Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 38348368

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|38348368 hypothetical protein LOC374872 [Homo sapiens]
         (473 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|38348368 hypothetical protein LOC374872 [Homo sapiens]             972   0.0  
gi|157909822 pragmin [Homo sapiens]                                   100   3e-21
gi|148368962 NKF3 kinase family member [Homo sapiens]                  97   4e-20
gi|206597445 alpha 1 type XVIII collagen isoform 3 precursor [Ho...    42   0.002
gi|239744254 PREDICTED: hypothetical protein [Homo sapiens]            40   0.004
gi|157676320 SH3-binding domain kinase family, member 2 [Homo sa...    40   0.006
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    39   0.010
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi...    38   0.017
gi|239742763 PREDICTED: hypothetical protein [Homo sapiens]            38   0.017
gi|239740974 PREDICTED: hypothetical protein [Homo sapiens]            38   0.017
gi|239508696 PREDICTED: hypothetical protein [Homo sapiens]            38   0.023
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    37   0.051
gi|110611235 alpha 1 type XVIII collagen isoform 1 precursor [Ho...    37   0.051
gi|54860079 nadrin isoform 1 [Homo sapiens]                            37   0.051
gi|54860105 nadrin isoform 2 [Homo sapiens]                            37   0.051
gi|14196445 calcium/calmodulin-dependent protein kinase IG [Homo...    37   0.051
gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Ho...    36   0.066
gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Ho...    36   0.066
gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Ho...    36   0.066
gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Hom...    36   0.066
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]                     36   0.066
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]                     36   0.066
gi|239753435 PREDICTED: hypothetical protein XP_002345651 [Homo ...    36   0.066
gi|239747993 PREDICTED: hypothetical protein XP_002346504 [Homo ...    36   0.066
gi|239741891 PREDICTED: hypothetical protein XP_002342316 [Homo ...    36   0.066
gi|14790190 spen homolog, transcriptional regulator [Homo sapiens]     36   0.066
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ...    36   0.066
gi|163965366 nascent polypeptide-associated complex alpha subuni...    36   0.066
gi|27597078 TYRO3 protein tyrosine kinase [Homo sapiens]               35   0.11 
gi|226437579 NAC alpha domain containing [Homo sapiens]                35   0.15 

>gi|38348368 hypothetical protein LOC374872 [Homo sapiens]
          Length = 473

 Score =  973 bits (2514), Expect = 0.0
 Identities = 473/473 (100%), Positives = 473/473 (100%)

Query: 1   MSSPEPPTEPPEPDNPTWSTQPTYSNLGQIRAHLLPSKACRLRTPGSLSTNPEPLPPPLP 60
           MSSPEPPTEPPEPDNPTWSTQPTYSNLGQIRAHLLPSKACRLRTPGSLSTNPEPLPPPLP
Sbjct: 1   MSSPEPPTEPPEPDNPTWSTQPTYSNLGQIRAHLLPSKACRLRTPGSLSTNPEPLPPPLP 60

Query: 61  KKILTRTQSLPTRRTLHPSSIQVQPPRRPFLGSHSVDKSQAAVGPACLPAELTFGPADAP 120
           KKILTRTQSLPTRRTLHPSSIQVQPPRRPFLGSHSVDKSQAAVGPACLPAELTFGPADAP
Sbjct: 61  KKILTRTQSLPTRRTLHPSSIQVQPPRRPFLGSHSVDKSQAAVGPACLPAELTFGPADAP 120

Query: 121 LGLSLRDLHSPEAVHTALAARQLQGLRTIYARLRARLMGGHPGPCHPGHSFRLLDSSPCA 180
           LGLSLRDLHSPEAVHTALAARQLQGLRTIYARLRARLMGGHPGPCHPGHSFRLLDSSPCA
Sbjct: 121 LGLSLRDLHSPEAVHTALAARQLQGLRTIYARLRARLMGGHPGPCHPGHSFRLLDSSPCA 180

Query: 181 ESGDALYYRVVRAHEDAWHILVAKVPKPGADVPHPWGLELQASLSPHFNLQGLCGLVPEG 240
           ESGDALYYRVVRAHEDAWHILVAKVPKPGADVPHPWGLELQASLSPHFNLQGLCGLVPEG
Sbjct: 181 ESGDALYYRVVRAHEDAWHILVAKVPKPGADVPHPWGLELQASLSPHFNLQGLCGLVPEG 240

Query: 241 TLPGAPWRGAVALAAEVPERTVAQWLAEACTQPPEEFVWAVALLLLQLSAALKFLEAWGA 300
           TLPGAPWRGAVALAAEVPERTVAQWLAEACTQPPEEFVWAVALLLLQLSAALKFLEAWGA
Sbjct: 241 TLPGAPWRGAVALAAEVPERTVAQWLAEACTQPPEEFVWAVALLLLQLSAALKFLEAWGA 300

Query: 301 ALVELRPENLLLVAPRGCATTGPPRLLLTDFGRVCLQPPGPPGSPGPHAPQLGSLLRALL 360
           ALVELRPENLLLVAPRGCATTGPPRLLLTDFGRVCLQPPGPPGSPGPHAPQLGSLLRALL
Sbjct: 301 ALVELRPENLLLVAPRGCATTGPPRLLLTDFGRVCLQPPGPPGSPGPHAPQLGSLLRALL 360

Query: 361 SLAAPSTTPLAAGLELLAAQLTRLRPSASRTRGALQALLWGPGPELRGRGAPLGPWLRAL 420
           SLAAPSTTPLAAGLELLAAQLTRLRPSASRTRGALQALLWGPGPELRGRGAPLGPWLRAL
Sbjct: 361 SLAAPSTTPLAAGLELLAAQLTRLRPSASRTRGALQALLWGPGPELRGRGAPLGPWLRAL 420

Query: 421 GPWLRVRRGLLVLRLAERAAGGEAPSLEDWLCCEYLAEATESSMGQALALLWD 473
           GPWLRVRRGLLVLRLAERAAGGEAPSLEDWLCCEYLAEATESSMGQALALLWD
Sbjct: 421 GPWLRVRRGLLVLRLAERAAGGEAPSLEDWLCCEYLAEATESSMGQALALLWD 473


>gi|157909822 pragmin [Homo sapiens]
          Length = 1402

 Score =  100 bits (249), Expect = 3e-21
 Identities = 126/499 (25%), Positives = 185/499 (37%), Gaps = 130/499 (26%)

Query: 92   GSHSVDKSQAAVGPACLPAELTFGPADAPLGLSLRDLHSPEAVHTALAARQLQGLRTIYA 151
            G+ S   SQ +V      ++ + G     L   L ++ S E  +  L     Q L  + A
Sbjct: 912  GAPSASSSQLSVS-----SQASTGSTQLQLHGLLSNISSKEGTYAKLGGLYTQSLARLVA 966

Query: 152  RLRARLMGGHPGPCHPGHS----FRLLDSSPCAESGDALYYRVVRAHE--DAWHILVAKV 205
            +     MGG     H   +    F+L  + PC +SGDA+YY    + +    + + + K 
Sbjct: 967  KCEDLFMGGQKKELHFNENNWSLFKLTCNKPCCDSGDAIYYCATCSEDPGSTYAVKICKA 1026

Query: 206  PKPGADVPHPWGLELQASLSPHFNLQGLCGL--------------VPEGTLPGAPWRG-- 249
            P+P   V +        S+  HFN+Q  CG                P+  +P  P     
Sbjct: 1027 PEP-KTVSY-----CSPSVPVHFNIQQDCGHFVASVPSSMLSSPDAPKDPVPALPTHPPA 1080

Query: 250  -----AVALAAEVPERTVAQWLAEACTQ---PPEEFVWAVALLLLQLSAALKFLEAWGAA 301
                  V +  EVP +T + ++ ++       PE +   V  LLLQL   L+ L+  G  
Sbjct: 1081 QEQDCVVVITREVPHQTASDFVRDSAASHQAEPEAYERRVCFLLLQLCNGLEHLKEHGII 1140

Query: 302  LVELRPENLLLV--------------APRGCATTGP------------------------ 323
              +L  ENLLLV              AP   A   P                        
Sbjct: 1141 HRDLCLENLLLVHCTLQAGPGPAPAPAPAPAAAAPPCSSAAPPAGGTLSPAAGPASPEGP 1200

Query: 324  -----PRLLLTDFGRVCLQPPGPPG-----SPGPHAP--------------QLGSLLRAL 359
                 PRL++++F +   +P G P      S    AP              Q G L+  L
Sbjct: 1201 REKQLPRLIISNFLKAKQKPGGTPNLQQKKSQARLAPEIVSASQYRKFDEFQTGILIYEL 1260

Query: 360  LSLAAP---------------STTPLAA------GLELLAAQLTRLRP----SASRTRGA 394
            L    P                  PL A      GL+ LA  L    P         +  
Sbjct: 1261 LHQPNPFEVRAQLRERDYRQEDLPPLPALSLYSPGLQQLAHLLLEADPIKRIRIGEAKRV 1320

Query: 395  LQALLWGPGPEL-RGRGAPLGPWLRALGPWLRVRRGLLVLRLAERAAG-GEAPSLEDWLC 452
            LQ LLWGP  EL +  G         L  W+ ++R L++++ AE+A        LEDWLC
Sbjct: 1321 LQCLLWGPRRELVQQPGTSEEALCGTLHNWIDMKRALMMMKFAEKAVDRRRGVELEDWLC 1380

Query: 453  CEYLAEATESSMGQALALL 471
            C+YLA A   ++ Q+L LL
Sbjct: 1381 CQYLASAEPGALLQSLKLL 1399


>gi|148368962 NKF3 kinase family member [Homo sapiens]
          Length = 1746

 Score = 96.7 bits (239), Expect = 4e-20
 Identities = 126/500 (25%), Positives = 192/500 (38%), Gaps = 125/500 (25%)

Query: 93   SHSVDKSQAAVGPACLPAELTFGPADAPLGLSLRDLHSPEAVHTALAARQLQGLRTIYAR 152
            S+S++   +  GP+C        P    L    R L + E V   + +     L+ +  +
Sbjct: 1248 SNSMESLSSRRGPSCRQGRGIQKPQRQAL---YRGLENREEVVGKIRSLHTDALKKLAVK 1304

Query: 153  LRARLMGGHPGPCHPG----HSFRLLDSSPCAESGDALYYRVVRAHEDAWHILVAKVPKP 208
                 M G       G      FRL    PC E+GDA+YY    A +D  +    K+ K 
Sbjct: 1305 CEDLFMAGQKDQLRFGVDSWSDFRLTSDKPCCEAGDAVYYTASYA-KDPLNNYAVKICKS 1363

Query: 209  GADVPHPW--GLELQASLSPHFNLQGLCG---------LVP------------------- 238
             A     +   L ++ SL+ HFN+Q  CG         L+P                   
Sbjct: 1364 KAKESQQYYHSLAVRQSLAVHFNIQQDCGHFLAEVPNRLLPWEDPDDPEKDEDDMEETEE 1423

Query: 239  ------------------------EGTLPGAPWRGAVALAAEVPERTVAQWLAEACTQ-- 272
                                    +G +        V +  EVP  TVA ++ ++  Q  
Sbjct: 1424 DAKGETDGKNPKPCSEAASSQKENQGVMSKKQRSHVVVITREVPCLTVADFVRDSLAQHG 1483

Query: 273  -PPEEFVWAVALLLLQLSAALKFLEAWGAALVELRPENLLLV--APRGCA---------- 319
              P+ +   V LLLLQL + L+ L+ +     +LR ENLLLV   P G A          
Sbjct: 1484 KSPDLYERQVCLLLLQLCSGLEHLKPYHVTHCDLRLENLLLVHYQPGGTAQGFGPAEPSP 1543

Query: 320  -TTGPPRLLLTDFGRVC----LQPPGPPGSPGPHAPQL--------------GSLLRALL 360
             ++ P RL++++F +      L  P         AP++              G L+  +L
Sbjct: 1544 TSSYPTRLIVSNFSQAKQKSHLVDPEILRDQSRLAPEIITATQYKKCDEFQTGILIYEML 1603

Query: 361  SLA---------------------APSTTPLAAGLELLAAQLTRLRPSA----SRTRGAL 395
             L                       P  +P + GL+ LA+ L    PS     S  +G L
Sbjct: 1604 HLPNPFDENPELKEREYTRADLPRIPFRSPYSRGLQQLASCLLNPNPSERILISDAKGIL 1663

Query: 396  QALLWGPGPELRGRGAPLGPWLRA---LGPWLRVRRGLLVLRLAERAAGGEAP-SLEDWL 451
            Q LLWGP  +L          ++    L  WL ++R LL+++ AE++   E   SLEDWL
Sbjct: 1664 QCLLWGPREDLFQTFTACPSLVQRNTLLQNWLDIKRTLLMIKFAEKSLDREGGISLEDWL 1723

Query: 452  CCEYLAEATESSMGQALALL 471
            C +YLA AT  S+   + +L
Sbjct: 1724 CAQYLAFATTDSLSCIVKIL 1743



 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 17/88 (19%)

Query: 5    EPPTEPPEPDNPTWSTQPTYSNLGQIRAHLLPSKACRL-------------RTPGSLSTN 51
            E  ++P +P NP      TYSNLGQ RA ++P K  R              +T       
Sbjct: 1092 EDISDPMDP-NPC---SATYSNLGQSRAAMIPPKQPRQPKGAVDDAIAFGGKTDQEAPNA 1147

Query: 52   PEPLPPPLPKKILTRTQSLPTRRTLHPS 79
             +P PPPLPKK++ R  + P  + L  S
Sbjct: 1148 SQPTPPPLPKKMIIRANTEPISKDLQKS 1175



 Score = 32.3 bits (72), Expect = 0.96
 Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 3/80 (3%)

Query: 1   MSSPEPPTEPPEPDNPTWSTQPTYSNLGQIRAHLLPSKACRLRTPGSLSTNPEPLPPPLP 60
           ++SP+  +    P++P  S+  T    GQI AH   S A R +   + ST+P    P + 
Sbjct: 493 VNSPKTKSSSSTPNSPVTSSSLTP---GQISAHFQKSSAIRYQEVWTSSTSPRQKIPKVE 549

Query: 61  KKILTRTQSLPTRRTLHPSS 80
                   ++P R+  H S+
Sbjct: 550 LITSGTGPNVPPRKNCHKSA 569


>gi|206597445 alpha 1 type XVIII collagen isoform 3 precursor [Homo
           sapiens]
          Length = 1751

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 51/199 (25%), Positives = 75/199 (37%), Gaps = 20/199 (10%)

Query: 212 VPHPWG-LELQASLSPHFNLQGLCGLVPEGTLPGAPWRGAVALAAEVPERTVAQWLAEAC 270
           +P P G L +Q +     ++    G     T PG+P   +  L       T A+      
Sbjct: 45  IPEPQGPLPVQPTADTTTHVTPRNGSTEPATAPGSPEPPSELLEDGQDTPTSAE-----S 99

Query: 271 TQPPEEFVWAVALLLLQLSAALK-FLEAWGAALVE---LRPENLLLVAPRGCATTGPPRL 326
              PEE +  V   +L ++  ++ F++ W   +      R E L+L  P G      P  
Sbjct: 100 PDAPEENIAGVGAEILNVAKGIRSFVQLWNDTVPTESLARAETLVLETPVGPLALAGPSS 159

Query: 327 LLTDFGRVCLQPPGPPGSPGPHAPQLGSLLRALLSLAAPSTTPLAAGLELLAAQLTRLR- 385
              + G       G P SPG H  + G+L         P+ TP    L    A LT    
Sbjct: 160 TPQENGTTLWPSRGIPSSPGAHTTEAGTL---------PAPTPSPPSLGRPWAPLTGPSV 210

Query: 386 PSASRTRGALQALLWGPGP 404
           P  S  R +L +LL G  P
Sbjct: 211 PPPSSGRASLSSLLGGAPP 229



 Score = 30.0 bits (66), Expect = 4.8
 Identities = 11/15 (73%), Positives = 11/15 (73%)

Query: 338  PPGPPGSPGPHAPQL 352
            PPGPPG PGP  P L
Sbjct: 1008 PPGPPGPPGPPGPGL 1022



 Score = 29.3 bits (64), Expect = 8.1
 Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 2/32 (6%)

Query: 338  PPGPPGSPGPHAPQLGSLLRALLSLAAPSTTP 369
            PPGPPG PGP  P      R  +S+  P   P
Sbjct: 1398 PPGPPGPPGP--PSFPGPHRQTISVPGPPGPP 1427


>gi|239744254 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 385

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 35/89 (39%), Positives = 43/89 (48%), Gaps = 7/89 (7%)

Query: 36  PSKACRLRTPGSLSTNPEPLPPPLPKKILT--RTQSL-PTRRTLHPSSIQVQPPRRPFLG 92
           P++ CR RT  S +     LPP       T  RT S  P   +  P   Q+ PPRRP LG
Sbjct: 292 PNRLCRPRTFSSQALRAHLLPPGGLYSSSTGWRTASAGPALASQGPLQAQLLPPRRP-LG 350

Query: 93  SHSVDKSQAAVGPACLPAELTFGPADAPL 121
           + S+  SQ    PAC PA  +  P DA L
Sbjct: 351 AKSLPASQQ---PACGPAPPSRWPVDAQL 376


>gi|157676320 SH3-binding domain kinase family, member 2 [Homo
           sapiens]
          Length = 348

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 38/116 (32%), Positives = 49/116 (42%), Gaps = 30/116 (25%)

Query: 280 AVALLLLQLSAALKFLEAWGAALVELRPENLLLVAPRGCATTGPPRLLLTDFG------- 332
           AV     QL++AL+++ A G    +L+PEN+L+  P  C      R  LTDFG       
Sbjct: 159 AVHRCAAQLASALEYIHARGLVYRDLKPENVLVCDP-ACR-----RFKLTDFGHTRPRGT 212

Query: 333 --------------RVCLQPPGPPG---SPGPHAPQLGSLLRALLSLAAPSTTPLA 371
                          +C  PP P G    P   A  LG LL  LL+   P   PLA
Sbjct: 213 LLRLAGPPIPYTAPELCAPPPLPEGLPIQPALDAWALGVLLFCLLTGYFPWDRPLA 268


>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 1124

 Score = 38.9 bits (89), Expect = 0.010
 Identities = 121/473 (25%), Positives = 147/473 (31%), Gaps = 72/473 (15%)

Query: 6   PPTE------PPEPDNPTWS-TQPTYSNLGQIRAHLLPSKACRLRTPGSLSTNPEPLPPP 58
           PP E      PP    P  S T P   NL  +    L + +  L TP  L T P P P P
Sbjct: 510 PPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTP-HLETPPCPAPCP 568

Query: 59  LPKKILTRTQSLPTRRTLHPSSIQVQPPRR-------PFLGSHSVDKSQAAVGPACLPAE 111
           L       T   P      PSSI   PP+        P  G  S   S  A  P   P  
Sbjct: 569 LQAPPSPLTTPPPET----PSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPX 624

Query: 112 LTFGPADAPLG------LSLRDLHSPEAVHTALAARQLQGLRTIYARLRARLMGGHPGPC 165
           L   P  AP        LS     SP+A + ALA   LQ            +      P 
Sbjct: 625 LALPPLQAPPSPPASPPLSPLATPSPQAPN-ALAVHLLQA--PFSPPPSPPVQAPFSPPA 681

Query: 166 HPGHSFRLLDSSPCAESGDALYYRVVRAHEDAWHILVAKVPKPGADVPHPWGLELQASLS 225
            P  S      S    S  A   +V  +   +  +  +  P P A  P      LQ   S
Sbjct: 682 SPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLA-APPLQVPPS 740

Query: 226 PHFNLQGLCGLVPEGTLPGAPWRGAVALAAEVPERTVAQWLAEACTQPPEEFVWAVALLL 285
           P  +      + P  T P        A   +VP    A        +PP +   A+A   
Sbjct: 741 PPASPP----MSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPP 796

Query: 286 LQLSAALKFLEAWGAALVELRPENLLLVAPRGCATTGPPRLLLTDFGRV--------CLQ 337
           LQ   AL    A         P   L ++P        P +L     +V         LQ
Sbjct: 797 LQ---ALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQ 853

Query: 338 PPGPPGSPGPHAPQLGSLLRALLSLAAPSTTPLAAGLELLAAQLTRLRPSASRT----RG 393
            P  P +PGP     G  L   L+   P     +    L    L     SA+ T    RG
Sbjct: 854 APRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRG 913

Query: 394 --------------------ALQALLW--GPGPELRGRGAPLG--PWLRALGP 422
                               A     W  GP P L  RGAP    PW  A GP
Sbjct: 914 YDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGP 966



 Score = 32.0 bits (71), Expect = 1.3
 Identities = 101/407 (24%), Positives = 132/407 (32%), Gaps = 76/407 (18%)

Query: 1   MSSP--EPPTEPPEPDNPTWSTQPTYSNLGQIRAH------------LLPSKACRLRTPG 46
           +SSP    P+    P  P   +QP    L  +R              L P  +  L TP 
Sbjct: 249 LSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPS 308

Query: 47  SLSTNPEPLPPPLPKKILTRTQSLPTRRTLHPS-----SIQVQPPRRPFLGSHSVDKSQA 101
              T   P+PPP          + P   TL PS      + + PP      S     S  
Sbjct: 309 PSGTKARPVPPP-------DNAATPLPATLPPSPPLATPLPLAPPSPSAPPSLQTLPSPP 361

Query: 102 AVGPACLPAELTFGPADAPLGLSLRDLHSPEAVHTALAARQLQGLRTIYA--RLRARLMG 159
           A  P+  P  +T  P  AP  L       P  V  +L +  LQ   +  A   L+A    
Sbjct: 362 ATPPSQAPPSMTTPPMQAPPSL---QTIPPIQVPHSLTSPSLQAPPSPLALSSLQATTSL 418

Query: 160 GHPGPCHPGHSFRLLDSSPCAESGDALYYRVVRAHEDAWHILVAKVPKPGADVPHPWGLE 219
           G P      HSF L  S    ++      R      D+        P   A +  P    
Sbjct: 419 GSP-TLQATHSF-LTMSPRQTQASLTSPSRPASTPPDS--------PPLQAPLSLPASPP 468

Query: 220 LQASLSPHFN----------LQGLCGLVPEGTLPGAPWRGAVALAAEVPERTV---AQWL 266
           LQ SLSP  +          LQ L  L      P AP    +    E          Q  
Sbjct: 469 LQTSLSPAVSPLSSPLTIHPLQALSSLASHS--PQAPLSSLIMPPLETQSSLAPPSLQTP 526

Query: 267 AEACTQPPEEFVWAVALLLLQLSAALKFLEAWGAALVELRPENLLLVAPRGCATTGPPRL 326
             + T PP E + ++A   LQ ++A           +E  P       P  C    PP  
Sbjct: 527 PASLTTPPLENLPSLAPPPLQTASA-----PLTTPHLETPP------CPAPCPLQAPPSP 575

Query: 327 LLTDFGRVCLQPPGPPGSPGPHAPQLGSLLRA--LLSLAAPSTTPLA 371
           L T        PP  P S     PQ    L +  L  L +P  +PLA
Sbjct: 576 LTT-------PPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLA 615



 Score = 31.2 bits (69), Expect = 2.1
 Identities = 24/61 (39%), Positives = 28/61 (45%), Gaps = 3/61 (4%)

Query: 336 LQPPGPPGSPGPHAPQLGSLLRALLSLAAPSTTPLA--AGLELLAAQLTRLRPSASRTRG 393
           L  P PPGSP P  P   + LR L +  A    PLA  AG  +  A +    P A  TR 
Sbjct: 24  LLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAG-GIGGATIPESAPRAGPTRS 82

Query: 394 A 394
           A
Sbjct: 83  A 83


>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
           sapiens]
          Length = 816

 Score = 38.1 bits (87), Expect = 0.017
 Identities = 115/489 (23%), Positives = 155/489 (31%), Gaps = 89/489 (18%)

Query: 4   PEPPTEPPEPDNPTWSTQPTYSNLGQIRAHLLPSKACRLRTPGSLSTNPEPLPPPLPKKI 63
           P PPTE P     + S   T       R    PS    L+ P S S +    P   P + 
Sbjct: 189 PRPPTEGPRKSVSSASEHSTTEPSPAARRR--PSAGGGLQRPASRSLSSSATPLSSPARS 246

Query: 64  LTRTQSLPTRRTLHPSSI-----------QVQPPRR---PFLGSHSVDKSQAAVGPACLP 109
               +  P R   HPS             QV PPR+   P LG  S     A   P+  P
Sbjct: 247 GPSARGTP-RAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLS-SSPLATPSPSAPP 304

Query: 110 AELTFGPADAPLGLSLRDLHSPEAVH-----TALAARQLQGLRTIYARLRARLMGGHPGP 164
           +     P+  P   SL+ L SP A       T+L +  LQ   +         +   P  
Sbjct: 305 S-----PSAPP---SLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQ 356

Query: 165 CHPGHSFRLLDSSPCAESGDALYYRVVRAHEDAWHILVAKVPKPGADVPHPWGLELQASL 224
             P  +   L + P   +   L      + +    + V  +  P +  P P    +QA  
Sbjct: 357 APPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSP---PVQAPF 413

Query: 225 SPHFNLQGLCGLVPEGTLPGAPWRGAVALAAEVPERTVAQWLAEACTQPPEEFVWAVALL 284
           SP  +      + P  T P        A   +VP    A         PP +    +A  
Sbjct: 414 SPPASPP----VSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAP 469

Query: 285 LLQLSAA------------LKFLEAWGAALVELRPENLLLVAPRGCATTGPPR---LLLT 329
            LQL+              L+ L +  A+     P +     P     T PP+   +L  
Sbjct: 470 PLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAA 529

Query: 330 DFGRV--------CLQPPGPPGSPGPHAPQLGSLLRALLSLAAPSTTPLAAGLELLAAQL 381
              +V         LQ P  P +PGP     G  L   L+   P     +    L    L
Sbjct: 530 PLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDL 589

Query: 382 TRLRPSASRT----RG--------------------ALQALLW--GPGPELRGRGAPLG- 414
                SA+ T    RG                    A     W  GP P L  RGAP   
Sbjct: 590 AGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAP 649

Query: 415 -PWLRALGP 422
            PW  A GP
Sbjct: 650 LPWPPATGP 658



 Score = 29.6 bits (65), Expect = 6.2
 Identities = 16/36 (44%), Positives = 18/36 (50%)

Query: 336 LQPPGPPGSPGPHAPQLGSLLRALLSLAAPSTTPLA 371
           L  P PPGSP P  P   + LR L +  A    PLA
Sbjct: 24  LLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLA 59


>gi|239742763 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 385

 Score = 38.1 bits (87), Expect = 0.017
 Identities = 34/89 (38%), Positives = 43/89 (48%), Gaps = 7/89 (7%)

Query: 36  PSKACRLRTPGSLSTNPEPLPPPLPKKILT--RTQSL-PTRRTLHPSSIQVQPPRRPFLG 92
           P++ CR RT  S +     LPP       T  RT S  P+  +  P   Q+ PPRRP  G
Sbjct: 292 PNRLCRPRTFSSQALRAHLLPPGGLYSSSTGWRTASAGPSLASQGPLQAQLLPPRRP-PG 350

Query: 93  SHSVDKSQAAVGPACLPAELTFGPADAPL 121
           + S+  SQ    PAC PA  +  P DA L
Sbjct: 351 AKSLPASQQ---PACGPAPPSRWPVDAQL 376


>gi|239740974 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 385

 Score = 38.1 bits (87), Expect = 0.017
 Identities = 34/89 (38%), Positives = 43/89 (48%), Gaps = 7/89 (7%)

Query: 36  PSKACRLRTPGSLSTNPEPLPPPLPKKILT--RTQSL-PTRRTLHPSSIQVQPPRRPFLG 92
           P++ CR RT  S +     LPP       T  RT S  P+  +  P   Q+ PPRRP  G
Sbjct: 292 PNRLCRPRTFSSQALRAHLLPPGGLYSSSTGWRTASAGPSLASQGPLQAQLLPPRRP-PG 350

Query: 93  SHSVDKSQAAVGPACLPAELTFGPADAPL 121
           + S+  SQ    PAC PA  +  P DA L
Sbjct: 351 AKSLPASQQ---PACGPAPPSRWPVDAQL 376


>gi|239508696 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 385

 Score = 37.7 bits (86), Expect = 0.023
 Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 7/89 (7%)

Query: 36  PSKACRLRTPGSLSTNPEPLPPPLPKKILT--RTQSL-PTRRTLHPSSIQVQPPRRPFLG 92
           P++ CR RT  S +     LPP       T  RT S  P   +  P   Q+ PPRRP  G
Sbjct: 292 PNRLCRPRTFSSQALRAHLLPPGGLYSSSTGWRTASAGPALASQGPLQAQLLPPRRP-PG 350

Query: 93  SHSVDKSQAAVGPACLPAELTFGPADAPL 121
           + S+  SQ    PAC PA  +  P DA L
Sbjct: 351 AKSLPASQQ---PACGPAPPSRWPVDAQL 376


>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 855

 Score = 36.6 bits (83), Expect = 0.051
 Identities = 115/510 (22%), Positives = 153/510 (30%), Gaps = 101/510 (19%)

Query: 4   PEPPTEPPEPDNPTWSTQPTYSNLGQIRAHLLPSKACRLRTPGSLSTNPEPLPPPLPKKI 63
           P PPTE P     + S   T       R    PS    L+ P S S +    P   P + 
Sbjct: 198 PRPPTEGPRKSVSSASEHSTTEPSPAARRR--PSAGGGLQRPASRSLSSSATPLSSPARS 255

Query: 64  LTRTQSLPTRRTLHPSSI-----------QVQPPRR---PFLG--------SHSVDKSQA 101
               +  P R   HPS             QV PPR+   P LG        + S   +  
Sbjct: 256 GPSARGTP-RAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQ 314

Query: 102 AVGPACLPAE-------------LTFGPADAPLGLSLRDLHSPEAVH-----TALAARQL 143
           +  P  LPA              L   P       SL+ L SP A       T+L +  L
Sbjct: 315 SQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTL 374

Query: 144 QGLRTIYARLRARLMGGHPGPCHPGHSFRLLDSSPCAESGDALYYRVVRAHEDAWHILVA 203
           Q   +         +   P    P  +   L + P   +   L      + +    + V 
Sbjct: 375 QATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVH 434

Query: 204 KVPKPGADVPHPWGLELQASLSPHFNLQGLCGLVPEGTLPGAPWRGAVALAAEVPERTVA 263
            +  P +  P P    +QA  SP  +      + P  T P        A   +VP    A
Sbjct: 435 LLQAPFSPPPSP---PVQAPFSPPASPP----VSPSATPPSQAPPSLAAPPLQVPPSPPA 487

Query: 264 QWLAEACTQPPEEFVWAVALLLLQLSAA------------LKFLEAWGAALVELRPENLL 311
                    PP +    +A   LQL+              L+ L +  A+     P +  
Sbjct: 488 SPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPS 547

Query: 312 LVAPRGCATTGPPRLLLTDFGRVCLQPPGPPGS-----------PGPHAPQLGSLLRALL 360
              P     T PP+        +   PP PP S           PGP     G  L   L
Sbjct: 548 ASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLAL 607

Query: 361 SLAAPSTTPLAAGLELLAAQLTRLRPSASRT----RG--------------------ALQ 396
           +   P     +    L    L     SA+ T    RG                    A  
Sbjct: 608 APGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACH 667

Query: 397 ALLW--GPGPELRGRGAPLG--PWLRALGP 422
              W  GP P L  RGAP    PW  A GP
Sbjct: 668 PAAWSRGPAPPLAFRGAPGAPLPWPPATGP 697



 Score = 31.2 bits (69), Expect = 2.1
 Identities = 24/61 (39%), Positives = 28/61 (45%), Gaps = 3/61 (4%)

Query: 336 LQPPGPPGSPGPHAPQLGSLLRALLSLAAPSTTPLA--AGLELLAAQLTRLRPSASRTRG 393
           L  P PPGSP P  P   + LR L +  A    PLA  AG  +  A +    P A  TR 
Sbjct: 24  LLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAG-GIGGATIPESAPRAGPTRS 82

Query: 394 A 394
           A
Sbjct: 83  A 83


>gi|110611235 alpha 1 type XVIII collagen isoform 1 precursor [Homo
           sapiens]
          Length = 1516

 Score = 36.6 bits (83), Expect = 0.051
 Identities = 40/167 (23%), Positives = 64/167 (38%), Gaps = 17/167 (10%)

Query: 212 VPHPWG-LELQASLSPHFNLQGLCGLVPEGTLPGAPWRGAVALAAEVPERTVAQWLAEAC 270
           +P P G L +Q +     ++    G     T PG+P   +  L       T A+      
Sbjct: 45  IPEPQGPLPVQPTADTTTHVTPRNGSTEPATAPGSPEPPSELLEDGQDTPTSAE-----S 99

Query: 271 TQPPEEFVWAVALLLLQLSAALK-FLEAWGAALVE---LRPENLLLVAPRGCATTGPPRL 326
              PEE +  V   +L ++  ++ F++ W   +      R E L+L  P G      P  
Sbjct: 100 PDAPEENIAGVGAEILNVAKGIRSFVQLWNDTVPTESLARAETLVLETPVGPLALAGPSS 159

Query: 327 LLTDFGRVCLQPPGPPGSPGPHAPQLGSLLRALLSLAAPSTTPLAAG 373
              + G       G P SPG H  + G       +L AP+ +P + G
Sbjct: 160 TPQENGTTLWPSRGIPSSPGAHTTEAG-------TLPAPTPSPPSLG 199



 Score = 30.0 bits (66), Expect = 4.8
 Identities = 11/15 (73%), Positives = 11/15 (73%)

Query: 338 PPGPPGSPGPHAPQL 352
           PPGPPG PGP  P L
Sbjct: 773 PPGPPGPPGPPGPGL 787



 Score = 29.3 bits (64), Expect = 8.1
 Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 2/32 (6%)

Query: 338  PPGPPGSPGPHAPQLGSLLRALLSLAAPSTTP 369
            PPGPPG PGP  P      R  +S+  P   P
Sbjct: 1163 PPGPPGPPGP--PSFPGPHRQTISVPGPPGPP 1192


>gi|54860079 nadrin isoform 1 [Homo sapiens]
          Length = 881

 Score = 36.6 bits (83), Expect = 0.051
 Identities = 38/137 (27%), Positives = 53/137 (38%), Gaps = 29/137 (21%)

Query: 3   SPEPPTEPPEPDNPTWSTQPTYSNLGQIRAHLLPSKACRLRTPGSLSTNPEPL-----PP 57
           SP+PPT  P P      TQ T    GQ      PS   +L  P   S++  P+     PP
Sbjct: 667 SPKPPTRSPSP-----PTQHTGQPPGQ------PSAPSQLSAPRRYSSSLSPIQAPNHPP 715

Query: 58  PLPKKILTRTQSLPTRRTLHPSSIQVQPPRRPFLGSHSVDKSQAAVGPACLPAELTFGPA 117
           P P      TQ+ P   T   S     P   P    H +++      P+  P +    P+
Sbjct: 716 PQPP-----TQATPLMHTKPNSQGPPNPMALP--SEHGLEQ------PSHTPPQTPTPPS 762

Query: 118 DAPLGLSLRDLHSPEAV 134
             PLG     L +P+ +
Sbjct: 763 TPPLGKQNPSLPAPQTL 779



 Score = 29.6 bits (65), Expect = 6.2
 Identities = 34/112 (30%), Positives = 46/112 (41%), Gaps = 21/112 (18%)

Query: 4   PEPPTE-----PPEPDNPTWSTQPTYSNLGQIRAHLLPSKACRLRTPGSLSTNPEPLP-- 56
           P PPT+     P  P+ P  S++   S+ G      +PS A      G L   P P    
Sbjct: 526 PLPPTDGSTVVPAGPEPPPQSSRAESSSGGGT----VPSSA------GILEQGPSPGDGS 575

Query: 57  PPLPKKILTRTQSLPTRRTLHPSSIQVQPPRRPFLGSHSVDKSQA--AVGPA 106
           PP PK  ++     P R     +S Q QP  +   GSH +   Q   A GP+
Sbjct: 576 PPKPKDPVSAAVPAPGRNNSQIASGQNQP--QAAAGSHQLSMGQPHNAAGPS 625


>gi|54860105 nadrin isoform 2 [Homo sapiens]
          Length = 803

 Score = 36.6 bits (83), Expect = 0.051
 Identities = 38/137 (27%), Positives = 53/137 (38%), Gaps = 29/137 (21%)

Query: 3   SPEPPTEPPEPDNPTWSTQPTYSNLGQIRAHLLPSKACRLRTPGSLSTNPEPL-----PP 57
           SP+PPT  P P      TQ T    GQ      PS   +L  P   S++  P+     PP
Sbjct: 589 SPKPPTRSPSP-----PTQHTGQPPGQ------PSAPSQLSAPRRYSSSLSPIQAPNHPP 637

Query: 58  PLPKKILTRTQSLPTRRTLHPSSIQVQPPRRPFLGSHSVDKSQAAVGPACLPAELTFGPA 117
           P P      TQ+ P   T   S     P   P    H +++      P+  P +    P+
Sbjct: 638 PQPP-----TQATPLMHTKPNSQGPPNPMALP--SEHGLEQ------PSHTPPQTPTPPS 684

Query: 118 DAPLGLSLRDLHSPEAV 134
             PLG     L +P+ +
Sbjct: 685 TPPLGKQNPSLPAPQTL 701


>gi|14196445 calcium/calmodulin-dependent protein kinase IG [Homo
           sapiens]
          Length = 476

 Score = 36.6 bits (83), Expect = 0.051
 Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 9/75 (12%)

Query: 282 ALLLLQLSAALKFLEAWGAALVELRPENLLLVAPRGCATTGPPRLLLTDFGRVCLQPPG- 340
           +L++ Q+ +A+K+L   G    +L+PENLL + P   +     ++++TDFG   ++  G 
Sbjct: 121 SLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENS-----KIMITDFGLSKMEQNGI 175

Query: 341 ---PPGSPGPHAPQL 352
                G+PG  AP++
Sbjct: 176 MSTACGTPGYVAPEV 190


>gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Homo
           sapiens]
          Length = 559

 Score = 36.2 bits (82), Expect = 0.066
 Identities = 38/132 (28%), Positives = 45/132 (34%), Gaps = 10/132 (7%)

Query: 5   EPPTEPPEPDNPTWSTQPTYSNLGQIRAHLLPSKACRLRTPGSLSTNPEPLPPPLPKKIL 64
           EPP  PP          PT  +         P      RTP  +S  P P PPPLP  + 
Sbjct: 277 EPPPPPPMHGAGDAKPIPTCISSATGLIENRPQSPATGRTPVFVSPTPPPPPPPLPSAL- 335

Query: 65  TRTQSLPTRRTLHPSSIQVQPPRRPFLGSHSVDKSQAAVGPACLPAELTFG---PADAPL 121
             T SL    T  P      PP  P     +      AV P   P ++  G   PA  P+
Sbjct: 336 -STSSLRASMTSTPPPPVPPPPPPP-----ATALQAPAVPPPPAPLQIAPGVLHPAPPPI 389

Query: 122 GLSLRDLHSPEA 133
              L     P A
Sbjct: 390 APPLVQPSPPVA 401



 Score = 32.7 bits (73), Expect = 0.73
 Identities = 28/95 (29%), Positives = 37/95 (38%), Gaps = 16/95 (16%)

Query: 1   MSSPEPPTEPPEPDNPTWSTQPTYSNLGQIRAHLLPSKACRLR-TPGSLSTNPEPLPPPL 59
           M+S  PP  PP P  P  + Q          A  +P     L+  PG L   P P+ PPL
Sbjct: 344 MTSTPPPPVPPPPPPPATALQ----------APAVPPPPAPLQIAPGVLHPAPPPIAPPL 393

Query: 60  --PKKILTRTQSLPTRRTLHP---SSIQVQPPRRP 89
             P   + R   +     +HP     +Q  PP  P
Sbjct: 394 VQPSPPVARAAPVCETVPVHPLPQGEVQGLPPPPP 428


>gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Homo
           sapiens]
          Length = 559

 Score = 36.2 bits (82), Expect = 0.066
 Identities = 38/132 (28%), Positives = 45/132 (34%), Gaps = 10/132 (7%)

Query: 5   EPPTEPPEPDNPTWSTQPTYSNLGQIRAHLLPSKACRLRTPGSLSTNPEPLPPPLPKKIL 64
           EPP  PP          PT  +         P      RTP  +S  P P PPPLP  + 
Sbjct: 277 EPPPPPPMHGAGDAKPIPTCISSATGLIENRPQSPATGRTPVFVSPTPPPPPPPLPSAL- 335

Query: 65  TRTQSLPTRRTLHPSSIQVQPPRRPFLGSHSVDKSQAAVGPACLPAELTFG---PADAPL 121
             T SL    T  P      PP  P     +      AV P   P ++  G   PA  P+
Sbjct: 336 -STSSLRASMTSTPPPPVPPPPPPP-----ATALQAPAVPPPPAPLQIAPGVLHPAPPPI 389

Query: 122 GLSLRDLHSPEA 133
              L     P A
Sbjct: 390 APPLVQPSPPVA 401



 Score = 32.7 bits (73), Expect = 0.73
 Identities = 28/95 (29%), Positives = 37/95 (38%), Gaps = 16/95 (16%)

Query: 1   MSSPEPPTEPPEPDNPTWSTQPTYSNLGQIRAHLLPSKACRLR-TPGSLSTNPEPLPPPL 59
           M+S  PP  PP P  P  + Q          A  +P     L+  PG L   P P+ PPL
Sbjct: 344 MTSTPPPPVPPPPPPPATALQ----------APAVPPPPAPLQIAPGVLHPAPPPIAPPL 393

Query: 60  --PKKILTRTQSLPTRRTLHP---SSIQVQPPRRP 89
             P   + R   +     +HP     +Q  PP  P
Sbjct: 394 VQPSPPVARAAPVCETVPVHPLPQGEVQGLPPPPP 428


>gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Homo
           sapiens]
          Length = 559

 Score = 36.2 bits (82), Expect = 0.066
 Identities = 38/132 (28%), Positives = 45/132 (34%), Gaps = 10/132 (7%)

Query: 5   EPPTEPPEPDNPTWSTQPTYSNLGQIRAHLLPSKACRLRTPGSLSTNPEPLPPPLPKKIL 64
           EPP  PP          PT  +         P      RTP  +S  P P PPPLP  + 
Sbjct: 277 EPPPPPPMHGAGDAKPIPTCISSATGLIENRPQSPATGRTPVFVSPTPPPPPPPLPSAL- 335

Query: 65  TRTQSLPTRRTLHPSSIQVQPPRRPFLGSHSVDKSQAAVGPACLPAELTFG---PADAPL 121
             T SL    T  P      PP  P     +      AV P   P ++  G   PA  P+
Sbjct: 336 -STSSLRASMTSTPPPPVPPPPPPP-----ATALQAPAVPPPPAPLQIAPGVLHPAPPPI 389

Query: 122 GLSLRDLHSPEA 133
              L     P A
Sbjct: 390 APPLVQPSPPVA 401



 Score = 32.7 bits (73), Expect = 0.73
 Identities = 28/95 (29%), Positives = 37/95 (38%), Gaps = 16/95 (16%)

Query: 1   MSSPEPPTEPPEPDNPTWSTQPTYSNLGQIRAHLLPSKACRLR-TPGSLSTNPEPLPPPL 59
           M+S  PP  PP P  P  + Q          A  +P     L+  PG L   P P+ PPL
Sbjct: 344 MTSTPPPPVPPPPPPPATALQ----------APAVPPPPAPLQIAPGVLHPAPPPIAPPL 393

Query: 60  --PKKILTRTQSLPTRRTLHP---SSIQVQPPRRP 89
             P   + R   +     +HP     +Q  PP  P
Sbjct: 394 VQPSPPVARAAPVCETVPVHPLPQGEVQGLPPPPP 428


>gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Homo
           sapiens]
          Length = 559

 Score = 36.2 bits (82), Expect = 0.066
 Identities = 38/132 (28%), Positives = 45/132 (34%), Gaps = 10/132 (7%)

Query: 5   EPPTEPPEPDNPTWSTQPTYSNLGQIRAHLLPSKACRLRTPGSLSTNPEPLPPPLPKKIL 64
           EPP  PP          PT  +         P      RTP  +S  P P PPPLP  + 
Sbjct: 277 EPPPPPPMHGAGDAKPIPTCISSATGLIENRPQSPATGRTPVFVSPTPPPPPPPLPSAL- 335

Query: 65  TRTQSLPTRRTLHPSSIQVQPPRRPFLGSHSVDKSQAAVGPACLPAELTFG---PADAPL 121
             T SL    T  P      PP  P     +      AV P   P ++  G   PA  P+
Sbjct: 336 -STSSLRASMTSTPPPPVPPPPPPP-----ATALQAPAVPPPPAPLQIAPGVLHPAPPPI 389

Query: 122 GLSLRDLHSPEA 133
              L     P A
Sbjct: 390 APPLVQPSPPVA 401



 Score = 32.7 bits (73), Expect = 0.73
 Identities = 28/95 (29%), Positives = 37/95 (38%), Gaps = 16/95 (16%)

Query: 1   MSSPEPPTEPPEPDNPTWSTQPTYSNLGQIRAHLLPSKACRLR-TPGSLSTNPEPLPPPL 59
           M+S  PP  PP P  P  + Q          A  +P     L+  PG L   P P+ PPL
Sbjct: 344 MTSTPPPPVPPPPPPPATALQ----------APAVPPPPAPLQIAPGVLHPAPPPIAPPL 393

Query: 60  --PKKILTRTQSLPTRRTLHP---SSIQVQPPRRP 89
             P   + R   +     +HP     +Q  PP  P
Sbjct: 394 VQPSPPVARAAPVCETVPVHPLPQGEVQGLPPPPP 428


>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
          Length = 1263

 Score = 36.2 bits (82), Expect = 0.066
 Identities = 37/138 (26%), Positives = 48/138 (34%), Gaps = 41/138 (29%)

Query: 2   SSPEPPTEPPEPDNPTWSTQPTYSNLGQIRAHLLPSKACRLRTP----GSLSTNPEPL-- 55
           ++P PP  PP P  P                  LP   C    P    G+  + P PL  
Sbjct: 597 TTPPPPPPPPPPPPP------------------LPGGVCISSPPSLPGGTAISPPPPLSG 638

Query: 56  ------PPPLPKKI-LTRTQSLPTRRTLH-----PSSIQVQPPRRPFLGSHSVDKSQAAV 103
                 PPPLP+ + +    SLP    +      P S ++ PP  P  GS  +       
Sbjct: 639 DATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPP---- 694

Query: 104 GPACLPAELTFGPADAPL 121
            P  LP E    P   PL
Sbjct: 695 -PPPLPGEAGMPPPPPPL 711


>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
          Length = 1272

 Score = 36.2 bits (82), Expect = 0.066
 Identities = 37/138 (26%), Positives = 48/138 (34%), Gaps = 41/138 (29%)

Query: 2   SSPEPPTEPPEPDNPTWSTQPTYSNLGQIRAHLLPSKACRLRTP----GSLSTNPEPL-- 55
           ++P PP  PP P  P                  LP   C    P    G+  + P PL  
Sbjct: 606 TTPPPPPPPPPPPPP------------------LPGGVCISSPPSLPGGTAISPPPPLSG 647

Query: 56  ------PPPLPKKI-LTRTQSLPTRRTLH-----PSSIQVQPPRRPFLGSHSVDKSQAAV 103
                 PPPLP+ + +    SLP    +      P S ++ PP  P  GS  +       
Sbjct: 648 DATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPP---- 703

Query: 104 GPACLPAELTFGPADAPL 121
            P  LP E    P   PL
Sbjct: 704 -PPPLPGEAGMPPPPPPL 720


>gi|239753435 PREDICTED: hypothetical protein XP_002345651 [Homo
           sapiens]
          Length = 218

 Score = 36.2 bits (82), Expect = 0.066
 Identities = 20/78 (25%), Positives = 34/78 (43%)

Query: 4   PEPPTEPPEPDNPTWSTQPTYSNLGQIRAHLLPSKACRLRTPGSLSTNPEPLPPPLPKKI 63
           P PP  PP+P +P    Q   +    I    + S A    +    ST P PL  P+ + +
Sbjct: 61  PLPPPRPPKPPSPLGLAQSKVTLFPSISPSSMASLAALASSSLLKSTKPNPLEDPVSRSV 120

Query: 64  LTRTQSLPTRRTLHPSSI 81
               ++ P+  + + SS+
Sbjct: 121 TILARTEPSNDSFNVSSV 138


>gi|239747993 PREDICTED: hypothetical protein XP_002346504 [Homo
           sapiens]
          Length = 218

 Score = 36.2 bits (82), Expect = 0.066
 Identities = 20/78 (25%), Positives = 34/78 (43%)

Query: 4   PEPPTEPPEPDNPTWSTQPTYSNLGQIRAHLLPSKACRLRTPGSLSTNPEPLPPPLPKKI 63
           P PP  PP+P +P    Q   +    I    + S A    +    ST P PL  P+ + +
Sbjct: 61  PLPPPRPPKPPSPLGLAQSKVTLFPSISPSSMASLAALASSSLLKSTKPNPLEDPVSRSV 120

Query: 64  LTRTQSLPTRRTLHPSSI 81
               ++ P+  + + SS+
Sbjct: 121 TILARTEPSNDSFNVSSV 138


>gi|239741891 PREDICTED: hypothetical protein XP_002342316 [Homo
           sapiens]
          Length = 218

 Score = 36.2 bits (82), Expect = 0.066
 Identities = 20/78 (25%), Positives = 34/78 (43%)

Query: 4   PEPPTEPPEPDNPTWSTQPTYSNLGQIRAHLLPSKACRLRTPGSLSTNPEPLPPPLPKKI 63
           P PP  PP+P +P    Q   +    I    + S A    +    ST P PL  P+ + +
Sbjct: 61  PLPPPRPPKPPSPLGLAQSKVTLFPSISPSSMASLAALASSSLLKSTKPNPLEDPVSRSV 120

Query: 64  LTRTQSLPTRRTLHPSSI 81
               ++ P+  + + SS+
Sbjct: 121 TILARTEPSNDSFNVSSV 138


>gi|14790190 spen homolog, transcriptional regulator [Homo sapiens]
          Length = 3664

 Score = 36.2 bits (82), Expect = 0.066
 Identities = 31/121 (25%), Positives = 45/121 (37%), Gaps = 18/121 (14%)

Query: 4    PEPPTEPPEPDNPTWSTQPTYSNLGQIRAHLLPSKACRLRTPGSLSTNPEPLPPPLPKKI 63
            P P  EP +P  P  STQP             P+  C    P  L    +P  PP  K  
Sbjct: 3344 PPPEGEPLQPPQPVQSTQPAQ-----------PAPPC---PPSQLG---QPGQPPSSKMP 3386

Query: 64   LTRTQSLPTRRTLHPSSIQVQPPRRPFLGSHSVDKSQAAVGPACLPAELTFG-PADAPLG 122
                ++  T+  +    +   P  RP      V ++QA  GP   P+ ++     D P+ 
Sbjct: 3387 QVSQEAKGTQTGVEQPRLPAGPANRPPEPHTQVQRAQAETGPTSFPSPVSVSMKPDLPVS 3446

Query: 123  L 123
            L
Sbjct: 3447 L 3447


>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
            sapiens]
          Length = 5537

 Score = 36.2 bits (82), Expect = 0.066
 Identities = 48/178 (26%), Positives = 68/178 (38%), Gaps = 30/178 (16%)

Query: 45   PGSLSTNP-----EPLPPPLPKKILTRTQSLPTRRTLHPSSIQVQP--PRRPFLGSHSVD 97
            PG+LST P      P PPP   +   R   LP+  +  P+  Q+ P  P  P     +++
Sbjct: 4293 PGALSTGPVLGPVHPTPPPSSPQEPKRPSQLPSPSSQLPTEAQLPPTHPGTPKPQGPTLE 4352

Query: 98   KSQAAVGPACLPAELTF-----GPADAPLGL---------SLRDLHS--------PEAVH 135
                 V PA      T      GP D P  L         SL   H         PEA  
Sbjct: 4353 PPPGRVSPAAAQLADTLFSKGLGPWDPPDNLAETQKPEQSSLVPGHLDQVNGQVVPEASQ 4412

Query: 136  TALAARQLQGLRTIYARLRARLMGGHPGPCHPGHSFRLLDSSPCAESGDALYYRVVRA 193
             ++     +    + A+   R   G P    PG S  LL + P +E+G  L  +++RA
Sbjct: 4413 LSIKQEPREEPCALGAQSVKREANGEPIGA-PGTSNHLLLAGPRSEAGHLLLQKLLRA 4469



 Score = 31.6 bits (70), Expect = 1.6
 Identities = 34/122 (27%), Positives = 45/122 (36%), Gaps = 15/122 (12%)

Query: 5   EPPTEPPEPDNPTWSTQPTYSNLGQIRAHLLP--SKACRLRTPGSLSTNPEPLPPPL--- 59
           E P   P P+ P  S QP  S       HL P   + C    P     +PE   PPL   
Sbjct: 811 EEPHLSPVPEEPCLSPQPEES-------HLSPQSEEPCLSPRPEESHLSPELEKPPLSPR 863

Query: 60  PKKILTRTQSLPTRRTLHPSSIQVQPPRRPFLGSHSV-DKSQAAVGPACLPAELTFGPAD 118
           P+K        P    L       +P   P LG  ++ +  +  + P  LP EL   P+ 
Sbjct: 864 PEKPPEEPGQCPAPEELPLFPPPGEPSLSPLLGEPALSEPGEPPLSP--LPEELPLSPSG 921

Query: 119 AP 120
            P
Sbjct: 922 EP 923



 Score = 29.3 bits (64), Expect = 8.1
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 8/48 (16%)

Query: 44   TPGSLSTNPEPLPPPLP---KKILTRTQSLPTRRTLHPSSIQVQPPRR 88
            TP S++T P  + P L    + +L + Q  P      PSS+Q+QPP R
Sbjct: 4054 TPESMATEPGEVKPSLSGDSQLLLVQPQPQP-----QPSSLQLQPPLR 4096


>gi|163965366 nascent polypeptide-associated complex alpha subunit
            isoform a [Homo sapiens]
          Length = 2078

 Score = 36.2 bits (82), Expect = 0.066
 Identities = 80/333 (24%), Positives = 107/333 (32%), Gaps = 29/333 (8%)

Query: 49   STNPEPLPPPLPKKILTRTQSLPTRRTLHPSSIQVQPPRRPFLGSHSVDKSQAAVGPACL 108
            ++ P    PP PK     T  LP      P++    P   P   S       A   PA  
Sbjct: 1032 ASTPPAATPPSPKGSPAATP-LPKGAPTTPAATLPSPKGGPATPS----LKGAPTPPAAT 1086

Query: 109  PAELTFGPAD-APLGLSLRDLHSPEAVHTALAARQLQGLRTIYARLRARLMGGHPGPCHP 167
            P     GPA  +P G  +    +P +    LA    +G  T  A       GG   P   
Sbjct: 1087 PPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPK 1146

Query: 168  GHSFRLLDSSPCAESGDALYYRVVRAHEDAWHILVAKVPKPGADVPHPWGLELQASLSPH 227
            G       + P  + G A           A        PK G   P P G     + +P 
Sbjct: 1147 GAPTTPAATPPSPKGGLATPPPKGAPTTPA---ATPPSPKGGLATPSPKGAPTTPAATPP 1203

Query: 228  FNLQGLCGLVPEGT------LPGAPWRGAVAL-----AAEVPERTVAQWLAEACTQPPEE 276
                GL    P+G        P +P +G +A      A   P  T         T PP+ 
Sbjct: 1204 SPKGGLATPSPKGAPTTPAATPPSP-KGGLATPSPKGAPTTPAATPPSPKGGPATPPPKG 1262

Query: 277  FVWAVALLLLQLSAALKFLEAWGAALVELRPENLLLVAPRGCATTGPPRLLLTDFGRVCL 336
                 A     L   L      GA      P  +   +P+G   T PP+   T       
Sbjct: 1263 APTPPAATPPSLKGGLATPPHKGAP----NPAVVTPPSPKGGPATSPPKGAPTP---PAA 1315

Query: 337  QPPGPPGSPGPHAPQLGSLLRALLSLAAPSTTP 369
             PP P GSPG   P+ G+     ++  +P  TP
Sbjct: 1316 TPPSPKGSPGTPPPK-GAPTPPAVTPPSPKGTP 1347


>gi|27597078 TYRO3 protein tyrosine kinase [Homo sapiens]
          Length = 890

 Score = 35.4 bits (80), Expect = 0.11
 Identities = 21/41 (51%), Positives = 25/41 (60%), Gaps = 2/41 (4%)

Query: 339 PGPPGSPGPHAPQLGSLLRALLSLAAPSTTPLAAGLELLAA 379
           PG P  P P  P+LG LL AL SL  P +   AAGL+L+ A
Sbjct: 10  PGLPPLPLPPPPRLGLLLAALASLLLPESA--AAGLKLMGA 48


>gi|226437579 NAC alpha domain containing [Homo sapiens]
          Length = 1562

 Score = 35.0 bits (79), Expect = 0.15
 Identities = 54/231 (23%), Positives = 73/231 (31%), Gaps = 39/231 (16%)

Query: 4   PEPPTEPPEPDNPTWSTQPTYSNLGQIRAHLLPSKACRLRTPGSLSTNPEPLPPPLPKKI 63
           P  P   P+P+  +W   P  +          PS       PG    +P  LP  L  + 
Sbjct: 58  PSKPGARPQPEGASWDAGPGGA----------PSAWA---DPGEGGPSPMLLPEGLSSQA 104

Query: 64  LTRTQSLPTRRTLHPSSIQVQPPRRPFLGSHSV-----DKSQAAVGPACLPAELTFGPAD 118
           L+    LP   TL P  +  +   +  L   +      D+      P   P   + G   
Sbjct: 105 LSTEAPLPA--TLEPRIVMGEETCQALLSPRAARTALRDQEGGHASPDPPPELCSQGDLS 162

Query: 119 APLGLSLRDLHSPEAVHTALAARQLQGLRTIYARLRARLMGGHPGPCHPGHSFRLLDSSP 178
            P         SP     +         +T YA L A    G            LLDS P
Sbjct: 163 VP---------SPPPDPDSFFTPPSTPTKTTYALLPACGPHGDARDSEAELRDELLDSPP 213

Query: 179 CAESGDALYYRVVRAHEDAWHI-----LVAKVPKPGADVPHPWGLELQASL 224
            + SG       + A  D+W       L    P  G D P  WGL  Q S+
Sbjct: 214 ASPSGS-----YITADGDSWASSPSCSLSLLAPAEGLDFPSGWGLSPQGSM 259


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.136    0.437 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,811,874
Number of Sequences: 37866
Number of extensions: 1493285
Number of successful extensions: 12006
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 261
Number of HSP's that attempted gapping in prelim test: 9406
Number of HSP's gapped (non-prelim): 2745
length of query: 473
length of database: 18,247,518
effective HSP length: 106
effective length of query: 367
effective length of database: 14,233,722
effective search space: 5223775974
effective search space used: 5223775974
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press