Guide to the Human Genome
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Name: DSE Sequence: fasta or formatted (958aa) NCBI GI: 7019521
Description:

dermatan sulfate epimerase precursor

Referenced in:

Protein Glycosylation

Other entries for this name:
alt mRNA [958aa] dermatan sulfate epimerase precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         76           2
 C cysteine            1.1         11           1
 D aspartate           4.5         43           2
 E glutamate           5.2         50           2
 F phenylalanine       6.1         58           2
 G glycine             5.6         54           2
 H histidine           3.1         30           1
 I isoleucine          4.7         45           1
 K lysine              4.8         46           2
 L leucine             9.2         88           4
 M methionine          2.4         23           1
 N asparagine          4.5         43           2
 P proline             4.4         42           3
 Q glutamine           5.3         51           6
 R arginine            5.3         51           2
 S serine              7.0         67           2
 T threonine           5.2         50           3
 V valine              6.4         61           2
 W tryptophan          2.0         19           1
 Y tyrosine            5.2         50           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dermatan sulfate epimerase precursor 
DSE                   1.000   dermatan sulfate epimerase precursor 
DSEL                  0.334   dermatan sulfate epimerase-like 
ISY1                  0.005   ISY1 splicing factor homolog 
TCHH                  0.005   trichohyalin 
KTN1                  0.005   kinectin 1 isoform b 
ANKHD1                0.005   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.005   ANKHD1-EIF4EBP3 protein 
ABCF1                 0.005   ATP-binding cassette, sub-family F, member 1 isoform...
ABCF1                 0.005   ATP-binding cassette, sub-family F, member 1 isoform...
RTF1                  0.004   Paf1/RNA polymerase II complex component 
CCDC19                0.004   nasopharyngeal epithelium specific protein 1 
CCDC30                0.004   coiled-coil domain containing 30 
KTN1                  0.004   kinectin 1 isoform a 
KTN1                  0.004   kinectin 1 isoform c 
KTN1                  0.004   kinectin 1 isoform a 
OR5T3                 0.004   olfactory receptor, family 5, subfamily T, member 3 ...
SLK                   0.004   serine/threonine kinase 2 
ZC3H15                0.004   erythropoietin 4 immediate early response 
EIF3A                 0.004   eukaryotic translation initiation factor 3, subunit 1...
GOLGA1                0.004   golgin 97 
GCN1L1                0.004   GCN1 general control of amino-acid synthesis 1-like ...
LOC645202             0.003   PREDICTED: hypothetical protein LOC645202 
LOC727832             0.003   golgi autoantigen, golgin subfamily a-like 
XIRP2                 0.003   xin actin-binding repeat containing 2 isoform 1 [Ho...
RNF214                0.003   ring finger protein 214 
RNF214                0.003   ring finger protein 214 
GPS2                  0.003   G protein pathway suppressor 2 
TNNT2                 0.003   troponin T type 2, cardiac isoform 4 
TNNT2                 0.003   troponin T type 2, cardiac isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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