Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 38261971
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|38261971 cyclic AMP-regulated phosphoprotein, 21 kD isoform
1 [Homo sapiens]
(812 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|38261971 cyclic AMP-regulated phosphoprotein, 21 kD isoform 1... 1634 0.0
gi|31543535 R3H domain containing 1 [Homo sapiens] 737 0.0
gi|162951884 R3H domain containing 2 [Homo sapiens] 546 e-155
gi|38261965 cyclic AMP-regulated phosphoprotein, 21 kD isoform 2... 170 6e-42
gi|68161522 cyclic AMP-regulated phosphoprotein, 21 kD isoform 2... 170 6e-42
gi|68161520 cyclic AMP-regulated phosphoprotein, 21 kD isoform 2... 170 6e-42
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 79 2e-14
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 79 2e-14
gi|55750053 atrophin-1 [Homo sapiens] 68 3e-11
gi|55750041 atrophin-1 [Homo sapiens] 68 3e-11
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 68 3e-11
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 68 3e-11
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 68 3e-11
gi|50345997 E1A binding protein p300 [Homo sapiens] 66 1e-10
gi|150170670 piccolo isoform 2 [Homo sapiens] 64 7e-10
gi|150378539 piccolo isoform 1 [Homo sapiens] 64 7e-10
gi|56549696 E1A binding protein p400 [Homo sapiens] 63 1e-09
gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens] 62 3e-09
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 61 4e-09
gi|19924099 synapsin I isoform Ia [Homo sapiens] 61 5e-09
gi|19924097 synapsin I isoform Ib [Homo sapiens] 60 8e-09
gi|21312134 mediator complex subunit 15 isoform b [Homo sapiens] 60 1e-08
gi|38788274 bromodomain PHD finger transcription factor isoform ... 59 2e-08
gi|150378543 MYST histone acetyltransferase (monocytic leukemia)... 59 2e-08
gi|150378463 MYST histone acetyltransferase (monocytic leukemia)... 59 2e-08
gi|150378493 MYST histone acetyltransferase (monocytic leukemia)... 59 2e-08
gi|32307128 nuclear receptor coactivator 6 [Homo sapiens] 59 2e-08
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 58 3e-08
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 58 3e-08
gi|157743257 POU domain, class 6, transcription factor 2 [Homo s... 58 4e-08
>gi|38261971 cyclic AMP-regulated phosphoprotein, 21 kD isoform 1
[Homo sapiens]
Length = 812
Score = 1634 bits (4232), Expect = 0.0
Identities = 812/812 (100%), Positives = 812/812 (100%)
Query: 1 MSEQGDLNQAIAEEGGTEQETATPENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGA 60
MSEQGDLNQAIAEEGGTEQETATPENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGA
Sbjct: 1 MSEQGDLNQAIAEEGGTEQETATPENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGA 60
Query: 61 GKGKLTRSLAVCEESSARPGGESLQDQESIHLQLSSFSSLQEEDKSRKDDSEREKEKDKN 120
GKGKLTRSLAVCEESSARPGGESLQDQESIHLQLSSFSSLQEEDKSRKDDSEREKEKDKN
Sbjct: 61 GKGKLTRSLAVCEESSARPGGESLQDQESIHLQLSSFSSLQEEDKSRKDDSEREKEKDKN 120
Query: 121 KDKTSEKPKIRMLSKDCSQEYTDSTGIDLHEFLINTLKNNSRDRMILLKMEQEIIDFIAD 180
KDKTSEKPKIRMLSKDCSQEYTDSTGIDLHEFLINTLKNNSRDRMILLKMEQEIIDFIAD
Sbjct: 121 KDKTSEKPKIRMLSKDCSQEYTDSTGIDLHEFLINTLKNNSRDRMILLKMEQEIIDFIAD 180
Query: 181 NNNHYKKFPQMSSYQRMLVHRVAAYFGLDHNVDQTGKSVIINKTSSTRIPEQRFCEHLKD 240
NNNHYKKFPQMSSYQRMLVHRVAAYFGLDHNVDQTGKSVIINKTSSTRIPEQRFCEHLKD
Sbjct: 181 NNNHYKKFPQMSSYQRMLVHRVAAYFGLDHNVDQTGKSVIINKTSSTRIPEQRFCEHLKD 240
Query: 241 EKGEESQKRFILKRDNSSIDKEDNQQNRMHPFRDDRRSKSIEEREEEYQRVRERIFAHDS 300
EKGEESQKRFILKRDNSSIDKEDNQQNRMHPFRDDRRSKSIEEREEEYQRVRERIFAHDS
Sbjct: 241 EKGEESQKRFILKRDNSSIDKEDNQQNRMHPFRDDRRSKSIEEREEEYQRVRERIFAHDS 300
Query: 301 VCSQESLFVENSRLLEDSNICNETYKKRQLFRGNRDGSGRTSGSRQSSSENELKWSDHQR 360
VCSQESLFVENSRLLEDSNICNETYKKRQLFRGNRDGSGRTSGSRQSSSENELKWSDHQR
Sbjct: 301 VCSQESLFVENSRLLEDSNICNETYKKRQLFRGNRDGSGRTSGSRQSSSENELKWSDHQR 360
Query: 361 AWSSTDSDSSNRNLKPAMTKTASFGGITVLTRGDSTSSTRSTGKLSKAGSESSSSAGSSG 420
AWSSTDSDSSNRNLKPAMTKTASFGGITVLTRGDSTSSTRSTGKLSKAGSESSSSAGSSG
Sbjct: 361 AWSSTDSDSSNRNLKPAMTKTASFGGITVLTRGDSTSSTRSTGKLSKAGSESSSSAGSSG 420
Query: 421 SLSRTHPPLQSTPLVSGVAAGSPGCVPYPENGIGGQVAPSSTSYILLPLEAATGIPPGSI 480
SLSRTHPPLQSTPLVSGVAAGSPGCVPYPENGIGGQVAPSSTSYILLPLEAATGIPPGSI
Sbjct: 421 SLSRTHPPLQSTPLVSGVAAGSPGCVPYPENGIGGQVAPSSTSYILLPLEAATGIPPGSI 480
Query: 481 LLNPHTGQPFVNPDGTPAIYNPPTSQQPLRSAMVGQSQQQPPQQQPSPQPQQQVQPPQPQ 540
LLNPHTGQPFVNPDGTPAIYNPPTSQQPLRSAMVGQSQQQPPQQQPSPQPQQQVQPPQPQ
Sbjct: 481 LLNPHTGQPFVNPDGTPAIYNPPTSQQPLRSAMVGQSQQQPPQQQPSPQPQQQVQPPQPQ 540
Query: 541 MAGPLVTQRDDVATQFGQMTLSRQSSGETPEPPSGPVYPSSLMPQPAQQPSYVIASTGQQ 600
MAGPLVTQRDDVATQFGQMTLSRQSSGETPEPPSGPVYPSSLMPQPAQQPSYVIASTGQQ
Sbjct: 541 MAGPLVTQRDDVATQFGQMTLSRQSSGETPEPPSGPVYPSSLMPQPAQQPSYVIASTGQQ 600
Query: 601 LPTGGFSGSGPPISQQVLQPPPSPQGFVQQPPPAQMPVYYYPSGQYPTSTTQQYRPMAPV 660
LPTGGFSGSGPPISQQVLQPPPSPQGFVQQPPPAQMPVYYYPSGQYPTSTTQQYRPMAPV
Sbjct: 601 LPTGGFSGSGPPISQQVLQPPPSPQGFVQQPPPAQMPVYYYPSGQYPTSTTQQYRPMAPV 660
Query: 661 QYNAQRSQQMPQAAQQAGYQPVLSGQQGFQGLIGVQQPPQSQNVINNQQGTPVQSVMVSY 720
QYNAQRSQQMPQAAQQAGYQPVLSGQQGFQGLIGVQQPPQSQNVINNQQGTPVQSVMVSY
Sbjct: 661 QYNAQRSQQMPQAAQQAGYQPVLSGQQGFQGLIGVQQPPQSQNVINNQQGTPVQSVMVSY 720
Query: 721 PTMSSYQVPMTQGSQGLPQQSYQQPIMLPNQAGQGSLPATGMPVYCNVTPPTPQNNLRLI 780
PTMSSYQVPMTQGSQGLPQQSYQQPIMLPNQAGQGSLPATGMPVYCNVTPPTPQNNLRLI
Sbjct: 721 PTMSSYQVPMTQGSQGLPQQSYQQPIMLPNQAGQGSLPATGMPVYCNVTPPTPQNNLRLI 780
Query: 781 GPHCPSSTVPVMSASCRTNCASMSNAGWQVKF 812
GPHCPSSTVPVMSASCRTNCASMSNAGWQVKF
Sbjct: 781 GPHCPSSTVPVMSASCRTNCASMSNAGWQVKF 812
>gi|31543535 R3H domain containing 1 [Homo sapiens]
Length = 1099
Score = 737 bits (1903), Expect = 0.0
Identities = 418/804 (51%), Positives = 547/804 (68%), Gaps = 88/804 (10%)
Query: 19 QETATPENGIVKSESLDE----------EEKLELQRRLEAQNQERRKSKSGAGKGKLTRS 68
++T EN ++KSE+ + E ++LQR L++ Q ++SKS + K KL RS
Sbjct: 24 KDTTRVEN-LIKSENYGKILVEKNEHCIENNIDLQRPLQSFGQTGKRSKSSS-KLKLVRS 81
Query: 69 LAVCEESSARPGGE-SLQDQESIHLQLSSFSSLQEEDKSRKDDSEREKEKDKNKDKTSEK 127
LAVCEES P E S ++QE I +QL+ S ++E+K KD++E+EK DK K
Sbjct: 82 LAVCEESPPPPAPEISQENQEKIQIQLTQ--SFEKEEKPSKDEAEKEKASDKLPRK---- 135
Query: 128 PKIRMLSKDCSQEYTDSTGIDLHEFLINTLKNNSRDRMILLKMEQEIIDFIADNNNHYKK 187
MLS+D SQEYTDSTGIDLHEFL+NTLKNN RDRM+LLK+EQEI+DFI +N + KK
Sbjct: 136 ----MLSRDSSQEYTDSTGIDLHEFLVNTLKNNPRDRMMLLKLEQEILDFIGNNESPRKK 191
Query: 188 FPQMSSYQRMLVHRVAAYFGLDHNVDQTGKSVIINKTSSTRIPEQRFCEHLKDEKGEESQ 247
FP M+SY RML+HRVAAYFGLDHNVDQ+GKSVI+NKTS+TRIP+Q+F EH+KD+KGE+ Q
Sbjct: 192 FPPMTSYHRMLLHRVAAYFGLDHNVDQSGKSVIVNKTSNTRIPDQKFNEHIKDDKGEDFQ 251
Query: 248 KRFILKRDNSSIDKEDNQQNRMHPFRDDRRSKSIEEREEEYQRVRERIFAHDSVCSQESL 307
KR+ILKRDNSS DK+DNQ +DDRRSKSIEEREEEYQR R+RIF+ DS+CSQE+
Sbjct: 252 KRYILKRDNSSFDKDDNQMRIR--LKDDRRSKSIEEREEEYQRARDRIFSQDSLCSQENY 309
Query: 308 FVENSRLLEDSNICNETYKKRQLFRGNRDGSGRTSGSRQSSSENELKWSDHQRAWSSTDS 367
++ ED+ + T ++RQ+FR N+D SGR++ S QSS+ENELK+S+ R WSSTDS
Sbjct: 310 IIDKRLQDEDA---SSTQQRRQIFRVNKDASGRSTNSHQSSTENELKYSE-PRPWSSTDS 365
Query: 368 DSSNRNLKPAMTKTASFGGITVLTRGDSTSSTRSTGKLSKAGSESSSSAGSS-GSLSRTH 426
DSS RNLKPA+TK +SF GI+VLTRGDS+ S++S G+LSK GSESS S GSS GSLS
Sbjct: 366 DSSLRNLKPAVTKASSFSGISVLTRGDSSGSSKSIGRLSKTGSESSGSVGSSTGSLSHIQ 425
Query: 427 PPLQSTPLVSGVAAGSPGCVPYP----------ENGIGGQVAPSSTSYILLPLEAATGIP 476
PL T L S + G+P V YP + G+ GQVA STS+ LLPLEAA GIP
Sbjct: 426 QPLPGTAL-SQSSHGAP--VVYPTVSTHSSLSFDGGLNGQVASPSTSFFLLPLEAA-GIP 481
Query: 477 PGSILLNPHTGQPFVNPDGTPAIYNPPTSQQPLRSAMVGQSQQQPPQQQPSPQPQQQVQP 536
PGSIL+NP TGQPF+NPDG+P +YNPP +QQP+RS + G P Q P P P Q
Sbjct: 482 PGSILINPQTGQPFINPDGSPVVYNPPMTQQPVRSQVPG------PPQPPLPAPPQ---- 531
Query: 537 PQPQMAGPLVTQRDDVATQFGQMTLSRQSSGETPEPPSGPVYPSSLMPQPAQQPSYVIAS 596
Q A + +D++ +QF M+L+RQ S + +P + ++ S+++ Q QQ Y++ +
Sbjct: 532 ---QPAANHIFSQDNLGSQFSHMSLARQPSADGSDPHAA-MFQSTVVLQSPQQSGYIMTA 587
Query: 597 T--------------------GQQLPTGGFSGSGPPISQQVLQPPPSPQGFVQQPPPAQM 636
GQ +PT G+ SG P+SQ VLQ QG++QQP P QM
Sbjct: 588 APPPHPPPPPPPPPPPPPLPPGQPVPTAGYPASGHPVSQPVLQ----QQGYIQQPSP-QM 642
Query: 637 PVYYYPSGQYPTSTTQQYRPMAPVQYNAQRSQQMPQAAQQAGYQPVLSGQQGFQGLIGVQ 696
P Y G Y S+ QYRP+ V YN+ +Q +PQ AQQ GYQ + + QQ +QG++GVQ
Sbjct: 643 PACYCAPGHY-HSSQPQYRPVPSVHYNSHLNQPLPQPAQQTGYQVIPNQQQNYQGIVGVQ 701
Query: 697 QPPQSQNVINNQQ---GTPVQSVMVSYPTMSSYQVPMTQGSQGLPQQSYQQPIMLPNQAG 753
Q PQSQ++++ Q G +Q V++ Y ++ +YQV + QGSQG+P Q+YQQP+M PNQ+
Sbjct: 702 Q-PQSQSLVSGQPNSIGNQIQGVVIPYTSVPTYQVSLPQGSQGIPHQTYQQPVMFPNQSN 760
Query: 754 QGSLPATGMPVYCNVTPPTPQNNL 777
QGS+P TGMPVY +V PP QNNL
Sbjct: 761 QGSMPTTGMPVYYSVIPPGQQNNL 784
Score = 33.5 bits (75), Expect = 0.81
Identities = 81/322 (25%), Positives = 110/322 (34%), Gaps = 54/322 (16%)
Query: 446 VPYPENGIGGQVAPSSTSYILLPLEAATGI--PPGSILLNPHTGQPFVNPDGTPAIYNPP 503
+P P G QV P+ + G+ P L++ GQP + + P
Sbjct: 675 LPQPAQQTGYQVIPNQQQNY----QGIVGVQQPQSQSLVS---GQPNSIGNQIQGVVIPY 727
Query: 504 TSQQPLRSAMVGQSQQQPPQ--QQPSPQPQQQVQPPQPQMAGPLVTQRDDVATQFGQMTL 561
TS + ++ SQ P Q QQP P Q Q P P+ GQ
Sbjct: 728 TSVPTYQVSLPQGSQGIPHQTYQQPVMFPNQSNQGSMPTTGMPVYYS----VIPPGQQNN 783
Query: 562 SRQSSGETPEPPSGPV-YPSSLMPQPAQQPSYVIASTGQQLPTGGFSGSGPPISQQVLQP 620
S G P S V +P + P +QQ + G P GG G + Q L
Sbjct: 784 LSSSVGYLQHPGSEQVQFPRTTSPCSSQQLQGHQCTAGPPPPPGG----GMVMMQ--LSV 837
Query: 621 PPSPQGFVQQPPPAQMPVYYYPSGQYPTSTTQQYRPMAPVQYNAQRSQQMPQAAQQAGYQ 680
P +PQ PP + YY Q+ + V Q S Q+
Sbjct: 838 PNNPQSCAHSPPQWKQNKYYCDH-----QRGQKCVEFSSVDNIVQHSPQLS--------S 884
Query: 681 PVLSGQQGFQGLIGVQQPPQSQNVINNQQGTPVQSVMVSYPTMSSYQVPMTQGSQ----G 736
P++S Q P Q + + P S+M P S VP S+ G
Sbjct: 885 PIISPAQS-------PAPAQLSTLKTVRPSGPPLSIM---PQFSRPFVPGQGDSRYPLLG 934
Query: 737 LPQQSYQQPIML----PNQAGQ 754
P Q Y P +L PNQ GQ
Sbjct: 935 QPLQ-YNPPAVLHGHIPNQQGQ 955
>gi|162951884 R3H domain containing 2 [Homo sapiens]
Length = 976
Score = 546 bits (1406), Expect = e-155
Identities = 343/761 (45%), Positives = 452/761 (59%), Gaps = 143/761 (18%)
Query: 23 TPENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGAGKGKLTRSLAVCEESSARPGGE 82
TP ++ E D + E QRR R+++KS + K KL RSLAVCEESS
Sbjct: 35 TPSKEEIEKECEDTSLRQETQRRTSNHGHARKRAKSNS-KLKLVRSLAVCEESSTPFADG 93
Query: 83 SLQDQESIHLQLSSFSSLQEEDKSRKDDSEREKEKDKNKDKTSEKPKIRMLSKDCSQEYT 142
L+ Q+ I L +S S +EE+KS KD SE+E +KDKNK+K K MLS+D SQEYT
Sbjct: 94 PLETQDIIQLHISCPSD-KEEEKSTKDVSEKE-DKDKNKEKIPRK----MLSRDSSQEYT 147
Query: 143 DSTGIDLHEFLINTLKNNSRDRMILLKMEQEIIDFIADNNNHYKKFPQMSSYQRMLVHRV 202
DSTGIDLHEFL+NTLK N RDRM+LLK+EQEI++FI DNNN +KKFPQM+SY RML+HRV
Sbjct: 148 DSTGIDLHEFLVNTLKKNPRDRMMLLKLEQEILEFINDNNNQFKKFPQMTSYHRMLLHRV 207
Query: 203 AAYFGLDHNVDQTGKSVIINKTSSTRIPEQRFCEHLKDEKGEESQKRFILKRDNSSIDKE 262
AAYFG+DHNVDQTGK+VIINKTS+TRIPEQRF EH+KDEK E Q+RFILKRD++S+D++
Sbjct: 208 AAYFGMDHNVDQTGKAVIINKTSNTRIPEQRFSEHIKDEKNTEFQQRFILKRDDASMDRD 267
Query: 263 DNQQNRMHPFRDDRRSKSIEEREEEYQRVRERIFAHDSVCSQESLFVENSRLLEDSNICN 322
DNQ + D R SK +
Sbjct: 268 DNQTGQNGYLNDIRLSKEA--------------------------------------FSS 289
Query: 323 ETYKKRQLFRGNRDGSGRTSGSRQSSSENELKWSDHQRAWSSTDSDSSNRNLKPAMTKTA 382
++K+RQ+FRGNR+G RTS SRQSS+++ELK S R WSSTDSD S R+++P +TK +
Sbjct: 290 SSHKRRQIFRGNREGLSRTSSSRQSSTDSELK-SLEPRPWSSTDSDGSVRSMRPPVTKAS 348
Query: 383 SFGGITVLTRGDSTSSTRSTGKLSKAGSESSSSAGSSGSLSRTHPPLQSTPLVSGVAAGS 442
SF GI++LTRGDS SS GS+G +SR G+A G+
Sbjct: 349 SFSGISILTRGDSI---------------GSSKGGSAGRISR-----------PGMALGA 382
Query: 443 PGCVPYPENGIGGQVAPSSTSYILLPLEAATGIPPGSILLNPHTGQPFVNPDGTPAIYNP 502
P + QV S + LLP
Sbjct: 383 P--------EVCNQVTSSQSVRGLLPC--------------------------------- 401
Query: 503 PTSQQPLRSAMVGQSQQQPPQQQPSPQPQQQVQPPQPQMAGPLVTQRDDVATQFGQMTLS 562
T+QQ QQQ QQ P+ P Q QPP + +++Q DD++ FGQM+LS
Sbjct: 402 -TAQQ---------QQQQQQQQLPALPPTPQQQPP---LNNHMISQADDLSNPFGQMSLS 448
Query: 563 RQSSGETPEPPSGPVYPSSLMPQPAQQPSYVIASTGQQLPTGGFS-GSGPPISQQVLQPP 621
RQ S E + PS ++ + L+ Q QQ S+++ASTGQ LPT +S S P +QQVL
Sbjct: 449 RQGSTEAAD-PSAALFQTPLISQHPQQTSFIMASTGQPLPTSNYSTSSHAPPTQQVL--- 504
Query: 622 PSPQGFVQQPPPAQMPVYYYPSGQYPTSTTQQYRPMA-PVQYNAQRSQQMPQAAQQAGYQ 680
PQG++Q PP Q+ V YYP GQYP S QQYRP++ PV Y+ QR QQ+PQ +QQ G Q
Sbjct: 505 -PPQGYMQ--PPQQIQVSYYPPGQYPNS-NQQYRPLSHPVAYSPQRGQQLPQPSQQPGLQ 560
Query: 681 PVLSGQQ--GFQGLIGVQQPPQSQNVINNQQ---GTPVQSVMVSYPTMSSYQVPMTQGSQ 735
P++ QQ +QG+IGVQQ PQ+Q ++++Q+ G +Q ++V Y + SYQVP+ SQ
Sbjct: 561 PMMPNQQQAAYQGMIGVQQ-PQNQGLLSSQRSSMGGQMQGLVVQYTPLPSYQVPVGSDSQ 619
Query: 736 GLPQQSYQQPIMLP-NQAGQGSLPATGMPVYCNVTPPTPQN 775
+ Q +QQP+++P +Q+ QG LPA G+PVY ++ PP QN
Sbjct: 620 NVVQPPFQQPMLVPVSQSVQGGLPAAGVPVYYSMIPPAQQN 660
>gi|38261965 cyclic AMP-regulated phosphoprotein, 21 kD isoform 2
[Homo sapiens]
Length = 89
Score = 170 bits (430), Expect = 6e-42
Identities = 87/87 (100%), Positives = 87/87 (100%)
Query: 1 MSEQGDLNQAIAEEGGTEQETATPENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGA 60
MSEQGDLNQAIAEEGGTEQETATPENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGA
Sbjct: 1 MSEQGDLNQAIAEEGGTEQETATPENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGA 60
Query: 61 GKGKLTRSLAVCEESSARPGGESLQDQ 87
GKGKLTRSLAVCEESSARPGGESLQDQ
Sbjct: 61 GKGKLTRSLAVCEESSARPGGESLQDQ 87
>gi|68161522 cyclic AMP-regulated phosphoprotein, 21 kD isoform 2
[Homo sapiens]
Length = 89
Score = 170 bits (430), Expect = 6e-42
Identities = 87/87 (100%), Positives = 87/87 (100%)
Query: 1 MSEQGDLNQAIAEEGGTEQETATPENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGA 60
MSEQGDLNQAIAEEGGTEQETATPENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGA
Sbjct: 1 MSEQGDLNQAIAEEGGTEQETATPENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGA 60
Query: 61 GKGKLTRSLAVCEESSARPGGESLQDQ 87
GKGKLTRSLAVCEESSARPGGESLQDQ
Sbjct: 61 GKGKLTRSLAVCEESSARPGGESLQDQ 87
>gi|68161520 cyclic AMP-regulated phosphoprotein, 21 kD isoform 2
[Homo sapiens]
Length = 89
Score = 170 bits (430), Expect = 6e-42
Identities = 87/87 (100%), Positives = 87/87 (100%)
Query: 1 MSEQGDLNQAIAEEGGTEQETATPENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGA 60
MSEQGDLNQAIAEEGGTEQETATPENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGA
Sbjct: 1 MSEQGDLNQAIAEEGGTEQETATPENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGA 60
Query: 61 GKGKLTRSLAVCEESSARPGGESLQDQ 87
GKGKLTRSLAVCEESSARPGGESLQDQ
Sbjct: 61 GKGKLTRSLAVCEESSARPGGESLQDQ 87
>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
Length = 2285
Score = 78.6 bits (192), Expect = 2e-14
Identities = 99/373 (26%), Positives = 145/373 (38%), Gaps = 48/373 (12%)
Query: 408 AGSESSSSAGSSGSLSRTHPPLQSTPLVSGVAAGSPGCVPYPENGIG--GQVAPSSTSYI 465
A + ++++A S G+ R+H S P SG P P + + G++ P
Sbjct: 340 AAAAAAAAAASGGAQQRSHHAPMS-PGSSGGGGQPLARTPQPSSPMDQMGKMRPQPYGGT 398
Query: 466 LLPLEAATGIPPGSILLNPHTGQPFVNPDGTPAIYNPPTSQQPLRSAMVGQS--QQQPPQ 523
P G P G + + GQP+ + TP Y P T Q +SAM G S QQ PP
Sbjct: 399 N-PYSQQQGPPSGPQQGHGYPGQPYGSQ--TPQRY-PMTMQGRAQSAMGGLSYTQQIPPY 454
Query: 524 QQPSPQ--------PQQQVQPPQPQMAGPLVTQRDDVATQFGQMTLSRQSSGETPE---- 571
Q P P Q P PQ P +Q+ T Q + +Q + P+
Sbjct: 455 GQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSS 514
Query: 572 ------PPSGPVYPSSLMPQPAQQPSYVIASTGQQLPTGGFSGSGPPISQQVLQPPPSPQ 625
PS P + S P P+QQ ST QQ P S PP SQ Q P
Sbjct: 515 QPPYSQQPSQPPHQQSPAPYPSQQ------STTQQHPQ-----SQPPYSQPQAQSP---- 559
Query: 626 GFVQQPPPAQMPVYYYPSGQYPTSTTQQYRPMAPVQYNAQRSQQMPQAA--QQAGYQPVL 683
+ QQ P P YP +QQ + A Q Q++ Q + QA P +
Sbjct: 560 -YQQQQPQQPAPSTLSQQAAYPQPQSQQSQQTAYSQQRFPPPQELSQDSFGSQASSAPSM 618
Query: 684 SGQQGFQGLIGVQ---QPPQSQNVINNQQGTPVQSVMVSYPTMSSYQVPMTQGSQGLPQQ 740
+ +G Q + + +P ++ + P+ + P +S+ + +QG Q P Q
Sbjct: 619 TSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQ 678
Query: 741 SYQQPIMLPNQAG 753
S P P+ G
Sbjct: 679 SPFSPHTSPHLPG 691
Score = 56.6 bits (135), Expect = 9e-08
Identities = 107/436 (24%), Positives = 149/436 (34%), Gaps = 48/436 (11%)
Query: 364 STDSDSSNRNLKPAMTKTASFGGITVLTRGDSTSSTRSTGKLSKAGSESSSSAGSSGSLS 423
S+ + +S+ + A + + GG G T +T L++ + SS+ G G
Sbjct: 254 SSSASASSSSSSFAQQRFGAMGGGGPSAAGGGTPQPTATPTLNQLLTSPSSARGYQGYPG 313
Query: 424 RTHPPLQSTPLVSGVAAGSPGCVPYPENGIGGQVAPSSTSYILLPLEAATGIPPGSILLN 483
+ P G G A ++ S + PGS +
Sbjct: 314 GDY---SGGPQDGGAGKGPADMASQCWGAAAAAAAAAAASGGAQQRSHHAPMSPGS---S 367
Query: 484 PHTGQPFVNPDGTPAIYNPPTSQQPLRSAMVGQSQQQPPQQQPSPQPQQ-QVQPPQPQMA 542
GQP TP +P +R G + QQ P PQQ P QP
Sbjct: 368 GGGGQPLAR---TPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQPY-- 422
Query: 543 GPLVTQRDDVATQFGQMTLSRQSSGETPEPPSGPVYPSSLMPQPAQQPSYVIASTGQQLP 602
G QR + Q + S PP G PS Q Q P Y QQ P
Sbjct: 423 GSQTPQRYPMTMQGRAQSAMGGLSYTQQIPPYGQQGPSGY-GQQGQTPYY-----NQQSP 476
Query: 603 TGGFSGSGPPISQQVLQPPPSPQGFVQQPPPAQMPVYYYPSGQYPTSTTQQYRPMAPVQY 662
PP SQQ P Q QQ P +Q P Y +Q +P Y
Sbjct: 477 HP--QQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQSPAPY 534
Query: 663 NAQRS--QQMPQAAQQAGYQPVLSGQQGFQGLIGVQQPPQSQNVINNQQGTPVQSVMVSY 720
+Q+S QQ PQ+ QP S PQ+Q+ QQ P Q +
Sbjct: 535 PSQQSTTQQHPQS------QPPYS-------------QPQAQSPYQQQQ--PQQPAPSTL 573
Query: 721 PTMSSYQVPMTQGSQGLPQQSY-QQPIMLPNQAGQGSLPATGMPVYCNVTPPTPQNNLRL 779
++Y P +Q SQ Q +Y QQ P + Q S + + Q ++ L
Sbjct: 574 SQQAAYPQPQSQQSQ---QTAYSQQRFPPPQELSQDSFGSQASSAPSMTSSKGGQEDMNL 630
Query: 780 IGPHCPSSTVPVMSAS 795
PSS +P +S S
Sbjct: 631 SLQSRPSS-LPDLSGS 645
Score = 45.8 bits (107), Expect = 2e-04
Identities = 71/297 (23%), Positives = 102/297 (34%), Gaps = 58/297 (19%)
Query: 494 DGTPAIYNPPTSQQ-------PLRSAMVGQSQQQPPQQQPSPQPQQQVQPPQPQMAGPLV 546
DGT Y PP + P + QQQ P QP P QQQ P PQ
Sbjct: 1374 DGT---YGPPAKRHEGEMYSVPYSTGQGQPQQQQLPPAQPQPASQQQAAQPSPQ------ 1424
Query: 547 TQRDDVATQFGQMTLSRQSSGETPEPPSGP--VYPSSLMPQPAQQPSYVIASTGQQLPTG 604
DV Q+G + ++ P GP +P P + QQ
Sbjct: 1425 ---QDVYNQYGNAYPATATAATERRPAGGPQNQFPFQFGRDRVSAPP---GTNAQQNMPP 1478
Query: 605 GFSGSGPPISQQVLQPPPSPQGFVQQPPPAQMPVYYYPSGQYPTSTTQQYRPMAPVQYNA 664
G S +V Q QG Y Y + Q S P P +
Sbjct: 1479 QMMGGPIQASAEVAQQGTMWQG-------RNDMTYNYANRQSTGSA-----PQGPAYHGV 1526
Query: 665 QRSQQMPQAAQQAGYQPVLSGQQGFQGLIGVQQPPQSQNVINNQQGTPVQSVMVSYPTMS 724
R+ +M Q+A + +G G +QPP + PV ++ P S
Sbjct: 1527 NRTDEMLHTDQRANH-------EGSWPSHGTRQPPYGPS-------APVPP--MTRPPPS 1570
Query: 725 SYQVPMTQGSQGLPQQSYQQPIMLP--NQAGQGSLP--ATGMPVYCNVTPPTPQNNL 777
+YQ P + + +PQ S P+ P N+ P +GM + PP P +++
Sbjct: 1571 NYQPPPSMQNH-IPQVSSPAPLPRPMENRTSPSKSPFLHSGMKMQ-KAGPPVPASHI 1625
Score = 39.7 bits (91), Expect = 0.011
Identities = 90/393 (22%), Positives = 136/393 (34%), Gaps = 66/393 (16%)
Query: 364 STDSDSSNRNLKPAMTKTASFGG-----ITVLTRGDSTSSTRSTGKLSKAGSESS----- 413
S DS S + P+MT +S GG +++ +R S + G+E +
Sbjct: 604 SQDSFGSQASSAPSMT--SSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGV 661
Query: 414 SSAGSSGSLSRTHPPLQS------TPLVSGVAAGSPGCVPYPENGIGGQVAPSSTSYILL 467
S++G S S P QS +P + G+ SP V P + VA S +
Sbjct: 662 STSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPAS-----VAQSRSG---- 712
Query: 468 PLEAATGIPPGSILLNPHTGQPFVNPDGTPAIYNPPTSQQPLRSAMVGQSQQQPPQQQ-P 526
PL A +P + P +GQ + +I +P +Q + G Q+ P Q
Sbjct: 713 PLSPAA-VPGNQMPPRPPSGQ-------SDSIMHPSMNQSSIAQDR-GYMQRNPQMPQYS 763
Query: 527 SPQPQQQVQPPQP---QMAGPLVTQRDDVATQFGQMTLSRQSSGETPEPPSGPVYPSSLM 583
SPQP + P QP Q+ + + + + +G G P P+ P+
Sbjct: 764 SPQPGSALSPRQPSGGQIHTGMGSYQQNSMGSYGPQGGQYGPQGGYPRQPNYNALPN--- 820
Query: 584 PQPAQQPSYVIASTGQQLPTGGFSGSGPPISQQVLQPP-----------PSPQGFVQQPP 632
A PS +A + GG P I PP P PP
Sbjct: 821 ---ANYPSAGMAGGINPMGAGGQMHGQPGIPPYGTLPPGRMSHASMGNRPYGPNMANMPP 877
Query: 633 PAQMPVYYYPSGQYPTSTTQQYRPMAPVQYNAQRSQ-----QMPQAAQQAGYQPVLSGQQ 687
+ P G TQ+ V N+ +++ M Q P G
Sbjct: 878 QVGSGMCPPPGGM--NRKTQETAVAMHVAANSIQNRPPGYPNMNQGGMMGTGPPYGQGIN 935
Query: 688 GFQGLIGVQQPPQSQ--NVINNQQGTPVQSVMV 718
G+I Q PP S + NN G M+
Sbjct: 936 SMAGMINPQGPPYSMGGTMANNSAGMAASPEMM 968
Score = 37.4 bits (85), Expect = 0.056
Identities = 50/189 (26%), Positives = 60/189 (31%), Gaps = 15/189 (7%)
Query: 572 PPSGPVYPSSLMPQPAQQPSYVIASTGQQLPTGGFSGSGPPISQQVLQPPPSPQGFVQ-- 629
P SG PS PQ QQ S G Q T G P SQQ Q + +
Sbjct: 1314 PDSGMYSPSRYPPQQQQQQQQRHDSYGNQFSTQGTPSGSPFPSQQTTMYQQQQQNYKRPM 1373
Query: 630 ---QPPPAQMPVYYYPSGQYPTSTTQQYRPMAPVQYNAQRSQQMPQAAQQAGYQPVLSGQ 686
PPA+ S Y T Q P Q +Q P + QQA QP S Q
Sbjct: 1374 DGTYGPPAKRHEGEMYSVPYSTGQGQ------PQQQQLPPAQPQPASQQQAA-QP--SPQ 1424
Query: 687 QGFQGLIGVQQPPQSQNVINNQ-QGTPVQSVMVSYPTMSSYQVPMTQGSQGLPQQSYQQP 745
Q G P + + G P + P T Q +P Q P
Sbjct: 1425 QDVYNQYGNAYPATATAATERRPAGGPQNQFPFQFGRDRVSAPPGTNAQQNMPPQMMGGP 1484
Query: 746 IMLPNQAGQ 754
I + Q
Sbjct: 1485 IQASAEVAQ 1493
Score = 30.0 bits (66), Expect = 9.0
Identities = 68/298 (22%), Positives = 99/298 (33%), Gaps = 56/298 (18%)
Query: 512 AMVGQSQQQPPQQQPSPQPQQQVQPPQ-PQMAGPLVTQRDDV------ATQFGQMT---- 560
A + QP Q PSP +Q PQ PQ + + D+ +T Q+
Sbjct: 1119 AAADSKKSQPKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQIPPLPG 1178
Query: 561 LSRQSS---GETPEPPSGPVYP--SSLMPQPAQQPSYVIASTGQQLPTGGFSGSGPPISQ 615
+SR +S + S + +S+ P P QPS +T + + + P
Sbjct: 1179 MSRSNSVGIQDAFNDGSDSTFQKRNSMTPNPGYQPS---MNTSDMMGRMSYEPNKDPYGS 1235
Query: 616 QVLQPPPSPQGFVQQPPPAQM------------------PVYYYP-SGQYPTSTTQQ-YR 655
P P Q P M P +YP G Y T+
Sbjct: 1236 MRKAPGSDPFMSSGQGPNGGMGDPYSRAAGPGLGNVAMGPRQHYPYGGPYDRVRTEPGIG 1295
Query: 656 PMAPVQYNAQRSQQMPQAAQQAGYQPVLSGQQGFQGLIGVQQPPQSQNVINNQ---QGTP 712
P + A + MP Y P Q QQ Q + NQ QGTP
Sbjct: 1296 PEGNMSTGAPQPNLMPSNPDSGMYSPSRYPPQ------QQQQQQQRHDSYGNQFSTQGTP 1349
Query: 713 VQSVMVSYPT------MSSYQVPMTQGSQGLPQQSYQ-QPIMLPNQAGQGSLPATGMP 763
S S T +Y+ PM G+ G P + ++ + +P GQG +P
Sbjct: 1350 SGSPFPSQQTTMYQQQQQNYKRPM-DGTYGPPAKRHEGEMYSVPYSTGQGQPQQQQLP 1406
>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
Length = 2068
Score = 78.6 bits (192), Expect = 2e-14
Identities = 99/373 (26%), Positives = 145/373 (38%), Gaps = 48/373 (12%)
Query: 408 AGSESSSSAGSSGSLSRTHPPLQSTPLVSGVAAGSPGCVPYPENGIG--GQVAPSSTSYI 465
A + ++++A S G+ R+H S P SG P P + + G++ P
Sbjct: 340 AAAAAAAAAASGGAQQRSHHAPMS-PGSSGGGGQPLARTPQPSSPMDQMGKMRPQPYGGT 398
Query: 466 LLPLEAATGIPPGSILLNPHTGQPFVNPDGTPAIYNPPTSQQPLRSAMVGQS--QQQPPQ 523
P G P G + + GQP+ + TP Y P T Q +SAM G S QQ PP
Sbjct: 399 N-PYSQQQGPPSGPQQGHGYPGQPYGSQ--TPQRY-PMTMQGRAQSAMGGLSYTQQIPPY 454
Query: 524 QQPSPQ--------PQQQVQPPQPQMAGPLVTQRDDVATQFGQMTLSRQSSGETPE---- 571
Q P P Q P PQ P +Q+ T Q + +Q + P+
Sbjct: 455 GQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSS 514
Query: 572 ------PPSGPVYPSSLMPQPAQQPSYVIASTGQQLPTGGFSGSGPPISQQVLQPPPSPQ 625
PS P + S P P+QQ ST QQ P S PP SQ Q P
Sbjct: 515 QPPYSQQPSQPPHQQSPAPYPSQQ------STTQQHPQ-----SQPPYSQPQAQSP---- 559
Query: 626 GFVQQPPPAQMPVYYYPSGQYPTSTTQQYRPMAPVQYNAQRSQQMPQAA--QQAGYQPVL 683
+ QQ P P YP +QQ + A Q Q++ Q + QA P +
Sbjct: 560 -YQQQQPQQPAPSTLSQQAAYPQPQSQQSQQTAYSQQRFPPPQELSQDSFGSQASSAPSM 618
Query: 684 SGQQGFQGLIGVQ---QPPQSQNVINNQQGTPVQSVMVSYPTMSSYQVPMTQGSQGLPQQ 740
+ +G Q + + +P ++ + P+ + P +S+ + +QG Q P Q
Sbjct: 619 TSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQ 678
Query: 741 SYQQPIMLPNQAG 753
S P P+ G
Sbjct: 679 SPFSPHTSPHLPG 691
Score = 56.6 bits (135), Expect = 9e-08
Identities = 107/436 (24%), Positives = 149/436 (34%), Gaps = 48/436 (11%)
Query: 364 STDSDSSNRNLKPAMTKTASFGGITVLTRGDSTSSTRSTGKLSKAGSESSSSAGSSGSLS 423
S+ + +S+ + A + + GG G T +T L++ + SS+ G G
Sbjct: 254 SSSASASSSSSSFAQQRFGAMGGGGPSAAGGGTPQPTATPTLNQLLTSPSSARGYQGYPG 313
Query: 424 RTHPPLQSTPLVSGVAAGSPGCVPYPENGIGGQVAPSSTSYILLPLEAATGIPPGSILLN 483
+ P G G A ++ S + PGS +
Sbjct: 314 GDY---SGGPQDGGAGKGPADMASQCWGAAAAAAAAAAASGGAQQRSHHAPMSPGS---S 367
Query: 484 PHTGQPFVNPDGTPAIYNPPTSQQPLRSAMVGQSQQQPPQQQPSPQPQQ-QVQPPQPQMA 542
GQP TP +P +R G + QQ P PQQ P QP
Sbjct: 368 GGGGQPLAR---TPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQPY-- 422
Query: 543 GPLVTQRDDVATQFGQMTLSRQSSGETPEPPSGPVYPSSLMPQPAQQPSYVIASTGQQLP 602
G QR + Q + S PP G PS Q Q P Y QQ P
Sbjct: 423 GSQTPQRYPMTMQGRAQSAMGGLSYTQQIPPYGQQGPSGY-GQQGQTPYY-----NQQSP 476
Query: 603 TGGFSGSGPPISQQVLQPPPSPQGFVQQPPPAQMPVYYYPSGQYPTSTTQQYRPMAPVQY 662
PP SQQ P Q QQ P +Q P Y +Q +P Y
Sbjct: 477 HP--QQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQSPAPY 534
Query: 663 NAQRS--QQMPQAAQQAGYQPVLSGQQGFQGLIGVQQPPQSQNVINNQQGTPVQSVMVSY 720
+Q+S QQ PQ+ QP S PQ+Q+ QQ P Q +
Sbjct: 535 PSQQSTTQQHPQS------QPPYS-------------QPQAQSPYQQQQ--PQQPAPSTL 573
Query: 721 PTMSSYQVPMTQGSQGLPQQSY-QQPIMLPNQAGQGSLPATGMPVYCNVTPPTPQNNLRL 779
++Y P +Q SQ Q +Y QQ P + Q S + + Q ++ L
Sbjct: 574 SQQAAYPQPQSQQSQ---QTAYSQQRFPPPQELSQDSFGSQASSAPSMTSSKGGQEDMNL 630
Query: 780 IGPHCPSSTVPVMSAS 795
PSS +P +S S
Sbjct: 631 SLQSRPSS-LPDLSGS 645
Score = 39.7 bits (91), Expect = 0.011
Identities = 90/393 (22%), Positives = 136/393 (34%), Gaps = 66/393 (16%)
Query: 364 STDSDSSNRNLKPAMTKTASFGG-----ITVLTRGDSTSSTRSTGKLSKAGSESS----- 413
S DS S + P+MT +S GG +++ +R S + G+E +
Sbjct: 604 SQDSFGSQASSAPSMT--SSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGV 661
Query: 414 SSAGSSGSLSRTHPPLQS------TPLVSGVAAGSPGCVPYPENGIGGQVAPSSTSYILL 467
S++G S S P QS +P + G+ SP V P + VA S +
Sbjct: 662 STSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPAS-----VAQSRSG---- 712
Query: 468 PLEAATGIPPGSILLNPHTGQPFVNPDGTPAIYNPPTSQQPLRSAMVGQSQQQPPQQQ-P 526
PL A +P + P +GQ + +I +P +Q + G Q+ P Q
Sbjct: 713 PLSPAA-VPGNQMPPRPPSGQ-------SDSIMHPSMNQSSIAQDR-GYMQRNPQMPQYS 763
Query: 527 SPQPQQQVQPPQP---QMAGPLVTQRDDVATQFGQMTLSRQSSGETPEPPSGPVYPSSLM 583
SPQP + P QP Q+ + + + + +G G P P+ P+
Sbjct: 764 SPQPGSALSPRQPSGGQIHTGMGSYQQNSMGSYGPQGGQYGPQGGYPRQPNYNALPN--- 820
Query: 584 PQPAQQPSYVIASTGQQLPTGGFSGSGPPISQQVLQPP-----------PSPQGFVQQPP 632
A PS +A + GG P I PP P PP
Sbjct: 821 ---ANYPSAGMAGGINPMGAGGQMHGQPGIPPYGTLPPGRMSHASMGNRPYGPNMANMPP 877
Query: 633 PAQMPVYYYPSGQYPTSTTQQYRPMAPVQYNAQRSQ-----QMPQAAQQAGYQPVLSGQQ 687
+ P G TQ+ V N+ +++ M Q P G
Sbjct: 878 QVGSGMCPPPGGM--NRKTQETAVAMHVAANSIQNRPPGYPNMNQGGMMGTGPPYGQGIN 935
Query: 688 GFQGLIGVQQPPQSQ--NVINNQQGTPVQSVMV 718
G+I Q PP S + NN G M+
Sbjct: 936 SMAGMINPQGPPYSMGGTMANNSAGMAASPEMM 968
Score = 35.0 bits (79), Expect = 0.28
Identities = 34/120 (28%), Positives = 44/120 (36%), Gaps = 17/120 (14%)
Query: 572 PPSGPVYPSSLMPQPAQQPSYVIASTGQQLPTGGFSGSGPPI----------SQQVLQPP 621
P SG PS PQ QQ S G Q T G + SG P QQV P
Sbjct: 1314 PDSGMYSPSRYPPQQQQQQQQRHDSYGNQFSTQG-TPSGSPFPSQQTTMYQQQQQVSSPA 1372
Query: 622 PSPQGFVQQPPPAQMPVYYYPSGQYPTSTTQQYRPMAPVQYNAQRSQQMPQAAQQAGYQP 681
P P+ + P++ P + SG Q+ P P + A Q P + + P
Sbjct: 1373 PLPRPMENRTSPSKSP--FLHSGM----KMQKAGPPVPASHIAPAPVQPPMIRRDITFPP 1426
Score = 33.9 bits (76), Expect = 0.62
Identities = 64/264 (24%), Positives = 94/264 (35%), Gaps = 40/264 (15%)
Query: 366 DSDSSNRNLKPAMTKTASFGGITVLTRGDSTSSTRSTGKLSKAGSESSSSAGSSGSLSRT 425
+S + N +P+M + G ++ D S R GS+ S+G +
Sbjct: 1203 NSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGSMRKA-----PGSDPFMSSGQGPNGGMG 1257
Query: 426 HPPLQST-PLVSGVAAGSPGCVPYPENGIGGQVAPSSTSYILLPL-EAATGIP-PGSILL 482
P ++ P + VA G PY GG T + P +TG P P +
Sbjct: 1258 DPYSRAAGPGLGNVAMGPRQHYPY-----GGPYDRVRTEPGIGPEGNMSTGAPQPNLMPS 1312
Query: 483 NPHTGQPFVNPDGTPAIYNPPTSQQPL-RSAMVGQ--SQQQPPQQQPSP-------QPQQ 532
NP +G +P+ Y P QQ R G S Q P P P Q QQ
Sbjct: 1313 NPDSGMY------SPSRYPPQQQQQQQQRHDSYGNQFSTQGTPSGSPFPSQQTTMYQQQQ 1366
Query: 533 QVQPPQPQMAGPLVTQRDDVATQFGQMTLSRQSSGETPEPPSGPVYPSSLMPQPAQQPSY 592
QV P P + P+ + + F + Q +G PV S + P P Q P
Sbjct: 1367 QVSSPAP-LPRPMENRTSPSKSPFLHSGMKMQKAGP-------PVPASHIAPAPVQPP-- 1416
Query: 593 VIASTGQQLPTGGFSGSGPPISQQ 616
+ P G + P + Q+
Sbjct: 1417 -MIRRDITFPPGSVEATQPVLKQR 1439
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 68.2 bits (165), Expect = 3e-11
Identities = 110/427 (25%), Positives = 149/427 (34%), Gaps = 65/427 (15%)
Query: 407 KAGSESSSSAGSSGSLSRTHPPLQSTPLV--SGVAAGSPGCVPYPENGIGGQVAPSSTSY 464
K G +SS G +G + HPP +TP+ S A+G+P P P +GG PS+
Sbjct: 236 KGGGAASSVGGPNGG--KQHPP-PTTPISVSSSGASGAPPTKP-PTTPVGGGNLPSAPPP 291
Query: 465 ILLPLEAATGIPPGSILLNPHTGQPFVNPDGTPAIYNPPTSQQPLRSAM-----VGQSQ- 518
P +PP P +P N +P P QPL + +GQ
Sbjct: 292 ANFP-HVTPNLPP------PPALRPLNNASASP----PGLGAQPLPGHLPSPHAMGQGMG 340
Query: 519 ------QQPPQQQPSPQ--PQQQVQPPQPQMAGPLVTQRDDVATQFGQMTLSRQSSGETP 570
++ P PSP P P P M P + A + S S+ P
Sbjct: 341 GLPPGPEKGPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFP 400
Query: 571 EPPSGPVYPSSLMPQPA-----QQPSYVIASTGQQLPTGGFSGSGPPISQQVLQPPPSPQ 625
+ P YP S P + Q P Y T LP+ GP PPP P
Sbjct: 401 ASQALPSYPHSFPPPTSLSVSNQPPKY----TQPSLPSQAVWSQGP--------PPPPPY 448
Query: 626 GFVQQPPPAQMPVYYYPSGQYPTSTTQQYRPMAPVQYNAQRSQQMPQAAQQAGYQPVLSG 685
G + A G +P ST Q PV + QQ Q QQ Q
Sbjct: 449 GRLLANSNAH-------PGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQ--QQ 499
Query: 686 QQGFQGLIGVQQPPQSQNVINNQQGTPVQSVMVSYPTMSSYQVPMTQGSQGLP----QQS 741
QQ G G P + + +S P++ S + P G LP Q S
Sbjct: 500 QQQHHGNSGPPPPGAFPHPLEGGSSHHAHPYAMS-PSLGSLR-PYPPGPAHLPPPHSQVS 557
Query: 742 YQQ--PIMLPNQAGQGSLPATGMPVYCNVTPPTPQNNLRLIGPHCPSSTVPVMSASCRTN 799
Y Q P P + S +T Y P Q P P TV SA+ T
Sbjct: 558 YSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPPVPTVTTSSATLSTV 617
Query: 800 CASMSNA 806
A+++++
Sbjct: 618 IATVASS 624
Score = 48.1 bits (113), Expect = 3e-05
Identities = 66/259 (25%), Positives = 88/259 (33%), Gaps = 41/259 (15%)
Query: 406 SKAGSESSSSAGSSGSLSRTHPPLQSTPLVSGVAAGSPGCVPYPENGIGGQVAPSSTSYI 465
S + + +SSS+ SS S + P Q+ P P P P + P +
Sbjct: 379 SSSSAAASSSSSSSSSSASPFPASQALP-------SYPHSFP-PPTSLSVSNQPPKYTQP 430
Query: 466 LLPLEA--ATGIPPGSILLNPHTGQPFVNPDGTPAIYNPPTSQQPLRSAMVGQSQQQPPQ 523
LP +A + G PP P G+ N + P + P T Q V Q
Sbjct: 431 SLPSQAVWSQGPPPP-----PPYGRLLANSNAHPGPFPPSTGAQSTAHPPVSTHHHHHQQ 485
Query: 524 QQPSPQPQQQVQPPQ--------PQMAGPLVTQRDDVATQFGQMTLSRQSSGETPEPPSG 575
QQ Q QQQ Q Q P G + ++ S G P G
Sbjct: 486 QQQQQQQQQQQQQQQQQHHGNSGPPPPGAFPHPLEGGSSHHAHPYAMSPSLGSLRPYPPG 545
Query: 576 PVYPSSLMPQPAQQPSYVIASTGQQLPTGGFSGSGPPISQQVLQPPPSPQGF--VQQPPP 633
P + +P P Q SY A +GPP+S + QG P P
Sbjct: 546 PAH----LPPPHSQVSYSQAGP-----------NGPPVSSSSNSSSSTSQGSYPCSHPSP 590
Query: 634 AQMPV-YYYPSGQYPTSTT 651
+Q P YP PT TT
Sbjct: 591 SQGPQGAPYPFPPVPTVTT 609
Score = 39.7 bits (91), Expect = 0.011
Identities = 57/233 (24%), Positives = 80/233 (34%), Gaps = 57/233 (24%)
Query: 408 AGSESSSSAGSSGSLSRTHPPLQSTPLVSGVAAGSPGCVPYPENGIGGQVAPSSTSYILL 467
+ S +SSS+ S GS +HP + P PYP + S+T ++
Sbjct: 569 SSSSNSSSSTSQGSYPCSHPS----------PSQGPQGAPYPFPPVPTVTTSSATLSTVI 618
Query: 468 PLEAATGIPPGSILLNPHTGQPFVNPDGTPAIYNPPTSQQPLRSAMVGQSQQQPPQ-QQP 526
A++ P G +P P+ +P Y T G PP +
Sbjct: 619 ATVASS--PAGYKTASPPGPPPYGKRAPSPGAYKTATPP--------GYKPGSPPSFRTG 668
Query: 527 SPQPQQQVQPPQPQMAGPLVTQRDDVATQFGQMTLSRQSSGETPEPPSGPVYPSSLMPQP 586
+P + PP AGP G + G P PP+GP SL P P
Sbjct: 669 TPPGYRGTSPP----AGP------------GTFKPGSPTVGPGPLPPAGPSGLPSLPPPP 712
Query: 587 AQQPSYVIASTGQQLPTGGFSGSGPPIS-QQVLQPPPSPQGFVQQP-PPAQMP 637
A SGPP+S Q+ Q P + P PPA+ P
Sbjct: 713 AA------------------PASGPPLSATQIKQEPAEEYETPESPVPPARSP 747
Score = 37.4 bits (85), Expect = 0.056
Identities = 50/221 (22%), Positives = 70/221 (31%), Gaps = 31/221 (14%)
Query: 557 GQMTLSRQSSGETPEPPSGPVYPSSLMPQPAQQPSYVIASTGQQ-----------LPTGG 605
G + SS + P+ P +P L P Q P ST +Q PTG
Sbjct: 139 GSVENDSDSSSGLSQGPARPYHPPPLFPPSPQPPD----STPRQPEASFEPHPSVTPTGY 194
Query: 606 FSGSGPPISQQVL----QPPPSPQ-------GFVQQPPPAQMPVYYYPSGQYPTSTTQQY 654
+ PP S+ PPP PQ G + PP S P Q
Sbjct: 195 HAPMEPPTSRMFQAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHP 254
Query: 655 RPMAPVQYNAQRSQ-----QMPQAAQQAGYQPVLSGQQGFQGLIGVQQPPQSQNVINNQQ 709
P P+ ++ + + P G P F + PP + +NN
Sbjct: 255 PPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNAS 314
Query: 710 GTPVQSVMVSYPTMSSYQVPMTQGSQGLPQQSYQQPIMLPN 750
+P P M QG GLP + P + P+
Sbjct: 315 ASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPS 355
Score = 36.6 bits (83), Expect = 0.096
Identities = 60/221 (27%), Positives = 73/221 (33%), Gaps = 47/221 (21%)
Query: 395 STSSTRSTGKLSKAGSESSSSAG----------------SSGSLSRTHPPLQSTPLVSGV 438
S++S+ ST + S S S S G SS +LS + S+P
Sbjct: 571 SSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASSP-AGYK 629
Query: 439 AAGSPGCVPYPENGIGGQVAPSSTSYILLPLEAATGIPPGSILLNPHTGQPFVNPDGTPA 498
A PG PY G+ APS +Y T PPG G P GTP
Sbjct: 630 TASPPGPPPY------GKRAPSPGAY-------KTATPPGY-----KPGSPPSFRTGTPP 671
Query: 499 IY---NPPTSQQPLRSAMVGQSQQQPPQQQPSPQPQQQVQPPQPQMAGPLVTQRDDVATQ 555
Y +PP + P PS P P P PL ATQ
Sbjct: 672 GYRGTSPPAGPGTFKPGSPTVGPGPLPPAGPSGLPSLPPPPAAPASGPPLS------ATQ 725
Query: 556 FGQMTLSRQSSGETPEPPSGPVYPSSLMPQPAQQPSYVIAS 596
Q ETPE P P S P+ PS+ S
Sbjct: 726 IKQEPAEEY---ETPESPVPPARSPSPPPKVVDVPSHASQS 763
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 68.2 bits (165), Expect = 3e-11
Identities = 110/427 (25%), Positives = 149/427 (34%), Gaps = 65/427 (15%)
Query: 407 KAGSESSSSAGSSGSLSRTHPPLQSTPLV--SGVAAGSPGCVPYPENGIGGQVAPSSTSY 464
K G +SS G +G + HPP +TP+ S A+G+P P P +GG PS+
Sbjct: 236 KGGGAASSVGGPNGG--KQHPP-PTTPISVSSSGASGAPPTKP-PTTPVGGGNLPSAPPP 291
Query: 465 ILLPLEAATGIPPGSILLNPHTGQPFVNPDGTPAIYNPPTSQQPLRSAM-----VGQSQ- 518
P +PP P +P N +P P QPL + +GQ
Sbjct: 292 ANFP-HVTPNLPP------PPALRPLNNASASP----PGLGAQPLPGHLPSPHAMGQGMG 340
Query: 519 ------QQPPQQQPSPQ--PQQQVQPPQPQMAGPLVTQRDDVATQFGQMTLSRQSSGETP 570
++ P PSP P P P M P + A + S S+ P
Sbjct: 341 GLPPGPEKGPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFP 400
Query: 571 EPPSGPVYPSSLMPQPA-----QQPSYVIASTGQQLPTGGFSGSGPPISQQVLQPPPSPQ 625
+ P YP S P + Q P Y T LP+ GP PPP P
Sbjct: 401 ASQALPSYPHSFPPPTSLSVSNQPPKY----TQPSLPSQAVWSQGP--------PPPPPY 448
Query: 626 GFVQQPPPAQMPVYYYPSGQYPTSTTQQYRPMAPVQYNAQRSQQMPQAAQQAGYQPVLSG 685
G + A G +P ST Q PV + QQ Q QQ Q
Sbjct: 449 GRLLANSNAH-------PGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQ--QQ 499
Query: 686 QQGFQGLIGVQQPPQSQNVINNQQGTPVQSVMVSYPTMSSYQVPMTQGSQGLP----QQS 741
QQ G G P + + +S P++ S + P G LP Q S
Sbjct: 500 QQQHHGNSGPPPPGAFPHPLEGGSSHHAHPYAMS-PSLGSLR-PYPPGPAHLPPPHSQVS 557
Query: 742 YQQ--PIMLPNQAGQGSLPATGMPVYCNVTPPTPQNNLRLIGPHCPSSTVPVMSASCRTN 799
Y Q P P + S +T Y P Q P P TV SA+ T
Sbjct: 558 YSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPPVPTVTTSSATLSTV 617
Query: 800 CASMSNA 806
A+++++
Sbjct: 618 IATVASS 624
Score = 48.1 bits (113), Expect = 3e-05
Identities = 66/259 (25%), Positives = 88/259 (33%), Gaps = 41/259 (15%)
Query: 406 SKAGSESSSSAGSSGSLSRTHPPLQSTPLVSGVAAGSPGCVPYPENGIGGQVAPSSTSYI 465
S + + +SSS+ SS S + P Q+ P P P P + P +
Sbjct: 379 SSSSAAASSSSSSSSSSASPFPASQALP-------SYPHSFP-PPTSLSVSNQPPKYTQP 430
Query: 466 LLPLEA--ATGIPPGSILLNPHTGQPFVNPDGTPAIYNPPTSQQPLRSAMVGQSQQQPPQ 523
LP +A + G PP P G+ N + P + P T Q V Q
Sbjct: 431 SLPSQAVWSQGPPPP-----PPYGRLLANSNAHPGPFPPSTGAQSTAHPPVSTHHHHHQQ 485
Query: 524 QQPSPQPQQQVQPPQ--------PQMAGPLVTQRDDVATQFGQMTLSRQSSGETPEPPSG 575
QQ Q QQQ Q Q P G + ++ S G P G
Sbjct: 486 QQQQQQQQQQQQQQQQQHHGNSGPPPPGAFPHPLEGGSSHHAHPYAMSPSLGSLRPYPPG 545
Query: 576 PVYPSSLMPQPAQQPSYVIASTGQQLPTGGFSGSGPPISQQVLQPPPSPQGF--VQQPPP 633
P + +P P Q SY A +GPP+S + QG P P
Sbjct: 546 PAH----LPPPHSQVSYSQAGP-----------NGPPVSSSSNSSSSTSQGSYPCSHPSP 590
Query: 634 AQMPV-YYYPSGQYPTSTT 651
+Q P YP PT TT
Sbjct: 591 SQGPQGAPYPFPPVPTVTT 609
Score = 39.7 bits (91), Expect = 0.011
Identities = 57/233 (24%), Positives = 80/233 (34%), Gaps = 57/233 (24%)
Query: 408 AGSESSSSAGSSGSLSRTHPPLQSTPLVSGVAAGSPGCVPYPENGIGGQVAPSSTSYILL 467
+ S +SSS+ S GS +HP + P PYP + S+T ++
Sbjct: 569 SSSSNSSSSTSQGSYPCSHPS----------PSQGPQGAPYPFPPVPTVTTSSATLSTVI 618
Query: 468 PLEAATGIPPGSILLNPHTGQPFVNPDGTPAIYNPPTSQQPLRSAMVGQSQQQPPQ-QQP 526
A++ P G +P P+ +P Y T G PP +
Sbjct: 619 ATVASS--PAGYKTASPPGPPPYGKRAPSPGAYKTATPP--------GYKPGSPPSFRTG 668
Query: 527 SPQPQQQVQPPQPQMAGPLVTQRDDVATQFGQMTLSRQSSGETPEPPSGPVYPSSLMPQP 586
+P + PP AGP G + G P PP+GP SL P P
Sbjct: 669 TPPGYRGTSPP----AGP------------GTFKPGSPTVGPGPLPPAGPSGLPSLPPPP 712
Query: 587 AQQPSYVIASTGQQLPTGGFSGSGPPIS-QQVLQPPPSPQGFVQQP-PPAQMP 637
A SGPP+S Q+ Q P + P PPA+ P
Sbjct: 713 AA------------------PASGPPLSATQIKQEPAEEYETPESPVPPARSP 747
Score = 37.4 bits (85), Expect = 0.056
Identities = 50/221 (22%), Positives = 70/221 (31%), Gaps = 31/221 (14%)
Query: 557 GQMTLSRQSSGETPEPPSGPVYPSSLMPQPAQQPSYVIASTGQQ-----------LPTGG 605
G + SS + P+ P +P L P Q P ST +Q PTG
Sbjct: 139 GSVENDSDSSSGLSQGPARPYHPPPLFPPSPQPPD----STPRQPEASFEPHPSVTPTGY 194
Query: 606 FSGSGPPISQQVL----QPPPSPQ-------GFVQQPPPAQMPVYYYPSGQYPTSTTQQY 654
+ PP S+ PPP PQ G + PP S P Q
Sbjct: 195 HAPMEPPTSRMFQAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHP 254
Query: 655 RPMAPVQYNAQRSQ-----QMPQAAQQAGYQPVLSGQQGFQGLIGVQQPPQSQNVINNQQ 709
P P+ ++ + + P G P F + PP + +NN
Sbjct: 255 PPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNAS 314
Query: 710 GTPVQSVMVSYPTMSSYQVPMTQGSQGLPQQSYQQPIMLPN 750
+P P M QG GLP + P + P+
Sbjct: 315 ASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPS 355
Score = 36.6 bits (83), Expect = 0.096
Identities = 60/221 (27%), Positives = 73/221 (33%), Gaps = 47/221 (21%)
Query: 395 STSSTRSTGKLSKAGSESSSSAG----------------SSGSLSRTHPPLQSTPLVSGV 438
S++S+ ST + S S S S G SS +LS + S+P
Sbjct: 571 SSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASSP-AGYK 629
Query: 439 AAGSPGCVPYPENGIGGQVAPSSTSYILLPLEAATGIPPGSILLNPHTGQPFVNPDGTPA 498
A PG PY G+ APS +Y T PPG G P GTP
Sbjct: 630 TASPPGPPPY------GKRAPSPGAY-------KTATPPGY-----KPGSPPSFRTGTPP 671
Query: 499 IY---NPPTSQQPLRSAMVGQSQQQPPQQQPSPQPQQQVQPPQPQMAGPLVTQRDDVATQ 555
Y +PP + P PS P P P PL ATQ
Sbjct: 672 GYRGTSPPAGPGTFKPGSPTVGPGPLPPAGPSGLPSLPPPPAAPASGPPLS------ATQ 725
Query: 556 FGQMTLSRQSSGETPEPPSGPVYPSSLMPQPAQQPSYVIAS 596
Q ETPE P P S P+ PS+ S
Sbjct: 726 IKQEPAEEY---ETPESPVPPARSPSPPPKVVDVPSHASQS 763
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 68.2 bits (165), Expect = 3e-11
Identities = 121/532 (22%), Positives = 185/532 (34%), Gaps = 119/532 (22%)
Query: 338 SGRTSGSRQSSSENELKWSDHQRAWSSTDSDSSN--RNLKPAMTKTASFGGITVLTRGDS 395
SGR S S S+S N+ K +++ ++S+ ++ K K AS D
Sbjct: 55 SGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASD-----TEEADR 109
Query: 396 TSSTRS-TGKLSKAGSESSSSAGSSGSLSRTHPPLQSTPLVSGVAAGSPGCVPYPENGIG 454
TSS ++ T ++S+ S S SS S S + + +P P++
Sbjct: 110 TSSKKTKTQEISRPNSPSEGEGESSDSRSVNDEGSSDPKDIDQDNRSTSPSIPSPQDNES 169
Query: 455 GQVAPSSTSYILLP---LEAATGI-------PPGSILL---NPHTGQPFVNPDGTPAIYN 501
+ + + L+A TG+ PPG+ L P V P G+P
Sbjct: 170 DSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQ 229
Query: 502 PPTSQQ----PLRSAMVGQSQQQPPQQQPSPQPQQQVQPPQPQMAGPLVTQRDDVATQFG 557
P Q P+ + Q+ PQ+ PSP P PP P
Sbjct: 230 APNQPQAPTAPVPHTHIQQAPALHPQRPPSPHP-----PPHP------------------ 266
Query: 558 QMTLSRQSSGETPEPPSGPVYPSSLMPQPAQQPSYVIASTGQQLPTGGFSGSGPPISQQV 617
+P PP P+ S+ P PS+ Q P G S P+ Q
Sbjct: 267 -----------SPHPPLQPLTGSAGQP---SAPSHAQPPLHGQGPPGPHSLQAGPLLQH- 311
Query: 618 LQPPPSPQGFVQQPPPAQMPVYYYPSGQYPTSTTQQYRPMAPVQYNAQRSQQMPQ----- 672
PP P G Q Q P+ P+ YP ++ Q P +A +SQQ P+
Sbjct: 312 -PGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQ-----LPASQSALQSQQPPREQPLP 365
Query: 673 ---------------------AAQQAGYQPVLSGQQGFQGLIGVQQPPQSQNVINNQQGT 711
A Q + P LSG F + PP +
Sbjct: 366 PAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALK--------- 416
Query: 712 PVQSVMVSYPTMSSYQVP--MTQGSQGLPQQSYQQPIMLPNQ---AGQGSLPATGM---- 762
P+ S+ +P S++ P + SQ LP Q P + +Q S P TG+
Sbjct: 417 PLSSLSTHHPP-SAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVA 475
Query: 763 --PVYCNVTPPTPQNNLRLIGPHCPSSTVPVM--SASCRTNCASMSNAGWQV 810
P + P P + P CPS++ P S + C+ + +G +
Sbjct: 476 PQPPFAQ-HPFVPGGPPPITPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSI 526
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 68.2 bits (165), Expect = 3e-11
Identities = 121/532 (22%), Positives = 185/532 (34%), Gaps = 119/532 (22%)
Query: 338 SGRTSGSRQSSSENELKWSDHQRAWSSTDSDSSN--RNLKPAMTKTASFGGITVLTRGDS 395
SGR S S S+S N+ K +++ ++S+ ++ K K AS D
Sbjct: 609 SGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASD-----TEEADR 663
Query: 396 TSSTRS-TGKLSKAGSESSSSAGSSGSLSRTHPPLQSTPLVSGVAAGSPGCVPYPENGIG 454
TSS ++ T ++S+ S S SS S S + + +P P++
Sbjct: 664 TSSKKTKTQEISRPNSPSEGEGESSDSRSVNDEGSSDPKDIDQDNRSTSPSIPSPQDNES 723
Query: 455 GQVAPSSTSYILLP---LEAATGI-------PPGSILL---NPHTGQPFVNPDGTPAIYN 501
+ + + L+A TG+ PPG+ L P V P G+P
Sbjct: 724 DSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQ 783
Query: 502 PPTSQQ----PLRSAMVGQSQQQPPQQQPSPQPQQQVQPPQPQMAGPLVTQRDDVATQFG 557
P Q P+ + Q+ PQ+ PSP P PP P
Sbjct: 784 APNQPQAPTAPVPHTHIQQAPALHPQRPPSPHP-----PPHP------------------ 820
Query: 558 QMTLSRQSSGETPEPPSGPVYPSSLMPQPAQQPSYVIASTGQQLPTGGFSGSGPPISQQV 617
+P PP P+ S+ P PS+ Q P G S P+ Q
Sbjct: 821 -----------SPHPPLQPLTGSAGQP---SAPSHAQPPLHGQGPPGPHSLQAGPLLQH- 865
Query: 618 LQPPPSPQGFVQQPPPAQMPVYYYPSGQYPTSTTQQYRPMAPVQYNAQRSQQMPQ----- 672
PP P G Q Q P+ P+ YP ++ Q P +A +SQQ P+
Sbjct: 866 -PGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQ-----LPASQSALQSQQPPREQPLP 919
Query: 673 ---------------------AAQQAGYQPVLSGQQGFQGLIGVQQPPQSQNVINNQQGT 711
A Q + P LSG F + PP +
Sbjct: 920 PAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALK--------- 970
Query: 712 PVQSVMVSYPTMSSYQVP--MTQGSQGLPQQSYQQPIMLPNQ---AGQGSLPATGM---- 762
P+ S+ +P S++ P + SQ LP Q P + +Q S P TG+
Sbjct: 971 PLSSLSTHHPP-SAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVA 1029
Query: 763 --PVYCNVTPPTPQNNLRLIGPHCPSSTVPVM--SASCRTNCASMSNAGWQV 810
P + P P + P CPS++ P S + C+ + +G +
Sbjct: 1030 PQPPFAQ-HPFVPGGPPPITPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSI 1080
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 68.2 bits (165), Expect = 3e-11
Identities = 121/532 (22%), Positives = 185/532 (34%), Gaps = 119/532 (22%)
Query: 338 SGRTSGSRQSSSENELKWSDHQRAWSSTDSDSSN--RNLKPAMTKTASFGGITVLTRGDS 395
SGR S S S+S N+ K +++ ++S+ ++ K K AS D
Sbjct: 609 SGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASD-----TEEADR 663
Query: 396 TSSTRS-TGKLSKAGSESSSSAGSSGSLSRTHPPLQSTPLVSGVAAGSPGCVPYPENGIG 454
TSS ++ T ++S+ S S SS S S + + +P P++
Sbjct: 664 TSSKKTKTQEISRPNSPSEGEGESSDSRSVNDEGSSDPKDIDQDNRSTSPSIPSPQDNES 723
Query: 455 GQVAPSSTSYILLP---LEAATGI-------PPGSILL---NPHTGQPFVNPDGTPAIYN 501
+ + + L+A TG+ PPG+ L P V P G+P
Sbjct: 724 DSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQ 783
Query: 502 PPTSQQ----PLRSAMVGQSQQQPPQQQPSPQPQQQVQPPQPQMAGPLVTQRDDVATQFG 557
P Q P+ + Q+ PQ+ PSP P PP P
Sbjct: 784 APNQPQAPTAPVPHTHIQQAPALHPQRPPSPHP-----PPHP------------------ 820
Query: 558 QMTLSRQSSGETPEPPSGPVYPSSLMPQPAQQPSYVIASTGQQLPTGGFSGSGPPISQQV 617
+P PP P+ S+ P PS+ Q P G S P+ Q
Sbjct: 821 -----------SPHPPLQPLTGSAGQP---SAPSHAQPPLHGQGPPGPHSLQAGPLLQH- 865
Query: 618 LQPPPSPQGFVQQPPPAQMPVYYYPSGQYPTSTTQQYRPMAPVQYNAQRSQQMPQ----- 672
PP P G Q Q P+ P+ YP ++ Q P +A +SQQ P+
Sbjct: 866 -PGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQ-----LPASQSALQSQQPPREQPLP 919
Query: 673 ---------------------AAQQAGYQPVLSGQQGFQGLIGVQQPPQSQNVINNQQGT 711
A Q + P LSG F + PP +
Sbjct: 920 PAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALK--------- 970
Query: 712 PVQSVMVSYPTMSSYQVP--MTQGSQGLPQQSYQQPIMLPNQ---AGQGSLPATGM---- 762
P+ S+ +P S++ P + SQ LP Q P + +Q S P TG+
Sbjct: 971 PLSSLSTHHPP-SAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVA 1029
Query: 763 --PVYCNVTPPTPQNNLRLIGPHCPSSTVPVM--SASCRTNCASMSNAGWQV 810
P + P P + P CPS++ P S + C+ + +G +
Sbjct: 1030 PQPPFAQ-HPFVPGGPPPITPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSI 1080
>gi|50345997 E1A binding protein p300 [Homo sapiens]
Length = 2414
Score = 66.2 bits (160), Expect = 1e-10
Identities = 87/321 (27%), Positives = 107/321 (33%), Gaps = 70/321 (21%)
Query: 468 PLEAATGIPPGSILLNPHTGQPFVNPDGTPAIYNPPTSQQPLRSAMVGQSQQQPPQQQPS 527
P A P G P T QP P TP PP P A SQ + Q
Sbjct: 1850 PTPATPTTPTGQQPTTPQTPQPTSQPQPTPPNSMPP--YLPRTQAAGPVSQGKAAGQVTP 1907
Query: 528 PQPQQQVQPPQP-----------QMAGPLVTQRDDVATQFGQMTLSRQSSGETPEPPSGP 576
P P Q QPP P Q+ TQR Q Q + Q PP P
Sbjct: 1908 PTPPQTAQPPLPGPPPAAVEMAMQIQRAAETQRQMAHVQIFQRPIQHQM------PPMTP 1961
Query: 577 VYPSSLMPQPAQQPSYVIASTGQQLPTGGFSGSGPPISQQVLQPPPSPQGFVQQPPPAQM 636
+ P + P P T G SG L+P P G QQPP +Q
Sbjct: 1962 MAPMGMNPPPM---------------TRGPSGH--------LEPGMGPTGMQQQPPWSQ- 1997
Query: 637 PVYYYPSGQYPTSTTQQYRPMAPVQYNAQRSQQMPQAAQ----QAGYQPVLSG---QQGF 689
G Q P + AQ Q + A Q Q G P+ G QQ
Sbjct: 1998 ------GGLPQPQQLQSGMPRPAMMSVAQHGQPLNMAPQPGLGQVGISPLKPGTVSQQAL 2051
Query: 690 QGLIGVQQPP----QSQNVINNQQGTP------VQSVMVSYPTMSSYQVPMTQGSQGLPQ 739
Q L+ + P Q Q V++ P ++ Y + +P G G+PQ
Sbjct: 2052 QNLLRTLRSPSSPLQQQQVLSILHANPQLLAAFIKQRAAKYANSNPQPIP---GQPGMPQ 2108
Query: 740 -QSYQQPIMLPNQAGQGSLPA 759
Q QP +P Q G S PA
Sbjct: 2109 GQPGLQPPTMPGQQGVHSNPA 2129
Score = 53.1 bits (126), Expect = 1e-06
Identities = 71/253 (28%), Positives = 97/253 (38%), Gaps = 42/253 (16%)
Query: 455 GQVAPSSTSYILLPLEAAT-GIPPGSIL--LNPHTG----------QPFVNPDGTPAIYN 501
GQ P TS LP + G P ++ + P +G QP + P TP + +
Sbjct: 676 GQPQPGMTSNGPLPDPSMIRGSVPNQMMPRITPQSGLNQFGQMSMAQPPIVPRQTPPLQH 735
Query: 502 PPTSQQPLRSAMVGQSQQQPPQQQPSPQPQQQVQPPQPQMAGPLVTQRDDVATQFGQMTL 561
QP A+ P QQPS Q Q Q P G VT +A GQ +
Sbjct: 736 HGQLAQP--GALNPPMGYGPRMQQPSNQGQFLPQTQFPSQ-GMNVTNIP-LAPSSGQAPV 791
Query: 562 SRQSSGETPEPPSGPVYPSSL---------MPQPA---QQPSYVIASTGQQLPTGGFSGS 609
S+ + P + P+ P +PQPA PS V + T T G+
Sbjct: 792 SQAQMSSSSCPVNSPIMPPGSQGSHIHCPQLPQPALHQNSPSPVPSRTPTPHHTPPSIGA 851
Query: 610 GPPISQQVLQP-------PPSPQGFVQQPPPAQMPVYYYPSGQYPTSTTQQYRPMAPVQY 662
P + + P PP PQ PPP Q P P+ Q P QQ +P P
Sbjct: 852 QQPPATTIPAPVPTPPAMPPGPQSQALHPPPRQTPT--PPTTQLP----QQVQPSLPAAP 905
Query: 663 NAQRSQQMPQAAQ 675
+A + QQ P++ Q
Sbjct: 906 SADQPQQQPRSQQ 918
Score = 46.6 bits (109), Expect = 9e-05
Identities = 73/300 (24%), Positives = 107/300 (35%), Gaps = 45/300 (15%)
Query: 489 PFVNPDGTPAIYNPPTSQQPLRSAMVGQS----QQQPPQQQPS-PQPQQQVQPPQPQMAG 543
P + P + PP ++ P G QQQPP Q PQPQQ +Q P+ A
Sbjct: 1957 PPMTPMAPMGMNPPPMTRGPSGHLEPGMGPTGMQQQPPWSQGGLPQPQQ-LQSGMPRPAM 2015
Query: 544 PLVTQRD---DVATQ--FGQMTLSRQSSG-----------ETPEPPSGPVYPSSLMPQPA 587
V Q ++A Q GQ+ +S G T PS P+ ++
Sbjct: 2016 MSVAQHGQPLNMAPQPGLGQVGISPLKPGTVSQQALQNLLRTLRSPSSPLQQQQVLSILH 2075
Query: 588 QQPSYVIASTGQQLPTGGFSGSGPPISQQVLQPPPSPQGFVQQPPPAQMPVYYYPSGQYP 647
P + A Q+ ++ S P QP P G Q P Q P GQ
Sbjct: 2076 ANPQLLAAFIKQR--AAKYANSNP-------QPIPGQPGMPQGQPGLQPPTM---PGQQG 2123
Query: 648 TSTTQQYRPMAPVQYNAQRSQQMPQAAQQAGYQPVLSG---QQGFQGLIGVQQPPQSQNV 704
+ + M P+Q QR+ +PQ Q QP + G Q + P Q +++
Sbjct: 2124 VHSNPAMQNMNPMQAGVQRA-GLPQQQPQQQLQPPMGGMSPQAQQMNMNHNTMPSQFRDI 2182
Query: 705 INNQQGTPVQSVMVSYPTM-------SSYQVPMTQGSQGLPQQSYQQPIMLPNQAGQGSL 757
+ QQ Q + P + + +Q P G QQ Q + Q G +
Sbjct: 2183 LRRQQMMQQQQQQGAGPGIGPGMANHNQFQQPQGVGYPPQQQQRMQHHMQQMQQGNMGQI 2242
Score = 45.4 bits (106), Expect = 2e-04
Identities = 73/302 (24%), Positives = 108/302 (35%), Gaps = 60/302 (19%)
Query: 468 PLEAATGIPPGSILLNPHTGQPFVNPDGTPAIYNPPTSQQPLRSAMVGQSQQQPPQQQPS 527
P+ G+P G L P T G +++ P + Q + G + PQQ
Sbjct: 2099 PIPGQPGMPQGQPGLQPPT------MPGQQGVHSNP-AMQNMNPMQAGVQRAGLPQQ--- 2148
Query: 528 PQPQQQVQPPQPQM---AGPLVTQRDDVATQF------GQMTLSRQSSGETP-------- 570
QPQQQ+QPP M A + + + +QF QM +Q G P
Sbjct: 2149 -QPQQQLQPPMGGMSPQAQQMNMNHNTMPSQFRDILRRQQMMQQQQQQGAGPGIGPGMAN 2207
Query: 571 ----EPPSGPVYPSSLMPQPAQQPSYVIASTGQ-------QLPTGGFSGSGPPI---SQQ 616
+ P G YP PQ Q+ + + Q QLP + +G + Q+
Sbjct: 2208 HNQFQQPQGVGYP----PQQQQRMQHHMQQMQQGNMGQIGQLPQALGAEAGASLQAYQQR 2263
Query: 617 VLQP------PPSPQGFVQQPPPAQMPVYYYPSGQYPTSTTQQYRPMAPVQYNAQRSQQM 670
+LQ P+P Q P Q + Q P S + Q R PV +SQ
Sbjct: 2264 LLQQQMGSPVQPNPMSPQQHMLPNQAQSPHLQGQQIPNSLSNQVRSPQPVPSPRPQSQP- 2322
Query: 671 PQAAQQAGYQPVLS-------GQQGFQGLIGVQQPPQSQNVINNQQGTPVQSVMVSYPTM 723
P ++ QP S GL+ Q P Q + + S + S P M
Sbjct: 2323 PHSSPSPRMQPQPSPHHVSPQTSSPHPGLVAAQANPMEQGHFASPDQNSMLSQLASNPGM 2382
Query: 724 SS 725
++
Sbjct: 2383 AN 2384
Score = 44.3 bits (103), Expect = 5e-04
Identities = 50/162 (30%), Positives = 63/162 (38%), Gaps = 24/162 (14%)
Query: 484 PHTGQPFVNPDGTPAIYNPPTSQQPLRSAMVGQSQ--QQPPQQQPSP---QPQQQVQPPQ 538
PH P + PA P P QSQ PP+Q P+P Q QQVQP
Sbjct: 842 PHHTPPSIGAQQPPATTIPAPVPTPPAMPPGPQSQALHPPPRQTPTPPTTQLPQQVQPSL 901
Query: 539 PQMAGPLVTQRDDVATQFGQMTLSRQSSGETPEPPSGPVYPSSLMPQPAQQPSYVIASTG 598
P A P A Q Q S+QS+ + P+ P+ P PQPA S S
Sbjct: 902 P--AAP-------SADQPQQQPRSQQSTAASVPTPTAPLLP----PQPATPLSQPAVSIE 948
Query: 599 QQLPTGGFSGSGPPISQQVLQPPPSPQ------GFVQQPPPA 634
Q+ + S SQ + + PS + V QP PA
Sbjct: 949 GQVSNPPSTSSTEVNSQAIAEKQPSQEVKMEAKMEVDQPEPA 990
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 63.5 bits (153), Expect = 7e-10
Identities = 90/338 (26%), Positives = 121/338 (35%), Gaps = 51/338 (15%)
Query: 493 PDGTPAIYNPPTSQQPLRSAMVGQSQQQPPQQQP-------SPQPQQ-QVQPPQP--QMA 542
P+G I PP QQP + Q + P QQ S QP++ + QPP +
Sbjct: 203 PEG---IIKPPLQQQPPKPIPKQQGPGRDPLQQDGTPKSISSQQPEKIKSQPPGTGKPIQ 259
Query: 543 GPLVTQRDDVATQFGQMTLSRQSS-------GET-----PEPPSGPVYPSSLMPQPAQQP 590
GP T + D A Q SR + GE+ P P P+ + PAQQP
Sbjct: 260 GPTQTPQTDHAKLPLQRDASRPQTKQADIVRGESVKPSLPSPSKPPIQQPTPGKPPAQQP 319
Query: 591 SYVIASTGQQLPTGGFSGSGPPISQQ--VLQPPPSPQGFVQQP--------PPAQMPVYY 640
+ + G P SG P++QQ ++PP P G + P PPAQ
Sbjct: 320 GHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSE 379
Query: 641 YPSGQYPTSTTQQYRPMAPVQYNAQRSQQMPQAAQQAGYQPVLSGQQGFQG--------L 692
PS + P +P + AQ+ QQ G L+ Q G Q
Sbjct: 380 KPSSEQP-GPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTK 438
Query: 693 IGVQQPPQSQNVINNQQGTPVQSVMVSYPTMSSYQVPMTQGSQGLPQQSYQQPIMLPNQA 752
VQQP + + Q G S + PT Q+P P P P Q
Sbjct: 439 TPVQQPGPGK-IPAQQAGPGKTSAQQTGPTKPPSQLP----GPAKPPPQQPGPAKPPPQQ 493
Query: 753 GQGSLPATGMPVYCNVTPPTPQNNLRLIGPHCPSSTVP 790
+ P + P + PP Q P P ST P
Sbjct: 494 PGSAKPPSQQP--GSTKPPPQQPGPAKPSPQQPGSTKP 529
Score = 60.8 bits (146), Expect = 5e-09
Identities = 92/339 (27%), Positives = 125/339 (36%), Gaps = 74/339 (21%)
Query: 423 SRTHPPLQSTPLVSGVAAGSPGCVPYPENGIGGQVAPSSTSYILLPLEAATGI------P 476
S + PP+Q P A PG + ++ G P+ S + PL G P
Sbjct: 300 SPSKPPIQQ-PTPGKPPAQQPG---HEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQP 355
Query: 477 PGSILLNPHTGQPF--VNPDGTPAIYNPPTSQQPLRSAMVGQ-SQQQPPQQQPSPQ--PQ 531
PG+ QP P P+S+QP A+ + P QQP P P
Sbjct: 356 PGT---TKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPT 412
Query: 532 QQVQPPQP-----------QMAGPLVTQRDDVATQFGQMTLSRQSSGETPEPPSGPVYPS 580
QQV P+P + GP T G++ + G+T +GP P
Sbjct: 413 QQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGP--GKIPAQQAGPGKTSAQQTGPTKPP 470
Query: 581 SLMPQPAQQPSYVIASTGQQLPTGGFSGSGPPISQQVLQPPPSPQGFVQQPPPAQMPVYY 640
S +P PA+ P G P GS P SQQ P P QQP PA+
Sbjct: 471 SQLPGPAKPPPQ---QPGPAKPPPQQPGSAKPPSQQPGSTKPPP----QQPGPAK----- 518
Query: 641 YPSGQYPTSTTQQYRPMAPVQYNAQRSQQMPQAAQQAGYQPVLSGQQGFQGLIGVQQPPQ 700
PS Q P ST +P + +A+ S Q P A+ + Q
Sbjct: 519 -PSPQQPGST----KPPSQQPGSAKPSAQQPSPAKPSAQQ-------------------S 554
Query: 701 SQNVINNQQGTPVQSVMVSYPTMSSYQVPMTQGSQGLPQ 739
++ V G P+Q VS S+ Q P SQGLP+
Sbjct: 555 TKPVSQTGSGKPLQPPTVS---PSAKQPP----SQGLPK 586
Score = 39.3 bits (90), Expect = 0.015
Identities = 37/159 (23%), Positives = 61/159 (38%), Gaps = 13/159 (8%)
Query: 493 PDGTPAIYNPPTSQQPLRSAMVGQSQQQPPQQQPSPQPQQQVQPPQPQMAGPLVTQRDDV 552
P G+P++ + P +P + QPP P P P PP P P T
Sbjct: 2377 PSGSPSVSSLPAKPRPFFRSSSLDISAQPPPPPPPPPPPPPPPPPPPPPPLPPPTSPKPT 2436
Query: 553 ATQFGQMTLSRQSSGETPEPPSGPVYPSSLMPQPAQQPSYVIASTGQQLPTGGFSGSGPP 612
++T++ +P + P++ + + + V+ S G LP + PP
Sbjct: 2437 ILPKKKLTVA------SPVTTATPLFDA----VTTLETTAVLRSNG--LPVTRICTTAPP 2484
Query: 613 ISQQVLQPPPSPQGFVQQPPPAQMPVYYYP-SGQYPTST 650
PS F +P P++ P+ P Q PT+T
Sbjct: 2485 PVPPKPSSIPSGLVFTHRPEPSKPPIAPKPVIPQLPTTT 2523
Score = 38.1 bits (87), Expect = 0.033
Identities = 66/315 (20%), Positives = 105/315 (33%), Gaps = 47/315 (14%)
Query: 502 PPTSQQPLRSAMVGQSQQQPPQQQ--PSPQPQQQVQPPQPQMAGPLVTQRDDVATQFGQM 559
PP +QP +QPP+ P P ++ P Q P+ +
Sbjct: 704 PPLVKQPTLHGSPSAKAKQPPEADSLSKPAPPKEPSVPSEQDKAPVADDKPKQPKMVKPT 763
Query: 560 TLSRQSSGETPEPPSGPVYPSSLMPQPAQQPSYVIASTGQQLPTGGFSGSG---PPISQQ 616
T SS T +P PSS + A++ + T P+ F +G P +
Sbjct: 764 TDLVSSSSATTKPD----IPSSKVQSQAEEKTTPPLKTDSAKPSQSFPPTGEKVSPFDSK 819
Query: 617 VLQPPPSPQGFVQQPPPAQMPVYYYPSGQYPTSTTQQYRPMAPVQYNAQRSQQMPQAAQQ 676
+ P S + P P+S ++ + + PVQ + + + + +
Sbjct: 820 AIPRPASDSKIISHPG--------------PSSESKGQKQVDPVQKKEEPKKAQTKMSPK 865
Query: 677 AGYQPVLSGQQGFQGLIGVQQPPQSQNVINNQQG--TPVQSVMVSYPTMSSYQVPMTQGS 734
+P+ G G +P Q V QQ QS S S P +Q +
Sbjct: 866 PDAKPMPKGSPTPPG----PRPTAGQTVPTPQQSPKPQEQSRRFSLNLGSITDAPKSQPT 921
Query: 735 Q----------GLPQQSYQQPIMLPNQAGQ---GSLPATGMPVY---CNVTPPTPQNNLR 778
G + Q L + AGQ S G P+ PPT Q +
Sbjct: 922 TPQETVTGKLFGFGASIFSQASNLISTAGQPGPHSQSGPGAPMKQAPAPSQPPTSQGPPK 981
Query: 779 LIG--PHCPSSTVPV 791
G P P+ ++PV
Sbjct: 982 STGQAPPAPAKSIPV 996
Score = 32.0 bits (71), Expect = 2.4
Identities = 28/91 (30%), Positives = 37/91 (40%), Gaps = 9/91 (9%)
Query: 558 QMTLSRQSSGETPEPPSGPVYPSSLMPQPAQQPSYVIASTGQQLPTGGFSGSGPPISQQV 617
Q++ + +SGET G P+S +P + S + A P F S IS Q
Sbjct: 2355 QLSTTYFTSGET----FGQEKPASQLPSGSPSVSSLPAK-----PRPFFRSSSLDISAQP 2405
Query: 618 LQPPPSPQGFVQQPPPAQMPVYYYPSGQYPT 648
PPP P PPP P P+ PT
Sbjct: 2406 PPPPPPPPPPPPPPPPPPPPPLPPPTSPKPT 2436
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 63.5 bits (153), Expect = 7e-10
Identities = 90/338 (26%), Positives = 121/338 (35%), Gaps = 51/338 (15%)
Query: 493 PDGTPAIYNPPTSQQPLRSAMVGQSQQQPPQQQP-------SPQPQQ-QVQPPQP--QMA 542
P+G I PP QQP + Q + P QQ S QP++ + QPP +
Sbjct: 203 PEG---IIKPPLQQQPPKPIPKQQGPGRDPLQQDGTPKSISSQQPEKIKSQPPGTGKPIQ 259
Query: 543 GPLVTQRDDVATQFGQMTLSRQSS-------GET-----PEPPSGPVYPSSLMPQPAQQP 590
GP T + D A Q SR + GE+ P P P+ + PAQQP
Sbjct: 260 GPTQTPQTDHAKLPLQRDASRPQTKQADIVRGESVKPSLPSPSKPPIQQPTPGKPPAQQP 319
Query: 591 SYVIASTGQQLPTGGFSGSGPPISQQ--VLQPPPSPQGFVQQP--------PPAQMPVYY 640
+ + G P SG P++QQ ++PP P G + P PPAQ
Sbjct: 320 GHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSE 379
Query: 641 YPSGQYPTSTTQQYRPMAPVQYNAQRSQQMPQAAQQAGYQPVLSGQQGFQG--------L 692
PS + P +P + AQ+ QQ G L+ Q G Q
Sbjct: 380 KPSSEQP-GPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTK 438
Query: 693 IGVQQPPQSQNVINNQQGTPVQSVMVSYPTMSSYQVPMTQGSQGLPQQSYQQPIMLPNQA 752
VQQP + + Q G S + PT Q+P P P P Q
Sbjct: 439 TPVQQPGPGK-IPAQQAGPGKTSAQQTGPTKPPSQLP----GPAKPPPQQPGPAKPPPQQ 493
Query: 753 GQGSLPATGMPVYCNVTPPTPQNNLRLIGPHCPSSTVP 790
+ P + P + PP Q P P ST P
Sbjct: 494 PGSAKPPSQQP--GSTKPPPQQPGPAKPSPQQPGSTKP 529
Score = 60.8 bits (146), Expect = 5e-09
Identities = 92/339 (27%), Positives = 125/339 (36%), Gaps = 74/339 (21%)
Query: 423 SRTHPPLQSTPLVSGVAAGSPGCVPYPENGIGGQVAPSSTSYILLPLEAATGI------P 476
S + PP+Q P A PG + ++ G P+ S + PL G P
Sbjct: 300 SPSKPPIQQ-PTPGKPPAQQPG---HEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQP 355
Query: 477 PGSILLNPHTGQPF--VNPDGTPAIYNPPTSQQPLRSAMVGQ-SQQQPPQQQPSPQ--PQ 531
PG+ QP P P+S+QP A+ + P QQP P P
Sbjct: 356 PGT---TKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPT 412
Query: 532 QQVQPPQP-----------QMAGPLVTQRDDVATQFGQMTLSRQSSGETPEPPSGPVYPS 580
QQV P+P + GP T G++ + G+T +GP P
Sbjct: 413 QQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGP--GKIPAQQAGPGKTSAQQTGPTKPP 470
Query: 581 SLMPQPAQQPSYVIASTGQQLPTGGFSGSGPPISQQVLQPPPSPQGFVQQPPPAQMPVYY 640
S +P PA+ P G P GS P SQQ P P QQP PA+
Sbjct: 471 SQLPGPAKPPPQ---QPGPAKPPPQQPGSAKPPSQQPGSTKPPP----QQPGPAK----- 518
Query: 641 YPSGQYPTSTTQQYRPMAPVQYNAQRSQQMPQAAQQAGYQPVLSGQQGFQGLIGVQQPPQ 700
PS Q P ST +P + +A+ S Q P A+ + Q
Sbjct: 519 -PSPQQPGST----KPPSQQPGSAKPSAQQPSPAKPSAQQ-------------------S 554
Query: 701 SQNVINNQQGTPVQSVMVSYPTMSSYQVPMTQGSQGLPQ 739
++ V G P+Q VS S+ Q P SQGLP+
Sbjct: 555 TKPVSQTGSGKPLQPPTVS---PSAKQPP----SQGLPK 586
Score = 39.3 bits (90), Expect = 0.015
Identities = 37/159 (23%), Positives = 61/159 (38%), Gaps = 13/159 (8%)
Query: 493 PDGTPAIYNPPTSQQPLRSAMVGQSQQQPPQQQPSPQPQQQVQPPQPQMAGPLVTQRDDV 552
P G+P++ + P +P + QPP P P P PP P P T
Sbjct: 2377 PSGSPSVSSLPAKPRPFFRSSSLDISAQPPPPPPPPPPPPPPPPPPPPPPLPPPTSPKPT 2436
Query: 553 ATQFGQMTLSRQSSGETPEPPSGPVYPSSLMPQPAQQPSYVIASTGQQLPTGGFSGSGPP 612
++T++ +P + P++ + + + V+ S G LP + PP
Sbjct: 2437 ILPKKKLTVA------SPVTTATPLFDA----VTTLETTAVLRSNG--LPVTRICTTAPP 2484
Query: 613 ISQQVLQPPPSPQGFVQQPPPAQMPVYYYP-SGQYPTST 650
PS F +P P++ P+ P Q PT+T
Sbjct: 2485 PVPPKPSSIPSGLVFTHRPEPSKPPIAPKPVIPQLPTTT 2523
Score = 38.1 bits (87), Expect = 0.033
Identities = 66/315 (20%), Positives = 105/315 (33%), Gaps = 47/315 (14%)
Query: 502 PPTSQQPLRSAMVGQSQQQPPQQQ--PSPQPQQQVQPPQPQMAGPLVTQRDDVATQFGQM 559
PP +QP +QPP+ P P ++ P Q P+ +
Sbjct: 704 PPLVKQPTLHGSPSAKAKQPPEADSLSKPAPPKEPSVPSEQDKAPVADDKPKQPKMVKPT 763
Query: 560 TLSRQSSGETPEPPSGPVYPSSLMPQPAQQPSYVIASTGQQLPTGGFSGSG---PPISQQ 616
T SS T +P PSS + A++ + T P+ F +G P +
Sbjct: 764 TDLVSSSSATTKPD----IPSSKVQSQAEEKTTPPLKTDSAKPSQSFPPTGEKVSPFDSK 819
Query: 617 VLQPPPSPQGFVQQPPPAQMPVYYYPSGQYPTSTTQQYRPMAPVQYNAQRSQQMPQAAQQ 676
+ P S + P P+S ++ + + PVQ + + + + +
Sbjct: 820 AIPRPASDSKIISHPG--------------PSSESKGQKQVDPVQKKEEPKKAQTKMSPK 865
Query: 677 AGYQPVLSGQQGFQGLIGVQQPPQSQNVINNQQG--TPVQSVMVSYPTMSSYQVPMTQGS 734
+P+ G G +P Q V QQ QS S S P +Q +
Sbjct: 866 PDAKPMPKGSPTPPG----PRPTAGQTVPTPQQSPKPQEQSRRFSLNLGSITDAPKSQPT 921
Query: 735 Q----------GLPQQSYQQPIMLPNQAGQ---GSLPATGMPVY---CNVTPPTPQNNLR 778
G + Q L + AGQ S G P+ PPT Q +
Sbjct: 922 TPQETVTGKLFGFGASIFSQASNLISTAGQPGPHSQSGPGAPMKQAPAPSQPPTSQGPPK 981
Query: 779 LIG--PHCPSSTVPV 791
G P P+ ++PV
Sbjct: 982 STGQAPPAPAKSIPV 996
Score = 32.0 bits (71), Expect = 2.4
Identities = 28/91 (30%), Positives = 37/91 (40%), Gaps = 9/91 (9%)
Query: 558 QMTLSRQSSGETPEPPSGPVYPSSLMPQPAQQPSYVIASTGQQLPTGGFSGSGPPISQQV 617
Q++ + +SGET G P+S +P + S + A P F S IS Q
Sbjct: 2355 QLSTTYFTSGET----FGQEKPASQLPSGSPSVSSLPAK-----PRPFFRSSSLDISAQP 2405
Query: 618 LQPPPSPQGFVQQPPPAQMPVYYYPSGQYPT 648
PPP P PPP P P+ PT
Sbjct: 2406 PPPPPPPPPPPPPPPPPPPPPLPPPTSPKPT 2436
>gi|56549696 E1A binding protein p400 [Homo sapiens]
Length = 3122
Score = 62.8 bits (151), Expect = 1e-09
Identities = 84/331 (25%), Positives = 111/331 (33%), Gaps = 29/331 (8%)
Query: 488 QPFVNPDGTPAIYNPPTSQQP-----LRSAMVGQSQQQPPQQQPSPQPQQQVQP---PQP 539
QP V P PP QQP A Q PP QP PQPQ Q QP P
Sbjct: 2500 QPAVAQPPPPQPQPPPPPQQPPPPLPQPQAAGSQPPAGPPAVQPQPQPQPQTQPQPVQAP 2559
Query: 540 QMAGPLVTQRDDVATQFGQMTLSRQSSGETPEPPSGPVYPSSLMPQPAQQPSYVIASTGQ 599
A P +T A G + S + SG V +++ PA +
Sbjct: 2560 AKAQPAITTGGSAAVLAGTIKTSVTGTSMPTGAVSGNVIVNTIAGVPAATFQSINKRLAS 2619
Query: 600 QLPTGGFSGSGPPISQQVL--QPPPSPQGFVQQPPPAQMPVYYYPSGQYPTSTTQQ---Y 654
+ G + G QV+ QPPP G P + + + TS T
Sbjct: 2620 PVAPGALTTPGGSAPAQVVHTQPPPRAVGSPATATPDLVSMATTQGVRAVTSVTASAVVT 2679
Query: 655 RPMAPVQYNAQRSQQMPQAAQQAGYQPVLSGQ-------QGFQGLIGVQQPPQSQNVINN 707
+ PVQ A+ +PQ +Q G Q L G+ Q + QQ Q Q
Sbjct: 2680 TNLTPVQTPAR--SLVPQVSQATGVQ--LPGKTITPAHFQLLRQQQQQQQQQQQQQQQQQ 2735
Query: 708 QQGTPVQSVMVSYPTMSSYQVPMTQGSQGLPQQSYQQPIMLPN-----QAGQGSLPATGM 762
QQ Q T S QVP QG P Q + P Q + +P
Sbjct: 2736 QQQQQQQQQQQQTTTTSQVQVPQIQGQAQSPAQIKAVGKLTPEHLIKMQKQKLQMPPQPP 2795
Query: 763 PVYCNVTPPTPQNNLRLIGPHCPSSTVPVMS 793
P PP P +++ P P ++
Sbjct: 2796 PPQAQSAPPQPTAQVQVQTSQPPQQQSPQLT 2826
Score = 45.8 bits (107), Expect = 2e-04
Identities = 61/264 (23%), Positives = 81/264 (30%), Gaps = 45/264 (17%)
Query: 502 PPTSQQPLRSAMVGQSQQQPPQQQPSPQPQQQVQPPQPQMAGPLVTQRDDVATQFGQMTL 561
PPT Q + QQ P P Q + P PQ+ G L
Sbjct: 517 PPTPQAAQLAGQRQSQQQYDPSTGPPVQNAASLHTPLPQLPGRL---------------- 560
Query: 562 SRQSSGETPEPPSG-PVYPSSLMPQPAQQPSYVIASTGQQLPTGGFSGS----GPPISQQ 616
PP+G P S Q AQQP V A T Q+P + PP SQ
Sbjct: 561 ----------PPAGVPTAALSSALQFAQQPQVVEAQTQLQIPVKTQQPNVPIPAPPSSQL 610
Query: 617 VLQPPPSPQGFVQQPPPAQMPVYYYPSGQYPTSTTQQYRPMAPVQ------YNAQRSQQM 670
+ P Q + P P ++ V P P+ P + S
Sbjct: 611 PIPPSQPAQLALHVPTPGKVQVQASQLSSLPQMVASTRLPVDPAPPCPRPLPTSSTSSLA 670
Query: 671 PQAAQQAGYQPVLSGQQGFQGLIGVQQPPQSQNVINNQQGTPVQSVMVSYPTMSSYQVPM 730
P + G P S V +P + N + + V+ S PT
Sbjct: 671 PVSGSGPGPSPARSSP--------VNRPSSATNKALSPVTSRTPGVVASAPTKPQSPAQN 722
Query: 731 TQGSQGLPQQSYQQPIMLPNQAGQ 754
SQ Q + + I L NQ Q
Sbjct: 723 ATSSQDSSQDTLTEQITLENQVHQ 746
Score = 34.7 bits (78), Expect = 0.36
Identities = 74/306 (24%), Positives = 101/306 (33%), Gaps = 61/306 (19%)
Query: 516 QSQQQPPQQQPS---PQPQQQV-----QPPQ---PQMA-------GPLVTQRDDVATQFG 557
Q QPP Q PQP QV QPPQ PQ+ G L+T Q
Sbjct: 2789 QMPPQPPPPQAQSAPPQPTAQVQVQTSQPPQQQSPQLTTVTAPRPGALLTGTTVANLQVA 2848
Query: 558 QM----TLSRQSSGETPEPPSGPVYPSSLMPQPAQQPSYVIASTGQQLPTGGFSGSGPPI 613
++ T Q+ G+ P + P P+ V++S G +G I
Sbjct: 2849 RLTRVPTSQLQAQGQMQTQAPQPAQVALAKPPVVSVPAAVVSSPGVTTLPMNVAGISVAI 2908
Query: 614 SQQ--------VLQPP------PSPQGFVQQPPPAQMPVYYYPSGQYPTSTTQQYR---P 656
Q V QP Q VQQ Q P+ T QQ
Sbjct: 2909 GQPQKAAGQTVVAQPVHMQQLLKLKQQAVQQQKAIQPQAAQGPAAVQQKITAQQITTPGA 2968
Query: 657 MAPVQYNAQRSQQMPQAAQQAGYQPVLSGQQGFQGLIGVQQPPQ----------SQNVIN 706
V Y AQ + + L+G Q Q I V + PQ Q V +
Sbjct: 2969 QQKVAYAAQPALKTQFLTTPISQAQKLAGAQQVQTQIQVAKLPQVVQQQTPVASIQQVAS 3028
Query: 707 NQQGTPVQSVMVSYPTMSSYQVPM----TQGSQGLPQQSYQQ--------PIMLPNQAGQ 754
Q Q+V ++ T + QV M T +Q + Q+ QQ P+ P
Sbjct: 3029 ASQQASPQTVALTQATAAGQQVQMIPAVTATAQVVQQKLIQQQVVTTASAPLQTPGAPNP 3088
Query: 755 GSLPAT 760
+PA+
Sbjct: 3089 AQVPAS 3094
>gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens]
Length = 788
Score = 61.6 bits (148), Expect = 3e-09
Identities = 97/383 (25%), Positives = 139/383 (36%), Gaps = 48/383 (12%)
Query: 418 SSGSLSRTHPPLQSTPLVSGVAAGSPGCVPYPENGIGGQVAP-SSTSYILLPLEAATGIP 476
S S+S LQS L G AAG+ G + P G G + S + P+ + P
Sbjct: 74 SQASVSDPMNALQS--LTGGPAAGAAG-IGMPPRGPGQSLGGMGSLGAMGQPMSLSGQPP 130
Query: 477 PGSILLNPHTGQPFVNPDGTPAIYNPPTSQQPLRSAMVGQSQQQPPQQQPSPQPQQQVQP 536
PG+ + PH+ + P T Q + A+ Q QQQ QQQ QQQ Q
Sbjct: 131 PGTSGMAPHSM-------AVVSTATPQTQLQLQQVALQQQQQQQQFQQQQQAALQQQQQQ 183
Query: 537 PQPQMAGPLVTQRDDVATQFGQMTLSRQSSGETPEPPSGPVYPSSLMPQPAQQPSYVIAS 596
Q Q Q+ + QF + +Q + + + Q QQ +
Sbjct: 184 QQQQQ---FQAQQSAMQQQFQAVVQQQQQLQQQQQQQQHLIKLHHQNQQQIQQQQQQLQR 240
Query: 597 TGQ-QLPTGGFSGSGPPISQQVLQPPPSPQGFVQQPPPAQMPVYYYPSGQYPTSTTQQYR 655
Q QL QQ Q Q +Q PP Q P P + QQ +
Sbjct: 241 IAQLQLQQQ---------QQQQQQQQQQQQQALQAQPPIQQPPMQQPQPPPSQALPQQLQ 291
Query: 656 PMAPVQYNAQRSQQMPQAAQQAGYQPVLSGQQGFQGLIGVQQPPQSQN--VINNQQGTPV 713
M ++ Q Q PQ Q PV Q Q PPQSQ +++ Q P
Sbjct: 292 QM----HHTQHHQPPPQPQQ----PPVAQNQPS-------QLPPQSQTQPLVSQAQALPG 336
Query: 714 QSVMVSYPTMSSYQVPM-TQGSQGLPQQSYQQPIMLPNQAGQGSLPATGMPVYCNVTPPT 772
Q ++ + P + + PM Q PQ QQ + QA Q P M +T
Sbjct: 337 Q-MLYTQPPLKFVRAPMVVQQPPVQPQVQQQQTAVQTAQAAQMVAPGVQM-----ITEAL 390
Query: 773 PQNNLRLIGPHCPSSTVPVMSAS 795
Q + + P++ V + +S
Sbjct: 391 AQGGMHIRARFPPTTAVSAIPSS 413
Score = 57.8 bits (138), Expect = 4e-08
Identities = 84/306 (27%), Positives = 109/306 (35%), Gaps = 31/306 (10%)
Query: 506 QQPLRSAMVGQSQQQPPQQQPSPQPQQ---QVQPP--QPQMAGPLVTQRDDVATQFGQM- 559
QQ L+ Q QQQ QQQ Q QQ Q QPP QP M P + Q QM
Sbjct: 235 QQQLQRIAQLQLQQQQQQQQQQQQQQQQALQAQPPIQQPPMQQPQPPPSQALPQQLQQMH 294
Query: 560 -TLSRQSSGETPEPPSGPVYPSSLMPQPAQQPSYVIASTGQQLPTGGFSGSGPPIS---- 614
T Q + +PP PS L PQ QP + S Q LP G + PP+
Sbjct: 295 HTQHHQPPPQPQQPPVAQNQPSQLPPQSQTQP---LVSQAQALP-GQMLYTQPPLKFVRA 350
Query: 615 -QQVLQPPPSPQGFVQQP--PPAQMPVYYYPSGQYPTSTTQQYRPMAPVQYNAQRS-QQM 670
V QPP PQ QQ AQ P Q T Q ++ + +
Sbjct: 351 PMVVQQPPVQPQVQQQQTAVQTAQAAQMVAPGVQMITEALAQGGMHIRARFPPTTAVSAI 410
Query: 671 PQAAQQAGYQPVLSGQQGFQGLIGVQQPPQSQNVINNQQGTPVQSVMVSYPTMSSYQVPM 730
P ++ G QP+ Q ++ P Q + P S P+ S +
Sbjct: 411 PSSSIPLGRQPMAQVSQSSLPMLSSPSPGQQVQTPQSMPPPPQPSPQPGQPS-SQPNSNV 469
Query: 731 TQGSQGLPQQSYQQPIMLPNQAGQGSLPATG-MPVYCNVTPPTPQNNLRLIGPHCPSSTV 789
+ G P P P+Q+ P T P +V P P N P PSS +
Sbjct: 470 SSGPAPSPSSFLPSPSPQPSQS-----PVTARTPQNFSVPSPGPLNT-----PVNPSSVM 519
Query: 790 PVMSAS 795
+S
Sbjct: 520 SPAGSS 525
Score = 46.2 bits (108), Expect = 1e-04
Identities = 45/136 (33%), Positives = 52/136 (38%), Gaps = 9/136 (6%)
Query: 496 TPAIYNPPTSQQPLRSAMVGQSQQQPPQQQPSPQPQQQVQPPQPQMAGPLVTQRDDVATQ 555
T A+ P+S PL + Q Q SP P QQVQ PQ P Q Q
Sbjct: 404 TTAVSAIPSSSIPLGRQPMAQVSQSSLPMLSSPSPGQQVQTPQSMPPPP---QPSPQPGQ 460
Query: 556 FGQMTLSRQSSGETPEPPSGPVYPSSLMPQPAQQPSYVIASTGQQLPTGGFSGSGPPIS- 614
S SSG P P S PS PQP+Q P V A T Q P++
Sbjct: 461 PSSQPNSNVSSGPAPSPSSFLPSPS---PQPSQSP--VTARTPQNFSVPSPGPLNTPVNP 515
Query: 615 QQVLQPPPSPQGFVQQ 630
V+ P S Q QQ
Sbjct: 516 SSVMSPAGSSQAEEQQ 531
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 61.2 bits (147), Expect = 4e-09
Identities = 70/257 (27%), Positives = 90/257 (35%), Gaps = 35/257 (13%)
Query: 476 PPGSILLNPHTGQPFVNPDGT---PAIYNPPTSQQPLRSAMVGQSQQQPPQQQPSPQPQ- 531
PP + LN + G P + P I PP QQ + QQPP QP P PQ
Sbjct: 34 PPPGMGLNQNRGPMGPGPGQSGPKPPIPPPPPHQQQQQPPPQQPPPQQPPPHQPPPHPQP 93
Query: 532 ---QQVQPPQPQMAGPLVTQRDDVATQFGQMTLSRQSSGETPEPPSGPVYPSSLMPQPAQ 588
QQ PP + P+V Q A G + S+ P SG S P P
Sbjct: 94 HQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTP 153
Query: 589 QPSYVIASTGQQLPTGGFSGSGPPISQQVLQPPPSP-------QGFVQQPPP-----AQM 636
P+ A G PT SG P Q PPP P G Q P P +M
Sbjct: 154 PPAVTSAPPGAPPPTPPSSGV-PTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKM 212
Query: 637 PVYYYPSGQYPTSTTQQYRPMAPVQ--------------YNAQRSQQMPQAAQQAGYQPV 682
P P G P +T P P + Y+ Q Q P +
Sbjct: 213 PGGPKPGGG-PGLSTPGGHPKPPHRGGGEPRGGRQHHPPYHQQHHQGPPPGGPGGRSEEK 271
Query: 683 LSGQQGFQGLIGVQQPP 699
+S +GF+ + + + P
Sbjct: 272 ISDSEGFKANLSLLRRP 288
Score = 45.8 bits (107), Expect = 2e-04
Identities = 54/196 (27%), Positives = 64/196 (32%), Gaps = 51/196 (26%)
Query: 598 GQQLPTGGFSGSGPPISQQVLQPPPSPQGFVQQPPPAQMPVYYYPSGQYPTSTTQQYRPM 657
G P G SG PPI PPP P QQPPP Q P QQ P
Sbjct: 45 GPMGPGPGQSGPKPPI------PPPPPHQQQQQPPPQQPP-------------PQQPPPH 85
Query: 658 APVQYNAQRSQQMPQAAQQAGYQPVLSGQQGFQGLIGVQQPPQSQNVINNQQGTPVQSVM 717
P + QQ P Q +PV++ QG +
Sbjct: 86 QPPPHPQPHQQQQPPPPPQDSSKPVVA------------------------QGPGPAPGV 121
Query: 718 VSYPTMSSYQVPMTQGSQGLPQQSYQQPIMLPNQAGQGSLPATGMPVYCNVTPPT---PQ 774
S P SS P T + G P S P P A + P P TPP+ P
Sbjct: 122 GSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPP-----TPPSSGVPT 176
Query: 775 NNLRLIGPHCPSSTVP 790
+ GP P + VP
Sbjct: 177 TPPQAGGPPPPPAAVP 192
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 60.8 bits (146), Expect = 5e-09
Identities = 72/273 (26%), Positives = 99/273 (36%), Gaps = 31/273 (11%)
Query: 477 PGSILLNPHTGQPFVNPDGTPAIYNPPTSQQPLRSAMVGQSQQQPPQQQPSPQPQQQVQP 536
PG++ L T Q P G PA PP P + Q Q P QQ+P PQ QQ +
Sbjct: 439 PGALPLGRQTSQ---QPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQRPPPQGQQHLSG 495
Query: 537 PQPQMAGPL-------VTQRDDVATQF-----GQMTLSRQSSGETPEPPSGPVYPSSLMP 584
P PL + A+Q GQ SR +G PP+ P+S P
Sbjct: 496 LGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARP-PASPSP 554
Query: 585 QPAQQPSYVIASTGQQLPTGGFSGSGPPISQQVLQPPPSPQGFVQQPPPAQMPVYYYPSG 644
Q P T P + PP QQ PP P G P + P
Sbjct: 555 QRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPG---PAGPTRQASQAGPVP 611
Query: 645 QYPTSTTQQYRPMAP-------VQYNAQRSQQMPQAAQQAG---YQPVLSGQQGFQGLIG 694
+ TTQQ RP P Q + SQ +P A A P L+ Q
Sbjct: 612 RTGPPTTQQPRPSGPGPAGRPKPQLAQKPSQDVPPPATAAAGGPPHPQLNKSQSLTNAFN 671
Query: 695 VQQ--PPQSQNVINNQQGTPVQSVMVSYPTMSS 725
+ + PP+ + + ++S+ S+ ++ S
Sbjct: 672 LPEPAPPRPSLSQDEVKAETIRSLRKSFASLFS 704
Score = 52.8 bits (125), Expect = 1e-06
Identities = 78/301 (25%), Positives = 99/301 (32%), Gaps = 41/301 (13%)
Query: 390 LTRGDSTSSTRSTGKLSKAGSESSSSAGSSGSLSRTHPPLQSTPLVSGVAAGSPGCVPYP 449
L R ++ G + S + G S PP Q P G PG P
Sbjct: 418 LPRQRQRDASPGRGSHGQTPSPGALPLGRQTSQQPAGPPAQQRPPPQG-GPPQPGPGPQR 476
Query: 450 ENGIGGQVAPSSTSYILLPLEAATGIPPGSILLNPHTGQPFVNPDGTPAIYNPPTSQQPL 509
+ Q P L L G P L +P + P + PPT Q
Sbjct: 477 QGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSA-----PQQPASQAAPPTQGQGR 531
Query: 510 RSAMVGQSQQQPPQQQP--SPQPQQQVQPPQPQMAGPLVTQRDDVATQFGQMTLSRQSSG 567
+S V PP +P SP PQ+Q PPQ +RQ+S
Sbjct: 532 QSRPVAGGPGAPPAARPPASPSPQRQAGPPQ----------------------ATRQTSV 569
Query: 568 ETPEPP--SGPVYPSSLMPQPAQQPSYVIASTGQQLPTGGFSGSGPPISQQVLQPPPSPQ 625
P PP SG P Q+P T Q G +GPP +Q QP PS
Sbjct: 570 SGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQAGPVPRTGPPTTQ---QPRPSGP 626
Query: 626 GFVQQPPP--AQMPVYYYPSGQYPTSTTQQYRPMAPVQYNAQRSQQMPQAAQQAGYQPVL 683
G +P P AQ P P P +T P P +Q + A +P L
Sbjct: 627 GPAGRPKPQLAQKPSQDVP----PPATAAAGGPPHPQLNKSQSLTNAFNLPEPAPPRPSL 682
Query: 684 S 684
S
Sbjct: 683 S 683
Score = 47.8 bits (112), Expect = 4e-05
Identities = 68/222 (30%), Positives = 79/222 (35%), Gaps = 36/222 (16%)
Query: 563 RQSSGETPEPPSGPVYPSSLMPQPAQQPSYVIAST------GQQLPTGGFSGSGPPISQQ 616
R S G+TP P + P L Q +QQP+ A G P G GPP+ Q+
Sbjct: 430 RGSHGQTPSPGALP-----LGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQR 484
Query: 617 VLQPPPSPQGFVQQPPPAQMPV-YYYPSGQYPTSTTQQYRPMAPVQYNAQRSQQMPQAAQ 675
PP Q PPA P+ PS PTS QQ A Q Q P A
Sbjct: 485 --PPPQGQQHLSGLGPPAGSPLPQRLPS---PTSAPQQPASQAAPPTQGQGRQSRPVA-- 537
Query: 676 QAGYQPVLSGQQGFQGLIGVQQPPQS---QNVINNQQGTPVQSVMVSYPTMSSYQVPMTQ 732
G G +PP S Q Q T SV P +S P Q
Sbjct: 538 ------------GGPGAPPAARPPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQ 585
Query: 733 GSQGLPQQSYQQPIMLPNQAGQ-GSLPATGMPVYCNVTPPTP 773
QG PQ+ P QA Q G +P TG P P P
Sbjct: 586 QRQGPPQKP-PGPAGPTRQASQAGPVPRTGPPTTQQPRPSGP 626
Score = 44.7 bits (104), Expect = 4e-04
Identities = 56/197 (28%), Positives = 67/197 (34%), Gaps = 21/197 (10%)
Query: 502 PPTSQQPLRSAMVGQSQQQPPQQQPSPQPQQQVQPPQPQMAGPLVTQRDDVATQFGQMTL 561
P PL Q P QQ+P PQ P PQ GP + QR GQ L
Sbjct: 437 PSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQRPPPQ---GQQHL 493
Query: 562 SRQSSGETPEPPSGPVYPSSLMPQPAQQPSYVIASTGQQ-LPTGGFSGSGPPISQQVLQP 620
S P P+S QPA Q + G+Q P G G+ P +P
Sbjct: 494 SGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPP-----AARP 548
Query: 621 PPSPQGFVQQPPP-------AQMPVYYYPSGQYPTSTTQQ---YRPMAPVQYNAQRSQ-- 668
P SP Q PP P SG P +Q +P P Q SQ
Sbjct: 549 PASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQAG 608
Query: 669 QMPQAAQQAGYQPVLSG 685
+P+ QP SG
Sbjct: 609 PVPRTGPPTTQQPRPSG 625
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 60.1 bits (144), Expect = 8e-09
Identities = 62/212 (29%), Positives = 77/212 (36%), Gaps = 23/212 (10%)
Query: 477 PGSILLNPHTGQPFVNPDGTPAIYNPPTSQQPLRSAMVGQSQQQPPQQQPSPQPQQQVQP 536
PG++ L T Q P G PA PP P + Q Q P QQ+P PQ QQ +
Sbjct: 439 PGALPLGRQTSQ---QPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQRPPPQGQQHLSG 495
Query: 537 PQPQMAGPL-------VTQRDDVATQF-----GQMTLSRQSSGETPEPPSGPVYPSSLMP 584
P PL + A+Q GQ SR +G PP+ P+S P
Sbjct: 496 LGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARP-PASPSP 554
Query: 585 QPAQQPSYVIASTGQQLPTGGFSGSGPPISQQVLQPPPSPQGFVQQPPPAQMPVYYYPSG 644
Q P T P + PP QQ PP P G P + P
Sbjct: 555 QRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPG---PAGPTRQASQAGPVP 611
Query: 645 QYPTSTTQQYRPMAPVQYNAQRSQQMPQAAQQ 676
+ TTQQ RP P + PQ AQ+
Sbjct: 612 RTGPPTTQQPRPSGP----GPAGRPKPQLAQK 639
Score = 53.9 bits (128), Expect = 6e-07
Identities = 77/288 (26%), Positives = 96/288 (33%), Gaps = 42/288 (14%)
Query: 390 LTRGDSTSSTRSTGKLSKAGSESSSSAGSSGSLSRTHPPLQSTPLVSGVAAGSPGCVPYP 449
L R ++ G + S + G S PP Q P G PG P
Sbjct: 418 LPRQRQRDASPGRGSHGQTPSPGALPLGRQTSQQPAGPPAQQRPPPQG-GPPQPGPGPQR 476
Query: 450 ENGIGGQVAPSSTSYILLPLEAATGIPPGSILLNPHTGQPFVNPDGTPAIYNPPTSQQPL 509
+ Q P L L G P L +P + P + PPT Q
Sbjct: 477 QGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSA-----PQQPASQAAPPTQGQGR 531
Query: 510 RSAMVGQSQQQPPQQQP--SPQPQQQVQPPQPQMAGPLVTQRDDVATQFGQMTLSRQSSG 567
+S V PP +P SP PQ+Q PPQ +RQ+S
Sbjct: 532 QSRPVAGGPGAPPAARPPASPSPQRQAGPPQ----------------------ATRQTSV 569
Query: 568 ETPEPP--SGPVYPSSLMPQPAQQPSYVIASTGQQLPTGGFSGSGPPISQQVLQPPPSPQ 625
P PP SG P Q+P T Q G +GPP +Q QP PS
Sbjct: 570 SGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQAGPVPRTGPPTTQ---QPRPSGP 626
Query: 626 GFVQQPPP--AQMPVYYYPSGQYPTSTTQQYRPMAPVQYNAQRSQQMP 671
G +P P AQ P P P +T P P Q A +Q P
Sbjct: 627 GPAGRPKPQLAQKPSQDVP----PPATAAAGGPPHP-QLKASPAQAQP 669
Score = 47.8 bits (112), Expect = 4e-05
Identities = 68/222 (30%), Positives = 79/222 (35%), Gaps = 36/222 (16%)
Query: 563 RQSSGETPEPPSGPVYPSSLMPQPAQQPSYVIAST------GQQLPTGGFSGSGPPISQQ 616
R S G+TP P + P L Q +QQP+ A G P G GPP+ Q+
Sbjct: 430 RGSHGQTPSPGALP-----LGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQR 484
Query: 617 VLQPPPSPQGFVQQPPPAQMPV-YYYPSGQYPTSTTQQYRPMAPVQYNAQRSQQMPQAAQ 675
PP Q PPA P+ PS PTS QQ A Q Q P A
Sbjct: 485 --PPPQGQQHLSGLGPPAGSPLPQRLPS---PTSAPQQPASQAAPPTQGQGRQSRPVA-- 537
Query: 676 QAGYQPVLSGQQGFQGLIGVQQPPQS---QNVINNQQGTPVQSVMVSYPTMSSYQVPMTQ 732
G G +PP S Q Q T SV P +S P Q
Sbjct: 538 ------------GGPGAPPAARPPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQ 585
Query: 733 GSQGLPQQSYQQPIMLPNQAGQ-GSLPATGMPVYCNVTPPTP 773
QG PQ+ P QA Q G +P TG P P P
Sbjct: 586 QRQGPPQKP-PGPAGPTRQASQAGPVPRTGPPTTQQPRPSGP 626
Score = 44.7 bits (104), Expect = 4e-04
Identities = 56/197 (28%), Positives = 67/197 (34%), Gaps = 21/197 (10%)
Query: 502 PPTSQQPLRSAMVGQSQQQPPQQQPSPQPQQQVQPPQPQMAGPLVTQRDDVATQFGQMTL 561
P PL Q P QQ+P PQ P PQ GP + QR GQ L
Sbjct: 437 PSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQRPPPQ---GQQHL 493
Query: 562 SRQSSGETPEPPSGPVYPSSLMPQPAQQPSYVIASTGQQ-LPTGGFSGSGPPISQQVLQP 620
S P P+S QPA Q + G+Q P G G+ P +P
Sbjct: 494 SGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPP-----AARP 548
Query: 621 PPSPQGFVQQPPP-------AQMPVYYYPSGQYPTSTTQQ---YRPMAPVQYNAQRSQ-- 668
P SP Q PP P SG P +Q +P P Q SQ
Sbjct: 549 PASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQAG 608
Query: 669 QMPQAAQQAGYQPVLSG 685
+P+ QP SG
Sbjct: 609 PVPRTGPPTTQQPRPSG 625
>gi|21312134 mediator complex subunit 15 isoform b [Homo sapiens]
Length = 748
Score = 59.7 bits (143), Expect = 1e-08
Identities = 105/402 (26%), Positives = 139/402 (34%), Gaps = 59/402 (14%)
Query: 418 SSGSLSRTHPPLQSTPLVSGVAAGSPGCVPYPENGIGGQVAP-SSTSYILLPLEAATGIP 476
S S+S LQS L G AAG+ G + P G G + S + P+ + P
Sbjct: 74 SQASVSDPMNALQS--LTGGPAAGAAG-IGMPPRGPGQSLGGMGSLGAMGQPMSLSGQPP 130
Query: 477 PGSILLNPHTGQPFVNPDGTPAIYNPPTSQQPLRSAMVGQSQQQPPQQQPSPQPQQQVQP 536
PG+ + PH+ + P T Q + A+ Q QQQ QQQ QQQ Q
Sbjct: 131 PGTSGMAPHSM-------AVVSTATPQTQLQLQQVALQQQQQQQQFQQQQQAALQQQQQQ 183
Query: 537 PQPQMAGPLVTQRDDVATQFGQMTLSRQSSGETPEPPSGPV---YPSSLMPQPAQQPSYV 593
Q Q Q+ + QF + +Q + + + + + Q QQ
Sbjct: 184 QQQQQ---FQAQQSAMQQQFQAVVQQQQQLQQQQQQQQHLIKLHHQNQQQIQQQQQQLQR 240
Query: 594 IASTGQQLPTGGFSGSGPPISQQVLQPPPSPQGFVQQPPPAQMPVYYYPSGQYPTSTTQQ 653
IA Q Q + PP Q +QQP P P P TQ
Sbjct: 241 IAQLQLQQQQQQQQQQQQQQQQALQAQPPIQQPPMQQPQPP--PSQALPQQLQQMHHTQH 298
Query: 654 YRPMAPVQYNAQRSQQMPQAAQQAGYQPVLSGQQGFQGL--------------IGVQQPP 699
++P Q Q Q Q+ QP++S Q G + VQQPP
Sbjct: 299 HQPPPQPQQPPVAQNQPSQLPPQSQTQPLVSQAQALPGQMLYTQPPLKFVRAPMVVQQPP 358
Query: 700 ------QSQNVINNQQGTP-----VQSVMVSYPTMSS----YQVPMTQGSQGLPQQSYQ- 743
Q Q + Q VQ S P +SS QV Q PQ S Q
Sbjct: 359 VQPQVQQQQTAVQTAQAAQMVAPGVQVSQSSLPMLSSPSPGQQVQTPQSMPPPPQPSPQP 418
Query: 744 -QPIMLPN-QAGQGSLPA--------TGMPVYCNVTPPTPQN 775
QP PN G P+ + P VT TPQN
Sbjct: 419 GQPSSQPNSNVSSGPAPSPSSFLPSPSPQPSQSPVTARTPQN 460
Score = 45.8 bits (107), Expect = 2e-04
Identities = 44/138 (31%), Positives = 57/138 (41%), Gaps = 9/138 (6%)
Query: 505 SQQPLRSAMVGQSQQQPPQQQPSPQPQQQVQPPQPQMAGPLVTQRDDVATQFGQMTLSRQ 564
+Q PL+ QQPP Q PQ QQQ Q A +V V+ Q LS
Sbjct: 341 TQPPLKFVRAPMVVQQPPVQ---PQVQQQQTAVQTAQAAQMVAPGVQVS-QSSLPMLSSP 396
Query: 565 SSGE---TPEPPSGPVYPSSLMPQPAQQPSYVIASTGQQLPTGGFSGSGPPISQQVLQPP 621
S G+ TP+ P PS QP+ QP+ ++S P+ P SQ +
Sbjct: 397 SPGQQVQTPQSMPPPPQPSPQPGQPSSQPNSNVSSGPAPSPSSFLPSPSPQPSQSPV-TA 455
Query: 622 PSPQGF-VQQPPPAQMPV 638
+PQ F V P P PV
Sbjct: 456 RTPQNFSVPSPGPLNTPV 473
Score = 38.5 bits (88), Expect = 0.025
Identities = 41/135 (30%), Positives = 47/135 (34%), Gaps = 25/135 (18%)
Query: 497 PAIYNPPTSQQPLRSAMVGQSQQQPPQQQPSPQPQQQVQPPQPQMAGPLVTQRDDVATQF 556
P + +S L S GQ Q P P PQP QP QP
Sbjct: 381 PGVQVSQSSLPMLSSPSPGQQVQTPQSMPPPPQPSP--QPGQP----------------- 421
Query: 557 GQMTLSRQSSGETPEPPSGPVYPSSLMPQPAQQPSYVIASTGQQLPTGGFSGSGPPIS-Q 615
S SSG P P S PS PQP+Q P V A T Q P++
Sbjct: 422 SSQPNSNVSSGPAPSPSSFLPSPS---PQPSQSP--VTARTPQNFSVPSPGPLNTPVNPS 476
Query: 616 QVLQPPPSPQGFVQQ 630
V+ P S Q QQ
Sbjct: 477 SVMSPAGSSQAEEQQ 491
>gi|38788274 bromodomain PHD finger transcription factor isoform 1
[Homo sapiens]
Length = 2920
Score = 58.9 bits (141), Expect = 2e-08
Identities = 72/243 (29%), Positives = 101/243 (41%), Gaps = 21/243 (8%)
Query: 508 PLRSAMVGQSQQQPPQQQPSPQPQQQVQPPQPQMAGPLVTQRDDVATQFGQMTLSRQSSG 567
P +S+ VG ++ QP QPS QPQ Q QP P A P V + +V T Q T+S
Sbjct: 2257 PAQSSSVGPAEAQPQTAQPSAQPQPQTQPQSP--AQPEVQTQPEVQT---QTTVSSHVPS 2311
Query: 568 ETPEPPSGPVYPSSLMPQPAQQPSYVIASTGQQLPTGGFSGSGPPISQQV-LQPPPSPQG 626
E + P + S PQ A Q S ++ Q P S S I Q P Q
Sbjct: 2312 E-----AQPTHAQSSKPQVAAQ-SQPQSNVQGQSPVRVQSPSQTRIRPSTPSQLSPGQQS 2365
Query: 627 FVQQPPPAQMPVYYYPSGQYPTSTTQQYRPMAPVQYNAQ---RSQQMPQAAQQAGYQPVL 683
VQ +P+ + S Q P+ Q +P VQ + Q Q + Q + +P L
Sbjct: 2366 QVQTTTSQPIPIQPHTSLQIPSQGQPQSQPQ--VQSSTQTLSSGQTLNQVTVSSPSRPQL 2423
Query: 684 SGQQGFQGLIGV---QQPPQSQNVINNQQGTPVQSVMVSYPTMSSYQVPMTQGSQGLPQQ 740
QQ +I V QQ Q + I +Q +Q+ P Q+P+ Q Q Q
Sbjct: 2424 QIQQPQPQVIAVPQLQQQVQVLSQIQSQVVAQIQAQQSGVPQQIKLQLPI-QIQQSSAVQ 2482
Query: 741 SYQ 743
++Q
Sbjct: 2483 THQ 2485
Score = 53.5 bits (127), Expect = 8e-07
Identities = 107/430 (24%), Positives = 149/430 (34%), Gaps = 81/430 (18%)
Query: 414 SSAGSSGSLSRTHPPLQSTPLVSGVAAGSPGCVPYPENGIGGQVAPSSTSYILLPLEAAT 473
SS G+S + P +T + +GS G + G Q+ P T I PL+ +T
Sbjct: 2014 SSTGTSQQTFTSFQPRTATVTIRPNTSGSGGTTSNSQVITGPQIRPGMT-VIRTPLQQST 2072
Query: 474 ----------GIPPGS---ILLNPHTGQPFVNPDGTPAIYNPPTSQQPLRSAMVGQSQQQ 520
+ PG+ ++ GQP P + Q+ L SA + Q
Sbjct: 2073 LGKAIIRTPVMVQPGAPQQVMTQIIRGQPVSTAVSAPNTVSSTPGQKSLTSATSTSNIQS 2132
Query: 521 PPQQQPSPQPQQQVQPPQPQMAG-----------PLVTQRDDVATQFGQMTLSRQSSGET 569
Q P PQ Q QV+ Q+ +V Q T GQ+ L Q
Sbjct: 2133 SASQPPRPQ-QGQVKLTMAQLTQLTQGHGGNQGLTVVIQGQGQTT--GQLQLIPQGVTVL 2189
Query: 570 PEP---------PSGPVYPSSLMP---------QPAQQPSYVIASTGQQ----------- 600
P P P+G V P S A TG+Q
Sbjct: 2190 PGPGQQLMQAAMPNGTVQRFLFTPLATTATTASTTTTTVSTTAAGTGEQRQSKLSPQMQV 2249
Query: 601 -----LPTGGFSGSGPPISQ-QVLQPPPSPQGFVQQPPPAQMPVYYYPSGQYPTSTTQQY 654
LP S GP +Q Q QP PQ Q PAQ V P Q T T +
Sbjct: 2250 HQDKTLPPAQSSSVGPAEAQPQTAQPSAQPQPQTQPQSPAQPEVQTQPEVQTQT-TVSSH 2308
Query: 655 RPMAPVQYNAQRSQQMPQAAQQAGYQPVLSGQQGFQGLIGVQQP------PQSQNVINNQ 708
P +AQ S+ PQ A Q+ Q + GQ + VQ P P + + ++
Sbjct: 2309 VPSEAQPTHAQSSK--PQVAAQSQPQSNVQGQSP----VRVQSPSQTRIRPSTPSQLSPG 2362
Query: 709 QGTPVQ---SVMVSYPTMSSYQVPMTQGSQGLPQ-QSYQQPIMLPNQAGQGSLPATGMPV 764
Q + VQ S + +S Q+P Q PQ QS Q + Q ++ + P
Sbjct: 2363 QQSQVQTTTSQPIPIQPHTSLQIPSQGQPQSQPQVQSSTQTLSSGQTLNQVTVSSPSRP- 2421
Query: 765 YCNVTPPTPQ 774
+ P PQ
Sbjct: 2422 QLQIQQPQPQ 2431
Score = 32.0 bits (71), Expect = 2.4
Identities = 39/156 (25%), Positives = 59/156 (37%), Gaps = 18/156 (11%)
Query: 423 SRTHPPLQSTPLVSGVAAGSPGCVPYPEN-----GIGGQVAPSSTSYILLPLEAATGIPP 477
S+ QS P S V SP V P Q++P S + I P
Sbjct: 2321 SKPQVAAQSQPQ-SNVQGQSPVRVQSPSQTRIRPSTPSQLSPGQQSQVQTTTSQPIPIQP 2379
Query: 478 GSILLNPHTGQPFVNPDGTPAIYNPPTSQQPLRSAMVGQSQQQPPQQQPSPQPQQQVQPP 537
+ L P GQP + P Q ++ GQ+ Q PS Q+Q P
Sbjct: 2380 HTSLQIPSQGQP----------QSQPQVQSSTQTLSSGQTLNQVTVSSPSRPQL-QIQQP 2428
Query: 538 QPQ-MAGPLVTQRDDVATQFGQMTLSRQSSGETPEP 572
QPQ +A P + Q+ V +Q +++ + ++ P
Sbjct: 2429 QPQVIAVPQLQQQVQVLSQIQSQVVAQIQAQQSGVP 2464
>gi|150378543 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 58.9 bits (141), Expect = 2e-08
Identities = 171/826 (20%), Positives = 282/826 (34%), Gaps = 114/826 (13%)
Query: 19 QETATPENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGAGKGKL----------TRS 68
+ET P+ + E EEE+++ + + +E + S T+
Sbjct: 1208 EETVEPKEDMPLPEERKEEEEMQAEAEEAEEGEEEDAASSEVPAASPADSSNSPETETKE 1267
Query: 69 LAVCEESSARPGGESLQDQESIHLQLSSFSSLQEEDKS----RKDDSEREKEKDKNKDKT 124
V EE E + E +L +EED + + DD + + E D + + T
Sbjct: 1268 PEVEEEEEKPRVSEEQRQSEEEQQELEEPEPEEEEDAAAETAQNDDHDADDEDDGHLEST 1327
Query: 125 SEKPKIRMLSKDCSQEYTDSTGIDLHEFLINTLKNNSRDRMILLKMEQEIIDFIADNNNH 184
+K + + ++ + G+ E ++ SR++ I K E E+ D+
Sbjct: 1328 KKK---ELEEQPTREDVKEEPGVQ--ESFLDANMQKSREK-IKDKEETEL-----DSEE- 1375
Query: 185 YKKFPQMSSYQRMLVHRVAAYFGLDHNVDQTGKSVIINKTSSTRIPEQRFCEHLKDEKGE 244
+ S+ +V A DH D K +I IP L+ +
Sbjct: 1376 -----EQPSHDTSVVSEQMAGSEDDHEEDSHTKEELIELKEEEEIPHSEL--DLETVQAV 1428
Query: 245 ESQKRFILKRDNSSIDKEDNQQNRMHPFRDDRRSKSIEEREEEYQRVRERIFAHDSVCSQ 304
+S L ++ SS + E Q+ + +S + +E+ Q D S+
Sbjct: 1429 QS-----LTQEESS-EHEGAYQDCEETLAACQTLQSYTQADEDPQMS----MVEDCHASE 1478
Query: 305 ESLFVENSRLLEDSNICNETYKKRQLFRGNRDGSGRTSGSRQSSSENELKWSDHQRAWSS 364
+ + + + ++ + + GS + S ++ S S
Sbjct: 1479 HNSPISSVQSHPSQSVRSVSSPNVPALESGYTQISPEQGSLSAPSMQNMETSPMMDVPSV 1538
Query: 365 TDSDSSNRNLKPAMTKTASFGGITVLTRGDSTSSTRSTGKLSKAGSESSSSAGSSGSLSR 424
SD S + + + S T ++ SS ST S G+ SS S+ S G LS
Sbjct: 1539 --SDHSQQVVDSGFSDLGSIESTT--ENYENPSSYDSTMGGSICGNSSSQSSCSYGGLSS 1594
Query: 425 THPPLQSTPLVSG-VAAGSPGCVPYPENGIGGQVAPSSTSYILLPLEAATGIPPGSILLN 483
+ QS+ +V+ +A+ C ++ V P++ I P PP +
Sbjct: 1595 SSSLTQSSCVVTQQMASMGSSCSMMQQSS----VQPAANCSIKSPQSCVVERPPSNQQQQ 1650
Query: 484 PHTGQPFVN----PDGTPAIYNPPTSQQPLRSAMVGQSQQQPPQQQPSPQPQQQVQPPQP 539
P P P PA PP QQP Q Q QP QQP P P Q QPP
Sbjct: 1651 PPPPPPQQPQPPPPQPQPAPQPPPPQQQP-------QQQPQPQPQQPPPPPPPQQQPPLS 1703
Query: 540 QMA-------GPLVTQ------------RDDVATQFGQMTLS-----------RQSSGET 569
Q + P++ + + + FG + S +Q +
Sbjct: 1704 QCSMNNSFTPAPMIMEIPESGSTGNISIYERIPGDFGAGSYSQPSATFSLAKLQQLTNTI 1763
Query: 570 PEPPSGPVYPSSLMPQPAQQPSYVIASTGQQLPTGGFSGSGPPISQQVLQPPPSPQGFVQ 629
+P + P S + A S Q P+ +G+ P +Q + PPP+
Sbjct: 1764 MDPHAMPYSHSPAVTSYATSVSLSNTGLAQLAPSHPLAGT--PQAQATMTPPPNLASTTM 1821
Query: 630 Q--PPPAQMPVYYYPSGQYPTSTTQQYRPMAPVQYNAQRSQQMPQAA----QQAGYQPVL 683
P Q + G T Q P+ +S +P AA Q G P
Sbjct: 1822 NLTSPLLQCNMSATNIGIPHTQRLQGQMPVKGHISIRSKSAPLPSAAAHQQQLYGRSPSA 1881
Query: 684 SGQQGFQGLIGVQQPPQSQNVINNQQGTPVQSV----MVSYPTMSSYQV--PMTQGSQGL 737
Q + VQ + N+ N TP +V M + M+SY++ PM S
Sbjct: 1882 VAMQAGPRALAVQ---RGMNMGVNLMPTPAYNVNSMNMNTLNAMNSYRMTQPMMNSSYHS 1938
Query: 738 PQQSYQQPIMLPNQAGQGSLPATGMPVYC-NVTPPTPQNNLRLIGP 782
Q P Q G + G Y P P N+ GP
Sbjct: 1939 NPAYMNQTAQYPMQMQMGMM---GSQAYTQQPMQPNPHGNMMYTGP 1981
>gi|150378463 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 58.9 bits (141), Expect = 2e-08
Identities = 171/826 (20%), Positives = 282/826 (34%), Gaps = 114/826 (13%)
Query: 19 QETATPENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGAGKGKL----------TRS 68
+ET P+ + E EEE+++ + + +E + S T+
Sbjct: 1208 EETVEPKEDMPLPEERKEEEEMQAEAEEAEEGEEEDAASSEVPAASPADSSNSPETETKE 1267
Query: 69 LAVCEESSARPGGESLQDQESIHLQLSSFSSLQEEDKS----RKDDSEREKEKDKNKDKT 124
V EE E + E +L +EED + + DD + + E D + + T
Sbjct: 1268 PEVEEEEEKPRVSEEQRQSEEEQQELEEPEPEEEEDAAAETAQNDDHDADDEDDGHLEST 1327
Query: 125 SEKPKIRMLSKDCSQEYTDSTGIDLHEFLINTLKNNSRDRMILLKMEQEIIDFIADNNNH 184
+K + + ++ + G+ E ++ SR++ I K E E+ D+
Sbjct: 1328 KKK---ELEEQPTREDVKEEPGVQ--ESFLDANMQKSREK-IKDKEETEL-----DSEE- 1375
Query: 185 YKKFPQMSSYQRMLVHRVAAYFGLDHNVDQTGKSVIINKTSSTRIPEQRFCEHLKDEKGE 244
+ S+ +V A DH D K +I IP L+ +
Sbjct: 1376 -----EQPSHDTSVVSEQMAGSEDDHEEDSHTKEELIELKEEEEIPHSEL--DLETVQAV 1428
Query: 245 ESQKRFILKRDNSSIDKEDNQQNRMHPFRDDRRSKSIEEREEEYQRVRERIFAHDSVCSQ 304
+S L ++ SS + E Q+ + +S + +E+ Q D S+
Sbjct: 1429 QS-----LTQEESS-EHEGAYQDCEETLAACQTLQSYTQADEDPQMS----MVEDCHASE 1478
Query: 305 ESLFVENSRLLEDSNICNETYKKRQLFRGNRDGSGRTSGSRQSSSENELKWSDHQRAWSS 364
+ + + + ++ + + GS + S ++ S S
Sbjct: 1479 HNSPISSVQSHPSQSVRSVSSPNVPALESGYTQISPEQGSLSAPSMQNMETSPMMDVPSV 1538
Query: 365 TDSDSSNRNLKPAMTKTASFGGITVLTRGDSTSSTRSTGKLSKAGSESSSSAGSSGSLSR 424
SD S + + + S T ++ SS ST S G+ SS S+ S G LS
Sbjct: 1539 --SDHSQQVVDSGFSDLGSIESTT--ENYENPSSYDSTMGGSICGNSSSQSSCSYGGLSS 1594
Query: 425 THPPLQSTPLVSG-VAAGSPGCVPYPENGIGGQVAPSSTSYILLPLEAATGIPPGSILLN 483
+ QS+ +V+ +A+ C ++ V P++ I P PP +
Sbjct: 1595 SSSLTQSSCVVTQQMASMGSSCSMMQQSS----VQPAANCSIKSPQSCVVERPPSNQQQQ 1650
Query: 484 PHTGQPFVN----PDGTPAIYNPPTSQQPLRSAMVGQSQQQPPQQQPSPQPQQQVQPPQP 539
P P P PA PP QQP Q Q QP QQP P P Q QPP
Sbjct: 1651 PPPPPPQQPQPPPPQPQPAPQPPPPQQQP-------QQQPQPQPQQPPPPPPPQQQPPLS 1703
Query: 540 QMA-------GPLVTQ------------RDDVATQFGQMTLS-----------RQSSGET 569
Q + P++ + + + FG + S +Q +
Sbjct: 1704 QCSMNNSFTPAPMIMEIPESGSTGNISIYERIPGDFGAGSYSQPSATFSLAKLQQLTNTI 1763
Query: 570 PEPPSGPVYPSSLMPQPAQQPSYVIASTGQQLPTGGFSGSGPPISQQVLQPPPSPQGFVQ 629
+P + P S + A S Q P+ +G+ P +Q + PPP+
Sbjct: 1764 MDPHAMPYSHSPAVTSYATSVSLSNTGLAQLAPSHPLAGT--PQAQATMTPPPNLASTTM 1821
Query: 630 Q--PPPAQMPVYYYPSGQYPTSTTQQYRPMAPVQYNAQRSQQMPQAA----QQAGYQPVL 683
P Q + G T Q P+ +S +P AA Q G P
Sbjct: 1822 NLTSPLLQCNMSATNIGIPHTQRLQGQMPVKGHISIRSKSAPLPSAAAHQQQLYGRSPSA 1881
Query: 684 SGQQGFQGLIGVQQPPQSQNVINNQQGTPVQSV----MVSYPTMSSYQV--PMTQGSQGL 737
Q + VQ + N+ N TP +V M + M+SY++ PM S
Sbjct: 1882 VAMQAGPRALAVQ---RGMNMGVNLMPTPAYNVNSMNMNTLNAMNSYRMTQPMMNSSYHS 1938
Query: 738 PQQSYQQPIMLPNQAGQGSLPATGMPVYC-NVTPPTPQNNLRLIGP 782
Q P Q G + G Y P P N+ GP
Sbjct: 1939 NPAYMNQTAQYPMQMQMGMM---GSQAYTQQPMQPNPHGNMMYTGP 1981
>gi|150378493 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 58.9 bits (141), Expect = 2e-08
Identities = 171/826 (20%), Positives = 282/826 (34%), Gaps = 114/826 (13%)
Query: 19 QETATPENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGAGKGKL----------TRS 68
+ET P+ + E EEE+++ + + +E + S T+
Sbjct: 1208 EETVEPKEDMPLPEERKEEEEMQAEAEEAEEGEEEDAASSEVPAASPADSSNSPETETKE 1267
Query: 69 LAVCEESSARPGGESLQDQESIHLQLSSFSSLQEEDKS----RKDDSEREKEKDKNKDKT 124
V EE E + E +L +EED + + DD + + E D + + T
Sbjct: 1268 PEVEEEEEKPRVSEEQRQSEEEQQELEEPEPEEEEDAAAETAQNDDHDADDEDDGHLEST 1327
Query: 125 SEKPKIRMLSKDCSQEYTDSTGIDLHEFLINTLKNNSRDRMILLKMEQEIIDFIADNNNH 184
+K + + ++ + G+ E ++ SR++ I K E E+ D+
Sbjct: 1328 KKK---ELEEQPTREDVKEEPGVQ--ESFLDANMQKSREK-IKDKEETEL-----DSEE- 1375
Query: 185 YKKFPQMSSYQRMLVHRVAAYFGLDHNVDQTGKSVIINKTSSTRIPEQRFCEHLKDEKGE 244
+ S+ +V A DH D K +I IP L+ +
Sbjct: 1376 -----EQPSHDTSVVSEQMAGSEDDHEEDSHTKEELIELKEEEEIPHSEL--DLETVQAV 1428
Query: 245 ESQKRFILKRDNSSIDKEDNQQNRMHPFRDDRRSKSIEEREEEYQRVRERIFAHDSVCSQ 304
+S L ++ SS + E Q+ + +S + +E+ Q D S+
Sbjct: 1429 QS-----LTQEESS-EHEGAYQDCEETLAACQTLQSYTQADEDPQMS----MVEDCHASE 1478
Query: 305 ESLFVENSRLLEDSNICNETYKKRQLFRGNRDGSGRTSGSRQSSSENELKWSDHQRAWSS 364
+ + + + ++ + + GS + S ++ S S
Sbjct: 1479 HNSPISSVQSHPSQSVRSVSSPNVPALESGYTQISPEQGSLSAPSMQNMETSPMMDVPSV 1538
Query: 365 TDSDSSNRNLKPAMTKTASFGGITVLTRGDSTSSTRSTGKLSKAGSESSSSAGSSGSLSR 424
SD S + + + S T ++ SS ST S G+ SS S+ S G LS
Sbjct: 1539 --SDHSQQVVDSGFSDLGSIESTT--ENYENPSSYDSTMGGSICGNSSSQSSCSYGGLSS 1594
Query: 425 THPPLQSTPLVSG-VAAGSPGCVPYPENGIGGQVAPSSTSYILLPLEAATGIPPGSILLN 483
+ QS+ +V+ +A+ C ++ V P++ I P PP +
Sbjct: 1595 SSSLTQSSCVVTQQMASMGSSCSMMQQSS----VQPAANCSIKSPQSCVVERPPSNQQQQ 1650
Query: 484 PHTGQPFVN----PDGTPAIYNPPTSQQPLRSAMVGQSQQQPPQQQPSPQPQQQVQPPQP 539
P P P PA PP QQP Q Q QP QQP P P Q QPP
Sbjct: 1651 PPPPPPQQPQPPPPQPQPAPQPPPPQQQP-------QQQPQPQPQQPPPPPPPQQQPPLS 1703
Query: 540 QMA-------GPLVTQ------------RDDVATQFGQMTLS-----------RQSSGET 569
Q + P++ + + + FG + S +Q +
Sbjct: 1704 QCSMNNSFTPAPMIMEIPESGSTGNISIYERIPGDFGAGSYSQPSATFSLAKLQQLTNTI 1763
Query: 570 PEPPSGPVYPSSLMPQPAQQPSYVIASTGQQLPTGGFSGSGPPISQQVLQPPPSPQGFVQ 629
+P + P S + A S Q P+ +G+ P +Q + PPP+
Sbjct: 1764 MDPHAMPYSHSPAVTSYATSVSLSNTGLAQLAPSHPLAGT--PQAQATMTPPPNLASTTM 1821
Query: 630 Q--PPPAQMPVYYYPSGQYPTSTTQQYRPMAPVQYNAQRSQQMPQAA----QQAGYQPVL 683
P Q + G T Q P+ +S +P AA Q G P
Sbjct: 1822 NLTSPLLQCNMSATNIGIPHTQRLQGQMPVKGHISIRSKSAPLPSAAAHQQQLYGRSPSA 1881
Query: 684 SGQQGFQGLIGVQQPPQSQNVINNQQGTPVQSV----MVSYPTMSSYQV--PMTQGSQGL 737
Q + VQ + N+ N TP +V M + M+SY++ PM S
Sbjct: 1882 VAMQAGPRALAVQ---RGMNMGVNLMPTPAYNVNSMNMNTLNAMNSYRMTQPMMNSSYHS 1938
Query: 738 PQQSYQQPIMLPNQAGQGSLPATGMPVYC-NVTPPTPQNNLRLIGP 782
Q P Q G + G Y P P N+ GP
Sbjct: 1939 NPAYMNQTAQYPMQMQMGMM---GSQAYTQQPMQPNPHGNMMYTGP 1981
>gi|32307128 nuclear receptor coactivator 6 [Homo sapiens]
Length = 2063
Score = 58.9 bits (141), Expect = 2e-08
Identities = 107/396 (27%), Positives = 149/396 (37%), Gaps = 56/396 (14%)
Query: 385 GGITVLTRGDSTSSTRSTGKLSKAGSESSSS----AGSSGSLSRTHPPLQSTPLVSGVAA 440
G I + + + R G + S + A G + +P P V++
Sbjct: 133 GAINLALAQNRSQDVRMNGPMGAGNSVRMEAGFPMASGPGIIRMNNPATVMIPPGGNVSS 192
Query: 441 GSPGCVPYPENGIGGQVAPSSTSYILLPLEAATGI-----PPGSILLNPHTGQPF-VNPD 494
P PE P+S S + PL + I P GS+ H QP VN
Sbjct: 193 SMMAPGPNPELQ-PRTPRPASQSDAMDPLLSGLHIQQQSHPSGSLAPPHHPMQPVSVNRQ 251
Query: 495 GTPAIYNPPTSQQPLRSAMVGQSQQQPPQQQPSPQPQQQVQPPQPQMAGPLVTQRDDVAT 554
PA + P QQ + Q QQQ QQQ Q QQQ+Q PQ Q +
Sbjct: 252 MNPANF-PQLQQQQQQQ----QQQQQQQQQQQQQQQQQQLQARPPQQHQQ--QQPQGIRP 304
Query: 555 QFGQMTLSRQSSGETPEPPSGPVYPS-SLMPQPAQQPSYVIASTGQQLPTGGFSGSG-PP 612
QF T + P PP PS +L P PAQ S G G+ + P
Sbjct: 305 QFTAPT-------QVPVPPGWNQLPSGALQPPPAQ------GSLGTMTANQGWKKAPLPG 351
Query: 613 ISQQVLQPPPSPQGFVQQPPPAQMPVYYYPSGQYPTSTTQQYRPMAPVQYNAQRSQQMPQ 672
QQ LQ PS Q P P Y + S Q + T + P Q+ A + + +
Sbjct: 352 PMQQQLQARPSLA--TVQTPSHPPPPYPFGSQQASQAHTNFPQMSNPGQFTAPQMKSL-- 407
Query: 673 AAQQAGYQPVLSGQQGFQGLIGVQQPPQSQNVINNQQGTPVQSVMVSYPTMSSYQV---P 729
Q G V + Q Q + + P S + + QQG+P S PT++ Q P
Sbjct: 408 ---QGGPSRVPTPLQ--QPHLTNKSPASSPS--SFQQGSPASS-----PTVNQTQQQMGP 455
Query: 730 MTQGSQGLPQQSYQQPIMLPNQ---AGQGSLPATGM 762
+ LP Q +QQP+ P + QG++P M
Sbjct: 456 RPPQNNPLP-QGFQQPVSSPGRNPMVQQGNVPPNFM 490
Score = 55.1 bits (131), Expect = 3e-07
Identities = 79/309 (25%), Positives = 105/309 (33%), Gaps = 60/309 (19%)
Query: 497 PAIYNPPTSQQPLRSAMVGQSQQ------QPPQQQPSPQPQQQVQPPQPQMAGPLVTQRD 550
P + P Q+PL+ M Q Q QPPQQQP PQ QQ QPP P P Q+
Sbjct: 971 PGYPSQPVEQRPLQQ-MPPQLMQHVAPPPQPPQQQPQPQLPQQQQPPPPSQ--PQSQQQQ 1027
Query: 551 DVATQFGQMTLSRQSS-------GETPEPPSGPVYPSSLMPQPAQQPSYVIASTGQQLPT 603
Q M + +Q + PP GP+ P S P QQ V Q P
Sbjct: 1028 QQQQQMMMMLMMQQDPKSVRLPVSQNVHPPRGPLNPDS-QRMPMQQSGSVPVMVSLQGPA 1086
Query: 604 GGFSGSGPPISQQVLQPPPSPQGFVQQPPPAQMPVYYYPSGQYPTSTTQQYRPMAPVQYN 663
S P Q++ P +P G + Y S Q P+S+ P + +
Sbjct: 1087 ---SVPPSPDKQRMPMPVNTPLG------SNSRKMVYQESPQNPSSSPLAEMASLP-EAS 1136
Query: 664 AQRSQQMPQAAQQAGYQPVLSGQQGFQGLIGVQQPPQSQNVINNQQGTPVQSVMVSYPTM 723
+ +P VL Q L+ P + Q TP Q + S P+
Sbjct: 1137 GSEAPSVPGGPNNMPSHVVLPQNQ----LMMTGPKPGPSPLSATQGATPQQPPVNSLPSS 1192
Query: 724 SSYQVPMTQGSQGLPQQSYQQPIMLPNQAGQGSLP--ATGMPVYCNVTPPTPQNNLRLIG 781
+ P + P Q + P A+ P Y P TP N
Sbjct: 1193 HGHHFP---------------NVAAPTQTSRPKTPNRASPRPYY----PQTPNNR----- 1228
Query: 782 PHCPSSTVP 790
P ST P
Sbjct: 1229 ---PPSTEP 1234
Score = 46.6 bits (109), Expect = 9e-05
Identities = 90/397 (22%), Positives = 139/397 (35%), Gaps = 62/397 (15%)
Query: 419 SGSLSRTHPPLQSTPL----VSGVAAGSPGCVPYPENGIGGQVAPSSTSYIL------LP 468
SG + P+ ++P + G PG P+ G ++ L +
Sbjct: 763 SGQMLPQQGPVNNSPSQVMGIQGQVLRPPGPSPHMAQQHGDPATTANNDVSLSQMMPDVS 822
Query: 469 LEAATGIPPGSILL--NPHTGQPFVNPDGTPAIYNPPTSQQPLRSAMVGQSQQQPPQQQP 526
++ +PP + N +G F G +N P S P Q Q P
Sbjct: 823 IQQTNMVPPHVQAMQGNSASGNHF---SGHGMSFNAPFSGAP-------NGNQMSCGQNP 872
Query: 527 SPQPQQQVQPPQPQMAGPLVTQRDDVATQFGQMTLSRQSSGETPE---PPSGPVYPSSLM 583
+ V P + L Q D A FG ++ P+ PP +
Sbjct: 873 GFPVNKDVTLTSPLLVNLL--QSDISAGHFGVNNKQNNTNANKPKKKKPPRKKKNSQQDL 930
Query: 584 PQPAQQPSYVIASTGQQLPTG---GFSGSGPPISQQVLQPPPSPQGFVQQPPPAQMPVYY 640
P +P+ + + LP SGP + + +PP P V+Q P QMP
Sbjct: 931 NTPDTRPAGLEEADQPPLPGEQGINLDNSGPKLPEFSNRPPGYPSQPVEQRPLQQMPPQL 990
Query: 641 YPS-GQYPTSTTQQYRPMAPVQYNAQRSQQMPQAAQQAGYQPVLSGQQGFQGLIGVQQPP 699
P QQ +P P QQ P Q Q QQ ++ +QQ P
Sbjct: 991 MQHVAPPPQPPQQQPQPQLP-------QQQQPPPPSQPQSQQQQQQQQQMMMMLMMQQDP 1043
Query: 700 QSQNVINNQQGTPVQSVMVSYPTMSSYQVPMTQGSQGLP-QQSYQQPIMLPNQAGQGSLP 758
+S + +Q P + P+ SQ +P QQS P+M+ Q G S+P
Sbjct: 1044 KSVRLPVSQNVHPPRG-------------PLNPDSQRMPMQQSGSVPVMVSLQ-GPASVP 1089
Query: 759 AT----GMPVYCNVTPPTPQNNLRLI---GPHCPSST 788
+ MP+ N P N+ +++ P PSS+
Sbjct: 1090 PSPDKQRMPMPVNT--PLGSNSRKMVYQESPQNPSSS 1124
Score = 40.0 bits (92), Expect = 0.009
Identities = 105/387 (27%), Positives = 135/387 (34%), Gaps = 108/387 (27%)
Query: 426 HPPLQSTP--LVSGVAAGSPGCVPYPENGIGGQVAPSSTSYILLPLEAATGIPPGSILLN 483
HP L P L G +AG N + GQV PS+T+ +G P N
Sbjct: 505 HPGLGGMPKRLPPGFSAGQAN-----PNFMQGQV-PSTTA----TTPGNSGAPQLQANQN 554
Query: 484 -PHTGQPFVNP--DGTPAIYNPPTSQQPL----------------------RSAMVGQSQ 518
H G P + + PP QP S M GQ Q
Sbjct: 555 VQHAGGQGAGPPQNQMQVSHGPPNMMQPSLMGIHGNMNNQQAGTSGVPQVNLSNMQGQPQ 614
Query: 519 QQPPQQQPSPQPQQQVQPPQPQMA---------GPLVTQRDDVATQFGQMTLSRQSSGET 569
Q PP Q QQ+ P Q QM P++ R + Q GQM ++
Sbjct: 615 QGPPSQLMG--MHQQIVPSQGQMVQQQGTLNPQNPMILSRAQLMPQ-GQMMVN------- 664
Query: 570 PEPPSGPVYPSSLMPQPAQQPSYVIASTGQQLPTGGFSGSGPPISQQVLQPPP------- 622
PPS + PS PQ P +++ G Q+ GP Q +LQ P
Sbjct: 665 --PPSQNLGPS---PQRMTPPKQMLSQQGPQMMAPHNQMMGPQ-GQVLLQQNPMIEQIMT 718
Query: 623 -SPQGFVQQ----------PPPAQMPVYYYPSGQYPTSTTQQYRPMAPVQYNAQRSQQMP 671
QG QQ P PAQ+ + PT Q VQ+ Q S QM
Sbjct: 719 NQMQGNKQQFNTQNQSNVMPGPAQIM-------RGPTPNMQGNM----VQFTGQMSGQM- 766
Query: 672 QAAQQAGYQPVLSGQQGFQGLIGVQQPPQSQNVINNQQGTPVQSVMVSYPTMSSYQVPMT 731
QQ S G QG V +PP + Q G P T ++ V +
Sbjct: 767 -LPQQGPVNNSPSQVMGIQG--QVLRPPGPSPHMAQQHGDPA--------TTANNDVSL- 814
Query: 732 QGSQGLPQQSYQQPIMLPN--QAGQGS 756
SQ +P S QQ M+P QA QG+
Sbjct: 815 --SQMMPDVSIQQTNMVPPHVQAMQGN 839
Score = 34.3 bits (77), Expect = 0.48
Identities = 39/169 (23%), Positives = 65/169 (38%), Gaps = 35/169 (20%)
Query: 405 LSKAGSESSSSAGSSGSLSRTHPP------LQSTPLVSGVAAGSPGCVPYPENGIGGQVA 458
+ AGS+ S G S + S P + S+ ++ + P +P +
Sbjct: 1631 MPNAGSKVMVSEGQSAAQSNARPQFITPVFINSSSIIQVMKGSQPSTIPAAPLTTNSGLM 1690
Query: 459 PSSTSYILLPLE-------AATGIPPGSILLNP----HTGQPFV-NPDGTPA-IYNPPTS 505
P S + ++ PL ++ +PP ++ +P TG+P V + TP + +PP +
Sbjct: 1691 PPSVA-VVGPLHIPQNIKFSSAPVPPNALSSSPAPNIQTGRPLVLSSRATPVQLPSPPCT 1749
Query: 506 QQPLRSAMVGQSQQQPPQQQPSPQPQQQVQPPQPQMAGPLVTQRDDVAT 554
P+ PS P QQV+ P A P V D T
Sbjct: 1750 SSPV---------------VPSHPPVQQVKELNPDEASPQVNTSADQNT 1783
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 58.2 bits (139), Expect = 3e-08
Identities = 106/441 (24%), Positives = 151/441 (34%), Gaps = 49/441 (11%)
Query: 364 STDSDSSNRNLKPAMTKTASFGGITVLTRGDSTSSTRSTGKLSKAGSESSSSAGSSGSLS 423
S+ S+ S PA + S GG L R S S + S LS S+ G+ + +
Sbjct: 210 SSASEHSTTEPSPAARRRPSAGG--GLQRPASRSLSSSATPLSSPARSGPSARGTPRAPA 267
Query: 424 RTHPPLQSTPLVSGVAAGSPGCVPYPENGIGGQVAPSSTSYILLPLEAATG---IPPGSI 480
HP S P G+ A P V P + P S+S + P + T +PP
Sbjct: 268 --HP---SQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDN 322
Query: 481 LLNPHTGQ-PFVNPDGTPAIYNPPTSQQPLRSAMVGQSQQQPPQQQPSPQPQQQVQPPQP 539
P P P TP PP+ P Q+ PP PS P PP
Sbjct: 323 AATPLPATLPPSPPLATPLPLAPPSPSAPPSL----QTLPSPPATPPSQAPPSMTTPPM- 377
Query: 540 QMAGPLVTQRDDVATQFGQMTLSRQSSGETPEPPSGPVYPSSLMPQPAQQPSYVIASTGQ 599
A P + + + S Q+ PPS P+ SSL Q + + S
Sbjct: 378 -QAPPSLQTIPPIQVPHSLTSPSLQA------PPS-PLALSSL------QATTSLGSPTL 423
Query: 600 QLPTGGFSGSGPPISQQVLQPPPSPQGFVQQPPPAQMPVYYYPSGQYPTSTTQQYRPMA- 658
Q T F P +Q L P P PP Q P+ S TS + P++
Sbjct: 424 QA-THSFLTMSPRQTQASLTSPSRPASTPPDSPPLQAPLSLPASPPLQTSLSPAVSPLSS 482
Query: 659 -----PVQYNAQRSQQMPQAAQQAGYQPVLSGQQGFQGLIGVQQPPQSQNVINNQQGTPV 713
P+Q + + PQA + P L Q PP Q + P+
Sbjct: 483 PLTIHPLQALSSLASHSPQAPLSSLIMPPLETQSSL-------APPSLQTPPASLTTPPL 535
Query: 714 QSV-MVSYPTMSSYQVPMTQGSQGLPQQSYQQPIMLPNQAGQGSLPATGMPVYCNVTPPT 772
+++ ++ P + + P+T P P P QA L ++ P
Sbjct: 536 ENLPSLAPPPLQTASAPLTTPHLETP----PCPAPCPLQAPPSPLTTPPPETPSSIATPP 591
Query: 773 PQNNLRLIGPHCPSSTVPVMS 793
PQ L P P +S
Sbjct: 592 PQAPPALASPPLQGLPSPPLS 612
Score = 53.1 bits (126), Expect = 1e-06
Identities = 75/321 (23%), Positives = 100/321 (31%), Gaps = 28/321 (8%)
Query: 425 THPPLQSTPLVSGVAAGSPGCVPYPENGIGGQVAPSSTSYILLPLEAATGIPPGSILLNP 484
T PP + + + P P G+ PS L PL P + L P
Sbjct: 578 TPPPETPSSIATPPPQAPPALASPPLQGL-----PSPP---LSPLATPPPQAPPXLALPP 629
Query: 485 HTGQPFVNPDGTPAIYNPPTSQQPLRSAMVGQSQQQPPQQQPSPQPQQQVQPPQPQMAGP 544
P +P +P + T +A+ Q P PSP Q PP P
Sbjct: 630 LQAPP--SPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSP 687
Query: 545 LVTQRDDVATQFGQMTLSRQSSGETPEPPSGPVYPSSLMPQPAQQPSYVIASTGQQLPTG 604
T L P PP+ P S P P P +A+ Q+P
Sbjct: 688 SATPPSQAPPSLAAPPLQ-----VPPSPPASPPMSPSATPPPQAPPP--LAAPPLQVPPS 740
Query: 605 GFSGSGPPISQQVLQPPPSPQGFVQQPPPAQMPVYYYPSGQYPTSTTQQYRPMAPVQYNA 664
+ PP+S PP P + PP Q+P P P S + P AP
Sbjct: 741 --PPASPPMSPSATPPPRVPP--LLAAPPLQVPP--SPPASLPMSPLAKPPPQAPPALAT 794
Query: 665 QRSQQMPQAAQQAGYQPVLSGQQGFQGLIGVQQPPQSQNVINNQQGTPVQSVMVSYPTMS 724
Q +P Q S PPQ+ V+ P+ V S P
Sbjct: 795 PPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVL----AAPLLQVPPSPPASP 850
Query: 725 SYQVPMTQGSQGLPQQSYQQP 745
+ Q P + G P S P
Sbjct: 851 TLQAPRRPPTPG-PDTSVSGP 870
Score = 47.0 bits (110), Expect = 7e-05
Identities = 113/487 (23%), Positives = 152/487 (31%), Gaps = 97/487 (19%)
Query: 377 AMTKTASFGGITV-LTRGDSTSSTRSTGKLSKAGSESSSSAGSSGSLSR-----THPPLQ 430
++ T S G T+ T T S R T + S +S+ S L PPLQ
Sbjct: 411 SLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSPPLQAPLSLPASPPLQ 470
Query: 431 STPLVSGVAAGSPGCVPYPENGIGGQVAPSS----TSYILLPLEAATGI-------PPGS 479
T L V+ S +P + + S +S I+ PLE + + PP S
Sbjct: 471 -TSLSPAVSPLSSPLTIHPLQALSSLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPPAS 529
Query: 480 ILLNPHTGQPFVNPDG---------TPAIYNPP--------------TSQQPLRSAMVGQ 516
+ P P + P TP + PP T+ P + +
Sbjct: 530 LTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIAT 589
Query: 517 SQQQPPQQQPSPQPQQQVQPPQPQMAGPLVTQRDDVATQFGQMTLSRQSSGETPEPPSGP 576
Q P SP Q PP +A P +A Q P PP+ P
Sbjct: 590 PPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQ---------APPSPPASP 640
Query: 577 VYPSSLMPQPAQQPSYVIASTGQQLPTGGFSGSGPPISQQVLQPPPSPQGFVQQPPPAQM 636
P S + P+ Q +A Q P FS P Q PP SP PP+Q
Sbjct: 641 --PLSPLATPSPQAPNALAVHLLQAP---FSPPPSPPVQAPFSPPASPPVSPSATPPSQA 695
Query: 637 P---------VYYYPSGQYPTSTTQQYRPMAPVQYNAQRSQQMPQAAQQAGYQPVLSGQQ 687
P V P P S + P AP A Q P P +
Sbjct: 696 PPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPP 755
Query: 688 GFQGLIG-------------------VQQPPQSQNVINNQQGTPVQSVMVSYPTMSSYQV 728
L+ + PPQ+ + TP + S P Q
Sbjct: 756 RVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPAL----ATPPLQALPSPPASFPGQA 811
Query: 729 PMTQGSQGLPQQSYQQPIMLPNQAGQGSLPATGMPVYCNVTPPTPQNNLRLIGPHCPSST 788
P + S LP P P QA P P+ PP+P + L P P +
Sbjct: 812 PFSP-SASLPMSPLATP---PPQAP----PVLAAPLL--QVPPSPPASPTLQAPRRPPTP 861
Query: 789 VPVMSAS 795
P S S
Sbjct: 862 GPDTSVS 868
Score = 46.2 bits (108), Expect = 1e-04
Identities = 59/226 (26%), Positives = 74/226 (32%), Gaps = 12/226 (5%)
Query: 413 SSSAGSSGSLSRTHPPLQSTPLVSGVAAGSPGCVPYPENGIGGQVAPSSTSYILLPLEAA 472
S A S S T PP PL + P P P + P
Sbjct: 709 SPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQV 768
Query: 473 TGIPPGSILLNPHTGQPFVNPDGTPAIYNPPTSQQPLRSAMV-GQSQQQPPQQQP-SPQP 530
PP S+ ++P P P PA+ PP P A GQ+ P P SP
Sbjct: 769 PPSPPASLPMSPLAKPP---PQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLA 825
Query: 531 QQQVQPPQPQMAGPLVTQRDDVATQFGQMTLSRQSSGETPEPP---SGPVYPSSLMPQPA 587
Q P P +A PL+ TL TP P SGP +L P P
Sbjct: 826 TPPPQAP-PVLAAPLLQVPPSPPAS---PTLQAPRRPPTPGPDTSVSGPRLTLALAPGPP 881
Query: 588 QQPSYVIASTGQQLPTGGFSGSGPPISQQVLQPPPSPQGFVQQPPP 633
PS +ST G S S +++ P+G PP
Sbjct: 882 PPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPP 927
Score = 45.4 bits (106), Expect = 2e-04
Identities = 104/447 (23%), Positives = 149/447 (33%), Gaps = 78/447 (17%)
Query: 375 KPAMTKTASFGGITVLTRGDSTSSTRSTGKLSKAGSESSSSAGSSGSLSRTHPPLQSTP- 433
KP + GG T+ TRS G S+ +S +SG R P ++P
Sbjct: 56 KPLAERAGGIGGATIPESAPRAGPTRSAGTSSR---NPASRPPASGRGERAPPAKNTSPG 112
Query: 434 --LVSGVAAGSPGCVPYPENGI-----------GGQVAPSSTSYILLPLEAATGIPPG-- 478
G A+G+ P + G+ AP ++ +G PG
Sbjct: 113 PVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTP 172
Query: 479 -------SILLNPHTGQPFVNPDGTPAIYNPPTSQQPLRSAMVGQSQQQPPQQQPSPQPQ 531
S G P P P PPT + P +S S + +PSP +
Sbjct: 173 SPAMARRSRAAGTEVGLPRPAPSARP---RPPT-EGPRKSV---SSASEHSTTEPSPAAR 225
Query: 532 QQVQPPQPQMAG----PLVTQRDDVATQFGQMTLSRQSSGETPEPPSGPVYPSSLMPQPA 587
+ +P G P AT S S+ TP P+ P P Q A
Sbjct: 226 R-----RPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQ-A 279
Query: 588 QQPSYVIASTGQQLPTGGFSGSGPPISQQVLQPPPSPQGFVQQP-PPAQMPVYYYPSGQY 646
+P V P G P+S L PSP G +P PP P+
Sbjct: 280 LRPPQVTPPRKDAAPALG------PLSSSPL-ATPSPSGTKARPVPPPDNAATPLPATLP 332
Query: 647 PTSTTQQYRPMAPVQYNAQRSQQM--------PQAAQQAGYQPVLSGQQGFQGLIGVQQP 698
P+ P+AP +A S Q P A + P + Q + +Q P
Sbjct: 333 PSPPLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVP 392
Query: 699 ----------PQSQNVINNQQ-----GTPVQSVMVSYPTMSSYQVPMTQGSQGLPQQSYQ 743
P S +++ Q G+P S+ TMS Q TQ S P +
Sbjct: 393 HSLTSPSLQAPPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQ---TQASLTSPSRPAS 449
Query: 744 QPIMLPNQAGQGSLPATGMPVYCNVTP 770
P P SLPA+ P+ +++P
Sbjct: 450 TPPDSPPLQAPLSLPAS-PPLQTSLSP 475
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 58.2 bits (139), Expect = 3e-08
Identities = 101/420 (24%), Positives = 141/420 (33%), Gaps = 57/420 (13%)
Query: 395 STSSTRSTGKLSKAGSESSSSAGSSGSLSRTHPPLQSTPLVS---------GVAAGSPGC 445
S T + GK ++A S+ SAG+ S P S + G+ +P
Sbjct: 128 SAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSA 187
Query: 446 VPYPENGIGGQVAPSSTSYILLPLEAATGIPPGSILLNPHTGQPFVNPDGTPAIYNPPTS 505
P P G + + SS S E +T P + P G P +
Sbjct: 188 RPRPPTE-GPRKSVSSAS------EHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPL 240
Query: 506 QQPLRSAMVGQSQQQPPQQ--QPSPQPQQQVQPPQPQMAGPLVTQRDDVATQFGQMTLSR 563
P RS + + P QP P+ Q ++PPQ + R D A G ++ S
Sbjct: 241 SSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQ------VTPPRKDAAPALGPLSSSP 294
Query: 564 QS--SGETPEPPSGPVYPSSLMPQPAQQPSYVIASTGQQL--PTGGFSGSGPPISQQVLQ 619
+ S P PS P +L PA PS S G T F S PP+S
Sbjct: 295 LATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPS-PPLSPLATP 353
Query: 620 PPPSPQGFVQQPPPAQMPVYYYPSGQYPTSTTQQYRPMAP----VQYNAQRSQQMPQAAQ 675
PP +P PP Q P P P S P AP V P
Sbjct: 354 PPQAPPALAL--PPLQAPP--SPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPV 409
Query: 676 QAGYQPVLSGQQGFQGLIGVQQPPQSQNVINNQQGTP-VQSVMVSYPTMSSYQVPMTQGS 734
QA + P S PP S + Q P + + + P PM+ +
Sbjct: 410 QAPFSPPAS-------------PPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSA 456
Query: 735 QGLPQQS---YQQPIMLPNQAGQGSLPATGMPVYCNVTPPTPQNNLRLIGPHCPSSTVPV 791
PQ P+ L Q PA P + P+P + P PS+++P+
Sbjct: 457 TPPPQAPPPLAAPPLQLAKPPPQAP-PALATPPLQAL--PSPPASFPGQAPFSPSASLPM 513
Score = 48.1 bits (113), Expect = 3e-05
Identities = 79/312 (25%), Positives = 103/312 (33%), Gaps = 60/312 (19%)
Query: 410 SESSSSAGSSGSLSRTHPPLQSTPLVSGVAAGSPGCVPYPENGIGGQVAPSSTSYILLPL 469
S++++S GS +L TH L S PL SP P P+ AP + + L PL
Sbjct: 324 SQATTSLGSP-TLQATHSFLPSPPL-------SPLATPPPQ-------APPALA--LPPL 366
Query: 470 EAATGIPPGSILLNPHTGQPFVNPDGTPAIYNPPTSQQPLRSAMVGQSQQQPPQQQPSPQ 529
+A PP S P ++P TP+ P +A+ Q P PSP
Sbjct: 367 QAPPS-PPAS---------PPLSPLATPSPQAP--------NALAVHLLQAPFSPPPSPP 408
Query: 530 PQQQVQPPQPQMAGPLVTQRDDVATQFGQMTLSRQSSGETPEPPSGPVYPSSLMPQPAQQ 589
Q PP P T L S P S P P P
Sbjct: 409 VQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAA 468
Query: 590 PSYVIASTGQQLPTGGFSGSGPPISQQVLQPPPSPQGFVQQPPPAQMPVYYYPSGQYPTS 649
P +A Q P P ++ LQ PSP P Q P + PS P S
Sbjct: 469 PPLQLAKPPPQAP--------PALATPPLQALPSPPASF----PGQAP--FSPSASLPMS 514
Query: 650 TTQQYRPMAPVQYNAQRSQ-----------QMPQAAQQAGYQPVLSGQQGFQGLIGVQQP 698
P AP A Q Q P+ G +SG + L P
Sbjct: 515 PLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPP 574
Query: 699 PQSQNVINNQQG 710
P S++ + G
Sbjct: 575 PPSRSPSSTLSG 586
Score = 40.4 bits (93), Expect = 0.007
Identities = 61/226 (26%), Positives = 75/226 (33%), Gaps = 35/226 (15%)
Query: 413 SSSAGSSGSLSRTHPPLQSTPLVSGVAAGSPGCVPYPENGIGGQVAPSSTSYILLPLEAA 472
S++ S S PPLQ P SP P P+ AP PL A
Sbjct: 424 SATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQ-------APP-------PLAA- 468
Query: 473 TGIPPGSILLNPHTGQPFVNPDGTPAIYNPPTSQQPLRSAMV-GQSQQQPPQQQP-SPQP 530
PP + P P PA+ PP P A GQ+ P P SP
Sbjct: 469 ---PPLQLAKPP--------PQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLA 517
Query: 531 QQQVQPPQPQMAGPLVTQRDDVATQFGQMTLSRQSSGETPEPP---SGPVYPSSLMPQPA 587
Q P P +A PL+ TL TP P SGP +L P P
Sbjct: 518 TPPPQAP-PVLAAPLLQVPPSPPAS---PTLQAPRRPPTPGPDTSVSGPRLTLALAPGPP 573
Query: 588 QQPSYVIASTGQQLPTGGFSGSGPPISQQVLQPPPSPQGFVQQPPP 633
PS +ST G S S +++ P+G PP
Sbjct: 574 PPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPP 619
>gi|157743257 POU domain, class 6, transcription factor 2 [Homo
sapiens]
Length = 691
Score = 57.8 bits (138), Expect = 4e-08
Identities = 112/459 (24%), Positives = 151/459 (32%), Gaps = 96/459 (20%)
Query: 394 DSTSSTRSTGKLSKA-GSESSSSAGSSGS--LSRTHPPLQSTP-----------LVSGVA 439
+S S + KL A G+ + S G+ S+THPP P V+GV
Sbjct: 51 ESNDSEDTPSKLFGARGNPALSDPGTPDQHQASQTHPPFPVGPQPLLTAQQLASAVAGVM 110
Query: 440 AGSPGCVPYP---ENGIGGQVAPSSTSYILLPLEAATGIPPGSILLNPHTG---QPFVNP 493
G P + P + GQ+ + LP T I G + G P N
Sbjct: 111 PGGPPALNQPILIPFNMAGQLGGQQGLVLTLPTANLTNIQ-GLVAAAAAGGIMTLPLQNL 169
Query: 494 DGTPAIYNPPTSQQPLRSAMVGQSQQQPP---QQQPSPQPQ-------QQVQPPQPQMAG 543
T ++ + Q Q QQQPP Q P P PQ Q +QP PQ
Sbjct: 170 QATSSLNSQLQQLQLQLQQQQQQQQQQPPPSTNQHPQPAPQAPSQSQQQPLQPTPPQQPP 229
Query: 544 PLVTQRDDVATQFGQMTLSRQSSGETPEPPSGPVYPSSLMPQPAQQPSYVIASTGQQLPT 603
P Q P P PQP Q +
Sbjct: 230 PASQQ------------------------PPAPTSQLQQAPQPQQHQPH----------- 254
Query: 604 GGFSGSGPPISQQVLQPPPSPQGFVQQPPPAQMPVYYYPSGQYPTSTTQQY-RPMAPVQY 662
SQ QP P+ Q P+Q P + PS P + Q P+A
Sbjct: 255 --------SHSQNQNQPSPTQQSSSPPQKPSQSPGHGLPSPLTPPNPLQLVNNPLA--SQ 304
Query: 663 NAQRSQQMPQAAQQAGYQPVLSGQQGFQG---------LIG----VQQPPQSQNVINNQQ 709
A + M A + LS QG G +IG + P S + Q
Sbjct: 305 AAAAAAAMSSIASSQAFGNALSSLQGVTGQLVTNAQGQIIGTIPLMPNPGPSSQAASGTQ 364
Query: 710 GTPVQSVMVSYPTMSSYQVPMTQ-GSQGLPQQSYQQPIMLPNQAGQGSLPATGMPVYCNV 768
G VQ + T + Q+ T G+Q LP + Q + P + GQ P +V
Sbjct: 365 GLQVQPITPQLLTNAQGQIIATVIGNQILPVINTQGITLSPIKPGQ----QLHQPSQTSV 420
Query: 769 TPPTPQNN-LRLIGPHCPSSTVPVMSASCRTNCASMSNA 806
Q N L L S PV AS ++ +S S+A
Sbjct: 421 GQAASQGNLLHLAHSQASMSQSPVRQASSSSSSSSSSSA 459
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.308 0.126 0.358
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,644,020
Number of Sequences: 37866
Number of extensions: 2197332
Number of successful extensions: 25051
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 285
Number of HSP's successfully gapped in prelim test: 1472
Number of HSP's that attempted gapping in prelim test: 13176
Number of HSP's gapped (non-prelim): 7792
length of query: 812
length of database: 18,247,518
effective HSP length: 111
effective length of query: 701
effective length of database: 14,044,392
effective search space: 9845118792
effective search space used: 9845118792
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.