Guide to the Human Genome
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Name: GH2 Sequence: fasta or formatted (245aa) NCBI GI: 13027826
Description:

growth hormone 2 isoform 3

Referenced in:

Growth Hormone and Related Hormones
Ovary, Uterus and Placenta

Other entries for this name:
alt prot [202aa] growth hormone 2 isoform 4
alt prot [256aa] growth hormone 2 isoform 2
alt prot [217aa] growth hormone 2 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.6         21           2
 C cysteine            3.7          9           1
 D aspartate           1.6          4           1
 E glutamate           4.1         10           2
 F phenylalanine       2.9          7           1
 G glycine             4.9         12           2
 H histidine           1.2          3           1
 I isoleucine          3.7          9           1
 K lysine              2.9          7           1
 L leucine            14.3         35           3
 M methionine          1.6          4           1
 N asparagine          2.9          7           1
 P proline             5.7         14           2
 Q glutamine           5.7         14           2
 R arginine            6.5         16           2
 S serine             13.5         33           2
 T threonine           7.3         18           2
 V valine              3.3          8           1
 W tryptophan          2.9          7           1
 Y tyrosine            2.9          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   growth hormone 2 isoform 3 
GH2                   0.590   growth hormone 2 isoform 2 
GH2                   0.575   growth hormone 2 isoform 1 
GH1                   0.529   growth hormone 1 isoform 1 
GH2                   0.495   growth hormone 2 isoform 4 
GH1                   0.452   growth hormone 1 isoform 2 
CSH2                  0.437   chorionic somatomammotropin hormone 2 isoform 2 [Hom...
CSH1                  0.433   chorionic somatomammotropin hormone 1 isoform 2 [Hom...
CSH2                  0.431   chorionic somatomammotropin hormone 2 isoform 1 [Hom...
CSH1                  0.427   chorionic somatomammotropin hormone 1 isoform 1 [Homo...
CSHL1                 0.382   chorionic somatomammotropin hormone-like 1 isoform 1...
GH1                   0.333   growth hormone 1 isoform 3 
CSHL1                 0.295   chorionic somatomammotropin hormone-like 1 isoform 2...
GH1                   0.174   growth hormone 1 isoform 4 
CSHL1                 0.149   chorionic somatomammotropin hormone-like 1 isoform 4...
CSH2                  0.138   chorionic somatomammotropin hormone 2 isoform 3 [Hom...
CSH1                  0.134   chorionic somatomammotropin hormone 1 isoform 3 [Hom...
CSHL1                 0.125   chorionic somatomammotropin hormone-like 1 isoform 3...
PRL                   0.045   prolactin precursor 
LOC100293689          0.045   PREDICTED: similar to chorionic somatomammotropin h...
UBAP2L                0.017   ubiquitin associated protein 2-like isoform a [Homo...
UBAP2L                0.017   ubiquitin associated protein 2-like isoform b [Homo...
MARK2                 0.013   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.013   MAP/microtubule affinity-regulating kinase 2 isoform...
RPA1                  0.011   replication protein A1, 70kDa 
LOC729792             0.011   PREDICTED: hypothetical protein 
LOC729792             0.011   PREDICTED: hypothetical protein 
LOC100294501          0.011   PREDICTED: hypothetical protein 
LOC100294249          0.011   PREDICTED: hypothetical protein XP_002344067 
LOC100294238          0.011   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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