Guide to the Human Genome
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Search of human proteins with 38195093

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|38195093 GalNAc transferase 10 isoform b [Homo sapiens]
         (274 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|38195093 GalNAc transferase 10 isoform b [Homo sapiens]            589   e-168
gi|38195091 GalNAc transferase 10 isoform a [Homo sapiens]            547   e-156
gi|194018457 N-acetylgalactosaminyltransferase-like 6 [Homo sapi...   422   e-118
gi|145309313 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ac...   152   4e-37
gi|157502212 polypeptide N-acetylgalactosaminyltransferase 7 [Ho...   150   9e-37
gi|13124891 polypeptide N-acetylgalactosaminyltransferase 1 [Hom...   149   2e-36
gi|34452725 polypeptide N-acetylgalactosaminyltransferase 4 [Hom...   134   1e-31
gi|71043692 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ace...   131   6e-31
gi|60498976 N-acetylgalactosaminyltransferase 14 [Homo sapiens]       127   1e-29
gi|115298684 polypeptide N-acetylgalactosaminyltransferase 6 [Ho...   126   2e-29
gi|153266878 polypeptide N-acetylgalactosaminyltransferase 3 [Ho...   126   2e-29
gi|190014583 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ac...   124   9e-29
gi|32698686 N-acetylgalactosaminyltransferase 5 [Homo sapiens]        122   3e-28
gi|4758412 polypeptide N-acetylgalactosaminyltransferase 2 [Homo...   115   3e-26
gi|153792095 N-acetylgalactosaminyltransferase 11 [Homo sapiens]      115   5e-26
gi|112807221 N-acetylgalactosaminyltransferase 12 [Homo sapiens]      107   1e-23
gi|22538495 UDP-GalNAc:polypeptide N-acetylgalactosaminyltransfe...    99   4e-21
gi|222446618 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ac...    93   2e-19
gi|8393412 polypeptide N-acetylgalactosaminyltransferase 8 [Homo...    90   2e-18
gi|21686971 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ace...    87   2e-17
gi|169790926 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ac...    85   6e-17
gi|38327556 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ace...    68   1e-11
gi|8922631 exonuclease 3'-5' domain containing 2 [Homo sapiens]        29   5.1  
gi|22035558 transcription initiation factor IIIB isoform 3 [Homo...    29   5.1  
gi|22035556 transcription initiation factor IIIB isoform 1 [Homo...    29   5.1  
gi|10834994 interleukin 11 precursor [Homo sapiens]                    28   6.6  
gi|7656861 a disintegrin and metalloprotease domain 18 prepropro...    28   6.6  
gi|144446030 lymphocyte antigen 75 [Homo sapiens]                      28   6.6  
gi|61676197 zinc finger protein 440 like [Homo sapiens]                28   8.6  

>gi|38195093 GalNAc transferase 10 isoform b [Homo sapiens]
          Length = 274

 Score =  589 bits (1518), Expect = e-168
 Identities = 274/274 (100%), Positives = 274/274 (100%)

Query: 1   MLAWRDGELEAETSSSLFLLAMQVWMCGGRMEDIPCSRVGHIYRKYVPYKVPAGVSLARN 60
           MLAWRDGELEAETSSSLFLLAMQVWMCGGRMEDIPCSRVGHIYRKYVPYKVPAGVSLARN
Sbjct: 1   MLAWRDGELEAETSSSLFLLAMQVWMCGGRMEDIPCSRVGHIYRKYVPYKVPAGVSLARN 60

Query: 61  LKRVAEVWMDEYAEYIYQRRPEYRHLSAGDVAVQKKLRSSLNCKSFKWFMTKIAWDLPKF 120
           LKRVAEVWMDEYAEYIYQRRPEYRHLSAGDVAVQKKLRSSLNCKSFKWFMTKIAWDLPKF
Sbjct: 61  LKRVAEVWMDEYAEYIYQRRPEYRHLSAGDVAVQKKLRSSLNCKSFKWFMTKIAWDLPKF 120

Query: 121 YPPVEPPAAAWGEIRNVGTGLCADTKHGALGSPLRLEGCVRGRGEAAWNNMQVFTFTWRE 180
           YPPVEPPAAAWGEIRNVGTGLCADTKHGALGSPLRLEGCVRGRGEAAWNNMQVFTFTWRE
Sbjct: 121 YPPVEPPAAAWGEIRNVGTGLCADTKHGALGSPLRLEGCVRGRGEAAWNNMQVFTFTWRE 180

Query: 181 DIRPGDPQHTKKFCFDAISHTSPVTLYDCHSMKGNQLWKYRKDKTLYHPVSGSCMDCSES 240
           DIRPGDPQHTKKFCFDAISHTSPVTLYDCHSMKGNQLWKYRKDKTLYHPVSGSCMDCSES
Sbjct: 181 DIRPGDPQHTKKFCFDAISHTSPVTLYDCHSMKGNQLWKYRKDKTLYHPVSGSCMDCSES 240

Query: 241 DHRIFMNTCNPSSLTQQWLFEHTNSTVLEKFNRN 274
           DHRIFMNTCNPSSLTQQWLFEHTNSTVLEKFNRN
Sbjct: 241 DHRIFMNTCNPSSLTQQWLFEHTNSTVLEKFNRN 274


>gi|38195091 GalNAc transferase 10 isoform a [Homo sapiens]
          Length = 603

 Score =  547 bits (1409), Expect = e-156
 Identities = 251/255 (98%), Positives = 254/255 (99%)

Query: 20  LAMQVWMCGGRMEDIPCSRVGHIYRKYVPYKVPAGVSLARNLKRVAEVWMDEYAEYIYQR 79
           ++ +VWMCGGRMEDIPCSRVGHIYRKYVPYKVPAGVSLARNLKRVAEVWMDEYAEYIYQR
Sbjct: 349 ISFKVWMCGGRMEDIPCSRVGHIYRKYVPYKVPAGVSLARNLKRVAEVWMDEYAEYIYQR 408

Query: 80  RPEYRHLSAGDVAVQKKLRSSLNCKSFKWFMTKIAWDLPKFYPPVEPPAAAWGEIRNVGT 139
           RPEYRHLSAGDVAVQKKLRSSLNCKSFKWFMTKIAWDLPKFYPPVEPPAAAWGEIRNVGT
Sbjct: 409 RPEYRHLSAGDVAVQKKLRSSLNCKSFKWFMTKIAWDLPKFYPPVEPPAAAWGEIRNVGT 468

Query: 140 GLCADTKHGALGSPLRLEGCVRGRGEAAWNNMQVFTFTWREDIRPGDPQHTKKFCFDAIS 199
           GLCADTKHGALGSPLRLEGCVRGRGEAAWNNMQVFTFTWREDIRPGDPQHTKKFCFDAIS
Sbjct: 469 GLCADTKHGALGSPLRLEGCVRGRGEAAWNNMQVFTFTWREDIRPGDPQHTKKFCFDAIS 528

Query: 200 HTSPVTLYDCHSMKGNQLWKYRKDKTLYHPVSGSCMDCSESDHRIFMNTCNPSSLTQQWL 259
           HTSPVTLYDCHSMKGNQLWKYRKDKTLYHPVSGSCMDCSESDHRIFMNTCNPSSLTQQWL
Sbjct: 529 HTSPVTLYDCHSMKGNQLWKYRKDKTLYHPVSGSCMDCSESDHRIFMNTCNPSSLTQQWL 588

Query: 260 FEHTNSTVLEKFNRN 274
           FEHTNSTVLEKFNRN
Sbjct: 589 FEHTNSTVLEKFNRN 603


>gi|194018457 N-acetylgalactosaminyltransferase-like 6 [Homo
           sapiens]
          Length = 601

 Score =  422 bits (1084), Expect = e-118
 Identities = 183/255 (71%), Positives = 213/255 (83%)

Query: 20  LAMQVWMCGGRMEDIPCSRVGHIYRKYVPYKVPAGVSLARNLKRVAEVWMDEYAEYIYQR 79
           ++ +VWMCGG M D+PCSRVGHIYRKYVPYKVP+G SLARNLKRVAE WMDE+AEYIYQR
Sbjct: 344 ISFKVWMCGGEMFDVPCSRVGHIYRKYVPYKVPSGTSLARNLKRVAETWMDEFAEYIYQR 403

Query: 80  RPEYRHLSAGDVAVQKKLRSSLNCKSFKWFMTKIAWDLPKFYPPVEPPAAAWGEIRNVGT 139
           RPEYRHLS GD++ QK+LR  L CK FKWFM  +AWD+PK+YPPVEPP AAWGEIRNV  
Sbjct: 404 RPEYRHLSTGDISAQKELRKQLKCKDFKWFMAAVAWDVPKYYPPVEPPPAAWGEIRNVAA 463

Query: 140 GLCADTKHGALGSPLRLEGCVRGRGEAAWNNMQVFTFTWREDIRPGDPQHTKKFCFDAIS 199
            LC D+KHGA G+ LRL+ CV+   E  W++ Q+FTF WREDIRPG+P HT+KFCFDAIS
Sbjct: 464 NLCVDSKHGATGTELRLDICVKDGSERTWSHEQLFTFGWREDIRPGEPLHTRKFCFDAIS 523

Query: 200 HTSPVTLYDCHSMKGNQLWKYRKDKTLYHPVSGSCMDCSESDHRIFMNTCNPSSLTQQWL 259
           H SPVTLYDCH MKGNQLW YRKD+TL+HPVS SCMDC+ ++ +IFM  C+P S TQQW+
Sbjct: 524 HNSPVTLYDCHGMKGNQLWGYRKDRTLFHPVSNSCMDCNPAEKKIFMARCDPLSETQQWI 583

Query: 260 FEHTNSTVLEKFNRN 274
           FEH N TVLEKFN +
Sbjct: 584 FEHINMTVLEKFNHH 598


>gi|145309313 UDP-N-acetyl-alpha-D-galactosamine:polypeptide
           N-acetylgalactosaminyltransferase 13 [Homo sapiens]
          Length = 556

 Score =  152 bits (383), Expect = 4e-37
 Identities = 91/250 (36%), Positives = 130/250 (52%), Gaps = 27/250 (10%)

Query: 20  LAMQVWMCGGRMEDIPCSRVGHIYRKYVPYKVPAGVS--LARNLKRVAEVWMDEYAEYIY 77
           ++ ++W CGG +E + CS VGH++RK  PY  P G    + +N +R+AEVWMDE+ ++ Y
Sbjct: 322 MSFRIWQCGGSLEIVTCSHVGHVFRKATPYTFPGGTGHVINKNNRRLAEVWMDEFKDFFY 381

Query: 78  QRRPEYRHLSAGDVAVQKKLRSSLNCKSFKWFMTKIAWDLPKFYPPVEPPAAAW--GEIR 135
              P    +  GDV+V+K LR +L CK F W++  I       YP  + P   +  GEIR
Sbjct: 382 IISPGVVKVDYGDVSVRKTLRENLKCKPFSWYLENI-------YPDSQIPRRYYSLGEIR 434

Query: 136 NVGTGLCADTKHGALGSPLRLEGCVRGRGEAAWNNMQVFTFTWREDIRPGDPQHTKKFCF 195
           NV T  C D         + +  C  G G       QVF++T  ++IR  D       C 
Sbjct: 435 NVETNQCLDNMGRKENEKVGIFNC-HGMG-----GNQVFSYTADKEIRTDD------LCL 482

Query: 196 DAISHTSPVTLYDCHSMKGNQLWKYRKDK-TLYHPVSGSCMD-CSESDHRI-FMNTCNPS 252
           D      PV +  CH M+GNQLW+Y  ++ TL H  S  C+D  SE D  +  M  C+  
Sbjct: 483 DVSRLNGPVIMLKCHHMRGNQLWEYDAERLTLRHVNSNQCLDEPSEEDKMVPTMQDCS-G 541

Query: 253 SLTQQWLFEH 262
           S +QQWL  +
Sbjct: 542 SRSQQWLLRN 551


>gi|157502212 polypeptide N-acetylgalactosaminyltransferase 7 [Homo
           sapiens]
          Length = 657

 Score =  150 bits (380), Expect = 9e-37
 Identities = 91/254 (35%), Positives = 130/254 (51%), Gaps = 20/254 (7%)

Query: 18  FLLAMQVWMCGGRMEDIPCSRVGHIYR----KYVPYKVPAGVS-LARNLKRVAEVWMDEY 72
           F ++ ++W CGG++  +PCSRVGHIYR    +  P  +  G S   +N  RV EVW DEY
Sbjct: 417 FEISYKIWQCGGKLLFVPCSRVGHIYRLEGWQGNPPPIYVGSSPTLKNYVRVVEVWWDEY 476

Query: 73  AEYIYQRRPEYRHLSAGDVAVQKKLRSSLNCKSFKWFMTKIAWDLPKFYPPVEPPAAAWG 132
            +Y Y  RPE + L  GD++  KK R   NCKSFKWFM +IA+D+   Y P+ P    WG
Sbjct: 477 KDYFYASRPESQALPYGDISELKKFREDHNCKSFKWFMEEIAYDITSHY-PLPPKNVDWG 535

Query: 133 EIRNVGTGLCADTKHGALGSPLRLEGCVRGRGEAAWNNMQVFTFTWREDIRPGDPQHTKK 192
           EIR   T  C D+     G  + L  C R  G       Q+F       +   D      
Sbjct: 536 EIRGFETAYCIDSMGKTNGGFVELGPCHRMGGN------QLFRINEANQLMQYDQ----- 584

Query: 193 FCFDAISHTSPVTLYDCHSMKGNQLWKYRKDKTLY-HPVSGSCMDCSESDHRIFMNTCNP 251
            C    +  S V +  C+  +  + W+Y K+   + H  SG C+D SE  H++F++ C+ 
Sbjct: 585 -CLTKGADGSKVMITHCNLNEFKE-WQYFKNLHRFTHIPSGKCLDRSEVLHQVFISNCDS 642

Query: 252 SSLTQQWLFEHTNS 265
           S  TQ+W   + +S
Sbjct: 643 SKTTQKWEMNNIHS 656


>gi|13124891 polypeptide N-acetylgalactosaminyltransferase 1 [Homo
           sapiens]
          Length = 559

 Score =  149 bits (377), Expect = 2e-36
 Identities = 93/259 (35%), Positives = 132/259 (50%), Gaps = 29/259 (11%)

Query: 20  LAMQVWMCGGRMEDIPCSRVGHIYRKYVPYKVPAGVS--LARNLKRVAEVWMDEYAEYIY 77
           ++ ++W CGG +E + CS VGH++RK  PY  P G    + +N +R+AEVWMDE+  + Y
Sbjct: 323 ISFRIWQCGGTLEIVTCSHVGHVFRKATPYTFPGGTGQIINKNNRRLAEVWMDEFKNFFY 382

Query: 78  QRRPEYRHLSAGDVAVQKKLRSSLNCKSFKWFMTKIAWD--LPKFYPPVEPPAAAWGEIR 135
              P    +  GD++ +  LR  L CK F W++  I  D  +P+ Y        + GEIR
Sbjct: 383 IISPGVTKVDYGDISSRVGLRHKLQCKPFSWYLENIYPDSQIPRHY-------FSLGEIR 435

Query: 136 NVGTGLCADTKHGALGSPLRLEGCVRGRGEAAWNNMQVFTFTWREDIRPGDPQHTKKFCF 195
           NV T  C D         + +  C  G G       QVF++T  ++IR  D       C 
Sbjct: 436 NVETNQCLDNMARKENEKVGIFNC-HGMG-----GNQVFSYTANKEIRTDD------LCL 483

Query: 196 DAISHTSPVTLYDCHSMKGNQLWKYRKDK-TLYHPVSGSCMD-CSESDHRI-FMNTCNPS 252
           D      PVT+  CH +KGNQLW+Y   K TL H  S  C+D  +E D ++  +  CN  
Sbjct: 484 DVSKLNGPVTMLKCHHLKGNQLWEYDPVKLTLQHVNSNQCLDKATEEDSQVPSIRDCN-G 542

Query: 253 SLTQQWLFEHTNSTVLEKF 271
           S +QQWL    N T+ E F
Sbjct: 543 SRSQQWLLR--NVTLPEIF 559


>gi|34452725 polypeptide N-acetylgalactosaminyltransferase 4 [Homo
           sapiens]
          Length = 578

 Score =  134 bits (336), Expect = 1e-31
 Identities = 85/254 (33%), Positives = 126/254 (49%), Gaps = 29/254 (11%)

Query: 20  LAMQVWMCGGRMEDIPCSRVGHIYRKYVPYKVPAGVSLARNLKRVAEVWMDEYAEYIYQR 79
           L+ +VW CGG++E  PCS VGH++ K  PY  P   +  +N  R AEVWMDEY E+ Y R
Sbjct: 341 LSFRVWQCGGKLEIHPCSHVGHVFPKRAPYARP---NFLQNTARAAEVWMDEYKEHFYNR 397

Query: 80  RPEYRHLSAGDVAVQKKLRSSLNCKSFKWFMTKIAWDLPKFYPPVEPPAAAW-GEIRNVG 138
            P  R  + GD++ +K LR  L CKSF W++  +    P  + P + P   W G IR+ G
Sbjct: 398 NPPARKEAYGDISERKLLRERLRCKSFDWYLKNV---FPNLHVPEDRP--GWHGAIRSRG 452

Query: 139 -TGLCAD---TKHGALGSPLRLEGCVRGRGEAAWNNMQVFTFTWREDIRPGDPQHTKKFC 194
            +  C D     +   G+ L L GC  G+G       Q F +T  ++IR        + C
Sbjct: 453 ISSECLDYNSPDNNPTGANLSLFGC-HGQG-----GNQFFEYTSNKEIRFNS---VTELC 503

Query: 195 FDAISHTSPVTLYDC----HSMKGNQLWKYRKDKTLYHPVSGSCMDC---SESDHRIFMN 247
            +     + V + +C      +  N +W +++D T++HP SG C+      E    + M 
Sbjct: 504 AEVPEQKNYVGMQNCPKDGFPVPANIIWHFKEDGTIFHPHSGLCLSAYRTPEGRPDVQMR 563

Query: 248 TCNPSSLTQQWLFE 261
           TC+     Q W FE
Sbjct: 564 TCDALDKNQIWSFE 577


>gi|71043692 UDP-N-acetyl-alpha-D-galactosamine:polypeptide
           N-acetylgalactosaminyltransferase-like 1 [Homo sapiens]
          Length = 558

 Score =  131 bits (330), Expect = 6e-31
 Identities = 85/250 (34%), Positives = 120/250 (48%), Gaps = 17/250 (6%)

Query: 18  FLLAMQVWMCGGRMEDIPCSRVGHIYRKYVPYKVPAGVSLA--RNLKRVAEVWMDEYAEY 75
           F L+ +VWMCGG +E +PCSRVGH++RK  PY  P G +L   RN KR AEVWMDEY +Y
Sbjct: 322 FELSFRVWMCGGSLEIVPCSRVGHVFRKRHPYNFPEGNALTYIRNTKRTAEVWMDEYKQY 381

Query: 76  IYQRRPEYRHLSAGDVAVQKKLRSSLNCKSFKWFMTKIAWDLPKFYPPVEPPA-AAWGEI 134
            Y+ RP     + G VA + + R  +NCKSF+W++  +       YP +  P   A   I
Sbjct: 382 YYEARPSAIGKAFGSVATRIEQRKKMNCKSFRWYLENV-------YPELTVPVKEALPGI 434

Query: 135 RNVGTGLCADTKHGALGSPLRLEGCVRGRGEAAWNNMQVFTFTWREDIRPGDPQHTKKFC 194
              G            G  L   G  RG   +A N      + + + +     +      
Sbjct: 435 IKQGVNCLESQGQNTAGDFLLGMGICRG---SAKNPQPAQAWLFSDHLIQQQGKCLAATS 491

Query: 195 FDAISHTSPVTLYDCHSMKGNQLWKYRKDKTLYHPVSGSCMDCSESDHRIFMNTCNPSSL 254
               S  SPV L  C+  +G Q W+ RK   + H VSG C++   +  ++  + C   + 
Sbjct: 492 TLMSSPGSPVILQMCNPREGKQKWR-RKGSFIQHSVSGLCLETKPA--QLVTSKCQADAQ 548

Query: 255 TQQW-LFEHT 263
            QQW L  HT
Sbjct: 549 AQQWQLLPHT 558


>gi|60498976 N-acetylgalactosaminyltransferase 14 [Homo sapiens]
          Length = 552

 Score =  127 bits (319), Expect = 1e-29
 Identities = 84/254 (33%), Positives = 124/254 (48%), Gaps = 29/254 (11%)

Query: 18  FLLAMQVWMCGGRMEDIPCSRVGHIYRKYVPYKVPAGVS--LARNLKRVAEVWMDEYAEY 75
           F ++ +VWMCGG +E +PCSRVGH++RK  PY  P G +    +N KR AEVWMDEY +Y
Sbjct: 310 FEISFRVWMCGGSLEIVPCSRVGHVFRKKHPYVFPDGNANTYIKNTKRTAEVWMDEYKQY 369

Query: 76  IYQRRPEYRHLSAGDVAVQKKLRSSLNCKSFKWFMTKIAWDLPKFYPPVEPP---AAAWG 132
            Y  RP       G+V  +  LR +L C+SFKW++  I       YP +  P   +   G
Sbjct: 370 YYAARPFALERPFGNVESRLDLRKNLRCQSFKWYLENI-------YPELSIPKESSIQKG 422

Query: 133 EIRNVGTGLCADTKHGALGSPLRLEGCVRGRGEAAWNNMQVFTFTWREDIRPGDPQHTKK 192
            IR     L +  ++      L+L  C + +GE A    QV+ FT+ + I        ++
Sbjct: 423 NIRQRQKCLESQRQNNQETPNLKLSPCAKVKGEDA--KSQVWAFTYTQQIL------QEE 474

Query: 193 FCFDAIS--HTSPVTLYDCHSMKGNQLWKYRKDKTLYHPVSGSCMDC------SESDHRI 244
            C   I+    +PV L  C +    Q W  +    + H  S  C+D       +E+   I
Sbjct: 475 LCLSVITLFPGAPVVLVLCKNGDDRQQWT-KTGSHIEHIASHLCLDTDMFGDGTENGKEI 533

Query: 245 FMNTCNPSSLTQQW 258
            +N C  S ++Q W
Sbjct: 534 VVNPCESSLMSQHW 547


>gi|115298684 polypeptide N-acetylgalactosaminyltransferase 6 [Homo
           sapiens]
          Length = 622

 Score =  126 bits (317), Expect = 2e-29
 Identities = 83/253 (32%), Positives = 132/253 (52%), Gaps = 29/253 (11%)

Query: 20  LAMQVWMCGGRMEDIPCSRVGHIYRKYVPYKVPAGVS-LARNLKRVAEVWMDEYAEYIYQ 78
           ++ +VW CGG++E IPCS VGH++R   P+  P G S +ARN  R+AEVWMD Y +  Y+
Sbjct: 386 MSFRVWQCGGQLEIIPCSVVGHVFRTKSPHTFPKGTSVIARNQVRLAEVWMDSYKKIFYR 445

Query: 79  RRPEYRHL----SAGDVAVQKKLRSSLNCKSFKWFMTKIAWDLPKFYPPVEPPAAAWGEI 134
           R  +   +    S GD++ + +LR  L+C +F W++  +  ++  F P + P    +G I
Sbjct: 446 RNLQAAKMAQEKSFGDISERLQLREQLHCHNFSWYLHNVYPEM--FVPDLTP--TFYGAI 501

Query: 135 RNVGTGLCADT-KHGALGSPLRLEGCVRGRGEAAWNNMQVFTFTWREDIRPGDPQHTKKF 193
           +N+GT  C D  ++   G PL +  C  G G       Q F +T + D+R       K+ 
Sbjct: 502 KNLGTNQCLDVGENNRGGKPLIMYSC-HGLG-----GNQYFEYTTQRDLR---HNIAKQL 552

Query: 194 CFDAISHTSPVTLYDCH-SMKGNQL-----WKYRKDKTLYHPVSGSCMDCSESDHRIFMN 247
           C         + L  CH + K +Q+     W+  +D+ + +  SG+C+  +  D +  M 
Sbjct: 553 CLHV--SKGALGLGSCHFTGKNSQVPKDEEWELAQDQLIRNSGSGTCL--TSQDKKPAMA 608

Query: 248 TCNPSSLTQQWLF 260
            CNPS   Q WLF
Sbjct: 609 PCNPSDPHQLWLF 621


>gi|153266878 polypeptide N-acetylgalactosaminyltransferase 3 [Homo
           sapiens]
          Length = 633

 Score =  126 bits (316), Expect = 2e-29
 Identities = 81/255 (31%), Positives = 131/255 (51%), Gaps = 25/255 (9%)

Query: 20  LAMQVWMCGGRMEDIPCSRVGHIYRKYVPYKVPAGVS-LARNLKRVAEVWMDEYAEYIYQ 78
           ++ +VW CGG++E +PCS VGH++R   P+  P G   +ARN  R+AEVWMDEY E  Y+
Sbjct: 394 MSFRVWQCGGQLEIMPCSVVGHVFRSKSPHSFPKGTQVIARNQVRLAEVWMDEYKEIFYR 453

Query: 79  RRPE----YRHLSAGDVAVQKKLRSSLNCKSFKWFMTKIAWDLPKFYPPVEPPAAAWGEI 134
           R  +     +  + GD++ + +++  L CK+F W++  I    P+ Y P   P  + G I
Sbjct: 454 RNTDAAKIVKQKAFGDLSKRFEIKHRLQCKNFTWYLNNI---YPEVYVPDLNPVIS-GYI 509

Query: 135 RNVGTGLCADT-KHGALGSPLRLEGCVRGRGEAAWNNMQVFTFTWREDIRPGDPQHTKKF 193
           ++VG  LC D  ++   G PL +  C  G G       Q F ++ + +IR       K+ 
Sbjct: 510 KSVGQPLCLDVGENNQGGKPLIMYTC-HGLG-----GNQYFEYSAQHEIR---HNIQKEL 560

Query: 194 CFDAISHTSPV--TLYDCHS--MKGNQLWKYRKDKTLYHPVSGSCMDCSESDHRIFMNTC 249
           C  A      +    Y  H   + G Q+W+ +KD+ LY+P    C+  S +     + +C
Sbjct: 561 CLHAAQGLVQLKACTYKGHKTVVTGEQIWEIQKDQLLYNPFLKMCL--SANGEHPSLVSC 618

Query: 250 NPSSLTQQWLFEHTN 264
           NPS   Q+W+    +
Sbjct: 619 NPSDPLQKWILSQND 633


>gi|190014583 UDP-N-acetyl-alpha-D-galactosamine:polypeptide
           N-acetylgalactosaminyltransferase-like 2 [Homo sapiens]
          Length = 639

 Score =  124 bits (311), Expect = 9e-29
 Identities = 81/257 (31%), Positives = 126/257 (49%), Gaps = 28/257 (10%)

Query: 20  LAMQVWMCGGRMEDIPCSRVGHIYRKYVPYKVPAGVSLARNLKRVAEVWMDEYAEYIYQR 79
           L+ + W+CGG +E +PCSRVGHIY+    +      +  RN  R+AE W+  + E  Y+ 
Sbjct: 396 LSFKAWLCGGSVEILPCSRVGHIYQNQDSHSPLDQEATLRNRVRIAETWLGSFKETFYKH 455

Query: 80  RPEYRHLSAG---DVAVQKKLRSSLNCKSFKWFMTKIAWDLPKFYPPVEPPAAAWGEIRN 136
            PE   LS     D   + +L+  L C++F WF+  +    P+ YP  EP  +  G++ N
Sbjct: 456 SPEAFSLSKAEKPDCMERLQLQRRLGCRTFHWFLANV---YPELYPS-EPRPSFSGKLHN 511

Query: 137 VGTGLCAD--TKHGALGSPLRLEGCVRGRGEAAWNNMQVFTFTWREDIRPGDPQHTKKFC 194
            G GLCAD   +   LG P+ L  C   R        Q    T R++I  G PQH    C
Sbjct: 512 TGLGLCADCQAEGDILGCPMVLAPCSDSR------QQQYLQHTSRKEIHFGSPQH---LC 562

Query: 195 FDAISHTSPVTLYDCHSMKG----NQLWKYRKDKTLYHPVSGSCMDC--SESDHRIFMNT 248
           F        V L +C + +G     Q W ++++  + H +SG CM+    E++  +++  
Sbjct: 563 FAV--RQEQVILQNC-TEEGLAIHQQHWDFQENGMIVHILSGKCMEAVVQENNKDLYLRP 619

Query: 249 CNPSSLTQQWLFEHTNS 265
           C+     QQW F+  N+
Sbjct: 620 CD-GKARQQWRFDQINA 635


>gi|32698686 N-acetylgalactosaminyltransferase 5 [Homo sapiens]
          Length = 940

 Score =  122 bits (306), Expect = 3e-28
 Identities = 82/257 (31%), Positives = 122/257 (47%), Gaps = 38/257 (14%)

Query: 20  LAMQVWMCGGRMEDIPCSRVGHIYRKYVPYKVPAG--VSLARNLKRVAEVWMDEYAEYIY 77
           L+ +VWMCGG +E IPCSRVGHI+R   PY  P     ++ RNL RVAEVW+DEY E  Y
Sbjct: 702 LSFKVWMCGGEIEIIPCSRVGHIFRNDNPYSFPKDRMKTVERNLVRVAEVWLDEYKELFY 761

Query: 78  QRRPEY--RHLSAGDVAVQKKLRSSLNCKSFKWFMTKIAWDLPKFYPPVEPPAAAWGEIR 135
                   + L  G++  Q++LR  L CKSFKW++  +  DL        P   A G + 
Sbjct: 762 GHGDHLIDQGLDVGNLTQQRELRKKLKCKSFKWYLENVFPDLR------APIVRASGVLI 815

Query: 136 NVGTGLCADTKHGALGSPLRLEGCVRGRGEAAWNNMQVFTFTWREDIRPGDPQHTKKFCF 195
           NV  G C   ++    + + LE C   +       +Q F +TW   I+ G+      +C 
Sbjct: 816 NVALGKCISIEN----TTVILEDCDGSK------ELQQFNYTWLRLIKCGE------WCI 859

Query: 196 DAISHTSPVTLYDCHSMKGNQLWKYRKDKTLYHPVSGS-----------CMDCSESDHRI 244
             I     V L+ C +      W + K  +++HP   +           C++ + S   +
Sbjct: 860 APIPDKGAVRLHPCDNRNKGLKWLH-KSTSVFHPELVNHIVFENNQQLLCLEGNFSQKIL 918

Query: 245 FMNTCNPSSLTQQWLFE 261
            +  C+P    Q+W FE
Sbjct: 919 KVAACDPVKPYQKWKFE 935


>gi|4758412 polypeptide N-acetylgalactosaminyltransferase 2 [Homo
           sapiens]
          Length = 571

 Score =  115 bits (289), Expect = 3e-26
 Identities = 77/250 (30%), Positives = 115/250 (46%), Gaps = 31/250 (12%)

Query: 20  LAMQVWMCGGRMEDIPCSRVGHIYRKYVPYKVP--AGVSLARNLKRVAEVWMDEYAEYIY 77
           ++ +VW CGG +E IPCSRVGH++RK  PY  P  +G   ARN +R AEVWMDEY  + Y
Sbjct: 338 ISFRVWQCGGSLEIIPCSRVGHVFRKQHPYTFPGGSGTVFARNTRRAAEVWMDEYKNFYY 397

Query: 78  QRRPEYRHLSAGDVAVQKKLRSSLNCKSFKWFMTKIAWDLPKFYPPVEPP---AAAWGEI 134
              P  R++  G++  + +LR  L+CK FKW++  +       YP +  P     A+G +
Sbjct: 398 AAVPSARNVPYGNIQSRLELRKKLSCKPFKWYLENV-------YPELRVPDHQDIAFGAL 450

Query: 135 RNVGTGLCADTKHGALGSPLRLEGCVRGRGEAAWNNMQVFTFTWREDIRPGDPQHTKKFC 194
           +  GT  C DT        + +  C    G   W        T  + ++  D       C
Sbjct: 451 QQ-GTN-CLDTLGHFADGVVGVYECHNAGGNQEW------ALTKEKSVKHMD------LC 496

Query: 195 FDAISHT--SPVTLYDCHSMKGNQLW-KYRKDKTLYHPVSGSCMDC-SESDHRIFMNTCN 250
              +     S + L  C      Q W +   +  L H  S  C+D  +     + +  C 
Sbjct: 497 LTVVDRAPGSLIKLQGCRENDSRQKWEQIEGNSKLRHVGSNLCLDSRTAKSGGLSVEVCG 556

Query: 251 PSSLTQQWLF 260
           P +L+QQW F
Sbjct: 557 P-ALSQQWKF 565


>gi|153792095 N-acetylgalactosaminyltransferase 11 [Homo sapiens]
          Length = 608

 Score =  115 bits (287), Expect = 5e-26
 Identities = 79/261 (30%), Positives = 121/261 (46%), Gaps = 29/261 (11%)

Query: 20  LAMQVWMCGGRMEDIPCSRVGHIYRKYVPYKVPAGV-SLARNLKRVAEVWMDEYAEYIYQ 78
           ++ ++WMCGG++  IPCSRVGHI+RK  PY  P G  ++  N  R+A VW+DEY E  + 
Sbjct: 357 ISFRIWMCGGKLFIIPCSRVGHIFRKRRPYGSPEGQDTMTHNSLRLAHVWLDEYKEQYFS 416

Query: 79  RRPEYRHLSAGDVAVQKKLRSSLNCKSFKWFMTKIAWDL-----------PKFY--PPVE 125
            RP+ +  S G+++ + +LR  L CKSFKW++  +  ++           P F    P  
Sbjct: 417 LRPDLKTKSYGNISERVELRKKLGCKSFKWYLDNVYPEMQISGSHAKPQQPIFVNRGPKR 476

Query: 126 PPAAAWGEIRNVGTGLCADTKHGALGSPLRLEGCVRGRGEAAWNNMQVFTFTWREDIRPG 185
           P     G + ++ T  C      A G P +  G V  +     +  Q++ +    ++   
Sbjct: 477 PKVLQRGRLYHLQTNKCL----VAQGRPSQKGGLVVLKACDYSDPNQIWIYNEEHEL--- 529

Query: 186 DPQHTKKFCFDAISHTS--PVTLYDCHSMKGNQLWKYRKDKTLYHPVSGSCM---DCSES 240
                   C D     S  P  L  CH   G+Q W + K+  LY    G C+   D    
Sbjct: 530 --VLNSLLCLDMSETRSSDPPRLMKCHGSGGSQQWTFGKNNRLYQVSVGQCLRAVDPLGQ 587

Query: 241 DHRIFMNTCNPSSLTQQWLFE 261
              + M  C+ SS +QQW  E
Sbjct: 588 KGSVAMAICDGSS-SQQWHLE 607


>gi|112807221 N-acetylgalactosaminyltransferase 12 [Homo sapiens]
          Length = 581

 Score =  107 bits (266), Expect = 1e-23
 Identities = 75/245 (30%), Positives = 117/245 (47%), Gaps = 37/245 (15%)

Query: 21  AMQVWMCGGRMEDIPCSRVGHIYRKYVPYKVPAGVSLARNLKRVAEVWMDEYAEYIYQRR 80
           + ++W CGG +E  PCS VGH++ K  PY     ++   N  R AEVWMDE+ E  Y R 
Sbjct: 343 SFRIWQCGGVLETHPCSHVGHVFPKQAPYSRNKALA---NSVRAAEVWMDEFKELYYHRN 399

Query: 81  PEYRHLSAGDVAVQKKLRSSLNCKSFKWFMTKIAWDLPKFYPPVEPPAAAWGEIRNVG-T 139
           P  R    GDV  +K+LR  L CK FKWF+  +    P+ + P + P   +G ++N G T
Sbjct: 400 PRARLEPFGDVTERKQLRDKLQCKDFKWFLETV---YPELHVPEDRP-GFFGMLQNKGLT 455

Query: 140 GLCAD----TKHGALGSPLRLEGCVRGRGEAAWNNMQVFTFTWREDIRPGDPQHTKKFCF 195
             C D     ++  +G  + L  C  G G+      Q F +T +++IR     H  + C 
Sbjct: 456 DYCFDYNPPDENQIVGHQVILYLC-HGMGQ-----NQFFEYTSQKEIRYN--THQPEGCI 507

Query: 196 DAISHTSPVTLYDC-HSMKGNQLWKYRKDKTLYHPVSGSCM----------------DCS 238
              +    + ++ C  +   NQ +  ++D +L+H  S  C+                DC+
Sbjct: 508 AVEAGMDTLIMHLCEETAPENQKFILQEDGSLFHEQSKKCVQAARKESSDSFVPLLRDCT 567

Query: 239 ESDHR 243
            SDH+
Sbjct: 568 NSDHQ 572


>gi|22538495 UDP-GalNAc:polypeptide
           N-acetylgalactosaminyltransferase-like 3 [Homo sapiens]
          Length = 598

 Score = 99.0 bits (245), Expect = 4e-21
 Identities = 50/120 (41%), Positives = 72/120 (60%), Gaps = 8/120 (6%)

Query: 20  LAMQVWMCGGRMEDIPCSRVGHIYRKYVPYKVPAGVSLARNLKRVAEVWMDEYAEYIY-- 77
           L ++VW+CGG ME +PCSRV HI RK  PY    G    RN  RVAEVWMD+Y  ++Y  
Sbjct: 357 LGIKVWLCGGSMEVLPCSRVAHIERKKKPYNSNIGFYTKRNALRVAEVWMDDYKSHVYIA 416

Query: 78  -QRRPEYRHLSAGDVAVQKKLRSSLNCKSFKWFMTKIAWDLPKFYPPVEPPAAAWGEIRN 136
                E   +  GDV+ ++ LR SL CK+F+W++  +  ++ ++   V     A+GE+RN
Sbjct: 417 WNLPLENPGIDIGDVSERRALRKSLKCKNFQWYLDHVYPEMRRYNNTV-----AYGELRN 471


>gi|222446618 UDP-N-acetyl-alpha-D-galactosamine:polypeptide
           N-acetylgalactosaminyltransferase-like 4 [Homo sapiens]
          Length = 607

 Score = 93.2 bits (230), Expect = 2e-19
 Identities = 47/129 (36%), Positives = 73/129 (56%), Gaps = 9/129 (6%)

Query: 20  LAMQVWMCGGRMEDIPCSRVGHIYRKYVPYKVPAGVSLARNLKRVAEVWMDEYAEYIYQR 79
           L ++VW CGG +E +PCSR+ HI R + PY       + RN  RVAEVWMDE+  ++Y  
Sbjct: 361 LGIRVWQCGGSVEVLPCSRIAHIERAHKPYTEDLTAHVRRNALRVAEVWMDEFKSHVYMA 420

Query: 80  ---RPEYRHLSAGDVAVQKKLRSSLNCKSFKWFMTKIAWDLPKFYPPVEPPAAAWGEIRN 136
                E   +  GD+  +K LR  L CK+F+W++  +  ++ + Y  +     A+G ++N
Sbjct: 421 WNIPQEDSGIDIGDITARKALRKQLQCKTFRWYLVSVYPEM-RMYSDI----IAYGVLQN 475

Query: 137 -VGTGLCAD 144
            + T LC D
Sbjct: 476 SLKTDLCLD 484


>gi|8393412 polypeptide N-acetylgalactosaminyltransferase 8 [Homo
           sapiens]
          Length = 637

 Score = 90.1 bits (222), Expect = 2e-18
 Identities = 63/258 (24%), Positives = 116/258 (44%), Gaps = 32/258 (12%)

Query: 20  LAMQVWMCGGRMEDIPCSRVGHIYRKYVPYKVPAGVSLARNLKRVAEVWMDEYAEYIY-- 77
           L+++VW CGG++E +PCSR+ H+ R + PY +    +L RN  RVAE+WMDE+   +Y  
Sbjct: 388 LSLRVWQCGGKVEILPCSRIAHLERHHKPYALDLTAALKRNALRVAEIWMDEHKHMVYLA 447

Query: 78  -QRRPEYRHLSAGDVAVQKKLRSSLNCKSFKWFMTKIAWDLPKFYPPVEP--PAAAWGEI 134
                +   +  GDV+ +  LR  L CK+F W++  +       YP ++P      +G +
Sbjct: 448 WNIPLQNSGIDFGDVSSRMALREKLKCKTFDWYLKNV-------YPLLKPLHTIVGYGRM 500

Query: 135 RN-VGTGLCADTKHGALGSPLRLEGCVRGRGEAAWNNM--QVFTFTWREDIRPGDPQHTK 191
           +N +   +C D       +P+ +  C     +  + ++  +++      +    D     
Sbjct: 501 KNLLDENVCLDQGPVPGNTPI-MYYCHEFSSQNVYYHLTGELYVGQLIAEASASDR---- 555

Query: 192 KFCFDAISHTSPVTLYDCHSMKGNQL---WKYRKDKTLYHPVSGSCMDCSE---SDHRIF 245
             C          TL  C     N+L   W ++    + +  +  C++  +     H + 
Sbjct: 556 --CLTDPGKAEKPTLEPCSKAAKNRLHIYWDFKPGGAVINRDTKRCLEMKKDLLGSHVLV 613

Query: 246 MNTCNPSSLTQQWLFEHT 263
           + TC+    TQ W  +HT
Sbjct: 614 LQTCS----TQVWEIQHT 627


>gi|21686971 UDP-N-acetyl-alpha-D-galactosamine:polypeptide
           N-acetylgalactosaminyltransferase-like 5 [Homo sapiens]
          Length = 443

 Score = 86.7 bits (213), Expect = 2e-17
 Identities = 35/94 (37%), Positives = 60/94 (63%)

Query: 20  LAMQVWMCGGRMEDIPCSRVGHIYRKYVPYKVPAGVSLARNLKRVAEVWMDEYAEYIYQR 79
           L++++WMCGG++  IPCSRVGHI +K          ++  N  R+  VW+DEY E  + R
Sbjct: 339 LSLRIWMCGGQLFIIPCSRVGHISKKQTGKPSTIISAMTHNYLRLVHVWLDEYKEQFFLR 398

Query: 80  RPEYRHLSAGDVAVQKKLRSSLNCKSFKWFMTKI 113
           +P  ++++ G++  + +LR  L CKSF+W++  +
Sbjct: 399 KPGLKYVTYGNIRERVELRKRLGCKSFQWYLDNV 432


>gi|169790926 UDP-N-acetyl-alpha-D-galactosamine:polypeptide
           N-acetylgalactosaminyltransferase 9 isoform A [Homo
           sapiens]
          Length = 603

 Score = 85.1 bits (209), Expect = 6e-17
 Identities = 47/122 (38%), Positives = 62/122 (50%), Gaps = 12/122 (9%)

Query: 20  LAMQVWMCGGRMEDIPCSRVGHIYRKYVPYKVPAGVSLARNLKRVAEVWMDEYAEYIYQR 79
           L M+VW CGG ME +PCSRV HI R   PY         RN  R AEVWMD++  ++Y  
Sbjct: 356 LGMRVWQCGGSMEVLPCSRVAHIERTRKPYNNDIDYYAKRNALRAAEVWMDDFKSHVYMA 415

Query: 80  ---RPEYRHLSAGDVAVQKKLRSSLNCKSFKWFMTKIAWDLPKFYPP--VEPPAAAWGEI 134
                    +  GDV+ +  LR  L C+SFKW++  +       YP   V      +GE+
Sbjct: 416 WNIPMSNPGVDFGDVSERLALRQRLKCRSFKWYLENV-------YPEMRVYNNTLTYGEV 468

Query: 135 RN 136
           RN
Sbjct: 469 RN 470


>gi|38327556 UDP-N-acetyl-alpha-D-galactosamine:polypeptide
           N-acetylgalactosaminyltransferase 9 isoform B [Homo
           sapiens]
          Length = 237

 Score = 67.8 bits (164), Expect = 1e-11
 Identities = 40/111 (36%), Positives = 54/111 (48%), Gaps = 12/111 (10%)

Query: 31  MEDIPCSRVGHIYRKYVPYKVPAGVSLARNLKRVAEVWMDEYAEYIYQR---RPEYRHLS 87
           ME +PCSRV HI R   PY         RN  R AEVWMD++  ++Y           + 
Sbjct: 1   MEVLPCSRVAHIERTRKPYNNDIDYYAKRNALRAAEVWMDDFKSHVYMAWNIPMSNPGVD 60

Query: 88  AGDVAVQKKLRSSLNCKSFKWFMTKIAWDLPKFYPP--VEPPAAAWGEIRN 136
            GDV+ +  LR  L C+SFKW++  +       YP   V      +GE+RN
Sbjct: 61  FGDVSERLALRQRLKCRSFKWYLENV-------YPEMRVYNNTLTYGEVRN 104


>gi|8922631 exonuclease 3'-5' domain containing 2 [Homo sapiens]
          Length = 496

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 10/30 (33%), Positives = 17/30 (56%)

Query: 245 FMNTCNPSSLTQQWLFEHTNSTVLEKFNRN 274
           F+++  P  L QQW  +H +  +L KF  +
Sbjct: 461 FLDSMQPKHLPQQWSVDHNHQKLLRKFGED 490


>gi|22035558 transcription initiation factor IIIB isoform 3 [Homo
           sapiens]
          Length = 473

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)

Query: 65  AEVWMDEYAEYI-YQRRPEYRHLSAGDVAVQKKLRSSLNCK 104
           AE+WM E AEY+  QR  E R     ++ + K+ +   +CK
Sbjct: 267 AELWMRENAEYLREQREKEARIAKEKELGIYKEHKPKKSCK 307


>gi|22035556 transcription initiation factor IIIB isoform 1 [Homo
           sapiens]
          Length = 677

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)

Query: 65  AEVWMDEYAEYI-YQRRPEYRHLSAGDVAVQKKLRSSLNCK 104
           AE+WM E AEY+  QR  E R     ++ + K+ +   +CK
Sbjct: 471 AELWMRENAEYLREQREKEARIAKEKELGIYKEHKPKKSCK 511


>gi|10834994 interleukin 11 precursor [Homo sapiens]
          Length = 199

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 10/42 (23%)

Query: 122 PPVEPPAAAWGEIRNVGTGLCADTKHGALGS-PLRLEGCVRG 162
           PP+ PP++AWG IR           H  LG   L L+  VRG
Sbjct: 159 PPLAPPSSAWGGIR---------AAHAILGGLHLTLDWAVRG 191


>gi|7656861 a disintegrin and metalloprotease domain 18
           preproprotein [Homo sapiens]
          Length = 739

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 6/58 (10%)

Query: 41  HIYRKYVPYKVPAGVSLARNLKRVAEVWMDEYAE-YIYQRRPEYRHLSAGDVAVQKKL 97
           HI++K  PYKVP   S  +NL ++    + +Y E YI   +  Y ++ +  +AV +K+
Sbjct: 159 HIWQKDQPYKVPLN-SQIKNLSKL----LPQYLEIYIIVEKALYDYMGSEMMAVTQKI 211


>gi|144446030 lymphocyte antigen 75 [Homo sapiens]
          Length = 1722

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 4/57 (7%)

Query: 208 DCHSMKGNQLWKYRKDKTLYHPVSGSC--MDCSESDHRIFMNTCNPSSLTQQWLFEH 262
           DC   + ++LWK+     L+H  S  C  +D ++S + + M +C+ S++   W  EH
Sbjct: 58  DCDETE-DKLWKWVSQHRLFHLHSQKCLGLDITKSVNELRMFSCDSSAML-WWKCEH 112


>gi|61676197 zinc finger protein 440 like [Homo sapiens]
          Length = 397

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 59 RNLKRVAEVWMDEYAEYIYQR-RPEYRHLSAGDV 91
          RNL  + + W D+  EY YQ  R  +R L  G+V
Sbjct: 41 RNLTSIGKKWKDQNIEYEYQNPRRNFRSLIEGNV 74


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.135    0.449 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,975,163
Number of Sequences: 37866
Number of extensions: 558145
Number of successful extensions: 1089
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1014
Number of HSP's gapped (non-prelim): 31
length of query: 274
length of database: 18,247,518
effective HSP length: 101
effective length of query: 173
effective length of database: 14,423,052
effective search space: 2495187996
effective search space used: 2495187996
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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