Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: GH1 Sequence: fasta or formatted (177aa) NCBI GI: 13027816
Description:

growth hormone 1 isoform 3

Referenced in:

Growth Hormone and Related Hormones
Pituitary

Other entries for this name:
alt prot [217aa] growth hormone 1 isoform 1
alt prot [202aa] growth hormone 1 isoform 2
alt prot [122aa] growth hormone 1 isoform 4
alt prot [30aa] growth hormone 1 isoform 5
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1          9           1
 C cysteine            2.3          4           1
 D aspartate           6.2         11           2
 E glutamate           5.1          9           2
 F phenylalanine       6.8         12           1
 G glycine             6.2         11           1
 H histidine           1.7          3           1
 I isoleucine          3.4          6           1
 K lysine              3.4          6           1
 L leucine            17.5         31           3
 M methionine          2.3          4           1
 N asparagine          4.0          7           1
 P proline             2.8          5           1
 Q glutamine           5.1          9           1
 R arginine            6.2         11           1
 S serine              8.5         15           1
 T threonine           5.1          9           1
 V valine              4.0          7           1
 W tryptophan          1.1          2           1
 Y tyrosine            3.4          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   growth hormone 1 isoform 3 
GH1                   0.958   growth hormone 1 isoform 2 
GH1                   0.943   growth hormone 1 isoform 1 
GH2                   0.873   growth hormone 2 isoform 4 
GH2                   0.855   growth hormone 2 isoform 1 
CSH2                  0.798   chorionic somatomammotropin hormone 2 isoform 1 [Hom...
CSH1                  0.795   chorionic somatomammotropin hormone 1 isoform 1 [Homo...
CSHL1                 0.753   chorionic somatomammotropin hormone-like 1 isoform 2...
CSHL1                 0.726   chorionic somatomammotropin hormone-like 1 isoform 1...
CSHL1                 0.533   chorionic somatomammotropin hormone-like 1 isoform 4...
CSHL1                 0.533   chorionic somatomammotropin hormone-like 1 isoform 3...
GH2                   0.476   growth hormone 2 isoform 2 
GH2                   0.473   growth hormone 2 isoform 3 
LOC100293689          0.452   PREDICTED: similar to chorionic somatomammotropin h...
CSH2                  0.431   chorionic somatomammotropin hormone 2 isoform 3 [Hom...
CSH1                  0.428   chorionic somatomammotropin hormone 1 isoform 3 [Hom...
CSH2                  0.419   chorionic somatomammotropin hormone 2 isoform 2 [Hom...
CSH1                  0.419   chorionic somatomammotropin hormone 1 isoform 2 [Hom...
GH1                   0.343   growth hormone 1 isoform 4 
PRL                   0.063   prolactin precursor 
RYR3                  0.024   ryanodine receptor 3 
RYR2                  0.024   cardiac muscle ryanodine receptor 
RYR1                  0.024   skeletal muscle ryanodine receptor isoform 2 
RYR1                  0.024   skeletal muscle ryanodine receptor isoform 1 
ABCB11                0.012   ATP-binding cassette, sub-family B (MDR/TAP), member...
PRPF8                 0.009   U5 snRNP-specific protein 
RG9MTD2               0.009   RNA (guanine-9-) methyltransferase domain containin...
RG9MTD2               0.009   RNA (guanine-9-) methyltransferase domain containin...
RG9MTD2               0.009   RNA (guanine-9-) methyltransferase domain containing...
C12orf26              0.006   hypothetical protein LOC84190 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press