Search of human proteins with 124244088

Search of human proteins with 124244088

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|124244088 Bro1-domain-containing protein [Homo sapiens]
         (411 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|124244088 Bro1-domain-containing protein [Homo sapiens]            838   0.0  
gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [...    61   2e-09
gi|241982780 programmed cell death 6 interacting protein isoform...    59   6e-09
gi|22027538 programmed cell death 6 interacting protein isoform ...    59   8e-09
gi|119120915 rhophilin 1 [Homo sapiens]                                43   6e-04
gi|228008333 rhophilin, Rho GTPase binding protein 2 [Homo sapiens]    40   0.004
gi|148727245 thioredoxin domain-containing 2 isoform 1 [Homo sap...    34   0.28 
gi|148727319 thioredoxin domain-containing 2 isoform 2 [Homo sap...    34   0.28 
gi|42516570 thioredoxin domain-containing 2 isoform 1 [Homo sapi...    34   0.28 
gi|11342676 thyroid hormone receptor interactor 10 [Homo sapiens]      33   0.61 
gi|4757900 calreticulin precursor [Homo sapiens]                       32   0.80 
gi|87298937 centrosomal protein 110kDa [Homo sapiens]                  32   1.4  
gi|110349719 titin isoform N2-A [Homo sapiens]                         30   3.0  
gi|110349717 titin isoform novex-2 [Homo sapiens]                      30   3.0  
gi|110349713 titin isoform novex-1 [Homo sapiens]                      30   3.0  
gi|110349715 titin isoform N2-B [Homo sapiens]                         30   3.0  
gi|194272142 myosin IXB isoform 2 [Homo sapiens]                       30   5.2  
gi|33356170 myosin IXB isoform 1 [Homo sapiens]                        30   5.2  
gi|22749197 motile sperm domain containing 2 [Homo sapiens]            30   5.2  
gi|31543140 Usher syndrome 1C binding protein 1 [Homo sapiens]         30   5.2  
gi|4505683 platelet-derived growth factor receptor beta precurso...    29   6.8  
gi|14042947 testis-specific serine kinase 1 [Homo sapiens]             29   8.9  
gi|71999153 hypothetical protein LOC23334 [Homo sapiens]               29   8.9  

>gi|124244088 Bro1-domain-containing protein [Homo sapiens]
          Length = 411

 Score =  838 bits (2166), Expect = 0.0
 Identities = 411/411 (100%), Positives = 411/411 (100%)

Query: 1   MTHWFHRNPLKATAPVSFNYYGVVTGPSASKICNDLRSSRARLLELFTDLSCNPEMMKNA 60
           MTHWFHRNPLKATAPVSFNYYGVVTGPSASKICNDLRSSRARLLELFTDLSCNPEMMKNA
Sbjct: 1   MTHWFHRNPLKATAPVSFNYYGVVTGPSASKICNDLRSSRARLLELFTDLSCNPEMMKNA 60

Query: 61  ADSYFSLLQGFINSLDESTQESKLRYIQNFKWTDTLQGQVPSAQQDAVFELISMGFNVAL 120
           ADSYFSLLQGFINSLDESTQESKLRYIQNFKWTDTLQGQVPSAQQDAVFELISMGFNVAL
Sbjct: 61  ADSYFSLLQGFINSLDESTQESKLRYIQNFKWTDTLQGQVPSAQQDAVFELISMGFNVAL 120

Query: 121 WYTKYASRLAGKENITEDEAKEVHRSLKIAAGIFKHLKESHLPKLITPAEKGRDLESRLI 180
           WYTKYASRLAGKENITEDEAKEVHRSLKIAAGIFKHLKESHLPKLITPAEKGRDLESRLI
Sbjct: 121 WYTKYASRLAGKENITEDEAKEVHRSLKIAAGIFKHLKESHLPKLITPAEKGRDLESRLI 180

Query: 181 EAYVIQCQAEAQEVTIARAIELKHAPGLIAALAYETANFYQKADHTLSSLEPAYSAKWRK 240
           EAYVIQCQAEAQEVTIARAIELKHAPGLIAALAYETANFYQKADHTLSSLEPAYSAKWRK
Sbjct: 181 EAYVIQCQAEAQEVTIARAIELKHAPGLIAALAYETANFYQKADHTLSSLEPAYSAKWRK 240

Query: 241 YLHLKMCFYTAYAYCYHGETLLASDKCGEAIRSLQEAEKLYAKAEALCKEYGETKGPGPT 300
           YLHLKMCFYTAYAYCYHGETLLASDKCGEAIRSLQEAEKLYAKAEALCKEYGETKGPGPT
Sbjct: 241 YLHLKMCFYTAYAYCYHGETLLASDKCGEAIRSLQEAEKLYAKAEALCKEYGETKGPGPT 300

Query: 301 VKPSGHLFFRKLGNLVKNTLEKCQRENGFIYFQKIPTEAPQLELKANYGLVEPIPFEFPP 360
           VKPSGHLFFRKLGNLVKNTLEKCQRENGFIYFQKIPTEAPQLELKANYGLVEPIPFEFPP
Sbjct: 301 VKPSGHLFFRKLGNLVKNTLEKCQRENGFIYFQKIPTEAPQLELKANYGLVEPIPFEFPP 360

Query: 361 TSVQWTPETLAAFDLTKRPKDDSTKPKPEEEVKPVKEPDIKPQKDTGCYIS 411
           TSVQWTPETLAAFDLTKRPKDDSTKPKPEEEVKPVKEPDIKPQKDTGCYIS
Sbjct: 361 TSVQWTPETLAAFDLTKRPKDDSTKPKPEEEVKPVKEPDIKPQKDTGCYIS 411


>gi|24308073 protein tyrosine phosphatase, non-receptor type 23
           [Homo sapiens]
          Length = 1636

 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 67/311 (21%), Positives = 134/311 (43%), Gaps = 29/311 (9%)

Query: 92  WTDTLQGQVPSAQQDAVFELISMGFNVALWYTKYASRLAGKENITEDEAKEVHRSLKIAA 151
           WT+   G+   A +D  +E   + +N+   ++      A  + ++E+  K      + AA
Sbjct: 96  WTEIFSGK-SVAHEDIKYEQACILYNLGALHSMLG---AMDKRVSEEGMKVSCTHFQCAA 151

Query: 152 GIFKHLKESHLPKLITPAEKGRDLESRLIEAYVIQCQAEAQEVTIARAIELKHAPGLIAA 211
           G F +L+E H P+  +      D+  +++   V     +AQE  + +++       L+A 
Sbjct: 152 GAFAYLRE-HFPQAYSV-----DMSRQILTLNVNLMLGQAQECLLEKSMLDNRKSFLVAR 205

Query: 212 LAYETANFYQKADHTL-----SSLEPAYSAKWRKYLHLKMCFYTAYAYCYHGETLLASDK 266
           ++ +  ++Y++A   L     +SL       W+K + +K+ ++ A A+ + G+      K
Sbjct: 206 ISAQVVDYYKEACRALENPDTASLLGRIQKDWKKLVQMKIYYFAAVAHLHMGKQAEEQQK 265

Query: 267 CGEAIRSLQEAEKLYAKAEALCKEYGETKGPGPTVKPSGHLFFRKLGNLVKNTLEKCQRE 326
            GE +   Q A     +A  L       KG   TV+ +     R   +++       +++
Sbjct: 266 FGERVAYFQSALDKLNEAIKL------AKGQPDTVQDA----LRFTMDVIGGKYNSAKKD 315

Query: 327 NGFIYFQKIPTEAPQLELKANYGLVEPIPFEFPPTSVQWTPETLAAFDLTKRPKDDSTKP 386
           N FIY + +P     L+      LV+P+P    PT    T   + A  L      +++  
Sbjct: 316 NDFIYHEAVPA-LDTLQPVKGAPLVKPLPVN--PTDPAVTGPDIFA-KLVPMAAHEASSL 371

Query: 387 KPEEEVKPVKE 397
             EE+ K ++E
Sbjct: 372 YSEEKAKLLRE 382


>gi|241982780 programmed cell death 6 interacting protein isoform 2
           [Homo sapiens]
          Length = 873

 Score = 59.3 bits (142), Expect = 6e-09
 Identities = 82/336 (24%), Positives = 132/336 (39%), Gaps = 61/336 (18%)

Query: 72  INSLDESTQESKLRYIQNFKWTDTLQ------GQVPSAQQDAVFELISMGFNVALWYTKY 125
           I S++     S+ +    F W D         G V  A     +E   + FN A      
Sbjct: 75  ICSIEPKFPFSENQICLTFTWKDAFDKGSLFGGSVKLALASLGYEKSCVLFNCAA----L 130

Query: 126 ASRLAGKENITEDEAKEVH-RSLKIAAGIFKHLKESHLPKLITPAEKGRDLESRLIEAYV 184
           AS++A ++N+  DE  ++  +  + A+G F H+KE+ L  L    E   D+    +    
Sbjct: 131 ASQIAAEQNLDNDEGLKIAAKHYQFASGAFLHIKETVLSAL--SREPTVDISPDTVGTLS 188

Query: 185 IQCQAEAQEVTIARAIELKHAPGLIAALAYETANFYQKADHTLSSLEPAYSAKWRKYLHL 244
           +   A+AQEV   +A   K    +IA LA + A+++  A          Y     KY + 
Sbjct: 189 LIMLAQAQEVFFLKATRDKMKDAIIAKLANQAADYFGDAFKQCQ-----YKDTLPKYFYF 243

Query: 245 KMCF-YTAYAYC-------YHGETLLASD--KCGEAIRSLQEAEKLYAKAEALCKEYGET 294
           +  F   A  +C       YH +++LA    K GE I  LQ A +L     +   EY   
Sbjct: 244 QEVFPVLAAKHCIMQANAEYH-QSILAKQQKKFGEEIARLQHAAELIKTVASRYDEYVNV 302

Query: 295 KGPGPTVKPSGHLFFRKLGNLVKNTLEKCQRENGFIYFQKIPTEAPQLELKANYGLVEPI 354
           K                  + +   L   +++N FIY  ++P +   L+      LV+  
Sbjct: 303 KD---------------FSDKINRALAAAKKDNDFIYHDRVP-DLKDLDPIGKATLVKST 346

Query: 355 PFEFP-------------PTSVQWTPETLAAFDLTK 377
           P   P             P SVQ   ++LAA++  K
Sbjct: 347 PVNVPISQKFTDLFEKMVPVSVQ---QSLAAYNQRK 379


>gi|22027538 programmed cell death 6 interacting protein isoform 1
           [Homo sapiens]
          Length = 868

 Score = 58.9 bits (141), Expect = 8e-09
 Identities = 77/326 (23%), Positives = 124/326 (38%), Gaps = 46/326 (14%)

Query: 72  INSLDESTQESKLRYIQNFKWTDTLQ------GQVPSAQQDAVFELISMGFNVALWYTKY 125
           I S++     S+ +    F W D         G V  A     +E   + FN A      
Sbjct: 75  ICSIEPKFPFSENQICLTFTWKDAFDKGSLFGGSVKLALASLGYEKSCVLFNCAA----L 130

Query: 126 ASRLAGKENITEDEAKEVH-RSLKIAAGIFKHLKESHLPKLITPAEKGRDLESRLIEAYV 184
           AS++A ++N+  DE  ++  +  + A+G F H+KE+ L  L    E   D+    +    
Sbjct: 131 ASQIAAEQNLDNDEGLKIAAKHYQFASGAFLHIKETVLSAL--SREPTVDISPDTVGTLS 188

Query: 185 IQCQAEAQEVTIARAIELKHAPGLIAALAYETANFYQKADHTLSSLEPAYSAKWRKYLHL 244
           +   A+AQEV   +A   K    +IA LA + A+++  A       +     +    L  
Sbjct: 189 LIMLAQAQEVFFLKATRDKMKDAIIAKLANQAADYFGDA-FKQCQYKDTLPKEVFPVLAA 247

Query: 245 KMCFYTAYAYCYHGETLLASDKCGEAIRSLQEAEKLYAKAEALCKEYGETKGPGPTVKPS 304
           K C   A A  +         K GE I  LQ A +L     +   EY   K         
Sbjct: 248 KHCIMQANAEYHQSILAKQQKKFGEEIARLQHAAELIKTVASRYDEYVNVKD-------- 299

Query: 305 GHLFFRKLGNLVKNTLEKCQRENGFIYFQKIPTEAPQLELKANYGLVEPIPFEFP----- 359
                    + +   L   +++N FIY  ++P +   L+      LV+  P   P     
Sbjct: 300 -------FSDKINRALAAAKKDNDFIYHDRVP-DLKDLDPIGKATLVKSTPVNVPISQKF 351

Query: 360 --------PTSVQWTPETLAAFDLTK 377
                   P SVQ   ++LAA++  K
Sbjct: 352 TDLFEKMVPVSVQ---QSLAAYNQRK 374


>gi|119120915 rhophilin 1 [Homo sapiens]
          Length = 670

 Score = 42.7 bits (99), Expect = 6e-04
 Identities = 45/172 (26%), Positives = 77/172 (44%), Gaps = 10/172 (5%)

Query: 90  FKWTDTLQGQVPSAQQDAVFELISMGFNVALWYTKYASRLAGKENITEDEAKEVHRSLKI 149
           F W D+L G VP+ Q+   FE  S+ FN+   +T+  +R   ++    + A+    + + 
Sbjct: 193 FHWYDSLTG-VPAQQRALAFEKGSVLFNIGALHTQIGAR---QDRSCTEGARRAMEAFQR 248

Query: 150 AAGIFKHLKE--SHLPKLITPAEKGRDLESRLIEAYVIQCQAEAQEVTIARAIELKHAPG 207
           AAG F  L+E  SH P     A     LE +L+ A   +C  E      + A +   A  
Sbjct: 249 AAGAFSLLRENFSHAPSPDMSAASLCALE-QLMMAQAQECVFEGLSPPASMAPQDCLAQL 307

Query: 208 LIAALAYETANFYQKADHTLSS--LEPAYSAKWRKYLHLKMCFYTAYAYCYH 257
            +A  A + A  Y+    T++   +       W   +H+K  ++ + A+ YH
Sbjct: 308 RLAQEAAQVAAEYRLVHRTMAQPPVHDYVPVSWTALVHVKAEYFRSLAH-YH 358


>gi|228008333 rhophilin, Rho GTPase binding protein 2 [Homo sapiens]
          Length = 686

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 44/180 (24%), Positives = 76/180 (42%), Gaps = 29/180 (16%)

Query: 90  FKWTDTLQGQVPSAQQDAVFELISMGFNVALWYTKYASRLAGKENITEDEAKEVHRSLKI 149
           F W D+L G VP +QQ+ + E  S+ FN    YT+  +R    +  T+   +    + + 
Sbjct: 196 FTWYDSLTG-VPVSQQNLLLEKASVLFNTGALYTQIGTRC---DRQTQAGLESAIDAFQR 251

Query: 150 AAGIFKHLKE--SHLPKLITPAEKGRDLESRLIEAYVIQCQAEAQEVTIARAIELKHAPG 207
           AAG+  +LK+  +H P          D+   ++   V    A+AQE ++   I L   PG
Sbjct: 252 AAGVLNYLKDTFTHTPSY--------DMSPAMLSVLVKMMLAQAQE-SVFEKISL---PG 299

Query: 208 L---------IAALAYETANFYQKADHTLSS--LEPAYSAKWRKYLHLKMCFYTAYAYCY 256
           +         +A  A +    YQ+    +S   ++      W     +K   Y A A+ +
Sbjct: 300 IRNEFFMLVKVAQEAAKVGEVYQQLHAAMSQAPVKENIPYSWASLACVKAHHYAALAHYF 359


>gi|148727245 thioredoxin domain-containing 2 isoform 1 [Homo
           sapiens]
          Length = 486

 Score = 33.9 bits (76), Expect = 0.28
 Identities = 46/143 (32%), Positives = 66/143 (46%), Gaps = 28/143 (19%)

Query: 266 KCGEAIRSLQEAEKLYAKAEALCKEYGETKGPGPTVKPSGHLFFRKLGNLVKNTLEKCQR 325
           K G+  +SL+EA +         KE    K P  T++P       K G++ K+  E  Q 
Sbjct: 258 KEGDIPKSLEEAIQP--------KEGDIPKSPEETIQP-------KKGDIPKSPEEAIQP 302

Query: 326 ENGFIYFQKIPTEAPQ-LELKANYGLVEPIPFEFPPTSVQWTPETLAAFDLTKRPKDDST 384
           + G I   K P +A Q  E      L E IP +     +  +PE       T +PK+D +
Sbjct: 303 KEGDI--PKSPKQAIQPKEGDIPKSLEEAIPPK--EIDIPKSPEE------TIQPKEDDS 352

Query: 385 KPKPEEEVKPVKEPDI-KPQKDT 406
            PK  EE  P KE DI KP+++T
Sbjct: 353 -PKSLEEATPSKEGDILKPEEET 374


>gi|148727319 thioredoxin domain-containing 2 isoform 2 [Homo
           sapiens]
          Length = 553

 Score = 33.9 bits (76), Expect = 0.28
 Identities = 46/143 (32%), Positives = 66/143 (46%), Gaps = 28/143 (19%)

Query: 266 KCGEAIRSLQEAEKLYAKAEALCKEYGETKGPGPTVKPSGHLFFRKLGNLVKNTLEKCQR 325
           K G+  +SL+EA +         KE    K P  T++P       K G++ K+  E  Q 
Sbjct: 325 KEGDIPKSLEEAIQP--------KEGDIPKSPEETIQP-------KKGDIPKSPEEAIQP 369

Query: 326 ENGFIYFQKIPTEAPQ-LELKANYGLVEPIPFEFPPTSVQWTPETLAAFDLTKRPKDDST 384
           + G I   K P +A Q  E      L E IP +     +  +PE       T +PK+D +
Sbjct: 370 KEGDI--PKSPKQAIQPKEGDIPKSLEEAIPPK--EIDIPKSPEE------TIQPKEDDS 419

Query: 385 KPKPEEEVKPVKEPDI-KPQKDT 406
            PK  EE  P KE DI KP+++T
Sbjct: 420 -PKSLEEATPSKEGDILKPEEET 441


>gi|42516570 thioredoxin domain-containing 2 isoform 1 [Homo
           sapiens]
          Length = 486

 Score = 33.9 bits (76), Expect = 0.28
 Identities = 46/143 (32%), Positives = 66/143 (46%), Gaps = 28/143 (19%)

Query: 266 KCGEAIRSLQEAEKLYAKAEALCKEYGETKGPGPTVKPSGHLFFRKLGNLVKNTLEKCQR 325
           K G+  +SL+EA +         KE    K P  T++P       K G++ K+  E  Q 
Sbjct: 258 KEGDIPKSLEEAIQP--------KEGDIPKSPEETIQP-------KKGDIPKSPEEAIQP 302

Query: 326 ENGFIYFQKIPTEAPQ-LELKANYGLVEPIPFEFPPTSVQWTPETLAAFDLTKRPKDDST 384
           + G I   K P +A Q  E      L E IP +     +  +PE       T +PK+D +
Sbjct: 303 KEGDI--PKSPKQAIQPKEGDIPKSLEEAIPPK--EIDIPKSPEE------TIQPKEDDS 352

Query: 385 KPKPEEEVKPVKEPDI-KPQKDT 406
            PK  EE  P KE DI KP+++T
Sbjct: 353 -PKSLEEATPSKEGDILKPEEET 374


>gi|11342676 thyroid hormone receptor interactor 10 [Homo sapiens]
          Length = 545

 Score = 32.7 bits (73), Expect = 0.61
 Identities = 32/124 (25%), Positives = 47/124 (37%), Gaps = 13/124 (10%)

Query: 272 RSLQEAEKLYAKAEALCKEYGETKGPGPTVKPSGHL---FFRKLGNLVKNTLEKCQRENG 328
           R  +EAEK    AE L ++   TK      K   HL      +  N     L++  R+  
Sbjct: 143 RDCREAEKAAQTAERLDQDINATKADVEKAKQQAHLRSHMAEESKNEYAAQLQRFNRDQA 202

Query: 329 FIYFQKIPTEAPQLE---------LKANYGLVEPIPFEFPPTSVQWTPETLAAFDLTKRP 379
             YF ++P    +L+         L A YGL+     E  P   +       A +    P
Sbjct: 203 HFYFSQMPQIFDKLQDMDERRATRLGAGYGLLSEAELEVVPIIAKCLEGMKVAANAVD-P 261

Query: 380 KDDS 383
           K+DS
Sbjct: 262 KNDS 265


>gi|4757900 calreticulin precursor [Homo sapiens]
          Length = 417

 Score = 32.3 bits (72), Expect = 0.80
 Identities = 36/127 (28%), Positives = 53/127 (41%), Gaps = 12/127 (9%)

Query: 290 EYGETKGP---GPTVKPSGHLFFRKLGNLVKNTLEKCQRENGFIYFQKIPTEAPQLELKA 346
           EY    GP   GP  K    +F  K  N++ N   +C+ +     +  I       E+K 
Sbjct: 127 EYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKI 186

Query: 347 NYGLVEPIPFE-----FPPTSVQWTPETLAAFDLTKRPK-DDSTKPKPEEEVKP--VKEP 398
           +   VE    E      PP  ++  P+     D  +R K DD T  KPE+  KP  + +P
Sbjct: 187 DNSQVESGSLEDDWDFLPPKKIK-DPDASKPEDWDERAKIDDPTDSKPEDWDKPEHIPDP 245

Query: 399 DIKPQKD 405
           D K  +D
Sbjct: 246 DAKKPED 252


>gi|87298937 centrosomal protein 110kDa [Homo sapiens]
          Length = 2325

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 37/172 (21%), Positives = 75/172 (43%), Gaps = 15/172 (8%)

Query: 34   NDLRSSRARLLELFTDLSCNPEMMKNAADSYF----SLLQ--GFINSLDESTQESKLRYI 87
            ++LR +   L E  ++LSC  E  KNA + +     SLLQ       L+   QE+ +  +
Sbjct: 1433 SELREADRLLAEAESELSCTKEKTKNAVEKFTDAKRSLLQTESDAEELERRAQETAVNLV 1492

Query: 88   QNFKWTDTLQGQVPSAQQDAVFE---LISMGFNVALWYTKYASRLAGKENITEDEAKEVH 144
            +  +   +LQ      +Q  + +   L  +   VA   + +      KE +TE E +++ 
Sbjct: 1493 KADQQLRSLQADAKDLEQHKIKQEEILKEINKIVAAKDSDFQCLSKKKEKLTE-ELQKLQ 1551

Query: 145  RSLKIAAGIFKHLKESHLPKLITPAEKGRDLESRLIEAYVIQCQAEAQEVTI 196
            + +++A        E H  +++  +E     +   +E    Q  ++ QE+ +
Sbjct: 1552 KDIEMA-----ERNEDHHLQVLKESEVLLQAKRAELEKLKSQVTSQQQEMAV 1598


>gi|110349719 titin isoform N2-A [Homo sapiens]
          Length = 33423

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 6/55 (10%)

Query: 352   EPIPFEFPPTSVQWTPETLAAFDLTKRPKDDSTKPKPEEEVKPV--KEPDIKPQK 404
             E +  E PP  V   PE  A   +T  PK    KP PE++   V  K+P++ P K
Sbjct: 10670 EEVALEEPPAEVVEEPEPAAPPQVTVPPK----KPVPEKKAPAVVAKKPELPPVK 10720



 Score = 30.4 bits (67), Expect = 3.0
 Identities = 11/19 (57%), Positives = 15/19 (78%)

Query: 385   KPKPEEEVKPVKEPDIKPQ 403
             KPKPE EVK +K P ++P+
Sbjct: 11022 KPKPEAEVKTIKPPPVEPE 11040


>gi|110349717 titin isoform novex-2 [Homo sapiens]
          Length = 27118

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 11/19 (57%), Positives = 15/19 (78%)

Query: 385  KPKPEEEVKPVKEPDIKPQ 403
            KPKPE EVK +K P ++P+
Sbjct: 4717 KPKPEAEVKTIKPPPVEPE 4735


>gi|110349713 titin isoform novex-1 [Homo sapiens]
          Length = 27051

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 11/19 (57%), Positives = 15/19 (78%)

Query: 385  KPKPEEEVKPVKEPDIKPQ 403
            KPKPE EVK +K P ++P+
Sbjct: 4650 KPKPEAEVKTIKPPPVEPE 4668


>gi|110349715 titin isoform N2-B [Homo sapiens]
          Length = 26926

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 11/19 (57%), Positives = 15/19 (78%)

Query: 385  KPKPEEEVKPVKEPDIKPQ 403
            KPKPE EVK +K P ++P+
Sbjct: 4525 KPKPEAEVKTIKPPPVEPE 4543


>gi|194272142 myosin IXB isoform 2 [Homo sapiens]
          Length = 2022

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 2/76 (2%)

Query: 333  QKIPTEAPQLEL--KANYGLVEPIPFEFPPTSVQWTPETLAAFDLTKRPKDDSTKPKPEE 390
            QK PTE PQ     K +    + +P   P       P +LA       P   S    PE+
Sbjct: 1215 QKQPTEQPQAMAVGKVSEETEKTLPSGSPRPGQLERPTSLALDSRVSPPAPGSAPETPED 1274

Query: 391  EVKPVKEPDIKPQKDT 406
            + KP   P ++ + D+
Sbjct: 1275 KSKPCGSPRVQEKPDS 1290


>gi|33356170 myosin IXB isoform 1 [Homo sapiens]
          Length = 2157

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 2/76 (2%)

Query: 333  QKIPTEAPQLEL--KANYGLVEPIPFEFPPTSVQWTPETLAAFDLTKRPKDDSTKPKPEE 390
            QK PTE PQ     K +    + +P   P       P +LA       P   S    PE+
Sbjct: 1215 QKQPTEQPQAMAVGKVSEETEKTLPSGSPRPGQLERPTSLALDSRVSPPAPGSAPETPED 1274

Query: 391  EVKPVKEPDIKPQKDT 406
            + KP   P ++ + D+
Sbjct: 1275 KSKPCGSPRVQEKPDS 1290


>gi|22749197 motile sperm domain containing 2 [Homo sapiens]
          Length = 518

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 21/73 (28%), Positives = 32/73 (43%)

Query: 269 EAIRSLQEAEKLYAKAEALCKEYGETKGPGPTVKPSGHLFFRKLGNLVKNTLEKCQRENG 328
           E+    +E EK+ +K +A  K     KGP   + P+  L+F    +  K TL        
Sbjct: 298 ESTSKAEENEKVDSKVKAFKKPLSVFKGPLLHISPAEELYFGSTESGEKKTLIVLTNVTK 357

Query: 329 FIYFQKIPTEAPQ 341
            I   K+ T AP+
Sbjct: 358 NIVAFKVRTTAPE 370


>gi|31543140 Usher syndrome 1C binding protein 1 [Homo sapiens]
          Length = 703

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 24/59 (40%), Positives = 29/59 (49%), Gaps = 11/59 (18%)

Query: 189 AEAQEVTIARAIELKHAPGLIAALAYETA--------NFYQKADHTLSSLEPAYSAKWR 239
           A A EV    A+E   AP   AAL Y+          + +Q   HTLSSLE A +A WR
Sbjct: 82  ASAPEVPHKPAVEAHQAPE--AALQYKETVPPGNGAPDVFQTLQHTLSSLEAA-AAAWR 137


>gi|4505683 platelet-derived growth factor receptor beta precursor
            [Homo sapiens]
          Length = 1106

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 2/74 (2%)

Query: 335  IPTEAPQLELKANYGLVEPIPFEFPPTSVQWTPETLAAFDLTKRPKDDSTKPKPEEEVKP 394
            IP   P+ E+ A+ G +E  P     T  +    +  + D    P+D+  +P+P+ E++ 
Sbjct: 1023 IPLPDPKPEV-ADEGPLEGSPSLASSTLNEVNTSSTISCDSPLEPQDEP-EPEPQLELQV 1080

Query: 395  VKEPDIKPQKDTGC 408
              EP+++   D+GC
Sbjct: 1081 EPEPELEQLPDSGC 1094


>gi|14042947 testis-specific serine kinase 1 [Homo sapiens]
          Length = 367

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 7/43 (16%)

Query: 361 TSVQWTPETLAAFDLTKRPKDDSTKPKPEEEVKPVKEPDIKPQ 403
           T   WTPE  +        K  +TK +PE E +P  +P+ KP+
Sbjct: 294 TEPLWTPEPGS-------DKKSATKLEPEGEAQPQAQPETKPE 329


>gi|71999153 hypothetical protein LOC23334 [Homo sapiens]
          Length = 2533

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 3/52 (5%)

Query: 271  IRSLQEAEKLYAKAEALCKEYGETKGPGPTVKPSGHLFFRKLGNLVKNTLEK 322
            +R LQ+  ++YA A +L +E G   GPG   +    L  R++G + +   ++
Sbjct: 1022 VRVLQDRVEVYAHARSLIREDG---GPGTECRHLQQLLVRRVGEICREVNQR 1070


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.132    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,472,011
Number of Sequences: 37866
Number of extensions: 751256
Number of successful extensions: 2319
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 2271
Number of HSP's gapped (non-prelim): 59
length of query: 411
length of database: 18,247,518
effective HSP length: 105
effective length of query: 306
effective length of database: 14,271,588
effective search space: 4367105928
effective search space used: 4367105928
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.