: 799 QQQQQSKSKKNRRAGKRYKFVDAVPDIFAQIEVNEKKIRQKAQILAQKELPIDEDEEMKD 858
+++++ K KK + KR Q E E K ++ + ELP DEDEE D
Sbjct: 1453 REKRKEKRKKKKEEQKR-----------KQEEDEENKPKENS------ELPEDEDEEEND 1495
>gi|37620163 ANKHD1-EIF4EBP3 protein [Homo sapiens]
Length = 2617
Score = 34.3 bits (77), Expect = 0.57
Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 19/120 (15%)
Query: 739 AAIVEQNLQHFKPVFQLLEKQILSRVRNTASFRKTAERLLRFSDKRQTEEAIDRIFAISQ 798
A I ++ L K Q +E + ++ + A K A LL+ D ++ E + ++
Sbjct: 1395 ATITDKEL--LKKCHQCVETIVKAKDQQAAEANKNASILLKELDLEKSREESRKQALAAK 1452
Query: 799 QQQQQSKSKKNRRAGKRYKFVDAVPDIFAQIEVNEKKIRQKAQILAQKELPIDEDEEMKD 858
+++++ K KK + KR Q E E K ++ + ELP DEDEE D
Sbjct: 1453 REKRKEKRKKKKEEQKR-----------KQEEDEENKPKENS------ELPEDEDEEEND 1495
>gi|10947135 ATP-binding cassette, sub-family F, member 1 isoform b
[Homo sapiens]
Length = 807
Score = 33.9 bits (76), Expect = 0.75
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 759 QILSRVRNTASFRKTAERLLRFSDKRQTEE--AIDRIFAISQQQQQQSKSKKNRRAGKRY 816
+++ + + +KT L DK+ EE + QQQQQQ K K++ R G+R
Sbjct: 26 KVVKKGKKDKKIKKTFFEELAVEDKQAGEEEKVLKEKEQQQQQQQQQQKKKRDTRKGRRK 85
Query: 817 KFVD 820
K VD
Sbjct: 86 KDVD 89
>gi|69354671 ATP-binding cassette, sub-family F, member 1 isoform a
[Homo sapiens]
Length = 845
Score = 33.9 bits (76), Expect = 0.75
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 759 QILSRVRNTASFRKTAERLLRFSDKRQTEE--AIDRIFAISQQQQQQSKSKKNRRAGKRY 816
+++ + + +KT L DK+ EE + QQQQQQ K K++ R G+R
Sbjct: 26 KVVKKGKKDKKIKKTFFEELAVEDKQAGEEEKVLKEKEQQQQQQQQQQKKKRDTRKGRRK 85
Query: 817 KFVD 820
K VD
Sbjct: 86 KDVD 89
>gi|195976782 Paf1/RNA polymerase II complex component [Homo
sapiens]
Length = 710
Score = 33.5 bits (75), Expect = 0.98
Identities = 30/115 (26%), Positives = 58/115 (50%), Gaps = 9/115 (7%)
Query: 752 VFQLLEK-QILSRVRNTASFRKTAERLLRFSDKRQTEEAIDRIFAISQQQQQQSKSKKNR 810
+F +EK ++L R KTA++ + K++ EE ++ Q+ Q + K R
Sbjct: 208 LFNRIEKREVLKRRFEIKKKLKTAKKKEKKEKKKKQEEEQEKKKLTQIQESQVTSHNKER 267
Query: 811 RAGKRYKFVDAVPDIFAQIEV-NEKKIRQKAQILAQK------ELPIDEDEEMKD 858
R+ KR + +D +++ EK+ + A++LA+K E+ D++EE +D
Sbjct: 268 RS-KRDEKLDKKSQAMEELKAEREKRKNRTAELLAKKQPLKTSEVYSDDEEEEED 321
>gi|81295816 nasopharyngeal epithelium specific protein 1 [Homo
sapiens]
Length = 551
Score = 33.5 bits (75), Expect = 0.98
Identities = 36/161 (22%), Positives = 74/161 (45%), Gaps = 30/161 (18%)
Query: 707 SAFAQVIADRHKILFDRNSAIKSSIVPEVKDYAAIVEQNLQHFKPVFQLLEKQILSRVRN 766
S +V +R + L R + ++ E+KD + I+ H Q+LEKQ + + +
Sbjct: 163 SDLEEVAKERAQNLLQRANKLRMEQEEELKDMSKIILNAKCHAIRDAQILEKQQIQKELD 222
Query: 767 TASFRKTAERLLRFSDKRQTEEAIDRIFAISQQQQQQSKSKKNRRAGKRYKFVDAVPDIF 826
T K ++++ ++R +I +Q++ + K ++ R G+R I
Sbjct: 223 TE--EKRLDQMME----------VERQKSIQRQEELERKRREERIRGRR--------QIV 262
Query: 827 AQIEVN--------EKKIRQKAQILAQKELPIDEDEEMKDL 859
Q+E N E++ ++K Q+L E ++E++KD+
Sbjct: 263 EQMEKNQEERSLLAEQREQEKEQMLEYMEQL--QEEDLKDM 301
>gi|124249396 coiled-coil domain containing 30 [Homo sapiens]
Length = 783
Score = 33.1 bits (74), Expect = 1.3
Identities = 31/155 (20%), Positives = 59/155 (38%), Gaps = 9/155 (5%)
Query: 757 EKQILSRVRNTASFRKTAERLLRFSDKRQTEEAIDRIFAISQQQQQQSKSKKNRRAGKRY 816
E++IL R K S+K+Q EE I + Q + + K + KR
Sbjct: 353 EEKILDLQRKLEHAHKVCLTDTCISEKQQLEEKIKE----ATQNEAKVKQQYQEEQQKRK 408
Query: 817 KFVDAVPDIFAQIEVNEKKIRQKAQILAQKELPIDEDEEMKDLLDFADVTYEKHKNGGLI 876
V ++ Q+ + K +Q++ I + E + L+ Y++H +
Sbjct: 409 LLYQNVDELHRQVRTLQDKENLLEMTCSQQQSRIQQQEALLKQLENEKRKYDEH-----V 463
Query: 877 KGRFGQARMVTTTHSRAPSLSASYTRLFLILNIAI 911
K + ++ +L Y RL +LN+ +
Sbjct: 464 KSNQELSEKLSKLQQEKEALREEYLRLLKLLNVHV 498
>gi|118498356 kinectin 1 isoform a [Homo sapiens]
Length = 1357
Score = 32.3 bits (72), Expect = 2.2
Identities = 35/147 (23%), Positives = 70/147 (47%), Gaps = 12/147 (8%)
Query: 715 DRHKILFDRNSAIKSSIVPEVKDYAAIVEQNLQHFKPVFQLLEKQILSRVRNTASFRKTA 774
+ KIL D+N A+KS EV+ +V + Q K V + +EK I + + +
Sbjct: 698 EEFKILNDQNKALKS----EVQKLQTLVSE--QPNKDVVEQMEKCIQEKDEKLKTVEELL 751
Query: 775 ER-LLRFSDKRQTEEAIDRIFAISQQQQQQSKSKKNRRAGKRYKFVDAVPDIFAQIEVNE 833
E L++ + K + AI + ++ Q K+K+N + F V ++ I +
Sbjct: 752 ETGLIQVATKEEELNAIRTENSSLTKEVQDLKAKQN----DQVSFASLVEELKKVIHEKD 807
Query: 834 KKIRQKAQILAQKELPI-DEDEEMKDL 859
KI+ ++L + L + ++++ ++DL
Sbjct: 808 GKIKSVEELLEAELLKVANKEKTVQDL 834
>gi|118498368 kinectin 1 isoform c [Homo sapiens]
Length = 1300
Score = 32.3 bits (72), Expect = 2.2
Identities = 35/147 (23%), Positives = 70/147 (47%), Gaps = 12/147 (8%)
Query: 715 DRHKILFDRNSAIKSSIVPEVKDYAAIVEQNLQHFKPVFQLLEKQILSRVRNTASFRKTA 774
+ KIL D+N A+KS EV+ +V + Q K V + +EK I + + +
Sbjct: 698 EEFKILNDQNKALKS----EVQKLQTLVSE--QPNKDVVEQMEKCIQEKDEKLKTVEELL 751
Query: 775 ER-LLRFSDKRQTEEAIDRIFAISQQQQQQSKSKKNRRAGKRYKFVDAVPDIFAQIEVNE 833
E L++ + K + AI + ++ Q K+K+N + F V ++ I +
Sbjct: 752 ETGLIQVATKEEELNAIRTENSSLTKEVQDLKAKQN----DQVSFASLVEELKKVIHEKD 807
Query: 834 KKIRQKAQILAQKELPI-DEDEEMKDL 859
KI+ ++L + L + ++++ ++DL
Sbjct: 808 GKIKSVEELLEAELLKVANKEKTVQDL 834
>gi|33620775 kinectin 1 isoform a [Homo sapiens]
Length = 1357
Score = 32.3 bits (72), Expect = 2.2
Identities = 35/147 (23%), Positives = 70/147 (47%), Gaps = 12/147 (8%)
Query: 715 DRHKILFDRNSAIKSSIVPEVKDYAAIVEQNLQHFKPVFQLLEKQILSRVRNTASFRKTA 774
+ KIL D+N A+KS EV+ +V + Q K V + +EK I + + +
Sbjct: 698 EEFKILNDQNKALKS----EVQKLQTLVSE--QPNKDVVEQMEKCIQEKDEKLKTVEELL 751
Query: 775 ER-LLRFSDKRQTEEAIDRIFAISQQQQQQSKSKKNRRAGKRYKFVDAVPDIFAQIEVNE 833
E L++ + K + AI + ++ Q K+K+N + F V ++ I +
Sbjct: 752 ETGLIQVATKEEELNAIRTENSSLTKEVQDLKAKQN----DQVSFASLVEELKKVIHEKD 807
Query: 834 KKIRQKAQILAQKELPI-DEDEEMKDL 859
KI+ ++L + L + ++++ ++DL
Sbjct: 808 GKIKSVEELLEAELLKVANKEKTVQDL 834
>gi|52317136 olfactory receptor, family 5, subfamily T, member 3
[Homo sapiens]
Length = 340
Score = 32.3 bits (72), Expect = 2.2
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 9 PSVFFIYLLCFVSA-YITDENPEVMIPFTNANYD------SHPMLYFSRAEVAELQLRAA 61
P +F+ +L F+ A Y T P++++ F N + ML F E L AA
Sbjct: 88 PMYYFLSVLSFLDACYSTVVTPKMLVNFLAKNKSISFIGCATQMLLFVTFGTTECFLLAA 147
Query: 62 SSHEHIAARLTEAVHTMLSSPLEYLP 87
+++H A ++++ SP Y+P
Sbjct: 148 MAYDHYVAIYNPLLYSVSMSPRVYVP 173
>gi|41281453 serine/threonine kinase 2 [Homo sapiens]
Length = 1235
Score = 32.0 bits (71), Expect = 2.8
Identities = 27/117 (23%), Positives = 55/117 (47%), Gaps = 15/117 (12%)
Query: 754 QLLEKQILSRVRNTASFRKTA--ERLLRFSDKRQTEEAIDRIFAISQQQQQQSKSKKNRR 811
Q E+ L +++ + + + A ++ LR + ++ D+I Q Q+ K +KN R
Sbjct: 1064 QTQERARLPKIQRSEAKTRMAMFKKSLRINSTATPDQDRDKI---KQFAAQEEKRQKNER 1120
Query: 812 AGKRYKFVDAVPDIFAQIEVNEKKIRQ----KAQILAQ------KELPIDEDEEMKD 858
+ K + + D+ Q E N +++ Q K +L + KEL + +E+K+
Sbjct: 1121 MAQHQKHENQMRDLQLQCEANVRELHQLQNEKCHLLVEHETQKLKELDEEHSQELKE 1177
>gi|118150660 erythropoietin 4 immediate early response [Homo
sapiens]
Length = 426
Score = 32.0 bits (71), Expect = 2.8
Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 14/78 (17%)
Query: 797 SQQQQQQSKSK---------KNRRAGKRYKFVDAVPDIFAQIEVNEKKIRQKAQILAQKE 847
S++ +Q+ K K KN++ K+ KF+ AV Q++ ++ RQ AQ A+K+
Sbjct: 12 SKKAEQKKKEKIIEDKTFGLKNKKGAKQQKFIKAVTH---QVKFGQQNPRQVAQSEAEKK 68
Query: 848 LPIDEDEEMKDLLDFADV 865
L +D++ K+L + ++
Sbjct: 69 L--KKDDKKKELQELNEL 84
>gi|4503509 eukaryotic translation initiation factor 3, subunit 10
theta, 150/170kDa [Homo sapiens]
Length = 1382
Score = 31.6 bits (70), Expect = 3.7
Identities = 27/120 (22%), Positives = 60/120 (50%), Gaps = 15/120 (12%)
Query: 739 AAIVEQNLQHFKPVFQLLEKQILSRVRNTASFRKTAERLLRFSDKRQT-EEAIDRIFAIS 797
++++ + L+ KP L EK+ ++ TA + + + R +RQT EE +R+ +++
Sbjct: 527 SSVLAKALEVIKPAHILQEKEEQHQLAVTAYLKNSRKEHQRILARRQTIEERKERLESLN 586
Query: 798 QQQQQQSKSKKNRRAGKRYKFVDAVPDIFAQIEVNEKKIRQKAQILAQKELPIDEDEEMK 857
Q++++ ++ K K E+++RQ+A+ +KE + E E++K
Sbjct: 587 IQREKEELEQREAELQKVRK-------------AEEERLRQEAK-EREKERILQEHEQIK 632
>gi|4504063 golgin 97 [Homo sapiens]
Length = 767
Score = 31.6 bits (70), Expect = 3.7
Identities = 29/123 (23%), Positives = 56/123 (45%), Gaps = 19/123 (15%)
Query: 747 QHFKPVFQLLEKQILSRVRNTASFRKTAERLLRFSDK-----RQTEEAIDRIFAISQQQQ 801
Q F Q LE QI++ R A+ + TAE+ +R ++ ++ +R Q +
Sbjct: 406 QQFLERTQALEAQIVALERTRAADQTTAEQGMRQLEQENAALKECRNEYERSLQNHQFEL 465
Query: 802 QQSKSKKNRRA--------------GKRYKFVDAVPDIFAQIEVNEKKIRQKAQILAQKE 847
++ K + ++R +R +F ++ A I+ E+ +R+K ++L QKE
Sbjct: 466 KKLKEEWSQREIVSVAMAQALEEVRKQREEFQQQAANLTAIIDEKEQNLREKTEVLLQKE 525
Query: 848 LPI 850
I
Sbjct: 526 QEI 528
>gi|54607053 GCN1 general control of amino-acid synthesis 1-like 1
[Homo sapiens]
Length = 2671
Score = 31.6 bits (70), Expect = 3.7
Identities = 30/114 (26%), Positives = 59/114 (51%), Gaps = 10/114 (8%)
Query: 759 QILSRVRNTASFRKTAERLLRFSDKRQTEEAIDRIF--AISQQQQQQSKSKKN-RRAGKR 815
Q++S + TAS + A RL+ + + ++ +I Q QQ S K N +R K
Sbjct: 741 QLISTI--TASVQNPALRLVTREEFAIMQTPAGELYDKSIIQSAQQDSIKKANMKRENKA 798
Query: 816 YKFVDAVPDIFAQIEVNEKK-IRQKAQILA-QKEL---PIDEDEEMKDLLDFAD 864
Y F + + ++ + E+ +KK I+++ Q+ + QKE+ +D + +++ L D
Sbjct: 799 YSFKEQIIELELKEEIKKKKGIKEEVQLTSKQKEMLQAQLDREAQVRRRLQELD 852
>gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo
sapiens]
Length = 570
Score = 31.2 bits (69), Expect = 4.8
Identities = 21/86 (24%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 771 RKTAERLLRFSDK-RQTEEAIDRIFAISQQQQQQSKSKKNRRAGKRYKFVDAVPDIFAQI 829
R+ E + +K R+ EE + I +Q++++ + +K R KR + + +I
Sbjct: 333 RRQEEMMWEKEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEKRQEQEAKMWRQEEKI 392
Query: 830 EVNEKKIRQKAQILAQKELPIDEDEE 855
E+KIR++ +++ ++E + E EE
Sbjct: 393 REQEEKIREQEEMMQEQEEKMGEQEE 418
>gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 750
Score = 30.8 bits (68), Expect = 6.3
Identities = 21/89 (23%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 771 RKTAERLLRFSDK-RQTEEAIDRIFAISQQQQQQSKSKKNRRAGKRYKFVDAVPDIFAQ- 828
R+ E++ +K R+ EE I ++Q+Q+++ ++ + + K + ++ Q
Sbjct: 615 REQEEKIQEQEEKIREQEEKIREQEEMTQEQEEKMGEQEEKMCEQEEKMQEQEETMWRQE 674
Query: 829 --IEVNEKKIRQKAQILAQKELPIDEDEE 855
I EKKIR++ + + ++E + E EE
Sbjct: 675 EKIREQEKKIREQEEKIREQEEMMQEQEE 703
>gi|119372317 xin actin-binding repeat containing 2 isoform 1 [Homo
sapiens]
Length = 3549
Score = 30.8 bits (68), Expect = 6.3
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 807 KKNRRAGKRYKFVDAVP-DIFAQIEVNEKKIRQKAQILAQKELPIDEDEEMKDLLDFADV 865
K++ K K DA+P DI IE EK K +IL ++ L D + ++ L +
Sbjct: 1876 KESSHRWKESKQPDAIPGDIEKAIECLEKATNTKTEILKKELLKDDLETSLRSLKEAQRS 1935
Query: 866 TYEKHKNGGLIK 877
E HK G + K
Sbjct: 1936 FKEVHKEGVIKK 1947
>gi|116235456 ring finger protein 214 [Homo sapiens]
Length = 703
Score = 30.8 bits (68), Expect = 6.3
Identities = 23/99 (23%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
Query: 762 SRVRNTASFRKTAERLL--RFSDKRQTEEAIDRIFAISQQQQQQSKSKKNRRAGK---RY 816
S V K ++++ R K + +E +D+ + Q Q Q K + RR +
Sbjct: 214 SEVNTDQDIEKNLDKMMTERTLLKERYQEVLDKQRQVENQLQVQLKQLQQRREEEMKNHQ 273
Query: 817 KFVDAVPDIFAQIEVNEKKIRQKAQILAQKELPIDEDEE 855
+ + A+ D+ + E +KKI ++ + QKE + + E
Sbjct: 274 EILKAIQDVTIKREETKKKIEKEKKEFLQKEQDLKAEIE 312
>gi|116235451 ring finger protein 214 [Homo sapiens]
Length = 703
Score = 30.8 bits (68), Expect = 6.3
Identities = 23/99 (23%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
Query: 762 SRVRNTASFRKTAERLL--RFSDKRQTEEAIDRIFAISQQQQQQSKSKKNRRAGK---RY 816
S V K ++++ R K + +E +D+ + Q Q Q K + RR +
Sbjct: 214 SEVNTDQDIEKNLDKMMTERTLLKERYQEVLDKQRQVENQLQVQLKQLQQRREEEMKNHQ 273
Query: 817 KFVDAVPDIFAQIEVNEKKIRQKAQILAQKELPIDEDEE 855
+ + A+ D+ + E +KKI ++ + QKE + + E
Sbjct: 274 EILKAIQDVTIKREETKKKIEKEKKEFLQKEQDLKAEIE 312
>gi|4758472 G protein pathway suppressor 2 [Homo sapiens]
Length = 327
Score = 30.4 bits (67), Expect = 8.3
Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 18/124 (14%)
Query: 755 LLEKQILSRVRNTASFRKTAERLLRFSDKRQTEEAIDRIFAISQQQQQQSKSKKNRRAGK 814
LLE+ LS A R ++ KRQ EE +D++ +Q+ K ++ RR K
Sbjct: 4 LLERPKLSNAMARALHRHI---MMERERKRQEEEEVDKM------MEQKMKEEQERRKKK 54
Query: 815 RYKFVDAVPDIFAQIEVNEKKI----RQKAQILAQKELPIDEDE-----EMKDLLDFADV 865
+ ++ + QI E+K+ +K Q+ Q + + E+E E DL
Sbjct: 55 EMEERMSLEETKEQILKLEEKLLALQEEKHQLFLQLKKVLHEEEKRRRKEQSDLTTLTSA 114
Query: 866 TYEK 869
Y++
Sbjct: 115 AYQQ 118
>gi|48255883 troponin T type 2, cardiac isoform 4 [Homo sapiens]
Length = 282
Score = 30.4 bits (67), Expect = 8.3
Identities = 25/141 (17%), Positives = 62/141 (43%), Gaps = 9/141 (6%)
Query: 757 EKQILSRVRNTASFRKTAERLLRFSDKRQTEEAIDRIFA----ISQQQQQQSKSKKNRRA 812
EK+ +R+ + R+ E + D+ + ++A+ + I + Q ++ K+
Sbjct: 140 EKERQNRLAEERARREEEENRRKAEDEARKKKALSNMMHFGGYIQKAQTERKSGKRQTER 199
Query: 813 GKRYKFVDAVPDIFAQIEVNEKKIRQKAQILAQKELPIDEDEEMKDLLDFADVTYEKHKN 872
K+ K + + A +NE ++R+KA+ L Q ++ ++ D + ++
Sbjct: 200 EKKKKILAERRKVLAIDHLNEDQLREKAKELWQSIYNLEAEK-----FDLQEKFKQQKYE 254
Query: 873 GGLIKGRFGQARMVTTTHSRA 893
+++ R + V+ T +A
Sbjct: 255 INVLRNRINDNQKVSKTRGKA 275
>gi|48255879 troponin T type 2, cardiac isoform 2 [Homo sapiens]
Length = 288
Score = 30.4 bits (67), Expect = 8.3
Identities = 28/142 (19%), Positives = 64/142 (45%), Gaps = 10/142 (7%)
Query: 757 EKQILSRVRNTASFRKTAERLLRFSDKRQTEEAIDRIFA----ISQQQQQQSKS-KKNRR 811
EK+ +R+ + R+ E + D+ + ++A+ + I +Q Q + KS K+
Sbjct: 145 EKERQNRLAEERARREEEENRRKAEDEARKKKALSNMMHFGGYIQKQAQTERKSGKRQTE 204
Query: 812 AGKRYKFVDAVPDIFAQIEVNEKKIRQKAQILAQKELPIDEDEEMKDLLDFADVTYEKHK 871
K+ K + + A +NE ++R+KA+ L Q ++ ++ D + ++
Sbjct: 205 REKKKKILAERRKVLAIDHLNEDQLREKAKELWQSIYNLEAEK-----FDLQEKFKQQKY 259
Query: 872 NGGLIKGRFGQARMVTTTHSRA 893
+++ R + V+ T +A
Sbjct: 260 EINVLRNRINDNQKVSKTRGKA 281
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.136 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,695,346
Number of Sequences: 37866
Number of extensions: 1586699
Number of successful extensions: 3697
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 3632
Number of HSP's gapped (non-prelim): 92
length of query: 958
length of database: 18,247,518
effective HSP length: 112
effective length of query: 846
effective length of database: 14,006,526
effective search space: 11849520996
effective search space used: 11849520996
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.