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Search of human proteins with 38348215
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|38348215 embigin [Homo sapiens]
(327 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|38348215 embigin [Homo sapiens] 662 0.0
gi|9257240 neuroplastin isoform a precursor [Homo sapiens] 69 6e-12
gi|6912646 neuroplastin isoform b precursor [Homo sapiens] 69 6e-12
gi|38372919 basigin isoform 1 precursor [Homo sapiens] 67 2e-11
gi|38372925 basigin isoform 2 precursor [Homo sapiens] 67 2e-11
gi|238624149 neuroplastin isoform d precursor [Homo sapiens] 67 2e-11
gi|238624147 neuroplastin isoform c precursor [Homo sapiens] 67 2e-11
gi|38372923 basigin isoform 4 [Homo sapiens] 62 9e-10
gi|110349719 titin isoform N2-A [Homo sapiens] 51 1e-06
gi|239755187 PREDICTED: similar to hemicentin 2 [Homo sapiens] 47 3e-05
gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens] 47 3e-05
gi|239743951 PREDICTED: hypothetical protein XP_002342997 [Homo ... 47 3e-05
gi|157168355 CD22 molecule [Homo sapiens] 42 7e-04
gi|20127422 Down syndrome cell adhesion molecule isoform CHD2-42... 42 7e-04
gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens] 41 0.001
gi|169177000 PREDICTED: hemicentin 2 [Homo sapiens] 41 0.001
gi|118572606 hemicentin 1 [Homo sapiens] 41 0.001
gi|94420689 neural cell adhesion molecule 1 isoform 1 [Homo sapi... 39 0.006
gi|115529478 neural cell adhesion molecule 1 isoform 3 [Homo sap... 39 0.006
gi|54607118 leucine-rich repeats and immunoglobulin-like domains... 39 0.008
gi|33519481 neural cell adhesion molecule 2 precursor [Homo sapi... 38 0.014
gi|58331253 obscurin, cytoskeletal calmodulin and titin-interact... 37 0.018
gi|148833506 obscurin, cytoskeletal calmodulin and titin-interac... 37 0.018
gi|4507875 vascular cell adhesion molecule 1 isoform a precursor... 36 0.041
gi|166295173 kin of IRRE like [Homo sapiens] 36 0.041
gi|126012571 heparan sulfate proteoglycan 2 [Homo sapiens] 36 0.053
gi|115529482 neural cell adhesion molecule 1 isoform 2 [Homo sap... 36 0.053
gi|7657361 contactin 6 [Homo sapiens] 36 0.053
gi|21359935 Down syndrome cell adhesion molecule like 1 [Homo sa... 35 0.091
gi|9624969 butyrophilin-like 2 [Homo sapiens] 35 0.12
>gi|38348215 embigin [Homo sapiens]
Length = 327
Score = 662 bits (1707), Expect = 0.0
Identities = 327/327 (100%), Positives = 327/327 (100%)
Query: 1 MRALPGLLEARARTPRLLLLQCLLAAARPSSADGSAPDSPFTSPPLREEIMANNFSLESH 60
MRALPGLLEARARTPRLLLLQCLLAAARPSSADGSAPDSPFTSPPLREEIMANNFSLESH
Sbjct: 1 MRALPGLLEARARTPRLLLLQCLLAAARPSSADGSAPDSPFTSPPLREEIMANNFSLESH 60
Query: 61 NISLTEHSSMPVEKNITLERPSNVNLTCQFTTSGDLNAVNVTWKKDGEQLENNYLVSATG 120
NISLTEHSSMPVEKNITLERPSNVNLTCQFTTSGDLNAVNVTWKKDGEQLENNYLVSATG
Sbjct: 61 NISLTEHSSMPVEKNITLERPSNVNLTCQFTTSGDLNAVNVTWKKDGEQLENNYLVSATG 120
Query: 121 STLYTQYRFTIINSKQMGSYSCFFREEKEQRGTFNFKVPELHGKNKPLISYVGDSTVLTC 180
STLYTQYRFTIINSKQMGSYSCFFREEKEQRGTFNFKVPELHGKNKPLISYVGDSTVLTC
Sbjct: 121 STLYTQYRFTIINSKQMGSYSCFFREEKEQRGTFNFKVPELHGKNKPLISYVGDSTVLTC 180
Query: 181 KCQNCFPLNWTWYSSNGSVKVPVGVQMNKYVINGTYANETKLKITQLLEEDGESYWCRAL 240
KCQNCFPLNWTWYSSNGSVKVPVGVQMNKYVINGTYANETKLKITQLLEEDGESYWCRAL
Sbjct: 181 KCQNCFPLNWTWYSSNGSVKVPVGVQMNKYVINGTYANETKLKITQLLEEDGESYWCRAL 240
Query: 241 FQLGESEEHIELVVLSYLVPLKPFLVIVAEVILLVATILLCEKYTQKKKKHSDEGKEFEQ 300
FQLGESEEHIELVVLSYLVPLKPFLVIVAEVILLVATILLCEKYTQKKKKHSDEGKEFEQ
Sbjct: 241 FQLGESEEHIELVVLSYLVPLKPFLVIVAEVILLVATILLCEKYTQKKKKHSDEGKEFEQ 300
Query: 301 IEQLKSDDSNGIENNVPRHRKNESLGQ 327
IEQLKSDDSNGIENNVPRHRKNESLGQ
Sbjct: 301 IEQLKSDDSNGIENNVPRHRKNESLGQ 327
>gi|9257240 neuroplastin isoform a precursor [Homo sapiens]
Length = 282
Score = 68.9 bits (167), Expect = 6e-12
Identities = 63/242 (26%), Positives = 101/242 (41%), Gaps = 17/242 (7%)
Query: 84 VNLTCQFTTSGDLNAVNVTWKKDGEQLENNYLVSATGSTLYT-QYRFTIINSKQMGSYSC 142
V L C T+S + W K+G +L SAT +YR ++ G Y C
Sbjct: 50 VTLQCNLTSSSHTLTYSY-WTKNGVEL------SATRKNASNMEYRINKPRAEDSGEYHC 102
Query: 143 FFREEKEQRGTFNFKV---PELHGKNKPLISYVGDSTVLTCKCQNCFPLNWTWYSS-NGS 198
+ + +V P++ G + G + CK +W W NG
Sbjct: 103 VYHFVSAPKANATIEVKAAPDITGHKRSENKNEGQDATMYCKSVGYPHPDWIWRKKENGM 162
Query: 199 VKVPVGVQMNKYVINGTYANETKLKITQLLEEDGESYWCRALFQLGESEEHIELVVLSYL 258
V ++IN E + Q+ E+ GE Y C A +G + L V S+L
Sbjct: 163 PMDIVNTSGRFFIINKENYTELNIVNLQITEDPGE-YECNATNAIGSASVVTVLRVRSHL 221
Query: 259 VPLKPFLVIVAEVILLVATILLCEKYTQKKKKHSDEGKEFEQIEQLKSDDSNGIENNVPR 318
PL PFL I+AE+I+LV I++ E K+K+ + + E +K++ +N ++ R
Sbjct: 222 APLWPFLGILAEIIILVVIIVVYE----KRKRPDEVPDDDEPAGPMKTNSTNNHKDKNLR 277
Query: 319 HR 320
R
Sbjct: 278 QR 279
>gi|6912646 neuroplastin isoform b precursor [Homo sapiens]
Length = 398
Score = 68.9 bits (167), Expect = 6e-12
Identities = 63/242 (26%), Positives = 101/242 (41%), Gaps = 17/242 (7%)
Query: 84 VNLTCQFTTSGDLNAVNVTWKKDGEQLENNYLVSATGSTLYT-QYRFTIINSKQMGSYSC 142
V L C T+S + W K+G +L SAT +YR ++ G Y C
Sbjct: 166 VTLQCNLTSSSHTLTYSY-WTKNGVEL------SATRKNASNMEYRINKPRAEDSGEYHC 218
Query: 143 FFREEKEQRGTFNFKV---PELHGKNKPLISYVGDSTVLTCKCQNCFPLNWTWYSS-NGS 198
+ + +V P++ G + G + CK +W W NG
Sbjct: 219 VYHFVSAPKANATIEVKAAPDITGHKRSENKNEGQDATMYCKSVGYPHPDWIWRKKENGM 278
Query: 199 VKVPVGVQMNKYVINGTYANETKLKITQLLEEDGESYWCRALFQLGESEEHIELVVLSYL 258
V ++IN E + Q+ E+ GE Y C A +G + L V S+L
Sbjct: 279 PMDIVNTSGRFFIINKENYTELNIVNLQITEDPGE-YECNATNAIGSASVVTVLRVRSHL 337
Query: 259 VPLKPFLVIVAEVILLVATILLCEKYTQKKKKHSDEGKEFEQIEQLKSDDSNGIENNVPR 318
PL PFL I+AE+I+LV I++ E K+K+ + + E +K++ +N ++ R
Sbjct: 338 APLWPFLGILAEIIILVVIIVVYE----KRKRPDEVPDDDEPAGPMKTNSTNNHKDKNLR 393
Query: 319 HR 320
R
Sbjct: 394 QR 395
>gi|38372919 basigin isoform 1 precursor [Homo sapiens]
Length = 385
Score = 67.4 bits (163), Expect = 2e-11
Identities = 66/216 (30%), Positives = 96/216 (44%), Gaps = 33/216 (15%)
Query: 82 SNVNLTCQFTTSGDLNAVNVT---WKKDGEQLENNYLVSATGSTLYTQYRFTIINSKQMG 138
S + LTC S A VT W K G L+ + L + F + + Q G
Sbjct: 151 SKILLTCSLNDS----ATEVTGHRWLKGGVVLKEDALPGQ-------KTEFKVDSDDQWG 199
Query: 139 SYSCFFREEKEQRGTFNFKVPELHGKNKPLISYV--------GDSTVLTCKCQNCFPL-N 189
YSC F E GT N +LHG P + V G++ +L CK ++ P+ +
Sbjct: 200 EYSCVFLPEP--MGTANI---QLHGP--PRVKAVKSSEHINEGETAMLVCKSESVPPVTD 252
Query: 190 WTWYSSNGSV-KVPVGVQMNKYVINGTYANETKLKITQL-LEEDGESYWCRALFQLGESE 247
W WY S K + +++ ++ + ++L I L +E D Y C G +
Sbjct: 253 WAWYKITDSEDKALMNGSESRFFVSSSQGR-SELHIENLNMEADPGQYRCNGTSSKGSDQ 311
Query: 248 EHIELVVLSYLVPLKPFLVIVAEVILLVATILLCEK 283
I L V S+L L PFL IVAEV++LV I + EK
Sbjct: 312 AIITLRVRSHLAALWPFLGIVAEVLVLVTIIFIYEK 347
>gi|38372925 basigin isoform 2 precursor [Homo sapiens]
Length = 269
Score = 67.4 bits (163), Expect = 2e-11
Identities = 66/216 (30%), Positives = 96/216 (44%), Gaps = 33/216 (15%)
Query: 82 SNVNLTCQFTTSGDLNAVNVT---WKKDGEQLENNYLVSATGSTLYTQYRFTIINSKQMG 138
S + LTC S A VT W K G L+ + L + F + + Q G
Sbjct: 35 SKILLTCSLNDS----ATEVTGHRWLKGGVVLKEDALPGQ-------KTEFKVDSDDQWG 83
Query: 139 SYSCFFREEKEQRGTFNFKVPELHGKNKPLISYV--------GDSTVLTCKCQNCFPL-N 189
YSC F E GT N +LHG P + V G++ +L CK ++ P+ +
Sbjct: 84 EYSCVFLPEP--MGTANI---QLHGP--PRVKAVKSSEHINEGETAMLVCKSESVPPVTD 136
Query: 190 WTWYSSNGSV-KVPVGVQMNKYVINGTYANETKLKITQL-LEEDGESYWCRALFQLGESE 247
W WY S K + +++ ++ + ++L I L +E D Y C G +
Sbjct: 137 WAWYKITDSEDKALMNGSESRFFVSSSQGR-SELHIENLNMEADPGQYRCNGTSSKGSDQ 195
Query: 248 EHIELVVLSYLVPLKPFLVIVAEVILLVATILLCEK 283
I L V S+L L PFL IVAEV++LV I + EK
Sbjct: 196 AIITLRVRSHLAALWPFLGIVAEVLVLVTIIFIYEK 231
>gi|238624149 neuroplastin isoform d precursor [Homo sapiens]
Length = 278
Score = 67.0 bits (162), Expect = 2e-11
Identities = 65/249 (26%), Positives = 101/249 (40%), Gaps = 29/249 (11%)
Query: 84 VNLTCQFTTSGDLNAVNVTWKKDGEQLENNYLVSATGSTLYT-QYRFTIINSKQMGSYSC 142
V L C T+S + W K+G +L SAT +YR ++ G Y C
Sbjct: 50 VTLQCNLTSSSHTLTYSY-WTKNGVEL------SATRKNASNMEYRINKPRAEDSGEYHC 102
Query: 143 FFREEKEQRGTFNFKV---PELHGKNKPLISYVGDSTVLTCKCQNCFPLNWTWYSS-NGS 198
+ + +V P++ G + G + CK +W W NG
Sbjct: 103 VYHFVSAPKANATIEVKAAPDITGHKRSENKNEGQDATMYCKSVGYPHPDWIWRKKENGM 162
Query: 199 VKVPVGVQMNKYVINGTYANETKLKITQLLEEDGESYWCRALFQLGESEEHIELVVLSYL 258
V ++IN E + Q+ E+ GE Y C A +G + L V S+L
Sbjct: 163 PMDIVNTSGRFFIINKENYTELNIVNLQITEDPGE-YECNATNAIGSASVVTVLRVRSHL 221
Query: 259 VPLKPFLVIVAEVILLVATILLCEKYTQKKKKHSDEGKEFEQIEQLKSDDSNGIENNVPR 318
PL PFL I+AE+I+LV I++ E K+K DE D+ ++ N
Sbjct: 222 APLWPFLGILAEIIILVVIIVVYE-----KRKRPDE-----------VPDAGPMKTNSTN 265
Query: 319 HRKNESLGQ 327
+ K+++L Q
Sbjct: 266 NHKDKNLRQ 274
>gi|238624147 neuroplastin isoform c precursor [Homo sapiens]
Length = 394
Score = 67.0 bits (162), Expect = 2e-11
Identities = 65/249 (26%), Positives = 101/249 (40%), Gaps = 29/249 (11%)
Query: 84 VNLTCQFTTSGDLNAVNVTWKKDGEQLENNYLVSATGSTLYT-QYRFTIINSKQMGSYSC 142
V L C T+S + W K+G +L SAT +YR ++ G Y C
Sbjct: 166 VTLQCNLTSSSHTLTYSY-WTKNGVEL------SATRKNASNMEYRINKPRAEDSGEYHC 218
Query: 143 FFREEKEQRGTFNFKV---PELHGKNKPLISYVGDSTVLTCKCQNCFPLNWTWYSS-NGS 198
+ + +V P++ G + G + CK +W W NG
Sbjct: 219 VYHFVSAPKANATIEVKAAPDITGHKRSENKNEGQDATMYCKSVGYPHPDWIWRKKENGM 278
Query: 199 VKVPVGVQMNKYVINGTYANETKLKITQLLEEDGESYWCRALFQLGESEEHIELVVLSYL 258
V ++IN E + Q+ E+ GE Y C A +G + L V S+L
Sbjct: 279 PMDIVNTSGRFFIINKENYTELNIVNLQITEDPGE-YECNATNAIGSASVVTVLRVRSHL 337
Query: 259 VPLKPFLVIVAEVILLVATILLCEKYTQKKKKHSDEGKEFEQIEQLKSDDSNGIENNVPR 318
PL PFL I+AE+I+LV I++ E K+K DE D+ ++ N
Sbjct: 338 APLWPFLGILAEIIILVVIIVVYE-----KRKRPDE-----------VPDAGPMKTNSTN 381
Query: 319 HRKNESLGQ 327
+ K+++L Q
Sbjct: 382 NHKDKNLRQ 390
>gi|38372923 basigin isoform 4 [Homo sapiens]
Length = 205
Score = 61.6 bits (148), Expect = 9e-10
Identities = 52/159 (32%), Positives = 76/159 (47%), Gaps = 19/159 (11%)
Query: 136 QMGSYSCFFREEKEQRGTFNFKVPELHGKNKPLISYV--------GDSTVLTCKCQNCFP 187
Q G YSC F E GT N +LHG P + V G++ +L CK ++ P
Sbjct: 17 QWGEYSCVFLPEP--MGTANI---QLHGP--PRVKAVKSSEHINEGETAMLVCKSESVPP 69
Query: 188 L-NWTWYSSNGSV-KVPVGVQMNKYVINGTYANETKLKITQL-LEEDGESYWCRALFQLG 244
+ +W WY S K + +++ ++ + ++L I L +E D Y C G
Sbjct: 70 VTDWAWYKITDSEDKALMNGSESRFFVSSSQGR-SELHIENLNMEADPGQYRCNGTSSKG 128
Query: 245 ESEEHIELVVLSYLVPLKPFLVIVAEVILLVATILLCEK 283
+ I L V S+L L PFL IVAEV++LV I + EK
Sbjct: 129 SDQAIITLRVRSHLAALWPFLGIVAEVLVLVTIIFIYEK 167
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 51.2 bits (121), Expect = 1e-06
Identities = 52/207 (25%), Positives = 81/207 (39%), Gaps = 22/207 (10%)
Query: 84 VNLTCQFTTSGDLNAVNVTWKKDGEQLENNYLVSATGSTLYTQYRFTIINSKQMGSYSCF 143
V+L CQ V VTW KDG++L + K G+Y C
Sbjct: 3661 VHLECQVDED---RKVTVTWSKDGQKLPPGKDYKICFEDKIATLEIPLAKLKDSGTYVCT 3717
Query: 144 FREEKEQRG---TFNFKVPELHGK--NKPLISYVGDSTVLTCKCQNCFPLNWTWYSSNGS 198
E T + P K + + G+S L CK + + TW+ +N
Sbjct: 3718 ASNEAGSSSCSATVTVREPPSFVKKVDPSYLMLPGESARLHCKLKGSPVIQVTWFKNNKE 3777
Query: 199 VKVPVGVQMNKYVINGTYANETKLKITQLLEEDGESYWCRALFQLGESEEHIELVVL--- 255
+ V+M Y +N +E L IT + ED SY C A+ +G E+V+
Sbjct: 3778 LSESNTVRM--YFVN----SEAILDITDVKVEDSGSYSCEAVNDVGSDSCSTEIVIKEPP 3831
Query: 256 SYLVPLKPFLVIVAEVILLVATILLCE 282
S++ L+P A+++ +L CE
Sbjct: 3832 SFIKTLEP-----ADIVRGTNALLQCE 3853
Score = 41.6 bits (96), Expect = 0.001
Identities = 50/187 (26%), Positives = 76/187 (40%), Gaps = 26/187 (13%)
Query: 64 LTEHSSMPVEKNITLERPSNVNLTCQFTTSGDLNAVNVTWKKDGEQLENNYLVSATGSTL 123
L++HS P K+I LE T +G L ++VTWKKDG + + + T
Sbjct: 5992 LSDHSVEP-GKSIILES----------TYTGTL-PISVTWKKDGFNITTSEKCNIV--TT 6037
Query: 124 YTQYRFTIINS--KQMGSYSCFFREE--KEQRGTF--NFKVPELHGKNKPLISYVGDSTV 177
I+NS + G YSC E ++ G + P + +PL + VGDS
Sbjct: 6038 EKTCILEILNSTKRDAGQYSCEIENEAGRDVCGALVSTLEPPYFVTELEPLEAAVGDSVS 6097
Query: 178 LTCKCQNCFPLNWTWYSSNGSVKVPVGVQMNKYVINGTYANETKLKITQLLEEDGESYWC 237
L C+ + +WY G K+ + Y N N L ++ D Y C
Sbjct: 6098 LQCQVAGTPEITVSWY--KGDTKLRPTPEYRTYFTN----NVATLVFNKVNINDSGEYTC 6151
Query: 238 RALFQLG 244
+A +G
Sbjct: 6152 KAENSIG 6158
Score = 38.1 bits (87), Expect = 0.011
Identities = 41/207 (19%), Positives = 81/207 (39%), Gaps = 30/207 (14%)
Query: 88 CQFTTSGDLNAVNVTWKKDGEQLENNYLVSATGSTLYTQYRFTIINSKQMGSYSCFFREE 147
C +T + + W K ++L + T L + ++ + G+Y+C
Sbjct: 4224 CLKSTFQGSTPLTIRWFKGNKELVSGGSCYITKEALESSLELYLVKTSDSGTYTCKVSNV 4283
Query: 148 K-----------EQRGTFNFKVPELHGKNKPLISYVGDSTVLTCKCQNCFPLNWTWYSSN 196
++ TF K+ K GD+T L CK P+ TW++++
Sbjct: 4284 AGGVECSANLFVKEPATFVEKLEPSQLLKK------GDATQLACKVTGTPPIKITWFAND 4337
Query: 197 GSVKVPVGVQMNKYVINGTYANETKLKITQLLEEDGESYWCRALFQLGESEEHIELVVLS 256
+K + +K+ ++ + L++T + ED Y C A + G +H +V+
Sbjct: 4338 REIK-----ESSKHRMSFVESTAV-LRLTDVGIEDSGEYMCEAQNEAG--SDHCSSIVIV 4389
Query: 257 YLVP-----LKPFLVIVAEVILLVATI 278
P KP V+ ++L+A +
Sbjct: 4390 KESPYFTKEFKPIEVLKEYDVMLLAEV 4416
Score = 36.6 bits (83), Expect = 0.031
Identities = 48/204 (23%), Positives = 76/204 (37%), Gaps = 36/204 (17%)
Query: 72 VEKNITLERPSNVNLTCQFT-----TSGDLNAVNVTWKKDGEQL--ENNYLVS----ATG 120
+E +E+P ++ +T T T ++ W KDG++L +N Y +S +G
Sbjct: 7583 LEPATIVEKPESIKVTTGDTCTLECTVAGTPELSTKWFKDGKELTSDNKYKISFFNKVSG 7642
Query: 121 STLYTQ-------YRFTIINSKQMGSYSCFFREEKEQRG---TFNFKVPELHGKNKPLIS 170
+ Y F + N +G SC + R +F K+ E +G +
Sbjct: 7643 LKIINVAPSDSGVYSFEVQNP--VGKDSCTASLQVSDRTVPPSFTRKLKETNGLS----- 7695
Query: 171 YVGDSTVLTCKCQNCFPLNWTWYSSNGSVKVPVGVQMNKYVINGTYANETKLKITQLLEE 230
G S V+ CK P++ +W+ + KY T N L + L E
Sbjct: 7696 --GSSVVMECKVYGSPPISVSWFHEGNEIS-----SGRKYQTTLT-DNTCALTVNMLEES 7747
Query: 231 DGESYWCRALFQLGESEEHIELVV 254
D Y C A G E L V
Sbjct: 7748 DSGDYTCIATNMAGSDECSAPLTV 7771
Score = 35.8 bits (81), Expect = 0.053
Identities = 34/167 (20%), Positives = 64/167 (38%), Gaps = 12/167 (7%)
Query: 99 VNVTWKKDGEQLENNYLVSATGSTLYTQYRFTIINSKQMGSYSCFFREEKEQRGTFNFKV 158
++VTWKK+G + + + T + + G Y+C+ E + + + ++
Sbjct: 7897 ISVTWKKNGINVTPSQRCNITTTEKSAILEIPSSTVEDAGQYNCYI-ENASGKDSCSAQI 7955
Query: 159 -----PELHGKNKPLISYVGDSTVLTCKCQNCFPLNWTWYSSNGSVKVPVGVQMNKYVIN 213
P + +P+ VGDS L C+ + +WY + ++ +M+
Sbjct: 7956 LILEPPYFVKQLEPVKVSVGDSASLQCQLAGTPEIGVSWYKGDTKLRPTTTYKMH----- 8010
Query: 214 GTYANETKLKITQLLEEDGESYWCRALFQLGESEEHIELVVLSYLVP 260
N L Q+ D Y C+A +GE L V +P
Sbjct: 8011 -FRNNVATLVFNQVDINDSGEYICKAENSVGEVSASTFLTVQEQKLP 8056
Score = 35.0 bits (79), Expect = 0.091
Identities = 34/170 (20%), Positives = 66/170 (38%), Gaps = 15/170 (8%)
Query: 99 VNVTWKKDGEQLENNYLVSATGSTLYTQYRFTIINSKQMGSYSCFFREEKEQRGTFNFKV 158
++V+W KDG+ L+++ V + + G YSC + + ++
Sbjct: 8086 ISVSWYKDGKPLKDSPNVQTSFLDNTATLNIFKTDRSLAGQYSCTATNPIGSASS-SARL 8144
Query: 159 PELHGKNKPLI--------SYVGDSTVLTCKCQNCFPLNWTWYSSNGSVKVPVGVQMNKY 210
GKN P + VG+S C P+ +W + ++ KY
Sbjct: 8145 ILTEGKNPPFFDIRLAPVDAVVGESADFECHVTGTQPIKVSWAKDSREIR-----SGGKY 8199
Query: 211 VINGTYANETKLKITQLLEEDGESYWCRALFQLGESEEHIELVVLSYLVP 260
I+ N L + ++ + D Y C A+ ++G+ +L + L+P
Sbjct: 8200 QIS-YLENSAHLTVLKVDKGDSGQYTCYAVNEVGKDSCTAQLNIKERLIP 8248
Score = 33.1 bits (74), Expect = 0.35
Identities = 42/219 (19%), Positives = 81/219 (36%), Gaps = 23/219 (10%)
Query: 52 ANNFSLESHNISLTEHSSMPV---EKNITLERP--------SNVNLTCQFTTSGDLNAVN 100
+ +++ E+HN + + SS + E I ++P ++V+L C+ + +
Sbjct: 7373 SGDYTCEAHNAAGSASSSTSLKVKEPPIFRKKPHPIETLKGADVHLECELQGTPPFH--- 7429
Query: 101 VTWKKDGEQLENNYLVSATGSTLYTQYRFTIINSKQMGSYSCFFREEKEQR---GTFNFK 157
V+W KD +L + T +++ +G Y C + G+ K
Sbjct: 7430 VSWYKDKRELRSGKKYKIMSENFLTSIHILNVDAADIGEYQCKATNDVGSDTCVGSIALK 7489
Query: 158 VPELHGKNKPLIS-YVGDSTVLTCKCQNCFPLNWTWYSSNGSVKVPVGVQMNKYVINGTY 216
P K IS VG L + P++ W+ G + V+ + +
Sbjct: 7490 APPRFVKKLSDISTVVGKEVQLQTTIEGAEPISVVWFKDKGEI-----VRESDNIWISYS 7544
Query: 217 ANETKLKITQLLEEDGESYWCRALFQLGESEEHIELVVL 255
N L+ +++ + Y C+ G E L VL
Sbjct: 7545 ENIATLQFSRVEPANAGKYTCQIKNDAGMQECFATLSVL 7583
Score = 32.3 bits (72), Expect = 0.59
Identities = 33/184 (17%), Positives = 66/184 (35%), Gaps = 18/184 (9%)
Query: 64 LTEHSSMPVEKNITLERPSNVNLTCQFTTSGDLNAVNVTWKKDGEQLENNYLVSATGSTL 123
L + + VEK +++ +T + +G + V W KDG+Q+ + S +
Sbjct: 5136 LVQEPAQIVEKAKSVDVTEKDPMTLECVVAGTPE-LKVKWLKDGKQIVPSRYFSMSFENN 5194
Query: 124 YTQYRFTIINSKQMGSYSCFFREEKE---------QRGTFNFKVPELHGKNKPLISYVGD 174
+R + + G Y+ F+ E + R P K + +G
Sbjct: 5195 VASFRIQSVMKQDSGQYT--FKVENDFGSSSCDAYLRVLDQNIPPSFTKKLTKMDKVLGS 5252
Query: 175 STVLTCKCQNCFPLNWTWYSSNGSVKVPVGVQMNKYVINGTYANETKLKITQLLEEDGES 234
S + CK P++ W+ + ++ + L++ L ED +
Sbjct: 5253 SIHMECKVSGSLPISAQWFKDGKEISTSAKYRL------VCHERSVSLEVNNLELEDTAN 5306
Query: 235 YWCR 238
Y C+
Sbjct: 5307 YTCK 5310
Score = 31.6 bits (70), Expect = 1.0
Identities = 27/122 (22%), Positives = 44/122 (36%), Gaps = 7/122 (5%)
Query: 82 SNVNLTCQFTTSGDLNAVNVTWKKDGEQLENNYLVSATGSTLYTQYRFTIINSKQMGSYS 141
S+V L C+ + + V W KD +Q+ N+ T T + + +G Y
Sbjct: 6473 SDVILQCEISGTPPFEVV---WVKDRKQVRNSKKFKITSKHFDTSLHILNLEASDVGEYH 6529
Query: 142 CFFREEKEQ---RGTFNFKVPELHGKN-KPLISYVGDSTVLTCKCQNCFPLNWTWYSSNG 197
C E + FK P K + +GD+ L + P++ W G
Sbjct: 6530 CKATNEVGSDTCSCSVKFKEPPRFVKKLSDTSTLIGDAVELRAIVEGFQPISVVWLKDRG 6589
Query: 198 SV 199
V
Sbjct: 6590 EV 6591
Score = 30.8 bits (68), Expect = 1.7
Identities = 38/180 (21%), Positives = 59/180 (32%), Gaps = 22/180 (12%)
Query: 83 NVNLTCQFTTSGDLNAVNVTWKKDGEQLENNYLVSATGSTLYTQYRFTIINSKQMGSYSC 142
+V+L CQ + + + V+W K +L + F +N G Y+C
Sbjct: 6095 SVSLQCQVAGTPE---ITVSWYKGDTKLRPTPEYRTYFTNNVATLVFNKVNINDSGEYTC 6151
Query: 143 FFREEKEQRGTFNFKV----------PELHGKNKPLISYVGDSTVLTCKCQNCFPLNWTW 192
+ + GT + K P + K + VG LTC+ P+ W
Sbjct: 6152 ---KAENSIGTASSKTVFRIQERQLPPSFARQLKDIEQTVGLPVTLTCRLNGSAPIQVCW 6208
Query: 193 YSSNGSVKVPVGVQMNKYVINGTYANETKLKITQLLEEDGESYWCRALFQLGESEEHIEL 252
Y ++ +Q N LKI Q Y C A LG + L
Sbjct: 6209 YRDGVLLRDDENLQ------TSFVDNVATLKILQTDLSHSGQYSCSASNPLGTASSSARL 6262
Score = 30.4 bits (67), Expect = 2.2
Identities = 38/182 (20%), Positives = 66/182 (36%), Gaps = 14/182 (7%)
Query: 94 GDLNAVNVTWKKDGEQLENNYLVSATGSTLYTQYRFTIINSKQMGSYSCFFREE----KE 149
G + + W KD ++L + S T + G+Y C +
Sbjct: 4792 GGTAPMTIKWFKDNKELHSGAARSVWKDDTSTSLELFAAKATDSGTYICQLSNDVGTATS 4851
Query: 150 QRGTFNFKVPELHGKNKP-LISYVGDSTVLTCKCQNCFPLNWTWYSSNGSVKVPVGVQMN 208
+ F + P+ K P L+ G ST C+ + +WY + +
Sbjct: 4852 KATLFVKEPPQFIKKPSPVLVLRNGQSTTFECQITGTPKIRVSWYLDGNEI-----TAIQ 4906
Query: 209 KYVINGTYANETKLKITQLLEEDGESYWCRALFQLGESEEHIELVVL---SYLVPLKPFL 265
K+ I+ T +I+ E+ +Y C A G + IEL V +++ LKP
Sbjct: 4907 KHGISFIDGLAT-FQISGARVENSGTYVCEARNDAGTASCSIELKVKEPPTFIRELKPVE 4965
Query: 266 VI 267
V+
Sbjct: 4966 VV 4967
Score = 30.0 bits (66), Expect = 2.9
Identities = 39/176 (22%), Positives = 64/176 (36%), Gaps = 11/176 (6%)
Query: 89 QFTTSGDLNAVNVTWKKDGEQLENNYLVSATGSTLYTQYRFTIINSKQMGSYSCFFREEK 148
Q T G L + VTW KD +++ + + T + I K G Y C + +
Sbjct: 4506 QATLKGSL-PITVTWLKDSDEITEDDNIRMTFENNVASLYLSGIEVKHDGKYVCQAKNDA 4564
Query: 149 E-QRGTFNFKVPELHGKNKPLISY---VGDSTVLTCKCQNCFPLNWTWYSSNGSVKVPVG 204
QR + V E + +S GD L K + W+ + +
Sbjct: 4565 GIQRCSALLSVKEPATITEEAVSIDVTQGDPATLQVKFSGTKEITAKWFKDGQELTLG-- 4622
Query: 205 VQMNKYVINGTYANETKLKITQLLEEDGESYWCRALFQLGESEEHIELVVLSYLVP 260
+KY I+ T + LKI ++D Y +G S + VL ++P
Sbjct: 4623 ---SKYKISVT-DTVSILKIISTEKKDSGEYTFEVQNDVGRSSCKARINVLDLIIP 4674
Score = 30.0 bits (66), Expect = 2.9
Identities = 46/237 (19%), Positives = 79/237 (33%), Gaps = 20/237 (8%)
Query: 82 SNVNLTCQFTTSGDLNAVNVTWKKDGEQLENNYLVSATGSTLYTQYRFTIINSKQMGSYS 141
+ V+L C+ + + V W KD QL ++ +T +++ +G Y
Sbjct: 5532 AEVSLECELSGTPPFEVV---WYKDKRQLRSSKKYKIASKNFHTSIHILNVDTSDIGEYH 5588
Query: 142 CFFREEKEQRG---TFNFK-VPELHGKNKPLISYVGDSTVLTCKCQNCFPLNWTWYSSNG 197
C + E T K P K L G+ L + P+ W
Sbjct: 5589 CKAQNEVGSDTCVCTVKLKEPPRFVSKLNSLTVVAGEPAELQASIEGAQPIFVQWLKEKE 5648
Query: 198 SVKVPVGVQMNKYVINGTYANETKLKITQLLEEDGESYWCRALFQLGESEEHIELVVLSY 257
V ++ ++ + N L+ + + Y C+ G E L+VL
Sbjct: 5649 EV-----IRESENIRITFVENVATLQFAKAEPANAGKYICQIKNDGGMRENMATLMVLEP 5703
Query: 258 LVPLK---PFLVIVAEVILLVATI-----LLCEKYTQKKKKHSDEGKEFEQIEQLKS 306
V ++ P V V E L + L E Y K S + +F ++ S
Sbjct: 5704 AVIVEKAGPMTVTVGETCTLECKVAGTPELSVEWYKDGKLLTSSQKHKFSFYNKISS 5760
Score = 29.6 bits (65), Expect = 3.8
Identities = 29/124 (23%), Positives = 43/124 (34%), Gaps = 16/124 (12%)
Query: 86 LTCQFTTSGDLNAVNVTWKKDGEQLENNYLVSATGSTLYTQYRFTIINSKQMGSYSCFFR 145
L C T + +L+A W KDG +L + T + G YS
Sbjct: 6664 LECVVTGTPELSA---KWFKDGRELSADSKHHITFINKVASLKIPCAEMSDKGLYSF--- 6717
Query: 146 EEKEQRGTFNFKV----------PELHGKNKPLISYVGDSTVLTCKCQNCFPLNWTWYSS 195
E K G N V P K K + + +G S VL C+ P++ W+
Sbjct: 6718 EVKNSVGKSNCTVSVHVSDRIVPPSFIRKLKDVNAILGASVVLECRVSGSAPISVGWFQD 6777
Query: 196 NGSV 199
+
Sbjct: 6778 GNEI 6781
Score = 29.3 bits (64), Expect = 5.0
Identities = 27/100 (27%), Positives = 40/100 (40%), Gaps = 23/100 (23%)
Query: 62 ISLTEHSSMPVEK--NITLERPSNVN-------------LTCQFTTSGDLNAVNVTWKKD 106
+S TE P EK ++ + P + LTC S L A VTW KD
Sbjct: 32696 VSPTETKPTPTEKVQHLPVSAPPKITQFLKAEASKEIAKLTC-VVESSVLRAKEVTWYKD 32754
Query: 107 GEQLENN----YLVSATGSTLYTQYRFTIINSKQMGSYSC 142
G++L+ N + SA G+ + + + G Y C
Sbjct: 32755 GKKLKENGHFQFHYSADGT---YELKINNLTESDQGEYVC 32791
Score = 28.9 bits (63), Expect = 6.5
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Query: 191 TWYSSNGSVKVPVGVQMNKYVINGTYANETKLKITQLLEEDGESYWCRALFQLGESEEHI 250
TWY +K Q + Y +GTY +LKI L E D Y C + G S+ ++
Sbjct: 32750 TWYKDGKKLKENGHFQFH-YSADGTY----ELKINNLTESDQGEYVCEISGEGGTSKTNL 32804
Query: 251 ELV 253
+ +
Sbjct: 32805 QFM 32807
>gi|239755187 PREDICTED: similar to hemicentin 2 [Homo sapiens]
Length = 1215
Score = 46.6 bits (109), Expect = 3e-05
Identities = 37/160 (23%), Positives = 69/160 (43%), Gaps = 20/160 (12%)
Query: 100 NVTWKKDGEQLENNYLVSATGS-TLYTQYRFTIINSKQMGSYSCFFREE----KEQRGTF 154
+++W ++ + L+ + + TL Q + + G+YSC E +E +
Sbjct: 521 HISWSRESQALQEDSRIHVDAQGTLIIQG----VAPEDAGNYSCQATNEVGTDQETVTLY 576
Query: 155 NFKVPELHGKNKPLISYVGDSTVLTCKCQNCFPLNWTWYSSNGSVKVPVGVQMNKYVING 214
P + N ++ VG+ VL C+ P WY G++M ++
Sbjct: 577 YTDPPSVSAVNAVVLVAVGEEAVLVCEASGVPPPRVIWYRG--------GLEM---ILAP 625
Query: 215 TYANETKLKITQLLEEDGESYWCRALFQLGESEEHIELVV 254
++ KL+I E D +Y CRA+ +LG++ I+L V
Sbjct: 626 EGSSSGKLRIPAAQERDAGTYTCRAVNELGDASAEIQLAV 665
>gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 5065
Score = 46.6 bits (109), Expect = 3e-05
Identities = 37/160 (23%), Positives = 69/160 (43%), Gaps = 20/160 (12%)
Query: 100 NVTWKKDGEQLENNYLVSATGS-TLYTQYRFTIINSKQMGSYSCFFREE----KEQRGTF 154
+++W ++ + L+ + + TL Q + + G+YSC E +E +
Sbjct: 638 HISWSRESQALQEDSRIHVDAQGTLIIQG----VAPEDAGNYSCQATNEVGTDQETVTLY 693
Query: 155 NFKVPELHGKNKPLISYVGDSTVLTCKCQNCFPLNWTWYSSNGSVKVPVGVQMNKYVING 214
P + N ++ VG+ VL C+ P WY G++M ++
Sbjct: 694 YTDPPSVSAVNAVVLVAVGEEAVLVCEASGVPPPRVIWYRG--------GLEM---ILAP 742
Query: 215 TYANETKLKITQLLEEDGESYWCRALFQLGESEEHIELVV 254
++ KL+I E D +Y CRA+ +LG++ I+L V
Sbjct: 743 EGSSSGKLRIPAAQERDAGTYTCRAVNELGDASAEIQLAV 782
Score = 41.2 bits (95), Expect = 0.001
Identities = 47/192 (24%), Positives = 77/192 (40%), Gaps = 28/192 (14%)
Query: 79 ERPSNVNLTCQFTTSGDLNAVN-----VTWKKDGEQL--ENNYLVSATGSTLYTQYRFTI 131
E P+ V++ + + NA VTW++DG+ + E + G +L+ +
Sbjct: 2263 EPPTQVSVVQDGVATLECNATGKPPPTVTWERDGQPVGAELGLQLQNQGQSLHVERA--- 2319
Query: 132 INSKQMGSYSCFFREEKEQRGTFNFKV-----PELHGKNKPLISYVG---DSTVLTCKCQ 183
+ G YSC E R F++ PEL G PL + L C+
Sbjct: 2320 -QAAHTGRYSCV-AENLAGRAERKFELSVLVPPELIGDLDPLTNITAALHSPLTLLCEAM 2377
Query: 184 NCFPLNWTWYSSNGSVKVPVGVQMNKYVINGTYANETKLKITQLLEEDGESYWCRALFQL 243
P W+ + PV + Y++ G + LK+TQ E+D Y C A +
Sbjct: 2378 GIPPPAIRWFRG----EEPVSPGEDTYLLAGGWM----LKMTQTQEQDSGLYSCLASNEA 2429
Query: 244 GESEEHIELVVL 255
GE+ + + VL
Sbjct: 2430 GEARRNFSVEVL 2441
Score = 36.2 bits (82), Expect = 0.041
Identities = 42/187 (22%), Positives = 73/187 (39%), Gaps = 23/187 (12%)
Query: 84 VNLTCQFTTSGDLNAVNVTWKKDGEQLENNYLVSATGSTLYTQYRFTIINSKQM---GSY 140
V LTC T + + + W KDG + G ++ R + S + G Y
Sbjct: 1995 VRLTCNATGAP---SPTLMWLKDGNPVSP---AGTPGLQVFPGGRVLTLASARASDSGRY 2048
Query: 141 SCF----FREEKEQRGTFNFKVPELHGKNKPLISYVGDSTVLTCKCQNCFPLNWTWYSSN 196
SC E+++ P + G+ + +S L C+ P +W+
Sbjct: 2049 SCVAVSAVGEDRQDVVLQVHMPPSILGEELNVSVVANESVALECQSHAMPPPVLSWWKDG 2108
Query: 197 GSVKVPVGVQMNKYVINGTYANETKLKITQLLEEDGESYWCRALFQLGESEEHIELVVLS 256
++ GV ++ A++ L++ + D Y C AL Q G SE+H L V
Sbjct: 2109 RPLEPRPGVHLS--------ADKALLQVDRADVWDAGHYTCEALNQAGHSEKHYNLNV-- 2158
Query: 257 YLVPLKP 263
++ P+ P
Sbjct: 2159 WVAPVFP 2165
Score = 29.3 bits (64), Expect = 5.0
Identities = 36/141 (25%), Positives = 58/141 (41%), Gaps = 23/141 (16%)
Query: 135 KQMGSYSCFF----REEKEQRGTFNFKVPELHGKNKPLISYVGDSTVLTCKCQNCFPLNW 190
+++G +S F REE+ + G ++ +N P Y C P +
Sbjct: 2734 QKVGDFSAAFEILSREEEARGGVTEYREIV---ENNPAYLY--------CDTNAIPPPDL 2782
Query: 191 TWYSSNGSVKVPVGVQMNKYVINGTYANETKLKITQLLEEDGESYWCRALFQLGESEEHI 250
TWY + P+ V+ G L+I + E+ Y C+A ++GE H
Sbjct: 2783 TWYREDQ----PLSAGDEVSVLQGGRV----LQIPLVRAENAGRYSCKASNEVGEDWLHY 2834
Query: 251 ELVVLSYLVPLKPFLVIVAEV 271
EL+VL+ V L +V EV
Sbjct: 2835 ELLVLTPPVILGDTEELVEEV 2855
Score = 28.9 bits (63), Expect = 6.5
Identities = 38/168 (22%), Positives = 63/168 (37%), Gaps = 27/168 (16%)
Query: 101 VTWKKDGEQLENN--YLVSATGSTLYTQYRFTIINSKQMGSYSCFFREEKEQRGTFNFKV 158
+TW KDG L + +S G L N G YSC ++ T +F++
Sbjct: 2477 LTWFKDGRPLARGDAHHISPDGVLLQVLQA----NLSSAGHYSCIAANAVGEK-TKHFQL 2531
Query: 159 PEL----------HGKNKPLISYVGDSTVLTCKCQNCFPLNWTWYSSNGSVKVPVGVQMN 208
L ++ + V + L C+ N TW P N
Sbjct: 2532 SVLLAPTILGGAEDSADEEVTVTVNNPISLICEALAFPSPNITWMKDGA----PFEASRN 2587
Query: 209 KYVINGTYANETKLKITQLLEEDGESYWCRALFQLGESEE--HIELVV 254
++ GT+ L+I +ED Y C +LGE+ + H+E+++
Sbjct: 2588 IQLLPGTHG----LQILNAQKEDAGQYTCVVTNELGEAVKNYHVEVLI 2631
Score = 28.5 bits (62), Expect = 8.5
Identities = 41/196 (20%), Positives = 70/196 (35%), Gaps = 32/196 (16%)
Query: 73 EKNITLERPSNVNLTCQFTTSGDLNAVNVTWKKDGEQLENNYLVSATGSTLYTQYRFTII 132
E +T+ P ++L C+ + N+TW KDG E + + T + I+
Sbjct: 2550 EVTVTVNNP--ISLICEALA---FPSPNITWMKDGAPFEASRNIQLLPGT----HGLQIL 2600
Query: 133 NSKQ--MGSYSCFFREEKEQRGTFNFKV----PELHGKNKPL--------ISYVGDSTVL 178
N+++ G Y+C E + N+ V P K+ PL + V + L
Sbjct: 2601 NAQKEDAGQYTCVVTNELGE-AVKNYHVEVLIPPSISKDDPLGEVGVKEVKTKVNSTLTL 2659
Query: 179 TCKCQNCFPLNWTWYSSNGSVKVPVGVQMNKYVINGTYANETKLKITQLLEEDGESYWCR 238
C+ P WY V +Q+ L+I D Y C
Sbjct: 2660 ECESWAVPPPTIRWYKDGQPVTPSSRLQV--------LGEGRLLQIQPTQVSDSGRYLCV 2711
Query: 239 ALFQLGESEEHIELVV 254
A GE ++ +++
Sbjct: 2712 ATNVAGEDDQDFNVLI 2727
>gi|239743951 PREDICTED: hypothetical protein XP_002342997 [Homo
sapiens]
Length = 790
Score = 46.6 bits (109), Expect = 3e-05
Identities = 37/160 (23%), Positives = 69/160 (43%), Gaps = 20/160 (12%)
Query: 100 NVTWKKDGEQLENNYLVSATGS-TLYTQYRFTIINSKQMGSYSCFFREE----KEQRGTF 154
+++W ++ + L+ + + TL Q + + G+YSC E +E +
Sbjct: 637 HISWSRESQALQEDSRIHVDAQGTLIIQG----VAPEDAGNYSCQATNEVGTDQETVTLY 692
Query: 155 NFKVPELHGKNKPLISYVGDSTVLTCKCQNCFPLNWTWYSSNGSVKVPVGVQMNKYVING 214
P + N ++ VG+ VL C+ P WY G++M ++
Sbjct: 693 YTDPPSVSAVNAVVLVAVGEEAVLVCEASGVPPPRVIWYRG--------GLEM---ILAP 741
Query: 215 TYANETKLKITQLLEEDGESYWCRALFQLGESEEHIELVV 254
++ KL+I E D +Y CRA+ +LG++ I+L V
Sbjct: 742 EGSSSGKLRIPAAQERDAGTYTCRAVNELGDASAEIQLAV 781
>gi|157168355 CD22 molecule [Homo sapiens]
Length = 847
Score = 42.0 bits (97), Expect = 7e-04
Identities = 39/184 (21%), Positives = 73/184 (39%), Gaps = 35/184 (19%)
Query: 82 SNVNLTCQFTTSGDLNAVNVTWKKDGEQLENNYLVSATGSTLYTQYRFTIINSKQMGSYS 141
++V+L C F++S V W+K+G L +Q F I+ + GSYS
Sbjct: 523 NSVSLQCDFSSSHP-KEVQFFWEKNGRLLGKE-----------SQLNFDSISPEDAGSYS 570
Query: 142 CFFREEKEQRGTFNFKVPELHGKNKPLISYV-------GDSTVLTCKCQNCFPLN-WTWY 193
C+ Q + + + L+ + +S G S LTC+ P++ +TW+
Sbjct: 571 CWVNNSIGQTASKAWTLEVLYAPRRLRVSMSPGDQVMEGKSATLTCESDANPPVSHYTWF 630
Query: 194 SSNGSVKVPVGVQMNKYVINGTYANETKLKITQLLEEDGESYWCRALFQLGESEEHIELV 253
N +P Q KL++ + + +YWC+ +G+ + +
Sbjct: 631 DWNNQ-SLPYHSQ--------------KLRLEPVKVQHSGAYWCQGTNSVGKGRSPLSTL 675
Query: 254 VLSY 257
+ Y
Sbjct: 676 TVYY 679
>gi|20127422 Down syndrome cell adhesion molecule isoform CHD2-42
precursor [Homo sapiens]
Length = 2012
Score = 42.0 bits (97), Expect = 7e-04
Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 11/158 (6%)
Query: 93 SGDLNAVNVTWKKDGEQLENNYLVSATGSTLYTQYRFTIINSKQMGSYSCFFREEK---E 149
SGDL + +TW+KDG + + V+ + R + ++ G+Y+C R E E
Sbjct: 621 SGDL-PITITWQKDGRPIPGSLGVTIDNIDFTSSLRISNLSLMHNGNYTCIARNEAAAVE 679
Query: 150 QRGTFNFKV-PELHGKNKPLISYVGDSTVLTCKCQNCFPLNWTWYSSNGSVKVPVGVQMN 208
+ +V P+ + + G + +L C + W S G+ VP Q
Sbjct: 680 HQSQLIVRVPPKFVVQPRDQDGIYGKAVILNCSAEGYPVPTIVWKFSKGA-GVP---QFQ 735
Query: 209 KYVING--TYANETKLKITQLLEEDGESYWCRALFQLG 244
+NG + L I ++EED Y C+ +G
Sbjct: 736 PIALNGRIQVLSNGSLLIKHVVEEDSGYYLCKVSNDVG 773
Score = 29.3 bits (64), Expect = 5.0
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Query: 82 SNVNLTCQFTTSGDLNAVNVTWKKDGEQLENNYLVSATGSTLYTQYRFTIINSKQMGSYS 141
S V+L+C T + D ++W ++GE L V TG ++ S G+Y
Sbjct: 329 SQVSLSCSVTGTEDQE---LSWYRNGEILNPGKNVRITGINHENLIMDHMVKSDG-GAYQ 384
Query: 142 CFFREEK 148
CF R++K
Sbjct: 385 CFVRKDK 391
>gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 3874
Score = 41.2 bits (95), Expect = 0.001
Identities = 47/192 (24%), Positives = 77/192 (40%), Gaps = 28/192 (14%)
Query: 79 ERPSNVNLTCQFTTSGDLNAVN-----VTWKKDGEQL--ENNYLVSATGSTLYTQYRFTI 131
E P+ V++ + + NA VTW++DG+ + E + G +L+ +
Sbjct: 1072 EPPTQVSVVQDGVATLECNATGKPPPTVTWERDGQPVGAELGLQLQNQGQSLHVERA--- 1128
Query: 132 INSKQMGSYSCFFREEKEQRGTFNFKV-----PELHGKNKPLISYVG---DSTVLTCKCQ 183
+ G YSC E R F++ PEL G PL + L C+
Sbjct: 1129 -QAAHTGRYSCV-AENLAGRAERKFELSVLVPPELIGDLDPLTNITAALHSPLTLLCEAM 1186
Query: 184 NCFPLNWTWYSSNGSVKVPVGVQMNKYVINGTYANETKLKITQLLEEDGESYWCRALFQL 243
P W+ + PV + Y++ G + LK+TQ E+D Y C A +
Sbjct: 1187 GIPPPAIRWFRG----EEPVSPGEDTYLLAGGWM----LKMTQTQEQDSGLYSCLASNEA 1238
Query: 244 GESEEHIELVVL 255
GE+ + + VL
Sbjct: 1239 GEARRNFSVEVL 1250
Score = 36.2 bits (82), Expect = 0.041
Identities = 42/187 (22%), Positives = 73/187 (39%), Gaps = 23/187 (12%)
Query: 84 VNLTCQFTTSGDLNAVNVTWKKDGEQLENNYLVSATGSTLYTQYRFTIINSKQM---GSY 140
V LTC T + + + W KDG + G ++ R + S + G Y
Sbjct: 804 VRLTCNATGAP---SPTLMWLKDGNPVSP---AGTPGLQVFPGGRVLTLASARASDSGRY 857
Query: 141 SCF----FREEKEQRGTFNFKVPELHGKNKPLISYVGDSTVLTCKCQNCFPLNWTWYSSN 196
SC E+++ P + G+ + +S L C+ P +W+
Sbjct: 858 SCVAVSAVGEDRQDVVLQVHMPPSILGEELNVSVVANESVALECQSHAMPPPVLSWWKDG 917
Query: 197 GSVKVPVGVQMNKYVINGTYANETKLKITQLLEEDGESYWCRALFQLGESEEHIELVVLS 256
++ GV ++ A++ L++ + D Y C AL Q G SE+H L V
Sbjct: 918 RPLEPRPGVHLS--------ADKALLQVDRADVWDAGHYTCEALNQAGRSEKHYNLNV-- 967
Query: 257 YLVPLKP 263
++ P+ P
Sbjct: 968 WVAPVFP 974
Score = 29.3 bits (64), Expect = 5.0
Identities = 36/141 (25%), Positives = 58/141 (41%), Gaps = 23/141 (16%)
Query: 135 KQMGSYSCFF----REEKEQRGTFNFKVPELHGKNKPLISYVGDSTVLTCKCQNCFPLNW 190
+++G +S F REE+ + G ++ +N P Y C P +
Sbjct: 1543 QKVGDFSAAFEILSREEEARGGVTEYREIV---ENNPAYLY--------CDTNAIPPPDL 1591
Query: 191 TWYSSNGSVKVPVGVQMNKYVINGTYANETKLKITQLLEEDGESYWCRALFQLGESEEHI 250
TWY + P+ V+ G L+I + E+ Y C+A ++GE H
Sbjct: 1592 TWYREDQ----PLSAGDEVSVLQGGRV----LQIPLVRAENAGRYSCKASNEVGEDWLHY 1643
Query: 251 ELVVLSYLVPLKPFLVIVAEV 271
EL+VL+ V L +V EV
Sbjct: 1644 ELLVLTPPVILGDTEELVEEV 1664
Score = 28.9 bits (63), Expect = 6.5
Identities = 38/168 (22%), Positives = 63/168 (37%), Gaps = 27/168 (16%)
Query: 101 VTWKKDGEQLENN--YLVSATGSTLYTQYRFTIINSKQMGSYSCFFREEKEQRGTFNFKV 158
+TW KDG L + +S G L N G YSC ++ T +F++
Sbjct: 1286 LTWFKDGRPLARGDAHHISPDGVLLQVLQA----NLSSAGHYSCIAANAVGEK-TKHFQL 1340
Query: 159 PEL----------HGKNKPLISYVGDSTVLTCKCQNCFPLNWTWYSSNGSVKVPVGVQMN 208
L ++ + V + L C+ N TW P N
Sbjct: 1341 SVLLAPTILGGAEDSADEEVTVTVNNPISLICEALAFPSPNITWMKDGA----PFEASRN 1396
Query: 209 KYVINGTYANETKLKITQLLEEDGESYWCRALFQLGESEE--HIELVV 254
++ GT+ L+I +ED Y C +LGE+ + H+E+++
Sbjct: 1397 IQLLPGTHG----LQILNAQKEDAGQYTCVVTNELGEAVKNYHVEVLI 1440
Score = 28.5 bits (62), Expect = 8.5
Identities = 41/196 (20%), Positives = 70/196 (35%), Gaps = 32/196 (16%)
Query: 73 EKNITLERPSNVNLTCQFTTSGDLNAVNVTWKKDGEQLENNYLVSATGSTLYTQYRFTII 132
E +T+ P ++L C+ + N+TW KDG E + + T + I+
Sbjct: 1359 EVTVTVNNP--ISLICEALA---FPSPNITWMKDGAPFEASRNIQLLPGT----HGLQIL 1409
Query: 133 NSKQ--MGSYSCFFREEKEQRGTFNFKV----PELHGKNKPL--------ISYVGDSTVL 178
N+++ G Y+C E + N+ V P K+ PL + V + L
Sbjct: 1410 NAQKEDAGQYTCVVTNELGE-AVKNYHVEVLIPPSISKDDPLGEVGVKEVKTKVNSTLTL 1468
Query: 179 TCKCQNCFPLNWTWYSSNGSVKVPVGVQMNKYVINGTYANETKLKITQLLEEDGESYWCR 238
C+ P WY V +Q+ L+I D Y C
Sbjct: 1469 ECESWAVPPPTIRWYKDGQPVTPSSRLQV--------LGEGRLLQIQPTQVSDSGRYLCV 1520
Query: 239 ALFQLGESEEHIELVV 254
A GE ++ +++
Sbjct: 1521 ATNVAGEDDQDFNVLI 1536
>gi|169177000 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 3783
Score = 41.2 bits (95), Expect = 0.001
Identities = 47/192 (24%), Positives = 77/192 (40%), Gaps = 28/192 (14%)
Query: 79 ERPSNVNLTCQFTTSGDLNAVN-----VTWKKDGEQL--ENNYLVSATGSTLYTQYRFTI 131
E P+ V++ + + NA VTW++DG+ + E + G +L+ +
Sbjct: 981 EPPTQVSVVQDGVATLECNATGKPPPTVTWERDGQPVGAELGLQLQNQGQSLHVERA--- 1037
Query: 132 INSKQMGSYSCFFREEKEQRGTFNFKV-----PELHGKNKPLISYVG---DSTVLTCKCQ 183
+ G YSC E R F++ PEL G PL + L C+
Sbjct: 1038 -QAAHTGRYSCV-AENLAGRAERKFELSVLVPPELIGDLDPLTNITAALHSPLTLLCEAM 1095
Query: 184 NCFPLNWTWYSSNGSVKVPVGVQMNKYVINGTYANETKLKITQLLEEDGESYWCRALFQL 243
P W+ + PV + Y++ G + LK+TQ E+D Y C A +
Sbjct: 1096 GIPPPAIRWFRG----EEPVSPGEDTYLLAGGWM----LKMTQTQEQDSGLYSCLASNEA 1147
Query: 244 GESEEHIELVVL 255
GE+ + + VL
Sbjct: 1148 GEARRNFSVEVL 1159
Score = 36.2 bits (82), Expect = 0.041
Identities = 42/187 (22%), Positives = 73/187 (39%), Gaps = 23/187 (12%)
Query: 84 VNLTCQFTTSGDLNAVNVTWKKDGEQLENNYLVSATGSTLYTQYRFTIINSKQM---GSY 140
V LTC T + + + W KDG + G ++ R + S + G Y
Sbjct: 713 VRLTCNATGAP---SPTLMWLKDGNPVSP---AGTPGLQVFPGGRVLTLASARASDSGRY 766
Query: 141 SCF----FREEKEQRGTFNFKVPELHGKNKPLISYVGDSTVLTCKCQNCFPLNWTWYSSN 196
SC E+++ P + G+ + +S L C+ P +W+
Sbjct: 767 SCVAVSAVGEDRQDVVLQVHMPPSILGEELNVSVVANESVALECQSHAMPPPVLSWWKDG 826
Query: 197 GSVKVPVGVQMNKYVINGTYANETKLKITQLLEEDGESYWCRALFQLGESEEHIELVVLS 256
++ GV ++ A++ L++ + D Y C AL Q G SE+H L V
Sbjct: 827 RPLEPRPGVHLS--------ADKALLQVDRADVWDAGHYTCEALNQAGHSEKHYNLNV-- 876
Query: 257 YLVPLKP 263
++ P+ P
Sbjct: 877 WVAPVFP 883
Score = 29.3 bits (64), Expect = 5.0
Identities = 41/196 (20%), Positives = 70/196 (35%), Gaps = 32/196 (16%)
Query: 73 EKNITLERPSNVNLTCQFTTSGDLNAVNVTWKKDGEQLENNYLVSATGSTLYTQYRFTII 132
E +T+ P ++L C+ + N+TW KDG E + + T + I+
Sbjct: 1268 EVTVTVNNP--ISLICEALA---FPSPNITWMKDGAPFEASRNIQLLPGT----HGLQIL 1318
Query: 133 NSKQ--MGSYSCFFREEKEQRGTFNFKV----PELHGKNKPLI--------SYVGDSTVL 178
N+++ G Y+C E + N+ V P K+ PL + V + L
Sbjct: 1319 NAQKEDAGQYTCVVTNELGE-AVKNYHVEVLIPPSISKDDPLAEVGVKEVKTKVNSTLTL 1377
Query: 179 TCKCQNCFPLNWTWYSSNGSVKVPVGVQMNKYVINGTYANETKLKITQLLEEDGESYWCR 238
C+ P WY V +Q+ L+I D Y C
Sbjct: 1378 ECESWAVPPPTIRWYKDGQPVTPSSRLQV--------LGEGRLLQIQPTQVSDSGRYLCV 1429
Query: 239 ALFQLGESEEHIELVV 254
A GE ++ +++
Sbjct: 1430 ATNVAGEDDQDFNVLI 1445
Score = 29.3 bits (64), Expect = 5.0
Identities = 36/141 (25%), Positives = 58/141 (41%), Gaps = 23/141 (16%)
Query: 135 KQMGSYSCFF----REEKEQRGTFNFKVPELHGKNKPLISYVGDSTVLTCKCQNCFPLNW 190
+++G +S F REE+ + G ++ +N P Y C P +
Sbjct: 1452 QKVGDFSAAFEILSREEEARGGVTEYREIV---ENNPAYLY--------CDTNAIPPPDL 1500
Query: 191 TWYSSNGSVKVPVGVQMNKYVINGTYANETKLKITQLLEEDGESYWCRALFQLGESEEHI 250
TWY + P+ V+ G L+I + E+ Y C+A ++GE H
Sbjct: 1501 TWYREDQ----PLSAGDEVSVLQGGRV----LQIPLVRAENAGRYSCKASNEVGEDWLHY 1552
Query: 251 ELVVLSYLVPLKPFLVIVAEV 271
EL+VL+ V L +V EV
Sbjct: 1553 ELLVLTPPVILGDTEELVEEV 1573
Score = 28.9 bits (63), Expect = 6.5
Identities = 38/168 (22%), Positives = 63/168 (37%), Gaps = 27/168 (16%)
Query: 101 VTWKKDGEQLENN--YLVSATGSTLYTQYRFTIINSKQMGSYSCFFREEKEQRGTFNFKV 158
+TW KDG L + +S G L N G YSC ++ T +F++
Sbjct: 1195 LTWFKDGRPLARGDAHHISPDGVLLQVLQA----NLSSAGHYSCIAANAVGEK-TKHFQL 1249
Query: 159 PEL----------HGKNKPLISYVGDSTVLTCKCQNCFPLNWTWYSSNGSVKVPVGVQMN 208
L ++ + V + L C+ N TW P N
Sbjct: 1250 SVLLAPTILGGAEDSADEEVTVTVNNPISLICEALAFPSPNITWMKDGA----PFEASRN 1305
Query: 209 KYVINGTYANETKLKITQLLEEDGESYWCRALFQLGESEE--HIELVV 254
++ GT+ L+I +ED Y C +LGE+ + H+E+++
Sbjct: 1306 IQLLPGTHG----LQILNAQKEDAGQYTCVVTNELGEAVKNYHVEVLI 1349
>gi|118572606 hemicentin 1 [Homo sapiens]
Length = 5635
Score = 41.2 bits (95), Expect = 0.001
Identities = 43/197 (21%), Positives = 78/197 (39%), Gaps = 24/197 (12%)
Query: 74 KNITLERPSNVNLTCQFTTSGDLNAVNVTWKKDGEQLENNYLVSATGSTLYTQYRFTIIN 133
+++ ++ +V LTC+ T + +TW KDG+ L+ + + Q T +
Sbjct: 2487 EDVKVKEKQSVTLTCEVTGNP---VPEITWHKDGQPLQEDEAHHIISGGRFLQ--ITNVQ 2541
Query: 134 SKQMGSYSCFFRE---EKEQRGTFN-FKVPEL-----HGKNKPLISYVGDSTVLTCKCQN 184
G Y+C K + + N F P + G + + + T L C+ +
Sbjct: 2542 VPHTGRYTCLASSPAGHKSRSFSLNVFVSPTIAGVGSDGNPEDVTVILNSPTSLVCEAYS 2601
Query: 185 CFPLNWTWYSSNGSVKVPVGVQMNKYVINGTYANETKLKITQLLEEDGESYWCRALFQLG 244
P TW+ P+ N ++ G L+I E++ Y C A + G
Sbjct: 2602 YPPATITWFKDG----TPLESNRNIRILPGGRT----LQILNAQEDNAGRYSCVATNEAG 2653
Query: 245 ESEEHIELVVLSYLVPL 261
E +H E+ V Y+ P+
Sbjct: 2654 EMIKHYEVKV--YIPPI 2668
Score = 39.7 bits (91), Expect = 0.004
Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 23/162 (14%)
Query: 102 TWKKDGEQL--ENNYLVSATGSTLYTQYRFTIINSK--QMGSYSCFFREEK-EQRGTFNF 156
+W+KDG+ L ++++ + G L I+N++ +G Y C + FN
Sbjct: 2905 SWQKDGQPLLEDDHHKFLSNGRILQ------ILNTQITDIGRYVCVAENTAGSAKKYFNL 2958
Query: 157 KV---PELHG-KNKPLISYVGDSTVLTCKCQNCFPLNWTWYSSNGSVKVPVGVQMNKYVI 212
V P + G K++ L V + LTC+ P + +W + + P+ + N ++
Sbjct: 2959 NVHVPPSVIGPKSENLTVVVNNFISLTCEVSGFPPPDLSWLKN----EQPIKLNTNTLIV 3014
Query: 213 NGTYANETKLKITQLLEEDGESYWCRALFQLGESEEHIELVV 254
G L+I + DG Y C A+ Q GES++ L V
Sbjct: 3015 PGGRT----LQIIRAKVSDGGEYTCIAINQAGESKKKFSLTV 3052
Score = 34.7 bits (78), Expect = 0.12
Identities = 36/173 (20%), Positives = 71/173 (41%), Gaps = 22/173 (12%)
Query: 84 VNLTCQFTTSGDLNAVNVTWKKDGEQLENNYLVSATGSTLYTQYRFTIINSKQM---GSY 140
V L C+ + + A ++TW KDG + + + G + + R + S Q+ G Y
Sbjct: 2029 VRLECE---ARGIPAPSLTWLKDGSPVSS----FSNGLQVLSGGRILALTSAQISDTGRY 2081
Query: 141 SCF-FREEKEQRGTFNFKV---PELHGKNKPLISYVGDSTVLTCKCQNCFPLNWTWYSSN 196
+C E++ + +V P + G+ + + + + L C+ P TW
Sbjct: 2082 TCVAVNAAGEKQRDIDLRVYVPPNIMGEEQNVSVLISQAVELLCQSDAIPPPTLTWLKDG 2141
Query: 197 GSVKVPVGVQMNKYVINGTYANETKLKITQLLEEDGESYWCRALFQLGESEEH 249
+ G+ +++ N + LKI +D Y C A G++E++
Sbjct: 2142 HPLLKKPGLSISE--------NRSVLKIEDAQVQDTGRYTCEATNVAGKTEKN 2186
Score = 34.3 bits (77), Expect = 0.16
Identities = 52/217 (23%), Positives = 82/217 (37%), Gaps = 27/217 (12%)
Query: 74 KNITLERPSNVNLTCQFTTSGDLNAVNVTWKKDGEQLENNYLVSATGSTLYTQYRFTIIN 133
++IT+ R V L C+ S + +TW ++GE+L+ V Y Q IN
Sbjct: 3629 RDITVLRNRQVTLECK---SDAVPPPVITWLRNGERLQATPRVRILSGGRYLQ-----IN 3680
Query: 134 SKQMG---SYSCFF-----REEKEQRGTFNFKVPELHGKNKPLISYVGDSTVLTCKCQNC 185
+ +G +Y+C + +E T N P + G + L+ + STVL C +
Sbjct: 3681 NADLGDTANYTCVASNIAGKTTREFILTVNVP-PNIKGGPQSLVILLNKSTVLECIAEGV 3739
Query: 186 FPLNWTWYSSNGSVKVPVGVQMNKYVINGTYANETKLKITQLLEEDGESYWCRALFQLGE 245
TW V G ++ + + +T D Y C A G
Sbjct: 3740 PTPRITWRKDGA---VLAGNHARYSILENGFLHIQSAHVT-----DTGRYLCMATNAAGT 3791
Query: 246 SEEHIELVVLSYLVPLKPFLVIVAEVILLVATILLCE 282
I+L V ++ P VI+ V T L CE
Sbjct: 3792 DRRRIDLQV--HVPPSIAPGPTNMTVIVNVQTTLACE 3826
Score = 31.6 bits (70), Expect = 1.0
Identities = 31/124 (25%), Positives = 50/124 (40%), Gaps = 12/124 (9%)
Query: 135 KQMGSYSCFFREEK---EQRGTFNF-KVPELHGKNKPLISYVGDSTVLTCKCQNCFPLNW 190
K G Y C +Q T + + P+L L+ +GD TV+ CK P
Sbjct: 674 KDAGIYGCLASNSAGTDKQNSTLRYIEAPKLMVVQSELLVALGDITVMECKTSGIPPPQV 733
Query: 191 TWYSSNGSVKVPVGVQMNKYVINGTYANETKLKITQLLEEDGESYWCRALFQLGESEEHI 250
W+ K + ++ + ++I K++ TQ L D Y C A+ + G + I
Sbjct: 734 KWF------KGDLELRPSTFLIIDPLLGLLKIQETQDL--DAGDYTCVAINEAGRATGKI 785
Query: 251 ELVV 254
L V
Sbjct: 786 TLDV 789
Score = 28.9 bits (63), Expect = 6.5
Identities = 46/190 (24%), Positives = 72/190 (37%), Gaps = 33/190 (17%)
Query: 74 KNITLERPSNVNLTCQFTTSGDLNAVNVTWKKDGEQLEN--NYLVSATGSTLYTQYRFTI 131
+++T+ S +L C+ + +TW KDG LE+ N + G TL I
Sbjct: 2583 EDVTVILNSPTSLVCE---AYSYPPATITWFKDGTPLESNRNIRILPGGRTL------QI 2633
Query: 132 INSKQ--MGSYSCFFREEK-EQRGTFNFKV--PELHGKN---------KPLISYVGDSTV 177
+N+++ G YSC E E + KV P + K K + V ++
Sbjct: 2634 LNAQEDNAGRYSCVATNEAGEMIKHYEVKVYIPPIINKGDLWGPGLSPKEVKIKVNNTLT 2693
Query: 178 LTCKCQNCFPLNWTWYSSNGSVKVPVGVQMNKYVINGTYANETKLKITQLLEEDGESYWC 237
L C+ + +WY +K V + AN L+I + D Y C
Sbjct: 2694 LECEAYAIPSASLSWYKDGQPLKSDDHVNI--------AANGHTLQIKEAQISDTGRYTC 2745
Query: 238 RALFQLGESE 247
A GE E
Sbjct: 2746 VASNIAGEDE 2755
Score = 28.5 bits (62), Expect = 8.5
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 222 LKITQLLEEDGESYWCRALFQLGESEEHIELVV 254
L+I + L ED Y C A GE+++HI+L V
Sbjct: 1883 LQIAKTLLEDAGRYTCVATNAAGETQQHIQLHV 1915
Score = 28.5 bits (62), Expect = 8.5
Identities = 42/202 (20%), Positives = 77/202 (38%), Gaps = 37/202 (18%)
Query: 74 KNITLERPSNVNLTCQFTTSGDLNAVNVTWKKDGEQL--ENNYLVSATGSTLYTQYRFTI 131
K + ++ + + L C+ + + +++W KDG+ L +++ ++A G TL +
Sbjct: 2682 KEVKIKVNNTLTLECEAYA---IPSASLSWYKDGQPLKSDDHVNIAANGHTLQIKEA--- 2735
Query: 132 INSKQMGSYSCFFRE---EKEQRGTFNFKVPEL---------------HGKNKPLISYVG 173
G Y+C E E N +VP +G+ K +I +
Sbjct: 2736 -QISDTGRYTCVASNIAGEDELDFDVNIQVPPSFQKLWEIGNMLDTGRNGEAKDVI--IN 2792
Query: 174 DSTVLTCKCQNCFPLNWTWYSSNGSVKVPVGVQMNKYVINGTYANETKLKITQLLEEDGE 233
+ L C+ P TWY P+ ++ G L+I + ED
Sbjct: 2793 NPISLYCETNAAPPPTLTWYKDGH----PLTSSDKVLILPGGRV----LQIPRAKVEDAG 2844
Query: 234 SYWCRALFQLGESEEHIELVVL 255
Y C A+ + GE ++ VL
Sbjct: 2845 RYTCVAVNEAGEDSLQYDVRVL 2866
>gi|94420689 neural cell adhesion molecule 1 isoform 1 [Homo
sapiens]
Length = 848
Score = 38.9 bits (89), Expect = 0.006
Identities = 44/194 (22%), Positives = 75/194 (38%), Gaps = 27/194 (13%)
Query: 75 NITLERPSNVNLTCQFTTSGDLNAVNVTWKKDGEQLE-----NNYLVSATGSTLYTQYRF 129
N T +V L C + ++W KDGEQ+E Y+ S S Q
Sbjct: 222 NATANLGQSVTLVCD---AEGFPEPTMSWTKDGEQIEQEEDDEKYIFSDDSS----QLTI 274
Query: 130 TIINSKQMGSYSCFFREEK-EQRGTFNFKVPELHGKNKPLISYVGDST--------VLTC 180
++ Y C + EQ T + KV KP I+YV + T LTC
Sbjct: 275 KKVDKNDEAEYICIAENKAGEQDATIHLKV-----FAKPKITYVENQTAMELEEQVTLTC 329
Query: 181 KCQNCFPLNWTWYSSNGSVKVPVGVQMNKYVINGTYANETKLKITQLLEEDGESYWCRAL 240
+ + TW +S ++ ++ +++ ++A + L + + D Y C A
Sbjct: 330 EASGDPIPSITWRTSTRNISSEEKT-LDGHMVVRSHARVSSLTLKSIQYTDAGEYICTAS 388
Query: 241 FQLGESEEHIELVV 254
+G+ + + L V
Sbjct: 389 NTIGQDSQSMYLEV 402
>gi|115529478 neural cell adhesion molecule 1 isoform 3 [Homo
sapiens]
Length = 761
Score = 38.9 bits (89), Expect = 0.006
Identities = 44/194 (22%), Positives = 75/194 (38%), Gaps = 27/194 (13%)
Query: 75 NITLERPSNVNLTCQFTTSGDLNAVNVTWKKDGEQLE-----NNYLVSATGSTLYTQYRF 129
N T +V L C + ++W KDGEQ+E Y+ S S Q
Sbjct: 222 NATANLGQSVTLVCD---AEGFPEPTMSWTKDGEQIEQEEDDEKYIFSDDSS----QLTI 274
Query: 130 TIINSKQMGSYSCFFREEK-EQRGTFNFKVPELHGKNKPLISYVGDST--------VLTC 180
++ Y C + EQ T + KV KP I+YV + T LTC
Sbjct: 275 KKVDKNDEAEYICIAENKAGEQDATIHLKV-----FAKPKITYVENQTAMELEEQVTLTC 329
Query: 181 KCQNCFPLNWTWYSSNGSVKVPVGVQMNKYVINGTYANETKLKITQLLEEDGESYWCRAL 240
+ + TW +S ++ ++ +++ ++A + L + + D Y C A
Sbjct: 330 EASGDPIPSITWRTSTRNISSEEKT-LDGHMVVRSHARVSSLTLKSIQYTDAGEYICTAS 388
Query: 241 FQLGESEEHIELVV 254
+G+ + + L V
Sbjct: 389 NTIGQDSQSMYLEV 402
>gi|54607118 leucine-rich repeats and immunoglobulin-like domains 1
[Homo sapiens]
Length = 1093
Score = 38.5 bits (88), Expect = 0.008
Identities = 58/259 (22%), Positives = 92/259 (35%), Gaps = 34/259 (13%)
Query: 50 IMANNF-SLESHNISLTEH---SSMPVEKNITLERPSNVNLTCQFTTSGDLNAVNVTWKK 105
++ N+F S SH LT + S +IT+ + L C T G N + W+K
Sbjct: 578 VITNHFGSTYSHKARLTVNVLPSFTKTPHDITIRTTTMARLECAAT--GHPNP-QIAWQK 634
Query: 106 DG-----EQLENNYLVSATGSTLYTQYRFTIINSKQMGSYSCFFREEK---EQRGTFN-F 156
DG E V + T + G YSC + T
Sbjct: 635 DGGTDFPAARERRMHVMPDDDVFF----ITDVKIDDAGVYSCTAQNSAGSISANATLTVL 690
Query: 157 KVPELHGKNKPLISYVGDSTVLTCKCQNCFPLNWTWYSSNGSVKVPVGVQMNKYVINGTY 216
+ P L + + VG++ L CK P TW+ + P+ + ++
Sbjct: 691 ETPSLVVPLEDRVVSVGETVALQCKATGNPPPRITWFKGDR----PLSLTERHHLT---- 742
Query: 217 ANETKLKITQLLEEDGESYWCRALFQLGESEEHIELVVLSYLVPLKP------FLVIVAE 270
+ L + ++ ED Y C LG H +L VL K F + V
Sbjct: 743 PDNQLLVVQNVVAEDAGRYTCEMSNTLGTERAHSQLSVLPAAGCRKDGTTVGIFTIAVVS 802
Query: 271 VILLVATILLCEKYTQKKK 289
I+L + + +C Y +KK
Sbjct: 803 SIVLTSLVWVCIIYQTRKK 821
>gi|33519481 neural cell adhesion molecule 2 precursor [Homo
sapiens]
Length = 837
Score = 37.7 bits (86), Expect = 0.014
Identities = 33/143 (23%), Positives = 60/143 (41%), Gaps = 22/143 (15%)
Query: 132 INSKQMGSYSCFFREEKEQRGTFNFKVPELHGKNKPLISYV----------GDSTVLTCK 181
IN G Y C R E RG +F+ + P IS G+ +C+
Sbjct: 176 INKSDEGIYRCEGRVEA--RGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCR 233
Query: 182 CQNCFPLNWTWYSSNGSVKVPVGVQMNKYVINGTYANETKLKITQLLEEDGESYWCRALF 241
+W+ + ++ + KY++ G+ T+L + ++ DG Y CRA
Sbjct: 234 ASGSPEPAISWFRNGKLIE-----ENEKYILKGS---NTELTVRNIINSDGGPYVCRATN 285
Query: 242 QLGESEEH--IELVVLSYLVPLK 262
+ GE E+ +++ V +++ LK
Sbjct: 286 KAGEDEKQAFLQVFVQPHIIQLK 308
>gi|58331253 obscurin, cytoskeletal calmodulin and titin-interacting
RhoGEF isoform a [Homo sapiens]
Length = 6620
Score = 37.4 bits (85), Expect = 0.018
Identities = 60/253 (23%), Positives = 104/253 (41%), Gaps = 39/253 (15%)
Query: 49 EIMANNFSLESHNISLTEHSSMPVEKNI-TLERPSNVNLTCQFTTSGDLNA------VNV 101
+ +A +S E+ + L+ H + K + E+P++ + + TS L+ V
Sbjct: 1506 QAVAGEYSCEAGSQRLSFHLHVAEPKAVFAKEQPASREVQAEAGTSATLSCEVAQAQTEV 1565
Query: 102 TWKKDGEQLENNYLV--SATGSTLYTQYRFTIINSKQ--MGSYSCFFREEKEQRGTFNFK 157
TW KDG++L ++ V A G T R + + Q G YSC + +QR +F+
Sbjct: 1566 TWYKDGKKLSSSSKVRMEAVGCT----RRLVVQEAGQADAGEYSC---KAGDQRLSFHLH 1618
Query: 158 VPE---LHGKNKP----LISYVGDSTVLTCKCQNCFPLNWTWYSSNGSVKVPVGVQMNKY 210
V E + K +P + + G S L+C+ TWY + V++
Sbjct: 1619 VAEPKVVFAKEQPAHREVQAEAGASATLSCEVAQA-QTEVTWYKDGKKLSSSSKVRVE-- 1675
Query: 211 VINGTYANETKLKITQLLEEDGESYWC-----RALFQLGESEEHIELVVLSYLVPLKPFL 265
+L + Q + D Y C R F+L +E +E + +P +
Sbjct: 1676 ----AVGCTRRLVVQQAGQADAGEYSCEAGGQRLSFRLHVAE--LEPQISERPCRREPLV 1729
Query: 266 VIVAEVILLVATI 278
V E I+L AT+
Sbjct: 1730 VKEHEDIILTATL 1742
Score = 33.5 bits (75), Expect = 0.26
Identities = 44/204 (21%), Positives = 75/204 (36%), Gaps = 26/204 (12%)
Query: 59 SHNISLTEHSSM-----PVEKNITLERPSNVNLTCQFTTSGDLNAVNVTWKKDGEQLENN 113
S + +TE M V + E ++ L+C+ + VTW KDG++L ++
Sbjct: 1062 SFRLHITEPKMMFAKEQSVHNEVQAEAGASAMLSCEVAQA----QTEVTWYKDGKKLSSS 1117
Query: 114 YLVSATGSTLYTQYRFTIINSKQMGSYSCFFREEKEQRGTFNFKVPELHG-------KNK 166
V + G YSC E QR +F+ + E G +
Sbjct: 1118 SKVGMEVKGCTRRLVLPQAGKADAGEYSC---EAGGQRVSFHLHITEPKGVFAKEQSVHN 1174
Query: 167 PLISYVGDSTVLTCKCQNCFPLNWTWYSSNGSVKVPVGVQMNKYVINGTYANETKLKITQ 226
+ + G + +L+C+ TWY + V+M + G +L + Q
Sbjct: 1175 EVQAEAGTTAMLSCEVAQP-QTEVTWYKDGKKLSSSSKVRME---VKGC---TRRLVVQQ 1227
Query: 227 LLEEDGESYWCRALFQLGESEEHI 250
+ + D Y C A Q + HI
Sbjct: 1228 VGKADAGEYSCEAGGQRVSFQLHI 1251
Score = 32.3 bits (72), Expect = 0.59
Identities = 36/175 (20%), Positives = 61/175 (34%), Gaps = 21/175 (12%)
Query: 72 VEKNITLERPSNVNLTCQFTTSGDLNAVNVTWKKDGEQLENNYLVSATGSTLYTQYRFTI 131
V + E ++ L+C+ + VTW KDG++L ++ V + Q
Sbjct: 1264 VHNEVRTEAGASATLSCEVAQA----QTEVTWYKDGKKLSSSSKVRIEAAGCMRQLVVQQ 1319
Query: 132 INSKQMGSYSCFFREEKEQRGTFNFKVPELHG-------KNKPLISYVGDSTVLTCKCQN 184
G Y+C E QR +F+ V E ++ + + G L+C+
Sbjct: 1320 AGQADAGEYTC---EAGGQRLSFHLDVSEPKAVFAKEQLAHRKVQAEAGAIATLSCEVAQ 1376
Query: 185 CFPLNWTWYSSNGSVKVPVGVQMNKYVINGTYANETKLKITQLLEEDGESYWCRA 239
TWY + V+M +L + Q + D Y C A
Sbjct: 1377 A-QTEVTWYKDGKKLSSSSKVRME------AVGCTRRLVVQQACQADTGEYSCEA 1424
Score = 31.6 bits (70), Expect = 1.0
Identities = 46/188 (24%), Positives = 72/188 (38%), Gaps = 29/188 (15%)
Query: 74 KNITLERPSNVNLTCQFTTSGDLNAVNVTWKKDGEQLENNYLV--SATGSTLYTQYRFTI 131
+ + E ++ L+C+ + VTW KDG++L ++ V ATG T R +
Sbjct: 898 RKLQAEAGASATLSCEVAQA----QTEVTWYKDGKKLSSSSKVCMEATGCT----RRLVV 949
Query: 132 INSKQ--MGSYSCFFREEKEQRGTFNFKVPE---LHGKNKPLISYV----GDSTVLTCKC 182
+ Q G YSC E QR +F+ V E + K++ S V G S L+C+
Sbjct: 950 QQAGQADAGEYSC---EAGGQRLSFHLDVKEPKVVFAKDQVAHSEVQAEAGASATLSCEV 1006
Query: 183 QNCFPLNWTWYSSNGSVKVPVGVQMNKYVINGTYANETKLKITQLLEEDGESYWCRALFQ 242
WY + + V + +L + Q + D Y C A Q
Sbjct: 1007 AQA-QTEVMWYKDGKKLSSSLKVHVE------AKGCRRRLVVQQAGKTDAGDYSCEARGQ 1059
Query: 243 LGESEEHI 250
HI
Sbjct: 1060 RVSFRLHI 1067
Score = 30.4 bits (67), Expect = 2.2
Identities = 35/154 (22%), Positives = 58/154 (37%), Gaps = 21/154 (13%)
Query: 72 VEKNITLERPSNVNLTCQFTTSGDLNAVNVTWKKDGEQLENNYLVSATGSTLYTQYRFTI 131
V + E + L+C+ VTW KDG++L ++ V +
Sbjct: 1172 VHNEVQAEAGTTAMLSCEVAQP----QTEVTWYKDGKKLSSSSKVRMEVKGCTRRLVVQQ 1227
Query: 132 INSKQMGSYSCFFREEKEQRGTFNFKVPE---LHGKNKPLISYV----GDSTVLTCKCQN 184
+ G YSC E QR +F + E + K + + + V G S L+C+
Sbjct: 1228 VGKADAGEYSC---EAGGQRVSFQLHITEPKAVFAKEQLVHNEVRTEAGASATLSCEVAQ 1284
Query: 185 CFPLNWTWY------SSNGSVKVPVGVQMNKYVI 212
TWY SS+ V++ M + V+
Sbjct: 1285 A-QTEVTWYKDGKKLSSSSKVRIEAAGCMRQLVV 1317
>gi|148833506 obscurin, cytoskeletal calmodulin and titin-interacting
RhoGEF isoform b [Homo sapiens]
Length = 7968
Score = 37.4 bits (85), Expect = 0.018
Identities = 60/253 (23%), Positives = 104/253 (41%), Gaps = 39/253 (15%)
Query: 49 EIMANNFSLESHNISLTEHSSMPVEKNI-TLERPSNVNLTCQFTTSGDLNA------VNV 101
+ +A +S E+ + L+ H + K + E+P++ + + TS L+ V
Sbjct: 1506 QAVAGEYSCEAGSQRLSFHLHVAEPKAVFAKEQPASREVQAEAGTSATLSCEVAQAQTEV 1565
Query: 102 TWKKDGEQLENNYLV--SATGSTLYTQYRFTIINSKQ--MGSYSCFFREEKEQRGTFNFK 157
TW KDG++L ++ V A G T R + + Q G YSC + +QR +F+
Sbjct: 1566 TWYKDGKKLSSSSKVRMEAVGCT----RRLVVQEAGQADAGEYSC---KAGDQRLSFHLH 1618
Query: 158 VPE---LHGKNKP----LISYVGDSTVLTCKCQNCFPLNWTWYSSNGSVKVPVGVQMNKY 210
V E + K +P + + G S L+C+ TWY + V++
Sbjct: 1619 VAEPKVVFAKEQPAHREVQAEAGASATLSCEVAQA-QTEVTWYKDGKKLSSSSKVRVE-- 1675
Query: 211 VINGTYANETKLKITQLLEEDGESYWC-----RALFQLGESEEHIELVVLSYLVPLKPFL 265
+L + Q + D Y C R F+L +E +E + +P +
Sbjct: 1676 ----AVGCTRRLVVQQAGQADAGEYSCEAGGQRLSFRLHVAE--LEPQISERPCRREPLV 1729
Query: 266 VIVAEVILLVATI 278
V E I+L AT+
Sbjct: 1730 VKEHEDIILTATL 1742
Score = 33.5 bits (75), Expect = 0.26
Identities = 44/204 (21%), Positives = 75/204 (36%), Gaps = 26/204 (12%)
Query: 59 SHNISLTEHSSM-----PVEKNITLERPSNVNLTCQFTTSGDLNAVNVTWKKDGEQLENN 113
S + +TE M V + E ++ L+C+ + VTW KDG++L ++
Sbjct: 1062 SFRLHITEPKMMFAKEQSVHNEVQAEAGASAMLSCEVAQA----QTEVTWYKDGKKLSSS 1117
Query: 114 YLVSATGSTLYTQYRFTIINSKQMGSYSCFFREEKEQRGTFNFKVPELHG-------KNK 166
V + G YSC E QR +F+ + E G +
Sbjct: 1118 SKVGMEVKGCTRRLVLPQAGKADAGEYSC---EAGGQRVSFHLHITEPKGVFAKEQSVHN 1174
Query: 167 PLISYVGDSTVLTCKCQNCFPLNWTWYSSNGSVKVPVGVQMNKYVINGTYANETKLKITQ 226
+ + G + +L+C+ TWY + V+M + G +L + Q
Sbjct: 1175 EVQAEAGTTAMLSCEVAQP-QTEVTWYKDGKKLSSSSKVRME---VKGC---TRRLVVQQ 1227
Query: 227 LLEEDGESYWCRALFQLGESEEHI 250
+ + D Y C A Q + HI
Sbjct: 1228 VGKADAGEYSCEAGGQRVSFQLHI 1251
Score = 32.3 bits (72), Expect = 0.59
Identities = 36/175 (20%), Positives = 61/175 (34%), Gaps = 21/175 (12%)
Query: 72 VEKNITLERPSNVNLTCQFTTSGDLNAVNVTWKKDGEQLENNYLVSATGSTLYTQYRFTI 131
V + E ++ L+C+ + VTW KDG++L ++ V + Q
Sbjct: 1264 VHNEVRTEAGASATLSCEVAQA----QTEVTWYKDGKKLSSSSKVRIEAAGCMRQLVVQQ 1319
Query: 132 INSKQMGSYSCFFREEKEQRGTFNFKVPELHG-------KNKPLISYVGDSTVLTCKCQN 184
G Y+C E QR +F+ V E ++ + + G L+C+
Sbjct: 1320 AGQADAGEYTC---EAGGQRLSFHLDVSEPKAVFAKEQLAHRKVQAEAGAIATLSCEVAQ 1376
Query: 185 CFPLNWTWYSSNGSVKVPVGVQMNKYVINGTYANETKLKITQLLEEDGESYWCRA 239
TWY + V+M +L + Q + D Y C A
Sbjct: 1377 A-QTEVTWYKDGKKLSSSSKVRME------AVGCTRRLVVQQACQADTGEYSCEA 1424
Score = 31.6 bits (70), Expect = 1.0
Identities = 46/188 (24%), Positives = 72/188 (38%), Gaps = 29/188 (15%)
Query: 74 KNITLERPSNVNLTCQFTTSGDLNAVNVTWKKDGEQLENNYLV--SATGSTLYTQYRFTI 131
+ + E ++ L+C+ + VTW KDG++L ++ V ATG T R +
Sbjct: 898 RKLQAEAGASATLSCEVAQA----QTEVTWYKDGKKLSSSSKVCMEATGCT----RRLVV 949
Query: 132 INSKQ--MGSYSCFFREEKEQRGTFNFKVPE---LHGKNKPLISYV----GDSTVLTCKC 182
+ Q G YSC E QR +F+ V E + K++ S V G S L+C+
Sbjct: 950 QQAGQADAGEYSC---EAGGQRLSFHLDVKEPKVVFAKDQVAHSEVQAEAGASATLSCEV 1006
Query: 183 QNCFPLNWTWYSSNGSVKVPVGVQMNKYVINGTYANETKLKITQLLEEDGESYWCRALFQ 242
WY + + V + +L + Q + D Y C A Q
Sbjct: 1007 AQA-QTEVMWYKDGKKLSSSLKVHVE------AKGCRRRLVVQQAGKTDAGDYSCEARGQ 1059
Query: 243 LGESEEHI 250
HI
Sbjct: 1060 RVSFRLHI 1067
Score = 30.8 bits (68), Expect = 1.7
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Query: 83 NVNLTCQFTTSGDLNAVNVTWKKDGEQLENN--YLVSATGSTLYTQYRFTIINSKQMGSY 140
+V L CQ + A TW KDG LE++ L+SAT + ++ ++ +G Y
Sbjct: 7479 SVTLACQVSAQP---AAQATWSKDGAPLESSSRVLISATLKN-FQLLTILVVVAEDLGVY 7534
Query: 141 SC 142
+C
Sbjct: 7535 TC 7536
Score = 30.4 bits (67), Expect = 2.2
Identities = 35/154 (22%), Positives = 58/154 (37%), Gaps = 21/154 (13%)
Query: 72 VEKNITLERPSNVNLTCQFTTSGDLNAVNVTWKKDGEQLENNYLVSATGSTLYTQYRFTI 131
V + E + L+C+ VTW KDG++L ++ V +
Sbjct: 1172 VHNEVQAEAGTTAMLSCEVAQP----QTEVTWYKDGKKLSSSSKVRMEVKGCTRRLVVQQ 1227
Query: 132 INSKQMGSYSCFFREEKEQRGTFNFKVPE---LHGKNKPLISYV----GDSTVLTCKCQN 184
+ G YSC E QR +F + E + K + + + V G S L+C+
Sbjct: 1228 VGKADAGEYSC---EAGGQRVSFQLHITEPKAVFAKEQLVHNEVRTEAGASATLSCEVAQ 1284
Query: 185 CFPLNWTWY------SSNGSVKVPVGVQMNKYVI 212
TWY SS+ V++ M + V+
Sbjct: 1285 A-QTEVTWYKDGKKLSSSSKVRIEAAGCMRQLVV 1317
>gi|4507875 vascular cell adhesion molecule 1 isoform a precursor
[Homo sapiens]
Length = 739
Score = 36.2 bits (82), Expect = 0.041
Identities = 45/202 (22%), Positives = 84/202 (41%), Gaps = 32/202 (15%)
Query: 66 EHSSMPVEKNITLERPSNVNLTCQFTTSGDLNAVNVTWKKDGEQLENNYLVSATGSTLYT 125
+++ + V + L+ +V +TC +S L A + W K +L+N L +G+ T
Sbjct: 224 KNTVISVNPSTKLQEGGSVTMTC---SSEGLPAPEIFWSK---KLDNGNLQHLSGNATLT 277
Query: 126 QYRFTIINSKQMGSYSCFFREEKEQRGTFNFKVPELHGKNKP----------LISYVGDS 175
+ +S G Y C E N K EL + KP + + +GDS
Sbjct: 278 LIAMRMEDS---GIYVC----EGVNLIGKNRKEVELIVQEKPFTVEISPGPRIAAQIGDS 330
Query: 176 TVLTCKCQNCFPLNWTWYSSNGSVKVPVGVQMNKYVINGTYANETKLKITQLLEEDGESY 235
+LTC C +++W + + P+ ++ N T L ++ + E+ SY
Sbjct: 331 VMLTCSVMGCESPSFSWRT---QIDSPLSGKVRSEGTNST------LTLSPVSFENEHSY 381
Query: 236 WCRALFQLGESEEHIELVVLSY 257
C + E+ I++ + S+
Sbjct: 382 LCTVTCGHKKLEKGIQVELYSF 403
>gi|166295173 kin of IRRE like [Homo sapiens]
Length = 757
Score = 36.2 bits (82), Expect = 0.041
Identities = 45/205 (21%), Positives = 76/205 (37%), Gaps = 40/205 (19%)
Query: 61 NISLTEHSSMPVEKNI---TLERPSNVNLTCQFTTSGDLNAVNVTWKKDGEQLENNYLVS 117
+I L H V +I T++ V TCQ T + ++ + W K G +E+ +
Sbjct: 214 SIELDVHHPPTVTLSIEPQTVQEGERVVFTCQATANPEI--LGYRWAKGGFLIEDAH--- 268
Query: 118 ATGSTLYTQYRFTIINSKQMGSYSCFFREEKEQRGTFNFKV-------PELHGKNKPLIS 170
++Y + S SC E + G+ N P + KP +
Sbjct: 269 ------ESRYETNVDYSFFTEPVSC---EVHNKVGSTNVSTLVNVHFAPRIVVDPKPTTT 319
Query: 171 YVGDSTVLTCKCQNCFPLNWTWYSSNGSVKVPVGVQMNKYVINGTYANETKLKITQLLEE 230
+G LTC PL TW + N +N +L + + +
Sbjct: 320 DIGSDVTLTCVWVGNPPLTLTWTKKDS---------------NMVLSNSNQLLLKSVTQA 364
Query: 231 DGESYWCRALF-QLGESEEHIELVV 254
D +Y CRA+ ++G +E + L V
Sbjct: 365 DAGTYTCRAIVPRIGVAEREVPLYV 389
>gi|126012571 heparan sulfate proteoglycan 2 [Homo sapiens]
Length = 4391
Score = 35.8 bits (81), Expect = 0.053
Identities = 53/239 (22%), Positives = 93/239 (38%), Gaps = 40/239 (16%)
Query: 28 RPSSADGSAPDSPFTSPPLREEIMANNFSLESHNISLTEHSSMPVEKNITLERPSNVNLT 87
R +S G ++ FT E +++ L S IS+ SS T+++ + +
Sbjct: 2992 RAASGPGPEQEASFTVTVPPSE--GSSYRLRSPVISIDPPSS-------TVQQGQDASFK 3042
Query: 88 CQFTTSGDLNAVNVTWKKDGEQLENNYLVSATGSTLYTQYRFTIINSK--QMGSYSCFFR 145
C +++ WK ++LE+N +S GS + TI+ ++ G+Y C
Sbjct: 3043 CLIHDGAA--PISLEWKTRNQELEDNVHISPNGSII------TIVGTRPSNHGTYRCVAS 3094
Query: 146 EE-KEQRGTFNFKVPELHG-------KNKPLISYVGDSTVLTCKC--QNCFPLNWTWYSS 195
+ N V HG P+ VG + L C + WT SS
Sbjct: 3095 NAYGVAQSVVNLSV---HGPPTVSVLPEGPVWVKVGKAVTLECVSAGEPRSSARWTRISS 3151
Query: 196 NGSVKVPVGVQMNKYVINGTYANETKLKITQLLEEDGESYWCRALFQLGESEEHIELVV 254
P ++ Y G + L+I+ D +Y C A LG +++ +E++V
Sbjct: 3152 -----TPAKLEQRTY---GLMDSHAVLQISSAKPSDAGTYVCLAQNALGTAQKQVEVIV 3202
>gi|115529482 neural cell adhesion molecule 1 isoform 2 [Homo
sapiens]
Length = 858
Score = 35.8 bits (81), Expect = 0.053
Identities = 44/203 (21%), Positives = 75/203 (36%), Gaps = 35/203 (17%)
Query: 75 NITLERPSNVNLTCQFTTSGDLNAVNVTWKKDGEQLE-----NNYLVSATGSTLYTQYRF 129
N T +V L C + ++W KDGEQ+E Y+ S S Q
Sbjct: 222 NATANLGQSVTLVCD---AEGFPEPTMSWTKDGEQIEQEEDDEKYIFSDDSS----QLTI 274
Query: 130 TIINSKQMGSYSCFFREEK-EQRGTFNFKVPELHGKNKPLISYVGDST--------VLTC 180
++ Y C + EQ T + KV KP I+YV + T LTC
Sbjct: 275 KKVDKNDEAEYICIAENKAGEQDATIHLKV-----FAKPKITYVENQTAMELEEQVTLTC 329
Query: 181 KCQNCFPLNWTWYSSNGSVKVPVGVQ---------MNKYVINGTYANETKLKITQLLEED 231
+ + TW +S ++ ++ +++ ++A + L + + D
Sbjct: 330 EASGDPIPSITWRTSTRNISSEEKASWTRPEKQETLDGHMVVRSHARVSSLTLKSIQYTD 389
Query: 232 GESYWCRALFQLGESEEHIELVV 254
Y C A +G+ + + L V
Sbjct: 390 AGEYICTASNTIGQDSQSMYLEV 412
>gi|7657361 contactin 6 [Homo sapiens]
Length = 1028
Score = 35.8 bits (81), Expect = 0.053
Identities = 53/202 (26%), Positives = 73/202 (36%), Gaps = 28/202 (13%)
Query: 85 NLTCQFTTSGDLNAVNVTWKKDGEQLENNYLVSATGSTLYTQYRFTIINSKQMGSYSCFF 144
NL + SG N TW K+GE+L + TL T++N G Y C
Sbjct: 334 NLLWECKASGKPNPW-YTWLKNGERLNPEERIQIENGTLI----ITMLNVSDSGVYQCA- 387
Query: 145 REEKEQRGTFNFKVPELHG---------KNKPLISYVGDSTVLTCKCQNCFPLNWTWYSS 195
E K Q N ++ L K K + VG V+ CK N FP
Sbjct: 388 AENKYQIIYANAELRVLASAPDFSKSPVKKKSFVQ-VGGDIVIGCK-PNAFP-------- 437
Query: 196 NGSVKVPVGVQMNKYVINGTYANETKLKITQLLEEDGESYWCRALFQLGESEEHIELVVL 255
++ G + + + LKI + D SY C A Q G ++ L+V
Sbjct: 438 RAAISWKRGTETLRQSKRIFLLEDGSLKIYNITRSDAGSYTCIATNQFGTAKNTGSLIVK 497
Query: 256 S---YLVPLKPFLVIVAEVILL 274
VP V V E I+L
Sbjct: 498 ERTVITVPPSKMDVTVGESIVL 519
>gi|21359935 Down syndrome cell adhesion molecule like 1 [Homo
sapiens]
Length = 2113
Score = 35.0 bits (79), Expect = 0.091
Identities = 34/154 (22%), Positives = 59/154 (38%), Gaps = 10/154 (6%)
Query: 92 TSGDLNAVNVTWKKDGEQLENNYLVSATGSTLYTQYRFTIINSKQMGSYSCFFREE---- 147
+SGD+ + +TW+KDG+ + + V+ + + + ++ K G+Y+C
Sbjct: 680 SSGDM-PIRITWRKDGQVIISGSGVTIESKEFMSSLQISSVSLKHNGNYTCIASNAAATV 738
Query: 148 KEQRGTFNFKVPELHGKNKPLISYVGDSTVLTCKCQNCFPLNWTWYSSNGSVKVPVGVQM 207
+R P + G + VL C P W + GS Q
Sbjct: 739 SRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPKVMWKHAKGSGNPQ---QY 795
Query: 208 NKYVING--TYANETKLKITQLLEEDGESYWCRA 239
+ + G + L I +LEED Y C+A
Sbjct: 796 HPVPLTGRIQILPNSSLLIRHVLEEDIGYYLCQA 829
>gi|9624969 butyrophilin-like 2 [Homo sapiens]
Length = 455
Score = 34.7 bits (78), Expect = 0.12
Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 17/92 (18%)
Query: 163 GKNKPLISYVGDSTVLTCKC---QNCFPLNWTWYSSNGSVKVPVG--------VQMNKY- 210
G P+++ VG+ +LTC+ + + WY S S V V +QM +Y
Sbjct: 33 GPAHPILAGVGEDALLTCQLLPKRTTMHVEVRWYRSEPSTPVFVHRDGVEVTEMQMEEYR 92
Query: 211 -----VINGTYANETKLKITQLLEEDGESYWC 237
+ NG LKI + D YWC
Sbjct: 93 GWVEWIENGIAKGNVALKIHNIQPSDNGQYWC 124
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.131 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,754,073
Number of Sequences: 37866
Number of extensions: 580251
Number of successful extensions: 2427
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 67
Number of HSP's that attempted gapping in prelim test: 2133
Number of HSP's gapped (non-prelim): 330
length of query: 327
length of database: 18,247,518
effective HSP length: 103
effective length of query: 224
effective length of database: 14,347,320
effective search space: 3213799680
effective search space used: 3213799680
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.