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Search of human proteins with 12408687
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|12408687 chorionic somatomammotropin hormone 1 isoform 3
[Homo sapiens]
(122 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|12408687 chorionic somatomammotropin hormone 1 isoform 3 [Hom... 251 7e-68
gi|12408694 chorionic somatomammotropin hormone 2 isoform 3 [Hom... 248 6e-67
gi|13027818 growth hormone 1 isoform 4 [Homo sapiens] 221 8e-59
gi|13027816 growth hormone 1 isoform 3 [Homo sapiens] 167 1e-42
gi|239756908 PREDICTED: similar to chorionic somatomammotropin h... 139 7e-34
gi|4503083 chorionic somatomammotropin hormone 1 isoform 1 [Homo... 139 7e-34
gi|10334861 chorionic somatomammotropin hormone 2 isoform 1 [Hom... 139 7e-34
gi|12545381 chorionic somatomammotropin hormone-like 1 isoform 2... 130 2e-31
gi|12545378 chorionic somatomammotropin hormone-like 1 isoform 4... 130 2e-31
gi|12545376 chorionic somatomammotropin hormone-like 1 isoform 1... 130 2e-31
gi|38201628 chorionic somatomammotropin hormone-like 1 isoform 3... 130 2e-31
gi|13027812 growth hormone 1 isoform 1 [Homo sapiens] 129 4e-31
gi|13027814 growth hormone 1 isoform 2 [Homo sapiens] 129 4e-31
gi|4503991 growth hormone 2 isoform 1 [Homo sapiens] 125 8e-30
gi|13027822 growth hormone 2 isoform 4 [Homo sapiens] 125 8e-30
gi|12408685 chorionic somatomammotropin hormone 1 isoform 2 [Hom... 117 2e-27
gi|12408692 chorionic somatomammotropin hormone 2 isoform 2 [Hom... 114 2e-26
gi|13027826 growth hormone 2 isoform 3 [Homo sapiens] 88 2e-18
gi|13027824 growth hormone 2 isoform 2 [Homo sapiens] 88 2e-18
gi|4506105 prolactin precursor [Homo sapiens] 34 0.031
gi|209364544 calsyntenin 2 [Homo sapiens] 30 0.58
gi|164698517 MAM domain containing 1 isoform 1 [Homo sapiens] 30 0.58
gi|38158013 MAM domain containing 1 isoform 2 [Homo sapiens] 30 0.58
gi|73611906 phosphorylase kinase, beta isoform b [Homo sapiens] 28 1.7
gi|4505783 phosphorylase kinase, beta isoform a [Homo sapiens] 28 1.7
gi|239758055 PREDICTED: similar to tektin 4 [Homo sapiens] 27 2.9
gi|239752581 PREDICTED: MAFF interacting protein [Homo sapiens] 27 2.9
gi|112293285 spindlin [Homo sapiens] 27 2.9
gi|110735445 forkhead box F1 [Homo sapiens] 27 3.8
gi|239753543 PREDICTED: similar to hCG2041108 [Homo sapiens] 26 6.5
>gi|12408687 chorionic somatomammotropin hormone 1 isoform 3 [Homo
sapiens]
Length = 122
Score = 251 bits (642), Expect = 7e-68
Identities = 122/122 (100%), Positives = 122/122 (100%)
Query: 1 MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFRLE 60
MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFRLE
Sbjct: 1 MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFRLE 60
Query: 61 DGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVEGSC 120
DGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVEGSC
Sbjct: 61 DGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVEGSC 120
Query: 121 GF 122
GF
Sbjct: 121 GF 122
>gi|12408694 chorionic somatomammotropin hormone 2 isoform 3 [Homo
sapiens]
Length = 122
Score = 248 bits (634), Expect = 6e-67
Identities = 121/122 (99%), Positives = 121/122 (99%)
Query: 1 MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFRLE 60
MA GSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFRLE
Sbjct: 1 MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFRLE 60
Query: 61 DGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVEGSC 120
DGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVEGSC
Sbjct: 61 DGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVEGSC 120
Query: 121 GF 122
GF
Sbjct: 121 GF 122
>gi|13027818 growth hormone 1 isoform 4 [Homo sapiens]
Length = 122
Score = 221 bits (564), Expect = 8e-59
Identities = 107/122 (87%), Positives = 111/122 (90%)
Query: 1 MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFRLE 60
MA GSRTSLLLAF LLCLPWLQE A T+PLSRLFD+AML+AHR HQLA DTYQEFRLE
Sbjct: 1 MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEFRLE 60
Query: 61 DGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVEGSC 120
DGS RTGQI KQTYSKFDTNSHN DALLKNYGLLYCFRKDMDKVETFLR+VQCRSVEGSC
Sbjct: 61 DGSPRTGQIFKQTYSKFDTNSHNDDALLKNYGLLYCFRKDMDKVETFLRIVQCRSVEGSC 120
Query: 121 GF 122
GF
Sbjct: 121 GF 122
>gi|13027816 growth hormone 1 isoform 3 [Homo sapiens]
Length = 177
Score = 167 bits (424), Expect = 1e-42
Identities = 98/177 (55%), Positives = 104/177 (58%), Gaps = 55/177 (31%)
Query: 1 MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAM------------------LQ 42
MA GSRTSLLLAF LLCLPWLQE A T+PLSRLFD+AM L+
Sbjct: 1 MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEFNLE 60
Query: 43 AHRAHQLAIDTYQE-------------------------------------FRLEDGSRR 65
R L I ++ E RLEDGS R
Sbjct: 61 LLRISLLLIQSWLEPVQFLRSVFANSLVYGASDSNVYDLLKDLEEGIQTLMGRLEDGSPR 120
Query: 66 TGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVEGSCGF 122
TGQI KQTYSKFDTNSHN DALLKNYGLLYCFRKDMDKVETFLR+VQCRSVEGSCGF
Sbjct: 121 TGQIFKQTYSKFDTNSHNDDALLKNYGLLYCFRKDMDKVETFLRIVQCRSVEGSCGF 177
>gi|239756908 PREDICTED: similar to chorionic somatomammotropin
hormone 2 [Homo sapiens]
Length = 96
Score = 139 bits (349), Expect = 7e-34
Identities = 65/65 (100%), Positives = 65/65 (100%)
Query: 58 RLEDGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVE 117
RLEDGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVE
Sbjct: 32 RLEDGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVE 91
Query: 118 GSCGF 122
GSCGF
Sbjct: 92 GSCGF 96
>gi|4503083 chorionic somatomammotropin hormone 1 isoform 1 [Homo
sapiens]
Length = 217
Score = 139 bits (349), Expect = 7e-34
Identities = 65/65 (100%), Positives = 65/65 (100%)
Query: 58 RLEDGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVE 117
RLEDGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVE
Sbjct: 153 RLEDGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVE 212
Query: 118 GSCGF 122
GSCGF
Sbjct: 213 GSCGF 217
Score = 117 bits (293), Expect = 2e-27
Identities = 57/57 (100%), Positives = 57/57 (100%)
Query: 1 MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEF 57
MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEF
Sbjct: 1 MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEF 57
>gi|10334861 chorionic somatomammotropin hormone 2 isoform 1 [Homo
sapiens]
Length = 217
Score = 139 bits (349), Expect = 7e-34
Identities = 65/65 (100%), Positives = 65/65 (100%)
Query: 58 RLEDGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVE 117
RLEDGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVE
Sbjct: 153 RLEDGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVE 212
Query: 118 GSCGF 122
GSCGF
Sbjct: 213 GSCGF 217
Score = 114 bits (285), Expect = 2e-26
Identities = 56/57 (98%), Positives = 56/57 (98%)
Query: 1 MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEF 57
MA GSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEF
Sbjct: 1 MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEF 57
>gi|12545381 chorionic somatomammotropin hormone-like 1 isoform 2
precursor [Homo sapiens]
Length = 199
Score = 130 bits (327), Expect = 2e-31
Identities = 61/65 (93%), Positives = 62/65 (95%)
Query: 58 RLEDGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVE 117
RLEDGS TGQ LKQTYSKFDTNSHNHDALLKNYGLL+CFRKDMDKVETFLRMVQCRSVE
Sbjct: 135 RLEDGSHLTGQTLKQTYSKFDTNSHNHDALLKNYGLLHCFRKDMDKVETFLRMVQCRSVE 194
Query: 118 GSCGF 122
GSCGF
Sbjct: 195 GSCGF 199
Score = 108 bits (270), Expect = 1e-24
Identities = 54/57 (94%), Positives = 54/57 (94%)
Query: 1 MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEF 57
MA GSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLF AMLQAHRAHQLAIDTYQEF
Sbjct: 1 MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFKEAMLQAHRAHQLAIDTYQEF 57
>gi|12545378 chorionic somatomammotropin hormone-like 1 isoform 4
[Homo sapiens]
Length = 139
Score = 130 bits (327), Expect = 2e-31
Identities = 61/65 (93%), Positives = 62/65 (95%)
Query: 58 RLEDGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVE 117
RLEDGS TGQ LKQTYSKFDTNSHNHDALLKNYGLL+CFRKDMDKVETFLRMVQCRSVE
Sbjct: 75 RLEDGSHLTGQTLKQTYSKFDTNSHNHDALLKNYGLLHCFRKDMDKVETFLRMVQCRSVE 134
Query: 118 GSCGF 122
GSCGF
Sbjct: 135 GSCGF 139
>gi|12545376 chorionic somatomammotropin hormone-like 1 isoform 1
precursor [Homo sapiens]
Length = 222
Score = 130 bits (327), Expect = 2e-31
Identities = 61/65 (93%), Positives = 62/65 (95%)
Query: 58 RLEDGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVE 117
RLEDGS TGQ LKQTYSKFDTNSHNHDALLKNYGLL+CFRKDMDKVETFLRMVQCRSVE
Sbjct: 158 RLEDGSHLTGQTLKQTYSKFDTNSHNHDALLKNYGLLHCFRKDMDKVETFLRMVQCRSVE 217
Query: 118 GSCGF 122
GSCGF
Sbjct: 218 GSCGF 222
Score = 108 bits (270), Expect = 1e-24
Identities = 54/57 (94%), Positives = 54/57 (94%)
Query: 1 MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEF 57
MA GSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLF AMLQAHRAHQLAIDTYQEF
Sbjct: 1 MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFKEAMLQAHRAHQLAIDTYQEF 57
>gi|38201628 chorionic somatomammotropin hormone-like 1 isoform 3
[Homo sapiens]
Length = 128
Score = 130 bits (327), Expect = 2e-31
Identities = 61/65 (93%), Positives = 62/65 (95%)
Query: 58 RLEDGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVE 117
RLEDGS TGQ LKQTYSKFDTNSHNHDALLKNYGLL+CFRKDMDKVETFLRMVQCRSVE
Sbjct: 64 RLEDGSHLTGQTLKQTYSKFDTNSHNHDALLKNYGLLHCFRKDMDKVETFLRMVQCRSVE 123
Query: 118 GSCGF 122
GSCGF
Sbjct: 124 GSCGF 128
>gi|13027812 growth hormone 1 isoform 1 [Homo sapiens]
Length = 217
Score = 129 bits (325), Expect = 4e-31
Identities = 61/65 (93%), Positives = 62/65 (95%)
Query: 58 RLEDGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVE 117
RLEDGS RTGQI KQTYSKFDTNSHN DALLKNYGLLYCFRKDMDKVETFLR+VQCRSVE
Sbjct: 153 RLEDGSPRTGQIFKQTYSKFDTNSHNDDALLKNYGLLYCFRKDMDKVETFLRIVQCRSVE 212
Query: 118 GSCGF 122
GSCGF
Sbjct: 213 GSCGF 217
Score = 96.7 bits (239), Expect = 4e-21
Identities = 46/57 (80%), Positives = 49/57 (85%)
Query: 1 MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEF 57
MA GSRTSLLLAF LLCLPWLQE A T+PLSRLFD+AML+AHR HQLA DTYQEF
Sbjct: 1 MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEF 57
>gi|13027814 growth hormone 1 isoform 2 [Homo sapiens]
Length = 202
Score = 129 bits (325), Expect = 4e-31
Identities = 61/65 (93%), Positives = 62/65 (95%)
Query: 58 RLEDGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVE 117
RLEDGS RTGQI KQTYSKFDTNSHN DALLKNYGLLYCFRKDMDKVETFLR+VQCRSVE
Sbjct: 138 RLEDGSPRTGQIFKQTYSKFDTNSHNDDALLKNYGLLYCFRKDMDKVETFLRIVQCRSVE 197
Query: 118 GSCGF 122
GSCGF
Sbjct: 198 GSCGF 202
Score = 96.7 bits (239), Expect = 4e-21
Identities = 46/57 (80%), Positives = 49/57 (85%)
Query: 1 MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEF 57
MA GSRTSLLLAF LLCLPWLQE A T+PLSRLFD+AML+AHR HQLA DTYQEF
Sbjct: 1 MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEF 57
>gi|4503991 growth hormone 2 isoform 1 [Homo sapiens]
Length = 217
Score = 125 bits (314), Expect = 8e-30
Identities = 70/122 (57%), Positives = 82/122 (67%), Gaps = 5/122 (4%)
Query: 5 SRTSLLLAFALLCLPWLQEAGAVQTVPLSRLF----DHAMLQAHRAHQLAIDTYQEFRLE 60
S LL LL WL+ +++V + L D + + + + I T +RLE
Sbjct: 97 SNLELLRISLLLIQSWLEPVQLLRSVFANSLVYGASDSNVYRHLKDLEEGIQTLM-WRLE 155
Query: 61 DGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVEGSC 120
DGS RTGQI Q+YSKFDT SHN DALLKNYGLLYCFRKDMDKVETFLR+VQCRSVEGSC
Sbjct: 156 DGSPRTGQIFNQSYSKFDTKSHNDDALLKNYGLLYCFRKDMDKVETFLRIVQCRSVEGSC 215
Query: 121 GF 122
GF
Sbjct: 216 GF 217
Score = 87.8 bits (216), Expect = 2e-18
Identities = 43/57 (75%), Positives = 47/57 (82%)
Query: 1 MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEF 57
MA GSRTSLLLAF LLCL WLQE A T+PLSRLFD+AML+A R +QLA DTYQEF
Sbjct: 1 MAAGSRTSLLLAFGLLCLSWLQEGSAFPTIPLSRLFDNAMLRARRLYQLAYDTYQEF 57
>gi|13027822 growth hormone 2 isoform 4 [Homo sapiens]
Length = 202
Score = 125 bits (314), Expect = 8e-30
Identities = 70/122 (57%), Positives = 82/122 (67%), Gaps = 5/122 (4%)
Query: 5 SRTSLLLAFALLCLPWLQEAGAVQTVPLSRLF----DHAMLQAHRAHQLAIDTYQEFRLE 60
S LL LL WL+ +++V + L D + + + + I T +RLE
Sbjct: 82 SNLELLRISLLLIQSWLEPVQLLRSVFANSLVYGASDSNVYRHLKDLEEGIQTLM-WRLE 140
Query: 61 DGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVEGSC 120
DGS RTGQI Q+YSKFDT SHN DALLKNYGLLYCFRKDMDKVETFLR+VQCRSVEGSC
Sbjct: 141 DGSPRTGQIFNQSYSKFDTKSHNDDALLKNYGLLYCFRKDMDKVETFLRIVQCRSVEGSC 200
Query: 121 GF 122
GF
Sbjct: 201 GF 202
Score = 87.8 bits (216), Expect = 2e-18
Identities = 43/57 (75%), Positives = 47/57 (82%)
Query: 1 MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEF 57
MA GSRTSLLLAF LLCL WLQE A T+PLSRLFD+AML+A R +QLA DTYQEF
Sbjct: 1 MAAGSRTSLLLAFGLLCLSWLQEGSAFPTIPLSRLFDNAMLRARRLYQLAYDTYQEF 57
>gi|12408685 chorionic somatomammotropin hormone 1 isoform 2 [Homo
sapiens]
Length = 256
Score = 117 bits (293), Expect = 2e-27
Identities = 57/57 (100%), Positives = 57/57 (100%)
Query: 1 MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEF 57
MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEF
Sbjct: 1 MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEF 57
>gi|12408692 chorionic somatomammotropin hormone 2 isoform 2 [Homo
sapiens]
Length = 167
Score = 114 bits (285), Expect = 2e-26
Identities = 56/57 (98%), Positives = 56/57 (98%)
Query: 1 MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEF 57
MA GSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEF
Sbjct: 1 MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEF 57
>gi|13027826 growth hormone 2 isoform 3 [Homo sapiens]
Length = 245
Score = 87.8 bits (216), Expect = 2e-18
Identities = 43/57 (75%), Positives = 47/57 (82%)
Query: 1 MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEF 57
MA GSRTSLLLAF LLCL WLQE A T+PLSRLFD+AML+A R +QLA DTYQEF
Sbjct: 1 MAAGSRTSLLLAFGLLCLSWLQEGSAFPTIPLSRLFDNAMLRARRLYQLAYDTYQEF 57
>gi|13027824 growth hormone 2 isoform 2 [Homo sapiens]
Length = 256
Score = 87.8 bits (216), Expect = 2e-18
Identities = 43/57 (75%), Positives = 47/57 (82%)
Query: 1 MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEF 57
MA GSRTSLLLAF LLCL WLQE A T+PLSRLFD+AML+A R +QLA DTYQEF
Sbjct: 1 MAAGSRTSLLLAFGLLCLSWLQEGSAFPTIPLSRLFDNAMLRARRLYQLAYDTYQEF 57
>gi|4506105 prolactin precursor [Homo sapiens]
Length = 227
Score = 33.9 bits (76), Expect = 0.031
Identities = 10/29 (34%), Positives = 21/29 (72%)
Query: 91 YGLLYCFRKDMDKVETFLRMVQCRSVEGS 119
Y LL+C R+D K++ +L++++CR + +
Sbjct: 197 YNLLHCLRRDSHKIDNYLKLLKCRIIHNN 225
Score = 31.2 bits (69), Expect = 0.20
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Query: 4 GSRTSLLLAFALLC-----LPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEF 57
GS LL++ LLC LP A V L LFD A++ +H H L+ + + EF
Sbjct: 10 GSLLLLLVSNLLLCQSVAPLPICPGGAARCQVTLRDLFDRAVVLSHYIHNLSSEMFSEF 68
>gi|209364544 calsyntenin 2 [Homo sapiens]
Length = 955
Score = 29.6 bits (65), Expect = 0.58
Identities = 15/60 (25%), Positives = 27/60 (45%)
Query: 48 QLAIDTYQEFRLEDGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETF 107
Q I + + G R + + K + N H++ + N L++ RKD D+ +TF
Sbjct: 378 QFTITMWMKHGPSPGVRAEKETILCNSDKTEMNRHHYALYVHNCRLVFLLRKDFDQADTF 437
>gi|164698517 MAM domain containing 1 isoform 1 [Homo sapiens]
Length = 956
Score = 29.6 bits (65), Expect = 0.58
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 45 RAHQLAIDTYQEFRLEDGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYC 96
RA+ + + TY E+RL + RTGQ Q Y+++ S +++ NYG+ C
Sbjct: 565 RAYPIRVLTY-EWRLGNKLLRTGQFDSQEYTEYAVKSLSNE----NYGVYNC 611
>gi|38158013 MAM domain containing 1 isoform 2 [Homo sapiens]
Length = 727
Score = 29.6 bits (65), Expect = 0.58
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 45 RAHQLAIDTYQEFRLEDGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYC 96
RA+ + + TY E+RL + RTGQ Q Y+++ S +++ NYG+ C
Sbjct: 336 RAYPIRVLTY-EWRLGNKLLRTGQFDSQEYTEYAVKSLSNE----NYGVYNC 382
>gi|73611906 phosphorylase kinase, beta isoform b [Homo sapiens]
Length = 1086
Score = 28.1 bits (61), Expect = 1.7
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 79 TNSHNHDALLKNYGLLYCFRKDMDKVETF 107
T+ H A+ G+LYC+ + DKV+ F
Sbjct: 104 THELEHSAIKCMRGILYCYMRQADKVQQF 132
>gi|4505783 phosphorylase kinase, beta isoform a [Homo sapiens]
Length = 1093
Score = 28.1 bits (61), Expect = 1.7
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 79 TNSHNHDALLKNYGLLYCFRKDMDKVETF 107
T+ H A+ G+LYC+ + DKV+ F
Sbjct: 111 THELEHSAIKCMRGILYCYMRQADKVQQF 139
>gi|239758055 PREDICTED: similar to tektin 4 [Homo sapiens]
Length = 254
Score = 27.3 bits (59), Expect = 2.9
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 41 LQAHRAHQLAIDTYQ--EFRLEDGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFR 98
LQ H + QLA +T + +D +RR G+ L+ T+S +AL LL +
Sbjct: 39 LQGHESQQLAAETQALAQGTQQDSTRRVGEQLQDTHSWKSELQREVEALAAETDLLLAQK 98
Query: 99 KDMD 102
+ ++
Sbjct: 99 QRLE 102
>gi|239752581 PREDICTED: MAFF interacting protein [Homo sapiens]
Length = 333
Score = 27.3 bits (59), Expect = 2.9
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 41 LQAHRAHQLAIDTYQ--EFRLEDGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFR 98
LQ H + QLA +T + +D +RR G+ L+ T+S +AL LL +
Sbjct: 55 LQGHESQQLAAETQALAQGTQQDSTRRVGEQLQDTHSWKSELQREVEALAAETDLLLAQK 114
Query: 99 KDMD 102
+ ++
Sbjct: 115 QRLE 118
>gi|112293285 spindlin [Homo sapiens]
Length = 262
Score = 27.3 bits (59), Expect = 2.9
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 7/34 (20%)
Query: 56 EFRLEDGSRRTGQILKQT-------YSKFDTNSH 82
E+ EDGS+RTG ++ Q + KFD + H
Sbjct: 219 EYAKEDGSKRTGMVIHQVEAKPSVYFIKFDDDFH 252
>gi|110735445 forkhead box F1 [Homo sapiens]
Length = 379
Score = 26.9 bits (58), Expect = 3.8
Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 8/48 (16%)
Query: 45 RAHQLAIDTYQEFRLEDGS--------RRTGQILKQTYSKFDTNSHNH 84
+ H ID EF E+GS RR Q LK YS + NH
Sbjct: 118 KGHYWTIDPASEFMFEEGSFRRRPRGFRRKCQALKPMYSMMNGLGFNH 165
>gi|239753543 PREDICTED: similar to hCG2041108 [Homo sapiens]
Length = 299
Score = 26.2 bits (56), Expect = 6.5
Identities = 16/27 (59%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 1 MAPGSRTSL-LLAFALLCLPWLQEAGA 26
MA S +SL LLA+ LL PWL+EA A
Sbjct: 1 MASQSGSSLGLLAWFLLLQPWLEEARA 27
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.326 0.137 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,264,247
Number of Sequences: 37866
Number of extensions: 143748
Number of successful extensions: 511
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 476
Number of HSP's gapped (non-prelim): 50
length of query: 122
length of database: 18,247,518
effective HSP length: 89
effective length of query: 33
effective length of database: 14,877,444
effective search space: 490955652
effective search space used: 490955652
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.