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Search of human proteins with 38348206
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|38348206 Ras and Rab interactor-like [Homo sapiens]
(452 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|38348206 Ras and Rab interactor-like [Homo sapiens] 929 0.0
gi|40353729 Ras and Rab interactor 3 [Homo sapiens] 130 2e-30
gi|18466802 Ras and Rab interactor 2 [Homo sapiens] 108 8e-24
gi|68989256 ras inhibitor RIN1 [Homo sapiens] 87 3e-17
gi|4502805 chromogranin A precursor [Homo sapiens] 44 2e-04
gi|239755193 PREDICTED: hypothetical protein [Homo sapiens] 39 0.013
gi|239749690 PREDICTED: hypothetical protein XP_002347120 [Homo ... 39 0.013
gi|239743958 PREDICTED: hypothetical protein XP_002344281 [Homo ... 39 0.013
gi|239756047 PREDICTED: heparan sulfate 6-O-sulfotransferase 3 [... 38 0.016
gi|45580707 heparan sulfate 6-O-sulfotransferase 3 [Homo sapiens] 38 0.016
gi|110556644 zinc finger protein, multitype 1 [Homo sapiens] 37 0.037
gi|154759293 cysteine-rich hydrophobic domain 1 [Homo sapiens] 37 0.037
gi|56549129 transmembrane anchor protein 1 isoform 3 [Homo sapiens] 37 0.048
gi|56549133 transmembrane anchor protein 1 isoform 2 [Homo sapiens] 37 0.048
gi|56549131 transmembrane anchor protein 1 isoform 1 [Homo sapiens] 37 0.048
gi|239753369 PREDICTED: hypothetical protein LOC375295 [Homo sap... 36 0.063
gi|239747936 PREDICTED: hypothetical protein LOC375295 [Homo sap... 36 0.063
gi|239741831 PREDICTED: hypothetical protein [Homo sapiens] 36 0.063
gi|7662260 kelch repeat and BTB (POZ) domain containing 11 [Homo... 36 0.063
gi|45439367 gap junction protein, gamma 2, 47kDa [Homo sapiens] 36 0.082
gi|14249386 zinc finger protein 496 [Homo sapiens] 35 0.11
gi|148747864 JAW1-related protein isoform a [Homo sapiens] 35 0.14
gi|154091334 JAW1-related protein isoform c [Homo sapiens] 35 0.14
gi|154091332 JAW1-related protein isoform b [Homo sapiens] 35 0.14
gi|148728182 JAW1-related protein isoform b [Homo sapiens] 35 0.14
gi|4503257 death-domain associated protein isoform a [Homo sapiens] 35 0.18
gi|215422388 death-domain associated protein isoform a [Homo sap... 35 0.18
gi|215422366 death-domain associated protein isoform b [Homo sap... 35 0.18
gi|56790299 pleckstrin and Sec7 domain containing [Homo sapiens] 35 0.18
gi|27734961 hypothetical protein LOC160298 [Homo sapiens] 35 0.18
>gi|38348206 Ras and Rab interactor-like [Homo sapiens]
Length = 452
Score = 929 bits (2401), Expect = 0.0
Identities = 452/452 (100%), Positives = 452/452 (100%)
Query: 1 MPDLPHLLAFLSASRDVLPRTLLLPPPTLGPRDEHTDPVQIGRVQQDTPGKVLSIVNQLY 60
MPDLPHLLAFLSASRDVLPRTLLLPPPTLGPRDEHTDPVQIGRVQQDTPGKVLSIVNQLY
Sbjct: 1 MPDLPHLLAFLSASRDVLPRTLLLPPPTLGPRDEHTDPVQIGRVQQDTPGKVLSIVNQLY 60
Query: 61 LETHRGWGREQTPQETEPEAAQRHDPAPRNPAPHGVSWVKGPLSPEVDHPGPALASLLEE 120
LETHRGWGREQTPQETEPEAAQRHDPAPRNPAPHGVSWVKGPLSPEVDHPGPALASLLEE
Sbjct: 61 LETHRGWGREQTPQETEPEAAQRHDPAPRNPAPHGVSWVKGPLSPEVDHPGPALASLLEE 120
Query: 121 EEEDLEGKEEGREDDPEEEGPEDVLTIHVQSLVRARSSYVARQYRSLRVRIASDSGGPHG 180
EEEDLEGKEEGREDDPEEEGPEDVLTIHVQSLVRARSSYVARQYRSLRVRIASDSGGPHG
Sbjct: 121 EEEDLEGKEEGREDDPEEEGPEDVLTIHVQSLVRARSSYVARQYRSLRVRIASDSGGPHG 180
Query: 181 SGDPATELLQDVRHLLTDLQDHLAKDSYIRAVFGSRGPGLPKKDEDPGPALETAVCQAVL 240
SGDPATELLQDVRHLLTDLQDHLAKDSYIRAVFGSRGPGLPKKDEDPGPALETAVCQAVL
Sbjct: 181 SGDPATELLQDVRHLLTDLQDHLAKDSYIRAVFGSRGPGLPKKDEDPGPALETAVCQAVL 240
Query: 241 APLKPALWTRLRTLRAPELRRLRRRQTALRAGAGPPGAQGPGPEGQSPAPALRSRIHERL 300
APLKPALWTRLRTLRAPELRRLRRRQTALRAGAGPPGAQGPGPEGQSPAPALRSRIHERL
Sbjct: 241 APLKPALWTRLRTLRAPELRRLRRRQTALRAGAGPPGAQGPGPEGQSPAPALRSRIHERL 300
Query: 301 AHLHAACAPRRKVALLLEVCRDVYAGLARGENQDPLGADAFLPALTEELIWSPDIGDTQL 360
AHLHAACAPRRKVALLLEVCRDVYAGLARGENQDPLGADAFLPALTEELIWSPDIGDTQL
Sbjct: 301 AHLHAACAPRRKVALLLEVCRDVYAGLARGENQDPLGADAFLPALTEELIWSPDIGDTQL 360
Query: 361 DVEFLMELLDPDELRGEAGYYLTTWFGALHHIAHYQPETDRAPRGLSSEARASLHQWHRR 420
DVEFLMELLDPDELRGEAGYYLTTWFGALHHIAHYQPETDRAPRGLSSEARASLHQWHRR
Sbjct: 361 DVEFLMELLDPDELRGEAGYYLTTWFGALHHIAHYQPETDRAPRGLSSEARASLHQWHRR 420
Query: 421 RTLHRKDHPRAQANLPFKEPWAEETVTGTSDN 452
RTLHRKDHPRAQANLPFKEPWAEETVTGTSDN
Sbjct: 421 RTLHRKDHPRAQANLPFKEPWAEETVTGTSDN 452
>gi|40353729 Ras and Rab interactor 3 [Homo sapiens]
Length = 985
Score = 130 bits (328), Expect = 2e-30
Identities = 82/243 (33%), Positives = 137/243 (56%), Gaps = 13/243 (5%)
Query: 185 ATELLQDVRHLLTDLQDHLAKDSYIRAVFGSRGPGLPKKDEDPGPALETAVCQAVLAPLK 244
+TE+LQ++R ++T L+ +L + + ++A+ P L +E+ +E+A+ + VL PLK
Sbjct: 637 STEMLQEIRTMMTQLKSYLLQSTELKALVD---PAL-HSEEELEAIVESALYKCVLKPLK 692
Query: 245 PALWTRLRTLRAPE--LRRLRRRQTALRAGAGPPGAQGPGPEGQSPAPALRSRIHERLAH 302
A+ + L + + + L++L+ Q + A G P + +I ++
Sbjct: 693 EAINSCLHQIHSKDGSLQQLKENQLVILATT----TTDLGVTTSVPEVPMMEKILQKFTS 748
Query: 303 LHAACAPRRKVALLLEVCRDVYAGLARGENQDPLGADAFLPALTEELIWSPDIGDTQLDV 362
+H A +P +K+++LL+ C+ +Y +A G P GAD FLP L L S ++ + L+V
Sbjct: 749 MHKAYSPEKKISILLKTCKLIYDSMALGNPGKPYGADDFLPVLMYVLARS-NLTEMLLNV 807
Query: 363 EFLMELLDPDELRGEAGYYLTTWFGALHHIAHYQPETDRAPRGLSSEARASLHQWHRRRT 422
E++MEL+DP GE YYLTT +GAL HI Y T R LS E + S+H+W RRRT
Sbjct: 808 EYMMELMDPALQLGEGSYYLTTTYGALEHIKSYDKIT--VTRQLSVEVQDSIHRWERRRT 865
Query: 423 LHR 425
L++
Sbjct: 866 LNK 868
Score = 28.9 bits (63), Expect = 10.0
Identities = 52/216 (24%), Positives = 75/216 (34%), Gaps = 37/216 (17%)
Query: 101 GPLSPEVDHPGPALASLLEEEEEDLEGKEEGREDDPEEEGPEDVLTIHVQSLVRARSSYV 160
GPL E PG A + L + L K+ P E V + +S +
Sbjct: 352 GPLREEAMKPGAASSPLQQVPAPPLPAKKNLPTAPPRRRVSERVS-------LEDQSPGM 404
Query: 161 ARQYRSLRVRIASDSGGPHGSGDPATELLQDVRHLLTDLQDHLAKDSYIRAVFGSRGPGL 220
A + L + S GP + +TE QD ++A P L
Sbjct: 405 AAEGDQLSLPPQGTSDGPEDTPRESTEQGQDTE---------------VKASDPHSMPEL 449
Query: 221 PKKDEDPGPALETAVCQAVLAPLKPALWTRLR-TLRAPELRRLRRRQTALRAGAGPPGAQ 279
P+ + P V P K + +L TL AP L + +A A
Sbjct: 450 PRTAKQP----------PVPPPRKKRISRQLASTLPAP----LENAELCTQAMALETPTP 495
Query: 280 GPGPEGQSPAPALRSRIHERLAHLHAACAPRRKVAL 315
GP EGQSPA ++ A H+ +P K +L
Sbjct: 496 GPPREGQSPASQAGTQHPPAQATAHSQSSPEFKGSL 531
>gi|18466802 Ras and Rab interactor 2 [Homo sapiens]
Length = 895
Score = 108 bits (271), Expect = 8e-24
Identities = 78/243 (32%), Positives = 127/243 (52%), Gaps = 15/243 (6%)
Query: 185 ATELLQDVRHLLTDLQDHLAKDSYIRAVFGSRGPGLPKKDEDPGPALETAVCQAVLAPLK 244
+T++LQ +R +T ++++L++ S + S P ++ LE A+ + +L PLK
Sbjct: 550 STDMLQTIRQFMTQVKNYLSQSSELDPPIESLIP-----EDQIDVVLEKAMHKCILKPLK 604
Query: 245 PALWTRLRTLRAPE--LRRLRRRQTALRAGAGPPGAQGPGPEGQSPAPALRSRIHERLAH 302
+ L+ + ++L+ +R Q G +P +I +
Sbjct: 605 GHVEAMLKDFHMADGSWKQLKENLQLVRQR----NPQELGVFAPTPDFVDVEKIKVKFMT 660
Query: 303 LHAACAPRRKVALLLEVCRDVYAGLARGENQDPLGADAFLPALTEELIWSPDIGDTQLDV 362
+ +P +KV LLL VC+ +Y + + GAD FLP LT +I D+ + ++
Sbjct: 661 MQKMYSPEKKVMLLLRVCKLIYTVMENNSGR-MYGADDFLPVLTY-VIAQCDMLELDTEI 718
Query: 363 EFLMELLDPDELRGEAGYYLTTWFGALHHIAHYQPETDRAPRGLSSEARASLHQWHRRRT 422
E++MELLDP L GE GYYLT+ +GAL I ++Q E +A R LSSE R +L QWH+RRT
Sbjct: 719 EYMMELLDPSLLHGEGGYYLTSAYGALSLIKNFQEE--QAARLLSSETRDTLRQWHKRRT 776
Query: 423 LHR 425
+R
Sbjct: 777 TNR 779
Score = 29.3 bits (64), Expect = 7.7
Identities = 15/23 (65%), Positives = 16/23 (69%)
Query: 3 DLPHLLAFLSASRDVLPRTLLLP 25
DL L+AF SRDVLP TL LP
Sbjct: 167 DLFRLIAFYCISRDVLPFTLKLP 189
>gi|68989256 ras inhibitor RIN1 [Homo sapiens]
Length = 783
Score = 87.0 bits (214), Expect = 3e-17
Identities = 100/342 (29%), Positives = 147/342 (42%), Gaps = 29/342 (8%)
Query: 89 RNPAPHGVSWVKGPLSPEVDHPGPALASLLEEEEEDLEGKEEGREDDPEEEGPEDVLTIH 148
R PA G S P EVD P+ EEE + G P +L
Sbjct: 296 RVPAGSGPSLPPMPSLQEVDCGSPS-----SSEEEGVPGSRGSPATSPHLGRRRPLL--- 347
Query: 149 VQSLVRARSSYVARQYRSLRVRIASDSGGPHGSGDPATELLQDVR-----HLLTDLQDHL 203
+S+ A S +A + + R A +G +LL VR L ++ L
Sbjct: 348 -RSMSAAFCSLLAPERQVGRAAAALMQDRHTAAGQLVQDLLTQVRAGPEPQELQGIRQAL 406
Query: 204 AKD-SYIRAVFGSRGPGLPKKDEDPGPALETAVCQAVLAPLKPALWTRLRTLRAPELRRL 262
++ + + A G PK+ E LE ++ +VL PL+P L RLR A + L
Sbjct: 407 SRARAMLSAELGPEKLLSPKRLEH---VLEKSLHCSVLKPLRPILAARLRRRLAAD-GSL 462
Query: 263 RRRQTALRAGAGPPGAQGPGPEGQS---PAPALRSRIHERLAHLHAACAPRRKVALLLEV 319
R LR AQGPG G P+P ++ ++L L +P +V LL+
Sbjct: 463 GRLAEGLRLAR----AQGPGAFGSHLSLPSPVELEQVRQKLLQLLRTYSPSAQVKRLLQA 518
Query: 320 CRDVYAGLARGENQDPLGADAFLPALTEELIWSPDIGDTQLDVEFLMELLDPDELRGEAG 379
C+ +Y L R + + GAD FLP L+ L D+ + L+ E++ ELL+P L GE G
Sbjct: 519 CKLLYMAL-RTQEGEGAGADEFLPLLSLVLAHC-DLPELLLEAEYMSELLEPSLLTGEGG 576
Query: 380 YYLTTWFGALHHIAHYQPETDRAPRGLSSEARASLHQWHRRR 421
YYLT+ +L ++ + P E R SL W +RR
Sbjct: 577 YYLTSLSASLALLSGL-GQAHTLPLSPVQELRRSLSLWEQRR 617
>gi|4502805 chromogranin A precursor [Homo sapiens]
Length = 457
Score = 44.3 bits (103), Expect = 2e-04
Identities = 43/144 (29%), Positives = 57/144 (39%), Gaps = 24/144 (16%)
Query: 61 LETHRGWGREQTP---QETEPEAAQRHDPAP----RNPAPHGVSWVKGPLSPEVDHPG-- 111
++ + G Q P +E E EA H PA + P P +G VD
Sbjct: 158 MQESKAEGNNQAPGEEEEEEEEATNTHPPASLPSQKYPGPQAEGDSEGLSQGLVDREKGL 217
Query: 112 ---PALASLLEEEEEDLEGKEEGREDDPEEEGPEDVLTIHVQSLVRARSSYVARQYRSLR 168
P + EEEEE+ E E G E PEEEGP VL H + Y+ +R
Sbjct: 218 SAEPGWQAKREEEEEEEEEAEAGEEAVPEEEGPTVVLNPH-----------PSLGYKEIR 266
Query: 169 V-RIASDSGGPHGSGDPATELLQD 191
S++ G+G P E QD
Sbjct: 267 KGESRSEALAVDGAGKPGAEEAQD 290
Score = 34.3 bits (77), Expect = 0.24
Identities = 51/209 (24%), Positives = 77/209 (36%), Gaps = 21/209 (10%)
Query: 26 PPTLGPRDEHTDPVQIGRVQQDTPGKVLSIVN-QLYLETHRGWGREQTPQETEPEAAQRH 84
PP P ++ P + + D+ G +V+ + L GW ++ +E E E A+
Sbjct: 185 PPASLPSQKYPGP----QAEGDSEGLSQGLVDREKGLSAEPGWQAKREEEEEEEEEAEAG 240
Query: 85 DPA-PRNPAPHGVSWVKGPLSPEVDHPGPALASLLE---------EEEEDLEGKEEGRED 134
+ A P P V L + G + + L EE +D EGK E
Sbjct: 241 EEAVPEEEGPTVVLNPHPSLGYKEIRKGESRSEALAVDGAGKPGAEEAQDPEGKGEQEHS 300
Query: 135 DPEEEGPEDVLTIHVQSLVRARSSYVARQYRSLRVRIASDSGGPHGSGDPATELLQDVR- 193
+EE E+ + + Q L R S Q + DS A EL + R
Sbjct: 301 QQKEE--EEEMAVVPQGLFRGGKSGELEQEEERLSKEWEDSKRWSKMDQLAKELTAEKRL 358
Query: 194 ---HLLTDLQDHLAKDSYIRAVFGSRGPG 219
D +D K S+ +G RGPG
Sbjct: 359 EGQEEEEDNRDSSMKLSFRARAYGFRGPG 387
>gi|239755193 PREDICTED: hypothetical protein [Homo sapiens]
Length = 268
Score = 38.5 bits (88), Expect = 0.013
Identities = 46/168 (27%), Positives = 76/168 (45%), Gaps = 23/168 (13%)
Query: 185 ATELLQDVRHLLTDLQDHLAKDS---YIRAVFGSRGPGLPKKDEDPGPALETAVCQAVLA 241
A EL+ ++ L+T+LQ+ + + ++ + P LP+K P P V QA L
Sbjct: 89 ALELVLELA-LVTELQEEKSSTTCQPFLCLSKDTEQPRLPEKPLSPNPQ---NVYQATLL 144
Query: 242 PLKPALWTRLR-TLRAPELRRLRRRQTALRAGAGPPG-------AQGPGPEGQSPAPALR 293
P+ PA LR L + +L + + A PP +G G P LR
Sbjct: 145 PVVPAFLLTLRLCLNGFRVLQLGQEKVGTALQAKPPDPSPLAGTTRGVGARVLPSQPRLR 204
Query: 294 SRIHERLAHLHAACAPRRKVALLLEVCRDVYAGLARGENQDPLGADAF 341
+ H L+H C+P ++ LL+ + + A+G Q+ LGA++F
Sbjct: 205 PQPHV-LSH----CSPPDRIRNLLDKWENCF---AQGHIQERLGAESF 244
>gi|239749690 PREDICTED: hypothetical protein XP_002347120 [Homo
sapiens]
Length = 268
Score = 38.5 bits (88), Expect = 0.013
Identities = 46/168 (27%), Positives = 76/168 (45%), Gaps = 23/168 (13%)
Query: 185 ATELLQDVRHLLTDLQDHLAKDS---YIRAVFGSRGPGLPKKDEDPGPALETAVCQAVLA 241
A EL+ ++ L+T+LQ+ + + ++ + P LP+K P P V QA L
Sbjct: 89 ALELVLELA-LVTELQEEKSSTTCQPFLCLSKDTEQPRLPEKPLSPNPQ---NVYQATLL 144
Query: 242 PLKPALWTRLR-TLRAPELRRLRRRQTALRAGAGPPG-------AQGPGPEGQSPAPALR 293
P+ PA LR L + +L + + A PP +G G P LR
Sbjct: 145 PVVPAFLLTLRLCLNGFRVLQLGQEKVGTALQAKPPDPSPLAGTTRGVGARVLPSQPRLR 204
Query: 294 SRIHERLAHLHAACAPRRKVALLLEVCRDVYAGLARGENQDPLGADAF 341
+ H L+H C+P ++ LL+ + + A+G Q+ LGA++F
Sbjct: 205 PQPHV-LSH----CSPPDRIRNLLDKWENCF---AQGHIQERLGAESF 244
>gi|239743958 PREDICTED: hypothetical protein XP_002344281 [Homo
sapiens]
Length = 268
Score = 38.5 bits (88), Expect = 0.013
Identities = 46/168 (27%), Positives = 76/168 (45%), Gaps = 23/168 (13%)
Query: 185 ATELLQDVRHLLTDLQDHLAKDS---YIRAVFGSRGPGLPKKDEDPGPALETAVCQAVLA 241
A EL+ ++ L+T+LQ+ + + ++ + P LP+K P P V QA L
Sbjct: 89 ALELVLELA-LVTELQEEKSSTTCQPFLCLSKDTEQPRLPEKPLSPNPQ---NVYQATLL 144
Query: 242 PLKPALWTRLR-TLRAPELRRLRRRQTALRAGAGPPG-------AQGPGPEGQSPAPALR 293
P+ PA LR L + +L + + A PP +G G P LR
Sbjct: 145 PVVPAFLLTLRLCLNGFRVLQLGQEKVGTALQAKPPDPSPLAGTTRGVGARVLPSQPRLR 204
Query: 294 SRIHERLAHLHAACAPRRKVALLLEVCRDVYAGLARGENQDPLGADAF 341
+ H L+H C+P ++ LL+ + + A+G Q+ LGA++F
Sbjct: 205 PQPHV-LSH----CSPPDRIRNLLDKWENCF---AQGHIQERLGAESF 244
>gi|239756047 PREDICTED: heparan sulfate 6-O-sulfotransferase 3
[Homo sapiens]
Length = 471
Score = 38.1 bits (87), Expect = 0.016
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 11/78 (14%)
Query: 77 EPEAAQRHDPAPRNPAPHGVS----WVKGP-LSPEVDHP--GPALASLLEEEEED----L 125
+P A + PA PA + W + P L P P GP A+ EEE+E+
Sbjct: 40 QPRAGEAGPPAVPGPARRAQAPPEEWERRPQLPPPPRGPPEGPRGAAAPEEEDEEPGDPR 99
Query: 126 EGKEEGREDDPEEEGPED 143
EG+EE ED+P+ E PE+
Sbjct: 100 EGEEEEEEDEPDPEAPEN 117
>gi|45580707 heparan sulfate 6-O-sulfotransferase 3 [Homo sapiens]
Length = 471
Score = 38.1 bits (87), Expect = 0.016
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 11/78 (14%)
Query: 77 EPEAAQRHDPAPRNPAPHGVS----WVKGP-LSPEVDHP--GPALASLLEEEEED----L 125
+P A + PA PA + W + P L P P GP A+ EEE+E+
Sbjct: 40 QPRAGEAGPPAVPGPARRAQAPPEEWERRPQLPPPPRGPPEGPRGAAAPEEEDEEPGDPR 99
Query: 126 EGKEEGREDDPEEEGPED 143
EG+EE ED+P+ E PE+
Sbjct: 100 EGEEEEEEDEPDPEAPEN 117
>gi|110556644 zinc finger protein, multitype 1 [Homo sapiens]
Length = 1006
Score = 37.0 bits (84), Expect = 0.037
Identities = 20/41 (48%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 270 RAGAGPPGAQGPG-PEGQSPAPALRSRIHERLAHLHAACAP 309
R A PPG GP P SPA +R+R +L LHAA AP
Sbjct: 715 RRPAAPPGPPGPAAPPAPSPAAPVRTRRRRKLYELHAAGAP 755
>gi|154759293 cysteine-rich hydrophobic domain 1 [Homo sapiens]
Length = 224
Score = 37.0 bits (84), Expect = 0.037
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 10/79 (12%)
Query: 76 TEPEAAQRHDPAPRNPAPHGVSWVKGPLSPEVDHPGPALASLLEEEEEDLEGKEEGREDD 135
+E E + + A + +P S V GP E D EEEEE+ E +EE E++
Sbjct: 15 SELEEEEEEEAATSSSSPSSSSSVSGPDDDEED----------EEEEEEEEEEEEEEEEE 64
Query: 136 PEEEGPEDVLTIHVQSLVR 154
EEE P + + L R
Sbjct: 65 EEEEAPPPPRVVSEEHLRR 83
>gi|56549129 transmembrane anchor protein 1 isoform 3 [Homo sapiens]
Length = 170
Score = 36.6 bits (83), Expect = 0.048
Identities = 28/95 (29%), Positives = 38/95 (40%), Gaps = 22/95 (23%)
Query: 71 QTPQETEPEAAQRHDPAPRNP-APHGVSWVKGPLSP----------------EVDHPGPA 113
+ P E P A PAP P AP + GP P E + PG
Sbjct: 39 RAPPEPAPPAEATGAPAPSRPCAPEPAASPAGPEEPGEPAGLGELGEPAGPGEPEGPGDP 98
Query: 114 LASLLEEEEEDLEGKEEGRED-----DPEEEGPED 143
A+ E EE+ +E ++E +D P EGPE+
Sbjct: 99 AAAPAEAEEQAVEARQEEEQDLDGEKGPSSEGPEE 133
>gi|56549133 transmembrane anchor protein 1 isoform 2 [Homo sapiens]
Length = 177
Score = 36.6 bits (83), Expect = 0.048
Identities = 28/95 (29%), Positives = 38/95 (40%), Gaps = 22/95 (23%)
Query: 71 QTPQETEPEAAQRHDPAPRNP-APHGVSWVKGPLSP----------------EVDHPGPA 113
+ P E P A PAP P AP + GP P E + PG
Sbjct: 39 RAPPEPAPPAEATGAPAPSRPCAPEPAASPAGPEEPGEPAGLGELGEPAGPGEPEGPGDP 98
Query: 114 LASLLEEEEEDLEGKEEGRED-----DPEEEGPED 143
A+ E EE+ +E ++E +D P EGPE+
Sbjct: 99 AAAPAEAEEQAVEARQEEEQDLDGEKGPSSEGPEE 133
>gi|56549131 transmembrane anchor protein 1 isoform 1 [Homo sapiens]
Length = 204
Score = 36.6 bits (83), Expect = 0.048
Identities = 28/95 (29%), Positives = 38/95 (40%), Gaps = 22/95 (23%)
Query: 71 QTPQETEPEAAQRHDPAPRNP-APHGVSWVKGPLSP----------------EVDHPGPA 113
+ P E P A PAP P AP + GP P E + PG
Sbjct: 39 RAPPEPAPPAEATGAPAPSRPCAPEPAASPAGPEEPGEPAGLGELGEPAGPGEPEGPGDP 98
Query: 114 LASLLEEEEEDLEGKEEGRED-----DPEEEGPED 143
A+ E EE+ +E ++E +D P EGPE+
Sbjct: 99 AAAPAEAEEQAVEARQEEEQDLDGEKGPSSEGPEE 133
>gi|239753369 PREDICTED: hypothetical protein LOC375295 [Homo
sapiens]
Length = 262
Score = 36.2 bits (82), Expect = 0.063
Identities = 29/87 (33%), Positives = 34/87 (39%), Gaps = 18/87 (20%)
Query: 218 PGLPKKDEDPGPALETAVCQAVLAPLKPALWTRLRTLRAPELRRLRRRQTALRAGAGPPG 277
P P+ PGP PL PAL L L P + R+ RAG G P
Sbjct: 116 PSPPRSSAHPGPR----------GPLFPAL---LAALARPHGAEVPGRRARARAGTGFPF 162
Query: 278 AQGPGPEGQSPAPALRSRIHERLAHLH 304
GP P ++ PA H R AH H
Sbjct: 163 FPGPDPRPRTRPPA-----HARGAHAH 184
>gi|239747936 PREDICTED: hypothetical protein LOC375295 [Homo
sapiens]
Length = 262
Score = 36.2 bits (82), Expect = 0.063
Identities = 29/87 (33%), Positives = 34/87 (39%), Gaps = 18/87 (20%)
Query: 218 PGLPKKDEDPGPALETAVCQAVLAPLKPALWTRLRTLRAPELRRLRRRQTALRAGAGPPG 277
P P+ PGP PL PAL L L P + R+ RAG G P
Sbjct: 116 PSPPRSSAHPGPR----------GPLFPAL---LAALARPHGAEVPGRRARARAGTGFPF 162
Query: 278 AQGPGPEGQSPAPALRSRIHERLAHLH 304
GP P ++ PA H R AH H
Sbjct: 163 FPGPDPRPRTRPPA-----HARGAHAH 184
>gi|239741831 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 36.2 bits (82), Expect = 0.063
Identities = 29/87 (33%), Positives = 34/87 (39%), Gaps = 18/87 (20%)
Query: 218 PGLPKKDEDPGPALETAVCQAVLAPLKPALWTRLRTLRAPELRRLRRRQTALRAGAGPPG 277
P P+ PGP PL PAL L L P + R+ RAG G P
Sbjct: 116 PSPPRSSAHPGPR----------GPLFPAL---LAALARPHGAEVPGRRARARAGTGFPF 162
Query: 278 AQGPGPEGQSPAPALRSRIHERLAHLH 304
GP P ++ PA H R AH H
Sbjct: 163 FPGPDPRPRTRPPA-----HARGAHAH 184
>gi|7662260 kelch repeat and BTB (POZ) domain containing 11 [Homo
sapiens]
Length = 623
Score = 36.2 bits (82), Expect = 0.063
Identities = 69/280 (24%), Positives = 97/280 (34%), Gaps = 54/280 (19%)
Query: 72 TPQETEPEAAQRHDPAPRNPAPHGVSWVKGPLSP-EVDHPGPALASL-LEEEEEDLEGKE 129
+P+E + P P+P W++ P SP E P P E DL +
Sbjct: 87 SPEELASPEERACPEEPAAPSPEPRVWLEDPASPEEPGEPAPVPPGFGAVYGEPDLVLEV 146
Query: 130 EGREDDPEEEGPEDVLTIHVQSLVRARSSYVARQYRSLRVRIASDSGGPHGSGDPATELL 189
GR L H ++++ ARS Y R R + D G A LL
Sbjct: 147 SGRR-----------LRAH-KAVLAARSDY-------FRARASRDVLRVQGVSLTALRLL 187
Query: 190 QDVRHLLTDLQDHLAKDSYIRAVFGSRG---PGLPKKDEDP-GPALETAVCQAVLAPLKP 245
+ + + D+ V G+R PG ++ D GP L A C VL+ K
Sbjct: 188 --LADAYSGRMAGVRPDNVAEVVAGARRLQLPGAAQRATDAVGPQLSLANCYEVLSAAKR 245
Query: 246 ALWTRLR-------------TLRAPEL--------------RRLRRRQTALRAGAGPPGA 278
LR LR P + RRLR + L A A P
Sbjct: 246 QRLNELRDAAYCFMSDHYLEVLREPAVFGRLSGAERDLLLRRRLRAGRAHLLAAALGPAG 305
Query: 279 QGPGPEGQSPAPALRSRIHERLAHLHAACAPRRKVALLLE 318
+ G QSP+ +R + HAA R++ L E
Sbjct: 306 ERAGSRPQSPSGDADARGDAAVYCFHAAAGEWRELTRLPE 345
>gi|45439367 gap junction protein, gamma 2, 47kDa [Homo sapiens]
Length = 439
Score = 35.8 bits (81), Expect = 0.082
Identities = 28/78 (35%), Positives = 34/78 (43%), Gaps = 11/78 (14%)
Query: 75 ETEPEAAQRHDPAPRN------PAPHGVSWVKGPLSPEVDHPGPALASLLEEEEEDLEGK 128
E E A R P PR P PH W P ++ P L L EEEEE+ G
Sbjct: 107 EQERRRALRRRPGPRRAPRAHLPPPHA-GW---PEPADLGEEEPMLG-LGEEEEEEETGA 161
Query: 129 EEGREDDPEEEGPEDVLT 146
EG ++ EE G E+ T
Sbjct: 162 AEGAGEEAEEAGAEEACT 179
>gi|14249386 zinc finger protein 496 [Homo sapiens]
Length = 587
Score = 35.4 bits (80), Expect = 0.11
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 23/90 (25%)
Query: 231 LETAVCQAVLAPLKPALWTRLRTLRAPELRRLRRRQTALRAGAGPPGAQGPGPEGQSPAP 290
+ TA+C VLAP + + E R++R PPG + P P+G+ P+P
Sbjct: 1 MPTALCPRVLAPKE-----------SEEPRKMR----------SPPG-ENPSPQGELPSP 38
Query: 291 ALRSRIHERLAHLHAACAPRRKVALLLEVC 320
R+ R + AA PR + L ++C
Sbjct: 39 ESSRRLFRRFRYQEAA-GPREALQRLWDLC 67
>gi|148747864 JAW1-related protein isoform a [Homo sapiens]
Length = 903
Score = 35.0 bits (79), Expect = 0.14
Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 19/112 (16%)
Query: 68 GREQTPQETEPEAAQRHDPAP---RNPAPHGVSWVKGPLSPEVDHPGPALASL-----LE 119
GR + PEA + + P R P G+SW GP + PGP L + L
Sbjct: 353 GRGPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGP-----EEPGPRLQKVLAKLPLA 407
Query: 120 EEEEDLEGKEEGREDDPEEEGPED----VLTIHVQSLVRARSSYVARQYRSL 167
EEE+ GK G+ + G +D V + +Q L + R ++ + ++L
Sbjct: 408 EEEKRFAGKAGGKL--AKAPGLKDFQIQVQPVRMQKLTKLREEHILMRNQNL 457
Score = 31.6 bits (70), Expect = 1.5
Identities = 15/34 (44%), Positives = 18/34 (52%)
Query: 262 LRRRQTALRAGAGPPGAQGPGPEGQSPAPALRSR 295
L R T AG GPP +QG GP G+ P S+
Sbjct: 335 LPRSPTQDAAGVGPPASQGRGPAGEPMGPEAGSK 368
>gi|154091334 JAW1-related protein isoform c [Homo sapiens]
Length = 597
Score = 35.0 bits (79), Expect = 0.14
Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 19/112 (16%)
Query: 68 GREQTPQETEPEAAQRHDPAP---RNPAPHGVSWVKGPLSPEVDHPGPALASL-----LE 119
GR + PEA + + P R P G+SW GP + PGP L + L
Sbjct: 47 GRGPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGP-----EEPGPRLQKVLAKLPLA 101
Query: 120 EEEEDLEGKEEGREDDPEEEGPED----VLTIHVQSLVRARSSYVARQYRSL 167
EEE+ GK G+ + G +D V + +Q L + R ++ + ++L
Sbjct: 102 EEEKRFAGKAGGKL--AKAPGLKDFQIQVQPVRMQKLTKLREEHILMRNQNL 151
Score = 31.6 bits (70), Expect = 1.5
Identities = 15/34 (44%), Positives = 18/34 (52%)
Query: 262 LRRRQTALRAGAGPPGAQGPGPEGQSPAPALRSR 295
L R T AG GPP +QG GP G+ P S+
Sbjct: 29 LPRSPTQDAAGVGPPASQGRGPAGEPMGPEAGSK 62
>gi|154091332 JAW1-related protein isoform b [Homo sapiens]
Length = 821
Score = 35.0 bits (79), Expect = 0.14
Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 19/112 (16%)
Query: 68 GREQTPQETEPEAAQRHDPAP---RNPAPHGVSWVKGPLSPEVDHPGPALASL-----LE 119
GR + PEA + + P R P G+SW GP + PGP L + L
Sbjct: 271 GRGPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGP-----EEPGPRLQKVLAKLPLA 325
Query: 120 EEEEDLEGKEEGREDDPEEEGPED----VLTIHVQSLVRARSSYVARQYRSL 167
EEE+ GK G+ + G +D V + +Q L + R ++ + ++L
Sbjct: 326 EEEKRFAGKAGGKL--AKAPGLKDFQIQVQPVRMQKLTKLREEHILMRNQNL 375
Score = 31.6 bits (70), Expect = 1.5
Identities = 15/34 (44%), Positives = 18/34 (52%)
Query: 262 LRRRQTALRAGAGPPGAQGPGPEGQSPAPALRSR 295
L R T AG GPP +QG GP G+ P S+
Sbjct: 253 LPRSPTQDAAGVGPPASQGRGPAGEPMGPEAGSK 286
>gi|148728182 JAW1-related protein isoform b [Homo sapiens]
Length = 821
Score = 35.0 bits (79), Expect = 0.14
Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 19/112 (16%)
Query: 68 GREQTPQETEPEAAQRHDPAP---RNPAPHGVSWVKGPLSPEVDHPGPALASL-----LE 119
GR + PEA + + P R P G+SW GP + PGP L + L
Sbjct: 271 GRGPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGP-----EEPGPRLQKVLAKLPLA 325
Query: 120 EEEEDLEGKEEGREDDPEEEGPED----VLTIHVQSLVRARSSYVARQYRSL 167
EEE+ GK G+ + G +D V + +Q L + R ++ + ++L
Sbjct: 326 EEEKRFAGKAGGKL--AKAPGLKDFQIQVQPVRMQKLTKLREEHILMRNQNL 375
Score = 31.6 bits (70), Expect = 1.5
Identities = 15/34 (44%), Positives = 18/34 (52%)
Query: 262 LRRRQTALRAGAGPPGAQGPGPEGQSPAPALRSR 295
L R T AG GPP +QG GP G+ P S+
Sbjct: 253 LPRSPTQDAAGVGPPASQGRGPAGEPMGPEAGSK 286
>gi|4503257 death-domain associated protein isoform a [Homo sapiens]
Length = 740
Score = 34.7 bits (78), Expect = 0.18
Identities = 15/24 (62%), Positives = 19/24 (79%)
Query: 120 EEEEDLEGKEEGREDDPEEEGPED 143
EEEEDLE +EG+EDD EE+ E+
Sbjct: 462 EEEEDLEQMQEGQEDDEEEDEEEE 485
>gi|215422388 death-domain associated protein isoform a [Homo
sapiens]
Length = 740
Score = 34.7 bits (78), Expect = 0.18
Identities = 15/24 (62%), Positives = 19/24 (79%)
Query: 120 EEEEDLEGKEEGREDDPEEEGPED 143
EEEEDLE +EG+EDD EE+ E+
Sbjct: 462 EEEEDLEQMQEGQEDDEEEDEEEE 485
>gi|215422366 death-domain associated protein isoform b [Homo
sapiens]
Length = 752
Score = 34.7 bits (78), Expect = 0.18
Identities = 15/24 (62%), Positives = 19/24 (79%)
Query: 120 EEEEDLEGKEEGREDDPEEEGPED 143
EEEEDLE +EG+EDD EE+ E+
Sbjct: 474 EEEEDLEQMQEGQEDDEEEDEEEE 497
>gi|56790299 pleckstrin and Sec7 domain containing [Homo sapiens]
Length = 1024
Score = 34.7 bits (78), Expect = 0.18
Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 5/111 (4%)
Query: 25 PPPTLGPRDEHTDPVQIGRVQQDTPGKVLSIVNQLYLETHRGWGREQTPQETEPEAAQRH 84
PP G V +GR + + + ++ + Y ET ++ E E EA
Sbjct: 261 PPSPPGVGSRQGSGVAVGRAAKYSETDLDTVPLRCYRETDI----DEVLAERE-EADSAI 315
Query: 85 DPAPRNPAPHGVSWVKGPLSPEVDHPGPALASLLEEEEEDLEGKEEGREDD 135
+ P + P G ++ P + P P+L S E+E++D G EE +D+
Sbjct: 316 ESQPSSEGPPGTAYPPAPRPGPLPGPHPSLGSGNEDEDDDEAGGEEDVDDE 366
>gi|27734961 hypothetical protein LOC160298 [Homo sapiens]
Length = 333
Score = 34.7 bits (78), Expect = 0.18
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 86 PAPRNPAPHGVSWVKGPLSPEVDHPGPALASLLEEEEEDLEGKEEGREDDPEEEGPED 143
P ++P PHG +WV+ LS + P AS E D+ P +EGPED
Sbjct: 213 PLTKDPLPHGANWVRPNLS-IMPPLAPTSASADTTEAADVPPPVPAPPTPPPQEGPED 269
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.135 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,080,514
Number of Sequences: 37866
Number of extensions: 1360625
Number of successful extensions: 11574
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 114
Number of HSP's successfully gapped in prelim test: 195
Number of HSP's that attempted gapping in prelim test: 9866
Number of HSP's gapped (non-prelim): 1482
length of query: 452
length of database: 18,247,518
effective HSP length: 106
effective length of query: 346
effective length of database: 14,233,722
effective search space: 4924867812
effective search space used: 4924867812
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.