Guide to the Human Genome
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Name: GH1 Sequence: fasta or formatted (217aa) NCBI GI: 13027812
Description:

growth hormone 1 isoform 1

Referenced in:

Growth Hormone and Related Hormones
Pituitary

Other entries for this name:
alt prot [202aa] growth hormone 1 isoform 2
alt prot [177aa] growth hormone 1 isoform 3
alt prot [122aa] growth hormone 1 isoform 4
alt prot [30aa] growth hormone 1 isoform 5
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6         10           1
 C cysteine            2.3          5           1
 D aspartate           5.1         11           2
 E glutamate           6.9         15           2
 F phenylalanine       6.5         14           1
 G glycine             5.1         11           1
 H histidine           1.4          3           1
 I isoleucine          3.7          8           1
 K lysine              4.1          9           1
 L leucine            15.2         33           3
 M methionine          1.8          4           1
 N asparagine          4.1          9           1
 P proline             4.1          9           1
 Q glutamine           6.5         14           2
 R arginine            5.5         12           1
 S serine              9.7         21           1
 T threonine           5.5         12           1
 V valine              3.2          7           1
 W tryptophan          0.9          2           1
 Y tyrosine            3.7          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   growth hormone 1 isoform 1 
GH2                   0.910   growth hormone 2 isoform 1 
GH1                   0.903   growth hormone 1 isoform 2 
CSH2                  0.847   chorionic somatomammotropin hormone 2 isoform 1 [Hom...
CSH1                  0.847   chorionic somatomammotropin hormone 1 isoform 1 [Homo...
GH2                   0.823   growth hormone 2 isoform 4 
CSHL1                 0.768   chorionic somatomammotropin hormone-like 1 isoform 1...
GH1                   0.758   growth hormone 1 isoform 3 
CSHL1                 0.666   chorionic somatomammotropin hormone-like 1 isoform 2...
GH2                   0.605   growth hormone 2 isoform 2 
GH2                   0.603   growth hormone 2 isoform 3 
CSH2                  0.545   chorionic somatomammotropin hormone 2 isoform 2 [Hom...
CSH1                  0.542   chorionic somatomammotropin hormone 1 isoform 2 [Hom...
CSHL1                 0.482   chorionic somatomammotropin hormone-like 1 isoform 4...
CSHL1                 0.453   chorionic somatomammotropin hormone-like 1 isoform 3...
LOC100293689          0.363   PREDICTED: similar to chorionic somatomammotropin h...
GH1                   0.276   growth hormone 1 isoform 4 
CSH1                  0.252   chorionic somatomammotropin hormone 1 isoform 3 [Hom...
CSH2                  0.252   chorionic somatomammotropin hormone 2 isoform 3 [Hom...
PRL                   0.121   prolactin precursor 
RYR3                  0.019   ryanodine receptor 3 
RYR2                  0.019   cardiac muscle ryanodine receptor 
RYR1                  0.019   skeletal muscle ryanodine receptor isoform 2 
RYR1                  0.019   skeletal muscle ryanodine receptor isoform 1 
ABCB11                0.007   ATP-binding cassette, sub-family B (MDR/TAP), member...
PRPF8                 0.007   U5 snRNP-specific protein 
PDGFRB                0.007   platelet-derived growth factor receptor beta precurso...
SCAF1                 0.007   SR-related CTD-associated factor 1 
TNC                   0.007   tenascin C precursor 
RG9MTD2               0.007   RNA (guanine-9-) methyltransferase domain containin...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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