Guide to the Human Genome
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Name: GH1 Sequence: fasta or formatted (122aa) NCBI GI: 13027818
Description:

growth hormone 1 isoform 4

Referenced in:

Growth Hormone and Related Hormones
Pituitary

Other entries for this name:
alt prot [217aa] growth hormone 1 isoform 1
alt prot [202aa] growth hormone 1 isoform 2
alt prot [177aa] growth hormone 1 isoform 3
alt prot [30aa] growth hormone 1 isoform 5
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7          7           1
 C cysteine            3.3          4           1
 D aspartate           6.6          8           2
 E glutamate           4.1          5           1
 F phenylalanine       8.2         10           1
 G glycine             6.6          8           1
 H histidine           2.5          3           1
 I isoleucine          2.5          3           1
 K lysine              4.1          5           1
 L leucine            14.8         18           3
 M methionine          2.5          3           1
 N asparagine          3.3          4           1
 P proline             3.3          4           1
 Q glutamine           4.9          6           1
 R arginine            7.4          9           1
 S serine              7.4          9           1
 T threonine           6.6          8           1
 V valine              2.5          3           1
 W tryptophan          0.8          1           1
 Y tyrosine            3.3          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   growth hormone 1 isoform 4 
CSH2                  0.864   chorionic somatomammotropin hormone 2 isoform 3 [Hom...
CSH1                  0.860   chorionic somatomammotropin hormone 1 isoform 3 [Hom...
GH1                   0.500   growth hormone 1 isoform 1 
GH1                   0.500   growth hormone 1 isoform 3 
GH1                   0.500   growth hormone 1 isoform 2 
GH2                   0.478   growth hormone 2 isoform 1 
GH2                   0.478   growth hormone 2 isoform 4 
LOC100293689          0.456   PREDICTED: similar to chorionic somatomammotropin h...
CSH1                  0.456   chorionic somatomammotropin hormone 1 isoform 1 [Homo...
CSH2                  0.456   chorionic somatomammotropin hormone 2 isoform 1 [Hom...
CSHL1                 0.430   chorionic somatomammotropin hormone-like 1 isoform 2...
CSHL1                 0.430   chorionic somatomammotropin hormone-like 1 isoform 4...
CSHL1                 0.430   chorionic somatomammotropin hormone-like 1 isoform 1...
CSHL1                 0.430   chorionic somatomammotropin hormone-like 1 isoform 3...
GH2                   0.360   growth hormone 2 isoform 3 
GH2                   0.360   growth hormone 2 isoform 2 
CSH2                  0.316   chorionic somatomammotropin hormone 2 isoform 2 [Hom...
CSH1                  0.316   chorionic somatomammotropin hormone 1 isoform 2 [Hom...
PRL                   0.039   prolactin precursor 
MDGA2                 0.013   MAM domain containing 1 isoform 1 
MDGA2                 0.013   MAM domain containing 1 isoform 2 
OR56A5                0.009   olfactory receptor, family 56, subfamily A, member ...
OR56A5                0.009   PREDICTED: olfactory receptor, family 56, subfamily...
OR56A5                0.009   PREDICTED: olfactory receptor, family 56, subfamily ...
OR56A5                0.009   PREDICTED: olfactory receptor, family 56, subfamily...
TTLL8                 0.009   tubulin tyrosine ligase-like family, member 8 [Homo...
CLSTN2                0.004   calsyntenin 2 
PDGFRB                0.004   platelet-derived growth factor receptor beta precurso...
MICAL2                0.004   microtubule associated monoxygenase, calponin and LIM...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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