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Search of human proteins with 38176151
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|38176151 Lunapark [Homo sapiens]
(428 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|38176151 Lunapark [Homo sapiens] 863 0.0
gi|157168329 formin 1 [Homo sapiens] 50 4e-06
gi|23592228 extraembryonic, spermatogenesis, homeobox 1-like [Ho... 48 1e-05
gi|4508017 zinc finger protein 207 isoform a [Homo sapiens] 47 4e-05
gi|7706501 WW domain binding protein 11 [Homo sapiens] 46 7e-05
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 45 1e-04
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 45 1e-04
gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens] 45 1e-04
gi|18079216 CASK interacting protein 1 [Homo sapiens] 45 2e-04
gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Hom... 45 2e-04
gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Hom... 45 2e-04
gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo sap... 45 2e-04
gi|239582763 ral guanine nucleotide dissociation stimulator-like... 45 2e-04
gi|153792074 proline rich 12 [Homo sapiens] 45 2e-04
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 44 4e-04
gi|4504465 homeobox B2 [Homo sapiens] 43 6e-04
gi|223972704 hypothetical protein LOC284418 [Homo sapiens] 42 8e-04
gi|221139926 NHS-like 1 [Homo sapiens] 42 0.001
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ... 42 0.001
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 42 0.001
gi|19923345 RNA binding motif protein 12 [Homo sapiens] 42 0.001
gi|23510462 RNA binding motif protein 12 [Homo sapiens] 42 0.001
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 42 0.001
gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 42 0.001
gi|11415052 retinoid X receptor, beta [Homo sapiens] 42 0.001
gi|149999378 inverted formin 2 isoform 2 [Homo sapiens] 42 0.001
gi|149999380 inverted formin 2 isoform 1 [Homo sapiens] 42 0.001
gi|40807447 papillary renal cell carcinoma translocation-associa... 42 0.001
gi|40807450 papillary renal cell carcinoma translocation-associa... 42 0.001
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 41 0.002
>gi|38176151 Lunapark [Homo sapiens]
Length = 428
Score = 863 bits (2230), Expect = 0.0
Identities = 428/428 (100%), Positives = 428/428 (100%)
Query: 1 MGGLFSRWRTKPSTVEVLESIDKEIQALEEFREKNQRLQKLWVGRLILYSSVLYLFTCLI 60
MGGLFSRWRTKPSTVEVLESIDKEIQALEEFREKNQRLQKLWVGRLILYSSVLYLFTCLI
Sbjct: 1 MGGLFSRWRTKPSTVEVLESIDKEIQALEEFREKNQRLQKLWVGRLILYSSVLYLFTCLI 60
Query: 61 VYLWYLPDEFTARLAMTLPFFAFPLIIWSIRTVIIFFFSKRTERNNEALDDLKSQRKKIL 120
VYLWYLPDEFTARLAMTLPFFAFPLIIWSIRTVIIFFFSKRTERNNEALDDLKSQRKKIL
Sbjct: 61 VYLWYLPDEFTARLAMTLPFFAFPLIIWSIRTVIIFFFSKRTERNNEALDDLKSQRKKIL 120
Query: 121 EEVMEKETYKTAKLILERFDPDSKKAKECEPPSAGAAVTARPGQEIRQRTAAQRNLSPTP 180
EEVMEKETYKTAKLILERFDPDSKKAKECEPPSAGAAVTARPGQEIRQRTAAQRNLSPTP
Sbjct: 121 EEVMEKETYKTAKLILERFDPDSKKAKECEPPSAGAAVTARPGQEIRQRTAAQRNLSPTP 180
Query: 181 ASPNQGPPPQVPVSPGPPKDSSAPGGPPERTVTPALSSNVLPRHLGSPATSVPGMGLHPP 240
ASPNQGPPPQVPVSPGPPKDSSAPGGPPERTVTPALSSNVLPRHLGSPATSVPGMGLHPP
Sbjct: 181 ASPNQGPPPQVPVSPGPPKDSSAPGGPPERTVTPALSSNVLPRHLGSPATSVPGMGLHPP 240
Query: 241 GPPLARPILPRERGALDRIVEYLVGDGPQNRYALICQQCFSHNGMALKEEFEYIAFRCAY 300
GPPLARPILPRERGALDRIVEYLVGDGPQNRYALICQQCFSHNGMALKEEFEYIAFRCAY
Sbjct: 241 GPPLARPILPRERGALDRIVEYLVGDGPQNRYALICQQCFSHNGMALKEEFEYIAFRCAY 300
Query: 301 CFFLNPARKTRPQAPRLPEFSFEKRQVVEGSSSVGPLPSGSVLSSDNQFNEESLEHDVLD 360
CFFLNPARKTRPQAPRLPEFSFEKRQVVEGSSSVGPLPSGSVLSSDNQFNEESLEHDVLD
Sbjct: 301 CFFLNPARKTRPQAPRLPEFSFEKRQVVEGSSSVGPLPSGSVLSSDNQFNEESLEHDVLD 360
Query: 361 DNTEQTDDKIPATEQTNQVIEKASDSEEPEEKQETENEEASVIETNSTVPGADSIPDPEL 420
DNTEQTDDKIPATEQTNQVIEKASDSEEPEEKQETENEEASVIETNSTVPGADSIPDPEL
Sbjct: 361 DNTEQTDDKIPATEQTNQVIEKASDSEEPEEKQETENEEASVIETNSTVPGADSIPDPEL 420
Query: 421 SGESLTAE 428
SGESLTAE
Sbjct: 421 SGESLTAE 428
>gi|157168329 formin 1 [Homo sapiens]
Length = 1196
Score = 50.1 bits (118), Expect = 4e-06
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 175 NLSPTPASP--NQGPPPQVPVSPGPPKDSSAPGGPPERTVTPALSSNVLPRHLGSPATSV 232
+LSP P P + GPP P P PP + GPP P L ++ P + G P +
Sbjct: 664 SLSPAPPMPPVSAGPPLPPPPPPPPPLPPPSSAGPPPPPPPPPLPNSPAPPNPGGPPPAP 723
Query: 233 PGMGLHPPGPP 243
P GL PP PP
Sbjct: 724 PPPGLAPPPPP 734
Score = 31.6 bits (70), Expect = 1.4
Identities = 18/62 (29%), Positives = 22/62 (35%)
Query: 187 PPPQVPVSPGPPKDSSAPGGPPERTVTPALSSNVLPRHLGSPATSVPGMGLHPPGPPLAR 246
PPP + P PP S P + P + LP P P PP PP
Sbjct: 646 PPPPASIPPPPPLPSGLGSLSPAPPMPPVSAGPPLPPPPPPPPPLPPPSSAGPPPPPPPP 705
Query: 247 PI 248
P+
Sbjct: 706 PL 707
Score = 30.8 bits (68), Expect = 2.5
Identities = 19/48 (39%), Positives = 21/48 (43%), Gaps = 5/48 (10%)
Query: 176 LSPTPASPNQGPPPQVPVSPGPPKDSSAPGGPPERTVTPALSSNVLPR 223
L +PA PN G PP P PP AP PP SS+ PR
Sbjct: 707 LPNSPAPPNPGGPP-----PAPPPPGLAPPPPPGLFFGLGSSSSQCPR 749
>gi|23592228 extraembryonic, spermatogenesis, homeobox 1-like [Homo
sapiens]
Length = 406
Score = 48.1 bits (113), Expect = 1e-05
Identities = 33/83 (39%), Positives = 39/83 (46%), Gaps = 11/83 (13%)
Query: 176 LSPTPASPNQGP----PPQVPVSPGPPKDSSAPGGPPERTVTPALSSNVLPRHLGSPATS 231
++P P P P PP PV PGPP + P GPP V P LP G P
Sbjct: 300 MAPVPPWPPMAPVPTGPPMAPVPPGPPM-ARVPPGPPMARVPPGPPMAPLPP--GPPMAP 356
Query: 232 VPG---MGLHPPGPPLARPILPR 251
+P M PPGPP+A P+ PR
Sbjct: 357 LPPGPPMAPLPPGPPMA-PLPPR 378
Score = 44.7 bits (104), Expect = 2e-04
Identities = 31/82 (37%), Positives = 37/82 (45%), Gaps = 11/82 (13%)
Query: 176 LSPTPASPNQGP----PPQVPVSPGPPKDSSAPGGPPERTVTPALSSNVLPRHLGSPATS 231
++P P P P PP PV P PP + P GPP V P +P G P
Sbjct: 282 MAPVPPGPRMAPVPPWPPMAPVPPWPPM-APVPTGPPMAPVPPGPPMARVPP--GPPMAR 338
Query: 232 V---PGMGLHPPGPPLARPILP 250
V P M PPGPP+A P+ P
Sbjct: 339 VPPGPPMAPLPPGPPMA-PLPP 359
Score = 43.9 bits (102), Expect = 3e-04
Identities = 28/79 (35%), Positives = 34/79 (43%), Gaps = 5/79 (6%)
Query: 176 LSPTPASPNQGP----PPQVPVSPGPPKDSSAPGGPPERTVTPALSSNVLPRHLGSPATS 231
++P P P P PP PV GPP PG P R + V P +P
Sbjct: 291 MAPVPPWPPMAPVPPWPPMAPVPTGPPMAPVPPGPPMARVPPGPPMARVPPGPPMAPLPP 350
Query: 232 VPGMGLHPPGPPLARPILP 250
P M PPGPP+A P+ P
Sbjct: 351 GPPMAPLPPGPPMA-PLPP 368
Score = 35.0 bits (79), Expect = 0.13
Identities = 29/92 (31%), Positives = 37/92 (40%), Gaps = 2/92 (2%)
Query: 155 GAAVTARPGQEIRQRTAAQRNLSPTPASPNQGPPPQVPVSPGPPKDSSAPGGPPERTVTP 214
G A A P + L P P PP+ P+ P PP+ AP PP V P
Sbjct: 220 GGAYYAAPALDPALCVHLVPQLPRPPVLPVPPMPPRPPMVPMPPRPPIAP-MPPMAPVPP 278
Query: 215 -ALSSNVLPRHLGSPATSVPGMGLHPPGPPLA 245
+ + V P +P P M PP PP+A
Sbjct: 279 GSRMAPVPPGPRMAPVPPWPPMAPVPPWPPMA 310
Score = 34.3 bits (77), Expect = 0.22
Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 6/52 (11%)
Query: 188 PPQVPVSPGPPKDSSAPGGPPERTVTPALSSNVLPRHLGSPATSVPGMGLHP 239
PP P+ PGPP + P GPP + P LP P + VP GL P
Sbjct: 343 PPMAPLPPGPPM-APLPPGPPMAPLPPGPPMAPLP-----PRSHVPHTGLAP 388
>gi|4508017 zinc finger protein 207 isoform a [Homo sapiens]
Length = 478
Score = 46.6 bits (109), Expect = 4e-05
Identities = 32/89 (35%), Positives = 41/89 (46%), Gaps = 14/89 (15%)
Query: 170 TAAQRNLSPTPASPNQG--PP------PQVPVSPGPPKDSSAPGGPPERTVTPALSSNVL 221
+AA + P P P QG PP P VP +PG P PG PP P L +
Sbjct: 121 SAASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMP-----PGIPPLMPGVPPLMPGMP 175
Query: 222 PRHLGSPATSVPGMGLHPPGPPLARPILP 250
P G P +P G+ PPGP + P++P
Sbjct: 176 PVMPGMPPGMMPMGGMMPPGPGIP-PLMP 203
Score = 36.2 bits (82), Expect = 0.059
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 7/69 (10%)
Query: 183 PNQGPPPQVP-VSPGPPKDSSAPGGPPERTVTPALSSNVLPRHLGSPATSVPGMGLHPPG 241
P G PP +P + PG P PG PP T A+S+ + +P +VP P
Sbjct: 194 PGPGIPPLMPGMPPGMPPPVPRPGIPP-MTQAQAVSAPGILNRPPAPTATVPA-----PQ 247
Query: 242 PPLARPILP 250
PP+ +P+ P
Sbjct: 248 PPVTKPLFP 256
>gi|7706501 WW domain binding protein 11 [Homo sapiens]
Length = 641
Score = 45.8 bits (107), Expect = 7e-05
Identities = 36/109 (33%), Positives = 43/109 (39%), Gaps = 9/109 (8%)
Query: 140 DPDSKKAKECEPPSAGAAVTARPGQEIRQRTA-AQRNLSPTPASPNQGPPPQVPVSPGPP 198
+ S+K + E S G + + Q Q +Q P P P GPPP P+ P P
Sbjct: 367 EKQSQKQHKEESHSDGTSTASSQQQAPPQSVPPSQIQAPPMPGPPPLGPPPAPPLRPPGP 426
Query: 199 KDSSAPGGPPERTVTPALSSNVLPRHLGSPATSVPGMGLHPPGPPLARP 247
PG PP P L R G P P L PPGPP RP
Sbjct: 427 PTGLPPGPPP--GAPPFL------RPPGMPGLRGPLPRLLPPGPPPGRP 467
Score = 38.1 bits (87), Expect = 0.015
Identities = 27/80 (33%), Positives = 30/80 (37%), Gaps = 14/80 (17%)
Query: 178 PTPASPNQGPPPQVPVSPGPPKDSSAPGGPPERTVTPALSSNVLPRHLGSPATSVPGMGL 237
P P GPPP P P P P GPP R P L P + PG+
Sbjct: 453 PLPRLLPPGPPPGRPPGPPPGPPPGLPPGPPPRGPPPRL-----------PPPAPPGIPP 501
Query: 238 HPPG---PPLARPILPRERG 254
PG PPL P+ P G
Sbjct: 502 PRPGMMRPPLVPPLGPAPPG 521
Score = 31.6 bits (70), Expect = 1.4
Identities = 30/101 (29%), Positives = 35/101 (34%), Gaps = 29/101 (28%)
Query: 176 LSPTPASPNQGPPPQVPVSPGPPKDSSA-------------------PGGPPERT----- 211
L P PA P + P P + PGPP + PG PP R
Sbjct: 413 LGPPPAPPLRPPGPPTGLPPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGPPP 472
Query: 212 -VTPALSSNVLPRHLGSPATSVPGM--GLHPPGPPLARPIL 249
P L PR G P P G+ PP P + RP L
Sbjct: 473 GPPPGLPPGPPPR--GPPPRLPPPAPPGIPPPRPGMMRPPL 511
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 45.4 bits (106), Expect = 1e-04
Identities = 34/115 (29%), Positives = 42/115 (36%), Gaps = 5/115 (4%)
Query: 141 PDSKKAKECEPPSAGAAVTARPG--QEIRQRTAAQRNLSPTPASPNQGPPPQVPVSPGPP 198
P +A + +PP V RP +E Q N P P++P Q P P PP
Sbjct: 254 PTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPP 313
Query: 199 KDSSAPGGPPERT---VTPALSSNVLPRHLGSPATSVPGMGLHPPGPPLARPILP 250
P PP + TP L L +P PG P PP RP P
Sbjct: 314 SRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPP 368
Score = 33.5 bits (75), Expect = 0.38
Identities = 24/69 (34%), Positives = 28/69 (40%), Gaps = 7/69 (10%)
Query: 178 PTPASPNQGPPPQVPVSPGPPKDSSAPGGPPERTVTPALSSNVLPRHLGSPATS---VPG 234
P P P++ PPP V PG S P PP +S LP P+ S P
Sbjct: 356 PLPPPPSERPPPPVRDPPG----RSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPR 411
Query: 235 MGLHPPGPP 243
G PP PP
Sbjct: 412 SGPRPPLPP 420
Score = 32.3 bits (72), Expect = 0.85
Identities = 38/124 (30%), Positives = 46/124 (37%), Gaps = 27/124 (21%)
Query: 143 SKKAKECEPPSA-GAAVTARPGQEIRQRTAAQRNLSPTP-----ASPNQGPPPQVPVSPG 196
S AK PPS G PG QRN P P + P+ PPP VP +P
Sbjct: 135 STSAKPFSPPSGPGRFPVPSPGHRSGP-PEPQRNRMPPPRPDVGSKPDSIPPP-VPSTPR 192
Query: 197 PPKDS-------SAPGGPPERTVTPALSSNVLPRHLG----------SPATSVPGMGLHP 239
P + S PGGP R +P + P + G SP +S P
Sbjct: 193 PIQSSPHNRGSPPVPGGP--RQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRP 250
Query: 240 PGPP 243
P PP
Sbjct: 251 PLPP 254
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 45.4 bits (106), Expect = 1e-04
Identities = 34/115 (29%), Positives = 42/115 (36%), Gaps = 5/115 (4%)
Query: 141 PDSKKAKECEPPSAGAAVTARPG--QEIRQRTAAQRNLSPTPASPNQGPPPQVPVSPGPP 198
P +A + +PP V RP +E Q N P P++P Q P P PP
Sbjct: 254 PTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPP 313
Query: 199 KDSSAPGGPPERT---VTPALSSNVLPRHLGSPATSVPGMGLHPPGPPLARPILP 250
P PP + TP L L +P PG P PP RP P
Sbjct: 314 SRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPP 368
Score = 33.5 bits (75), Expect = 0.38
Identities = 24/69 (34%), Positives = 28/69 (40%), Gaps = 7/69 (10%)
Query: 178 PTPASPNQGPPPQVPVSPGPPKDSSAPGGPPERTVTPALSSNVLPRHLGSPATS---VPG 234
P P P++ PPP V PG S P PP +S LP P+ S P
Sbjct: 356 PLPPPPSERPPPPVRDPPG----RSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPR 411
Query: 235 MGLHPPGPP 243
G PP PP
Sbjct: 412 SGPRPPLPP 420
Score = 32.3 bits (72), Expect = 0.85
Identities = 38/124 (30%), Positives = 46/124 (37%), Gaps = 27/124 (21%)
Query: 143 SKKAKECEPPSA-GAAVTARPGQEIRQRTAAQRNLSPTP-----ASPNQGPPPQVPVSPG 196
S AK PPS G PG QRN P P + P+ PPP VP +P
Sbjct: 135 STSAKPFSPPSGPGRFPVPSPGHRSGP-PEPQRNRMPPPRPDVGSKPDSIPPP-VPSTPR 192
Query: 197 PPKDS-------SAPGGPPERTVTPALSSNVLPRHLG----------SPATSVPGMGLHP 239
P + S PGGP R +P + P + G SP +S P
Sbjct: 193 PIQSSPHNRGSPPVPGGP--RQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRP 250
Query: 240 PGPP 243
P PP
Sbjct: 251 PLPP 254
>gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens]
Length = 464
Score = 45.4 bits (106), Expect = 1e-04
Identities = 35/105 (33%), Positives = 44/105 (41%), Gaps = 8/105 (7%)
Query: 150 EPPSAGAAVTARPGQEIRQRTAAQRNLSPTPASPNQGPPPQ---VPVSPGPPKDSSAPGG 206
E P A ++ A P R L P P P PPP +P+ P PP AP G
Sbjct: 215 EKPPAPPSLPAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPT-GPAPSG 273
Query: 207 PPERTVTPALSSNVLPRH--LGSPATSV--PGMGLHPPGPPLARP 247
PP P + V P + PA+ V P G+HPP P + P
Sbjct: 274 PPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPP 318
Score = 36.6 bits (83), Expect = 0.045
Identities = 36/106 (33%), Positives = 41/106 (38%), Gaps = 24/106 (22%)
Query: 151 PPSAGAAVTARPGQEIRQRTAAQRNLSPTPASPNQGPPPQVP-VSPGPPK-DSSAPGGPP 208
PPSAG A PG + A +P P G PQ P V P PP SAPG P
Sbjct: 367 PPSAGVHPQA-PG--VHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHP 423
Query: 209 ERTVTPALSSNVLPRHLGSPATSVPGMGLHPPGP--PLARPILPRE 252
+ P G+HPP P P+ RP LP E
Sbjct: 424 Q-----------------PPGVHPSNPGVHPPTPMPPMLRPPLPSE 452
Score = 34.7 bits (78), Expect = 0.17
Identities = 28/96 (29%), Positives = 33/96 (34%), Gaps = 28/96 (29%)
Query: 178 PTPASPNQGPPPQVPVSPGPPK-DSSAPGGPPERTVTPALSSNVLPR------------- 223
P P P GP P P PGPP+ APG P V +S V P
Sbjct: 260 PLPPMPPTGPAPSGP--PGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHP 317
Query: 224 ------------HLGSPATSVPGMGLHPPGPPLARP 247
H +P P G+HPP P + P
Sbjct: 318 PAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPP 353
Score = 33.5 bits (75), Expect = 0.38
Identities = 24/72 (33%), Positives = 28/72 (38%), Gaps = 4/72 (5%)
Query: 180 PASPNQGPPPQVPVSPGPPKDSSAPG-GPPERTVTPALSSNVLPR---HLGSPATSVPGM 235
P +P PP P P APG PP V P S P H +P P
Sbjct: 289 PPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHPPAPGVHPPAPGVHPPAP 348
Query: 236 GLHPPGPPLARP 247
G+HPP P + P
Sbjct: 349 GVHPPAPGVHPP 360
Score = 32.3 bits (72), Expect = 0.85
Identities = 28/97 (28%), Positives = 35/97 (36%), Gaps = 22/97 (22%)
Query: 180 PASPNQGPPPQVPVSPGPPKDSSAPG---------------GPPERTVTPALSSNVLPR- 223
P +P PP P P APG PP V P S+ V P+
Sbjct: 317 PPAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQA 376
Query: 224 ---HLGSPATSVPGMGLHPPGP---PLARPILPRERG 254
H +PA G+HPP P P A + P+ G
Sbjct: 377 PGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQPPG 413
Score = 31.2 bits (69), Expect = 1.9
Identities = 23/75 (30%), Positives = 28/75 (37%), Gaps = 4/75 (5%)
Query: 180 PASPNQGPP-PQV-PVSPG--PPKDSSAPGGPPERTVTPALSSNVLPRHLGSPATSVPGM 235
P +P PP P V P +PG PP P P P + H +P P
Sbjct: 303 PPAPGVHPPAPGVHPPAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAP 362
Query: 236 GLHPPGPPLARPILP 250
G+HPP P P
Sbjct: 363 GVHPPPSAGVHPQAP 377
Score = 29.6 bits (65), Expect = 5.5
Identities = 24/76 (31%), Positives = 29/76 (38%), Gaps = 6/76 (7%)
Query: 180 PASPNQGPP-PQV-PVSPG---PPKDSSAPGGPPERTVTPALSSNVLPRHLGSPATSVPG 234
P +P PP P V P +PG PP P P PA+ H +P
Sbjct: 345 PPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQA 404
Query: 235 MGLHPPGPPLARPILP 250
G+HP PP P P
Sbjct: 405 PGVHPQ-PPGVHPSAP 419
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 44.7 bits (104), Expect = 2e-04
Identities = 38/124 (30%), Positives = 52/124 (41%), Gaps = 13/124 (10%)
Query: 141 PDSKKAKECEPPSAGAAVTARPGQEIR--QRTAAQRNLSPTPASPN----QGPPPQVPVS 194
P+ + K +PP + V +P +++ +++ P P SP G PP PVS
Sbjct: 1214 PEGEARKPAKPPVSPKPVLTQPVPKLQGSPTPTSKKVPLPGPGSPEVKRAHGTPP--PVS 1271
Query: 195 PGPPKDSSAPGGPPERTVTPALSSNVLPRHLGSPATSVPGMGLHPPGPPL---ARPILPR 251
P PP +AP P + V S + P SPA P PPG P A P P
Sbjct: 1272 PKPPPPPTAP--KPVKAVAGLPSGSAGPSPAPSPARQPPAALAKPPGTPPSLGASPAKPP 1329
Query: 252 ERGA 255
GA
Sbjct: 1330 SPGA 1333
Score = 33.5 bits (75), Expect = 0.38
Identities = 27/107 (25%), Positives = 38/107 (35%), Gaps = 8/107 (7%)
Query: 141 PDSKKAKECEPPSAGAA----VTARPGQEIRQRTAAQRNLSPTPASPNQGPPPQVPVSPG 196
P+ K+A PP + +P + + + SP P SP + PP + PG
Sbjct: 1258 PEVKRAHGTPPPVSPKPPPPPTAPKPVKAVAGLPSGSAGPSPAP-SPARQPPAALAKPPG 1316
Query: 197 PPKDSSAPGGPPERTVTPALSSNVLPRHLGSPATSVPGMGLHPPGPP 243
P A P PAL P + A + PP PP
Sbjct: 1317 TPPSLGASPAKPPSPGAPALHVPAKPPRAAAAAAAAAAA---PPAPP 1360
Score = 32.7 bits (73), Expect = 0.65
Identities = 36/130 (27%), Positives = 53/130 (40%), Gaps = 23/130 (17%)
Query: 130 KTAKLILERFDPDSK--KAKECEP---PSAGAAVTARPGQEIRQRTAAQRNLSPTPASPN 184
+ K IL D + KAKE E P +V +R+R A+++ A P
Sbjct: 1136 ENVKFILTESDTVKRRPKAKEREAGPEPPPPLSVYHNGTGTVRRRPASEQ------AGPP 1189
Query: 185 QGPPPQVPVSPGPPKDSS------APGGPPERTVTPALS-----SNVLPRHLGSPATSVP 233
+ PPP P P PP D + P G + P +S + +P+ GSP +
Sbjct: 1190 ELPPPPPPAEP-PPTDLAHLPPLPPPEGEARKPAKPPVSPKPVLTQPVPKLQGSPTPTSK 1248
Query: 234 GMGLHPPGPP 243
+ L PG P
Sbjct: 1249 KVPLPGPGSP 1258
Score = 29.6 bits (65), Expect = 5.5
Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 12/73 (16%)
Query: 160 ARPGQEIRQRTAAQRNLSPTPASPNQG--------PPPQVPVS--PGPPKDSSAPGGPPE 209
ARPG+ + + ++ P P P Q PPQ P PG P+ P GP
Sbjct: 742 ARPGRH--GHSIKRASVPPVPGKPRQVLPPGTSHFTPPQTPTKTRPGSPQALGGPHGPAP 799
Query: 210 RTVTPALSSNVLP 222
T + +LP
Sbjct: 800 ATAKVKPTPQLLP 812
>gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 44.7 bits (104), Expect = 2e-04
Identities = 36/95 (37%), Positives = 42/95 (44%), Gaps = 13/95 (13%)
Query: 151 PPSAGAAVTARPGQEIRQRTAAQRNLSPTPASPNQGPPPQVPVSPGPPKDSSAPGGPPER 210
PP G A P Q+I + SP P+ P+ PPP + PP S AP PP
Sbjct: 141 PPPPGPA--PGPPQDISEPPGG----SPLPSPPSTAPPPPPLLLEPPPPPSMAPPPPP-- 192
Query: 211 TVTPALSSNVLPRHLGSPATSVPGMGLHPPGPPLA 245
V ALS P L SP+ P PP PPLA
Sbjct: 193 -VLEALSP---PHTLSSPSIPTP-PDFIPPAPPLA 222
Score = 35.8 bits (81), Expect = 0.077
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Query: 187 PPPQVPVSPGPPKDSSAPGGPPERTVTPALSSNVLPRHLGSPATSVPGMGLHPPGPPLAR 246
PPP +PGPP+D S P G P+ + P L P P + PP PP+
Sbjct: 140 PPPPPGPAPGPPQDISEPPGGSPLPSPPSTAPPPPPLLLEPP----PPPSMAPPPPPVLE 195
Query: 247 PILP 250
+ P
Sbjct: 196 ALSP 199
Score = 30.8 bits (68), Expect = 2.5
Identities = 31/119 (26%), Positives = 41/119 (34%), Gaps = 22/119 (18%)
Query: 151 PPSAGAAVTARPGQEIRQRTAAQRNLSP-TPASPNQGPPPQVPVSPGPPKDSSA------ 203
PP A P + T + L P TP GP + + GP S+A
Sbjct: 642 PPKATPEPAIPPKATLWPATPPKATLGPATPLKATSGPTTPLKATSGPAIASTATTLPTT 701
Query: 204 -----------PGGPPERTVTPALSSNVLPRHLGSP--ATSVPGMGLHPPG--PPLARP 247
P G PE+ + +S+ R GSP AT +P G PP P
Sbjct: 702 TSQLMAEKDSGPAGQPEKPASQEVSTPSQARGEGSPSEATRLPTQGARSSAAFPPKTSP 760
Score = 29.6 bits (65), Expect = 5.5
Identities = 33/138 (23%), Positives = 49/138 (35%), Gaps = 10/138 (7%)
Query: 141 PDSKKAKECEPP-SAGAAVTARPGQEIRQRTAAQRNLSPTPASPNQGPPPQVPVSPGPPK 199
PD +C A A + R GQ Q P P P PP P P PP
Sbjct: 354 PDRAPEPDCPGELKATAPASPRLGQSQSQADERAGTPPPAPPLPPPAPPLPPPAPPLPP- 412
Query: 200 DSSAPGGP-PERTVTPALSSNVLPRHLGSPATSVPGMGLHPPGPPLARPILPRERGALDR 258
+AP P ++ P P+ SPA P + P+ R+ +++
Sbjct: 413 --AAPPLPCAQKAAHPPAGFTKTPKS-SSPALKPKPNPPSPENTASSAPVDWRDPSQMEK 469
Query: 259 ----IVEYLVGDGPQNRY 272
+ YL G ++R+
Sbjct: 470 LRNELAAYLCGSRREDRF 487
>gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 44.7 bits (104), Expect = 2e-04
Identities = 36/95 (37%), Positives = 42/95 (44%), Gaps = 13/95 (13%)
Query: 151 PPSAGAAVTARPGQEIRQRTAAQRNLSPTPASPNQGPPPQVPVSPGPPKDSSAPGGPPER 210
PP G A P Q+I + SP P+ P+ PPP + PP S AP PP
Sbjct: 141 PPPPGPA--PGPPQDISEPPGG----SPLPSPPSTAPPPPPLLLEPPPPPSMAPPPPP-- 192
Query: 211 TVTPALSSNVLPRHLGSPATSVPGMGLHPPGPPLA 245
V ALS P L SP+ P PP PPLA
Sbjct: 193 -VLEALSP---PHTLSSPSIPTP-PDFIPPAPPLA 222
Score = 35.8 bits (81), Expect = 0.077
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Query: 187 PPPQVPVSPGPPKDSSAPGGPPERTVTPALSSNVLPRHLGSPATSVPGMGLHPPGPPLAR 246
PPP +PGPP+D S P G P+ + P L P P + PP PP+
Sbjct: 140 PPPPPGPAPGPPQDISEPPGGSPLPSPPSTAPPPPPLLLEPP----PPPSMAPPPPPVLE 195
Query: 247 PILP 250
+ P
Sbjct: 196 ALSP 199
Score = 30.8 bits (68), Expect = 2.5
Identities = 31/119 (26%), Positives = 41/119 (34%), Gaps = 22/119 (18%)
Query: 151 PPSAGAAVTARPGQEIRQRTAAQRNLSP-TPASPNQGPPPQVPVSPGPPKDSSA------ 203
PP A P + T + L P TP GP + + GP S+A
Sbjct: 642 PPKATPEPAIPPKATLWPATPPKATLGPATPLKATSGPTTPLKATSGPAIASTATTLPTT 701
Query: 204 -----------PGGPPERTVTPALSSNVLPRHLGSP--ATSVPGMGLHPPG--PPLARP 247
P G PE+ + +S+ R GSP AT +P G PP P
Sbjct: 702 TSQLMAEKDSGPAGQPEKPASQEVSTPSQARGEGSPSEATRLPTQGARSSAAFPPKTSP 760
Score = 29.6 bits (65), Expect = 5.5
Identities = 33/138 (23%), Positives = 49/138 (35%), Gaps = 10/138 (7%)
Query: 141 PDSKKAKECEPP-SAGAAVTARPGQEIRQRTAAQRNLSPTPASPNQGPPPQVPVSPGPPK 199
PD +C A A + R GQ Q P P P PP P P PP
Sbjct: 354 PDRAPEPDCPGELKATAPASPRLGQSQSQADERAGTPPPAPPLPPPAPPLPPPAPPLPP- 412
Query: 200 DSSAPGGP-PERTVTPALSSNVLPRHLGSPATSVPGMGLHPPGPPLARPILPRERGALDR 258
+AP P ++ P P+ SPA P + P+ R+ +++
Sbjct: 413 --AAPPLPCAQKAAHPPAGFTKTPKS-SSPALKPKPNPPSPENTASSAPVDWRDPSQMEK 469
Query: 259 ----IVEYLVGDGPQNRY 272
+ YL G ++R+
Sbjct: 470 LRNELAAYLCGSRREDRF 487
>gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo
sapiens]
Length = 1188
Score = 44.7 bits (104), Expect = 2e-04
Identities = 36/95 (37%), Positives = 42/95 (44%), Gaps = 13/95 (13%)
Query: 151 PPSAGAAVTARPGQEIRQRTAAQRNLSPTPASPNQGPPPQVPVSPGPPKDSSAPGGPPER 210
PP G A P Q+I + SP P+ P+ PPP + PP S AP PP
Sbjct: 141 PPPPGPA--PGPPQDISEPPGG----SPLPSPPSTAPPPPPLLLEPPPPPSMAPPPPP-- 192
Query: 211 TVTPALSSNVLPRHLGSPATSVPGMGLHPPGPPLA 245
V ALS P L SP+ P PP PPLA
Sbjct: 193 -VLEALSP---PHTLSSPSIPTP-PDFIPPAPPLA 222
Score = 35.8 bits (81), Expect = 0.077
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Query: 187 PPPQVPVSPGPPKDSSAPGGPPERTVTPALSSNVLPRHLGSPATSVPGMGLHPPGPPLAR 246
PPP +PGPP+D S P G P+ + P L P P + PP PP+
Sbjct: 140 PPPPPGPAPGPPQDISEPPGGSPLPSPPSTAPPPPPLLLEPP----PPPSMAPPPPPVLE 195
Query: 247 PILP 250
+ P
Sbjct: 196 ALSP 199
Score = 30.8 bits (68), Expect = 2.5
Identities = 31/119 (26%), Positives = 41/119 (34%), Gaps = 22/119 (18%)
Query: 151 PPSAGAAVTARPGQEIRQRTAAQRNLSP-TPASPNQGPPPQVPVSPGPPKDSSA------ 203
PP A P + T + L P TP GP + + GP S+A
Sbjct: 642 PPKATPEPAIPPKATLWPATPPKATLGPATPLKATSGPTTPLKATSGPAIASTATTLPTT 701
Query: 204 -----------PGGPPERTVTPALSSNVLPRHLGSP--ATSVPGMGLHPPG--PPLARP 247
P G PE+ + +S+ R GSP AT +P G PP P
Sbjct: 702 TSQLMAEKDSGPAGQPEKPASQEVSTPSQARGEGSPSEATRLPTQGARSSAAFPPKTSP 760
Score = 29.6 bits (65), Expect = 5.5
Identities = 33/138 (23%), Positives = 49/138 (35%), Gaps = 10/138 (7%)
Query: 141 PDSKKAKECEPP-SAGAAVTARPGQEIRQRTAAQRNLSPTPASPNQGPPPQVPVSPGPPK 199
PD +C A A + R GQ Q P P P PP P P PP
Sbjct: 354 PDRAPEPDCPGELKATAPASPRLGQSQSQADERAGTPPPAPPLPPPAPPLPPPAPPLPP- 412
Query: 200 DSSAPGGP-PERTVTPALSSNVLPRHLGSPATSVPGMGLHPPGPPLARPILPRERGALDR 258
+AP P ++ P P+ SPA P + P+ R+ +++
Sbjct: 413 --AAPPLPCAQKAAHPPAGFTKTPKS-SSPALKPKPNPPSPENTASSAPVDWRDPSQMEK 469
Query: 259 ----IVEYLVGDGPQNRY 272
+ YL G ++R+
Sbjct: 470 LRNELAAYLCGSRREDRF 487
>gi|239582763 ral guanine nucleotide dissociation stimulator-like 3
isoform 2 [Homo sapiens]
Length = 710
Score = 44.7 bits (104), Expect = 2e-04
Identities = 43/164 (26%), Positives = 70/164 (42%), Gaps = 30/164 (18%)
Query: 122 EVMEKETYKTAKLILERFDPDSKKAKECEPPSAGAAVTARPGQEIRQRTAAQRNLSPTPA 181
++ E+++Y+ +++I EPP+A + R IR+R + + LS A
Sbjct: 489 QLTEEQSYRLSRVI--------------EPPAASCPSSPR----IRRRISLTKRLSAKLA 530
Query: 182 SPNQGPPPQVPVSPGPPKDSSAPGGPPERTVT---PALSSNVLPRHLGSPATSVPGMGLH 238
P P P P S +PG PP + PA S P G P+T +P + L
Sbjct: 531 REKSSSPSGSPGDPSSPTSSVSPGSPPSSPRSRDAPAGSPPASPGPQG-PSTKLP-LSLD 588
Query: 239 PPGP-PLARPI------LPRERGALDRIVEYLVGDGPQNRYALI 275
P P P A P+ LP ++ + R++ + + N Y I
Sbjct: 589 LPSPRPFALPLGSPRIPLPAQQSSEARVIRVSIDNDHGNLYRSI 632
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 44.7 bits (104), Expect = 2e-04
Identities = 46/153 (30%), Positives = 63/153 (41%), Gaps = 15/153 (9%)
Query: 103 ERNNEALDDLKSQRKKILEEVME-KETYKTAKLILERFDPDSKKAKECE----PPSAGAA 157
+RN E L S + + + + +E+ +A L+ DP K+ PP A AA
Sbjct: 1371 KRNLETLPSFSSDEEDSVAKNRDLQESISSAISALD--DPPLAGPKDTSTPDGPPLAPAA 1428
Query: 158 VTARPGQEIRQRTAAQRNLSPTPASPNQGPPPQVPVSPGPPKDSSAPGGPPERTVTPALS 217
P + +A N +P P + PPP P +P P P PP+ PAL
Sbjct: 1429 AVPGP-PPLPGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQPQPPPPPPPPQ----PALP 1483
Query: 218 SNVLPRHLGSPATSVPGMGLHPPGPPLARPILP 250
S P L +P S P PP PP A P P
Sbjct: 1484 S---PPPLVAPTPSSPPPPPLPPPPPPAMPSPP 1513
Score = 37.4 bits (85), Expect = 0.026
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 6/53 (11%)
Query: 176 LSPTPASPNQGP-----PPQVPVSPGPPKDSSAP-GGPPERTVTPALSSNVLP 222
++PTP+SP P PP +P P PP ++AP PPE P+ LP
Sbjct: 1489 VAPTPSSPPPPPLPPPPPPAMPSPPPPPPPAAAPLAAPPEEPAAPSPEDPELP 1541
Score = 34.3 bits (77), Expect = 0.22
Identities = 21/72 (29%), Positives = 28/72 (38%), Gaps = 14/72 (19%)
Query: 177 SPTPASPNQGPPPQVPVSPGPPKDSSAPGGPPERTVTPALSSNVLPRHLGSPATSVPGMG 236
+P P P PPPQ + PP + P PP + P P ++P
Sbjct: 1466 TPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPP------------PPPPAMPSP- 1512
Query: 237 LHPPGPPLARPI 248
PP PP A P+
Sbjct: 1513 -PPPPPPAAAPL 1523
Score = 30.8 bits (68), Expect = 2.5
Identities = 25/85 (29%), Positives = 30/85 (35%), Gaps = 16/85 (18%)
Query: 182 SPNQGPPPQVPVSPGPPKDSSAPGGPPERTVTPALSSNVLP---RHLGSPATSVPGMGLH 238
SP PP P P GGP V P +LP H SP+ S +G+H
Sbjct: 763 SPPPPPPTAQSTQPTPHGLLLEAGGPDLPLVLPPPPPQLLPSVLSHAPSPSPSASKVGVH 822
Query: 239 -------------PPGPPLARPILP 250
PP PP P +P
Sbjct: 823 LLEPATRDGAPQPPPPPPPPPPPMP 847
Score = 30.0 bits (66), Expect = 4.2
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Query: 161 RPGQEIRQRTAAQRNLSPTPASPNQGPPPQVPVSPGPPK--DSSAPGGPPERTVTPALSS 218
RP +R+ A+ +P A + PPP+ P P P+ + + PPE+T A+
Sbjct: 1669 RPPVPVRRSGQAK---NPVSAGGSSAPPPKAPAPPPKPETPEKTTSEKPPEQTPETAMPE 1725
Query: 219 NVLP 222
P
Sbjct: 1726 PPAP 1729
Score = 29.6 bits (65), Expect = 5.5
Identities = 27/109 (24%), Positives = 35/109 (32%), Gaps = 11/109 (10%)
Query: 141 PDSKKAKECEPPSAGAAVTARPGQEIRQRTAAQRNLSPTPASPN-QGPPPQVPVSPGPPK 199
P+ +E PP+ A T +P Q P P P PPP V +P P
Sbjct: 1448 PEPPLLEEKPPPTPPPAPTPQP----------QPPPPPPPPQPALPSPPPLVAPTPSSPP 1497
Query: 200 DSSAPGGPPERTVTPALSSNVLPRHLGSPATSVPGMGLHPPGPPLARPI 248
P PP +P L +P P P RP+
Sbjct: 1498 PPPLPPPPPPAMPSPPPPPPPAAAPLAAPPEEPAAPSPEDPELPDTRPL 1546
Score = 29.3 bits (64), Expect = 7.2
Identities = 25/97 (25%), Positives = 37/97 (38%), Gaps = 11/97 (11%)
Query: 174 RNLSPTPASPNQGPPPQVPVSPGPPKDSSAPGGPPERTVTPALSSNVLPRHLGSPATSVP 233
++LS P+ G PPQ P P PP ++ P++ + + G P
Sbjct: 467 QDLSKAPSY--SGGPPQPPSGPPPPGLATCQSYSPDQ---------LQGQLYGVQGEPYP 515
Query: 234 GMGLHPPGPPLARPILPRERGALDRIVEYLVGDGPQN 270
G H G P A P L G + + G GP +
Sbjct: 516 GPAAHSQGLPTASPSLSYSTGHSPALSGHGGGWGPSS 552
Score = 29.3 bits (64), Expect = 7.2
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Query: 173 QRNLSPTPASPNQGPPPQVP---VSPGPPKDSSAPGGPP 208
Q L+P P SP + PP VP + P PP + P PP
Sbjct: 1300 QAGLTP-PLSPPKSVPPSVPARGLQPQPPATPAVPHPPP 1337
Score = 28.9 bits (63), Expect = 9.4
Identities = 17/57 (29%), Positives = 22/57 (38%), Gaps = 13/57 (22%)
Query: 150 EPPSAGAAVTARPGQEIRQRTAAQRNLSPTPASPNQGPPPQVPVSPGPPKDSSAPGG 206
+PP + V A P L + P+Q PP P P PP +S P G
Sbjct: 1014 KPPELPSTVNAEP-------------LGLIQSGPHQAAPPPPPPPPPPPAPASEPKG 1057
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 43.5 bits (101), Expect = 4e-04
Identities = 36/105 (34%), Positives = 45/105 (42%), Gaps = 9/105 (8%)
Query: 151 PPSAGAAVTARPGQEIRQRTAAQRNLSPTPASPNQGPPP------QVPVSPGPPKDSSAP 204
PPS A P ++ A +SP+ P Q PPP QVP SP P +P
Sbjct: 691 PPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSP-PASPPMSP 749
Query: 205 GGPPERTVTPALSSNVLPRHLGSPATSVPGMGLHPPGPPLARPIL 249
P V P L++ L + SP S+P L P PP A P L
Sbjct: 750 SATPPPRVPPLLAAPPL-QVPPSPPASLPMSPLAKP-PPQAPPAL 792
Score = 43.1 bits (100), Expect = 5e-04
Identities = 34/120 (28%), Positives = 46/120 (38%), Gaps = 15/120 (12%)
Query: 145 KAKECEPPSAGAAVTARPGQEIRQRTAA---QRNLSPTPASPNQGP---PPQVPVSPGPP 198
+A P S + A P + A Q SP P+ P Q P P PVSP
Sbjct: 631 QAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSAT 690
Query: 199 KDSSAPGG--------PPERTVTPALSSNVLPRHLGSPATSVPGMGLHPPGPPLARPILP 250
S AP PP +P +S + P P + P + + PP PP + P+ P
Sbjct: 691 PPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQV-PPSPPASPPMSP 749
Score = 38.9 bits (89), Expect = 0.009
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Query: 180 PASPNQGPPPQVP--VSPGPPKDSSAPGGPPERTV-TPALSSNVLPRHLGSPATSVPGMG 236
P SP PPP+ P ++ PP+ A PP + + +P LS P P ++P +
Sbjct: 572 PPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQ 631
Query: 237 LHPPGPPLARPILP 250
PP PP + P+ P
Sbjct: 632 A-PPSPPASPPLSP 644
Score = 37.7 bits (86), Expect = 0.020
Identities = 28/101 (27%), Positives = 41/101 (40%), Gaps = 4/101 (3%)
Query: 151 PPSAGAAVTARPGQEIRQRTAAQRNLSPTP-ASPNQGPPPQVPVSPGPPKDSSAPGGPPE 209
PP + +A P Q A + P+P ASP P P PP + PP
Sbjct: 683 PPVSPSATP--PSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPS 740
Query: 210 RTVTPALSSNVLPRHLGSPATSVPGMGLHPPGPPLARPILP 250
+P +S + P P + P + + PP PP + P+ P
Sbjct: 741 PPASPPMSPSATPPPRVPPLLAAPPLQV-PPSPPASLPMSP 780
Score = 35.8 bits (81), Expect = 0.077
Identities = 35/116 (30%), Positives = 45/116 (38%), Gaps = 21/116 (18%)
Query: 152 PSAGAAVTARPGQEIRQRTAAQRNLSPTPASPNQGPPPQVPVSPGPPKDSSAPG------ 205
PSAG + RP +A + SP + P+ P+ P P PK
Sbjct: 228 PSAGGGLQ-RPASRSLSSSATPLS-SPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQV 285
Query: 206 GPPERTVTPA---LSSNVL--PRHLGSPATSVPG--------MGLHPPGPPLARPI 248
PP + PA LSS+ L P G+ A VP PP PPLA P+
Sbjct: 286 TPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPL 341
Score = 35.4 bits (80), Expect = 0.100
Identities = 27/104 (25%), Positives = 38/104 (36%), Gaps = 6/104 (5%)
Query: 151 PPSAGAAVTARP--GQEIRQRTAAQRNLSPTPASPNQGPPPQVPVSPGPPKDSSAPGGPP 208
PP AA P + + + P P N P + P PP + P PP
Sbjct: 287 PPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPLPLAPP 346
Query: 209 ERTVTPALSSNVLPRHLGSPATSVPGMGLHPP--GPPLARPILP 250
+ P+L + LP +P + P PP PP + I P
Sbjct: 347 SPSAPPSLQT--LPSPPATPPSQAPPSMTTPPMQAPPSLQTIPP 388
Score = 33.9 bits (76), Expect = 0.29
Identities = 32/101 (31%), Positives = 42/101 (41%), Gaps = 21/101 (20%)
Query: 151 PPSAGAAVTARPGQEIRQRTAAQRNLSPTPASPNQGPPPQVPVSPGPPKDSSAPGGPPER 210
PPS A+ T + A +R +P P + GP + ++PGPP PP R
Sbjct: 843 PPSPPASPTLQ---------APRRPPTPGPDTSVSGPRLTLALAPGPPP-------PPSR 886
Query: 211 TVTPALSSNVLPRHLGSPATSVP----GMGLHPPGPPLARP 247
+ + LS L H S ATS P G P G A P
Sbjct: 887 SPSSTLSGPDLAGH-SSSATSTPEELRGYDSGPEGGAAASP 926
Score = 33.5 bits (75), Expect = 0.38
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 10/85 (11%)
Query: 167 RQRTAAQRNLSPTPASPNQGPPPQVPVSPGPPKDSSAPGGPPERT-VTPALSSNVLPRHL 225
RQ A+ + S ++P PP Q P+ S P PP +T ++PA+S P +
Sbjct: 435 RQTQASLTSPSRPASTPPDSPPLQAPL--------SLPASPPLQTSLSPAVSPLSSPLTI 486
Query: 226 GSPATSVPGMGLHPPGPPLARPILP 250
P ++ + H P PL+ I+P
Sbjct: 487 -HPLQALSSLASHSPQAPLSSLIMP 510
Score = 33.5 bits (75), Expect = 0.38
Identities = 33/113 (29%), Positives = 44/113 (38%), Gaps = 12/113 (10%)
Query: 141 PDSKKAKECEPPSAGAAVTARPGQEIRQRTAAQRNLSPTPASPNQGPPP-QVPVSPGPPK 199
P++ + PP A A+ + P Q + LSP P Q PP +P PP
Sbjct: 581 PETPSSIATPPPQAPPALASPPLQGLPSPP-----LSPLATPPPQAPPXLALPPLQAPPS 635
Query: 200 DSSAPGGPPERTVTPALSSNVLPRHL----GSPATSVPGMG-LHPPGPPLARP 247
++P P T +P + N L HL SP S P PP P P
Sbjct: 636 PPASPPLSPLATPSPQ-APNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSP 687
Score = 30.0 bits (66), Expect = 4.2
Identities = 27/84 (32%), Positives = 35/84 (41%), Gaps = 14/84 (16%)
Query: 180 PASPNQGPPPQVPVS---------PGPPKDSSAPGGPP-ERTVTPALSSNVLPRHLGSPA 229
P SP PPPQ P + P PP +S PG P + + +S P P
Sbjct: 777 PMSPLAKPPPQAPPALATPPLQALPSPP--ASFPGQAPFSPSASLPMSPLATPPPQAPPV 834
Query: 230 TSVPGMGLHPPGPPLARPILPRER 253
+ P + + PP PP A P L R
Sbjct: 835 LAAPLLQV-PPSPP-ASPTLQAPR 856
>gi|4504465 homeobox B2 [Homo sapiens]
Length = 356
Score = 42.7 bits (99), Expect = 6e-04
Identities = 36/121 (29%), Positives = 53/121 (43%), Gaps = 13/121 (10%)
Query: 135 ILERFDPDSKKAKECEPPSAGAAVT---ARPGQEIRQRTAAQRNLSPTPASPNQGPPPQV 191
+LE F S K PP T +PG QR +Q+ PA P PPP +
Sbjct: 28 VLETFQTSSIKESTLIPPPPPFEQTFPSLQPGASTLQRPRSQKRAEDGPALPPP-PPPPL 86
Query: 192 PVSPGPP-----KDSSAPGGPPERTVTPALSSNVLPRH-LGSPATSVPGMGLHPPGPPLA 245
P +P P K+ + P + +P+ +++ +P +GSPA G+GL G A
Sbjct: 87 PAAPPAPEFPWMKEKKSAKKPSQSATSPSPAASAVPASGVGSPA---DGLGLPEAGGGGA 143
Query: 246 R 246
R
Sbjct: 144 R 144
>gi|223972704 hypothetical protein LOC284418 [Homo sapiens]
Length = 922
Score = 42.4 bits (98), Expect = 8e-04
Identities = 37/124 (29%), Positives = 56/124 (45%), Gaps = 14/124 (11%)
Query: 143 SKKAKECEPPSAGAAVTARPGQEIRQRTAAQRNLSPTPASPNQGPPP--QVPVSPGPPKD 200
S+KA PS A P ++ +A+ R S PA P + PPP + P P P+
Sbjct: 459 SQKAPAVPAPSQKAPAIPAPSRKASAASASPRKASAVPAPPQKTPPPSQKAPSVPTIPQK 518
Query: 201 SSAPGGPPERT-VTPALSSNVLPRH-------LGSPAT--SVPG-MGLHPPGPPLARPIL 249
+ +P P +++ + PA S LP L PA+ +PG + P G P R +L
Sbjct: 519 AVSPTAPKKKSLLLPAPSQKALPTSPTEYQMALSPPASRGKLPGDFDVLPTGIP-GRAVL 577
Query: 250 PRER 253
R +
Sbjct: 578 ERSQ 581
Score = 37.7 bits (86), Expect = 0.020
Identities = 32/115 (27%), Positives = 41/115 (35%), Gaps = 11/115 (9%)
Query: 144 KKAKECEPPSAGAAVTARPGQEIRQRTAAQRNLSPTPASPNQGPPPQVPVSPGPPKDSSA 203
+KA PS A P Q+ A R S ASP + P PP A
Sbjct: 450 RKAPAVPAPSQKAPAVPAPSQKAPAIPAPSRKASAASASPRKASAVPAPPQKTPPPSQKA 509
Query: 204 PGGP--PERTVTPALSSNVLPRHLGSPATSVPGMGLHPP------GPPLARPILP 250
P P P++ V+P + L PA S + P PP +R LP
Sbjct: 510 PSVPTIPQKAVSPTAPKK---KSLLLPAPSQKALPTSPTEYQMALSPPASRGKLP 561
Score = 31.6 bits (70), Expect = 1.4
Identities = 23/84 (27%), Positives = 32/84 (38%), Gaps = 10/84 (11%)
Query: 174 RNLSPTPAS-----PNQGPPPQVPVSPGPPKDSSAPGGPPERT-VTPALSSNV----LPR 223
+ L PAS P PP + P + PP+ + A P ++ PA S P
Sbjct: 420 QKLPAVPASSWKPPPGLAPPQKAPAASAPPRKAPAVPAPSQKAPAVPAPSQKAPAIPAPS 479
Query: 224 HLGSPATSVPGMGLHPPGPPLARP 247
S A++ P P PP P
Sbjct: 480 RKASAASASPRKASAVPAPPQKTP 503
>gi|221139926 NHS-like 1 [Homo sapiens]
Length = 1606
Score = 42.0 bits (97), Expect = 0.001
Identities = 33/116 (28%), Positives = 44/116 (37%), Gaps = 10/116 (8%)
Query: 144 KKAKECEPPSAGAAVTARPGQEIRQRTAAQRNLSPTPASPNQGPPPQVPVSPGPPKDSSA 203
+K+ S ++ T+ + + + L P SP PPP VP P P +
Sbjct: 888 RKSSLISSVSISSSSTSLSSSTSTEGSGTMKKLDPAVGSPPAPPPPPVPSPPFPCPADRS 947
Query: 204 PGGPPERTVTPALSSNVLPR---------HLGSPATSVPGMGLHPPGPPLARPILP 250
P PP VT + LP P S P L PP P L+ PILP
Sbjct: 948 PFLPPPPPVTDCSQGSPLPHSPVFPPPPPEALIPFCSPPDWCLSPPRPALS-PILP 1002
>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
subunit [Homo sapiens]
Length = 551
Score = 42.0 bits (97), Expect = 0.001
Identities = 27/67 (40%), Positives = 28/67 (41%), Gaps = 6/67 (8%)
Query: 178 PTPASPNQGPPPQVPVSPGPPKDSSAPGGPPERTVTPALSSNVLPRHLGSPATSVPGMGL 237
P PA P GPPP P PP+ P GPP P VLP L P P G
Sbjct: 218 PGPAGPG-GPPPPFPAGQTPPRPPLGPPGPPGPPGPPP-PGQVLPPPLAGP----PNRGD 271
Query: 238 HPPGPPL 244
PP P L
Sbjct: 272 RPPPPVL 278
Score = 37.7 bits (86), Expect = 0.020
Identities = 30/86 (34%), Positives = 30/86 (34%), Gaps = 14/86 (16%)
Query: 162 PGQEIRQRTAAQRNLSPTPASPNQGPPPQVPVSPGPPKDSSAPGGPPERTVTPALSSNVL 221
PGQ Q P P P GPP PGPP P PP P
Sbjct: 280 PGQPFGQPPLGPLPPGPPPPVPGYGPP------PGPPPPQQGP-PPPPGPFPPR-----P 327
Query: 222 PRHLGSPATSVPGMGLHPPGPPLARP 247
P LG P T P H PGPP P
Sbjct: 328 PGPLGPPLTLAPPP--HLPGPPPGAP 351
Score = 33.5 bits (75), Expect = 0.38
Identities = 31/95 (32%), Positives = 35/95 (36%), Gaps = 26/95 (27%)
Query: 178 PTPASPNQGPPPQVPVSPGPPKDSS-----------------APGGPPERT-VTPALSSN 219
P P P QGPPP P P PP+ PG PP V PA
Sbjct: 307 PGPPPPQQGPPP--PPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPP 364
Query: 220 VLPRHLGSPATSVPGMGLHPPGPPLARPILPRERG 254
P + G P + G PP P RP P +RG
Sbjct: 365 --PTNSGMPTSDSRG---PPPTDPYGRP-PPYDRG 393
Score = 31.6 bits (70), Expect = 1.4
Identities = 27/70 (38%), Positives = 28/70 (40%), Gaps = 7/70 (10%)
Query: 178 PTPASPNQGPPPQVPVSP----GPPKDSSAPGGPPERTVTPALSSNVLPRHLGSPATSVP 233
P P P GPPP V P GPP P P P + P G P VP
Sbjct: 244 PGPPGP-PGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPG-PPPPVP 301
Query: 234 GMGLHPPGPP 243
G G PPGPP
Sbjct: 302 GYG-PPPGPP 310
Score = 29.3 bits (64), Expect = 7.2
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 177 SPTPASPNQGPPPQVPVSPGPPKDSSAPGGPPERTVTPA 215
S P S ++GPPP P PP D GPP R + A
Sbjct: 368 SGMPTSDSRGPPPTDPYGRPPPYD-RGDYGPPGREMDTA 405
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 42.0 bits (97), Expect = 0.001
Identities = 33/110 (30%), Positives = 40/110 (36%), Gaps = 21/110 (19%)
Query: 161 RPGQEIRQRTAAQRNLSPTPASPNQGPPPQVPVSPGPPKD----SSAPGGPPERTVT--- 213
RP Q R A L P +SP P P P SP P S P PP + T
Sbjct: 272 RPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLG 331
Query: 214 -------------PALSSNVLPRHLGSPATSVPGMGLHPPGPPLARPILP 250
P LS P PA ++P + PP PP + P+ P
Sbjct: 332 SPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQA-PPSPPASPPLSP 380
Score = 40.0 bits (92), Expect = 0.004
Identities = 35/119 (29%), Positives = 44/119 (36%), Gaps = 15/119 (12%)
Query: 145 KAKECEPPSAGAAVTARPGQEIRQRTAA---QRNLSPTPASPNQGP---PPQVPVSPGPP 198
+A P S + A P + A Q SP P+ P Q P P PVSP
Sbjct: 367 QAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSAT 426
Query: 199 KDSSAPGG--------PPERTVTPALSSNVLPRHLGSPATSVPGMGLHPPGPPLARPIL 249
S AP PP +P +S + P P + P + L P PP A P L
Sbjct: 427 PPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKP-PPQAPPAL 484
Score = 36.2 bits (82), Expect = 0.059
Identities = 26/102 (25%), Positives = 38/102 (37%), Gaps = 2/102 (1%)
Query: 151 PPSAGAAVTARPGQEIRQRTAAQRNLSPTPASPNQGPPP-QVPVSPGPPKDSSAPGGPPE 209
PPS P + LSP P Q PP +P PP ++P P
Sbjct: 322 PPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPL 381
Query: 210 RTVTPALSSNVLPRHLGSPATSVPGMGLHPP-GPPLARPILP 250
T +P + + L +P + P + P PP + P+ P
Sbjct: 382 ATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSP 423
Score = 34.7 bits (78), Expect = 0.17
Identities = 35/102 (34%), Positives = 42/102 (41%), Gaps = 14/102 (13%)
Query: 151 PPSAGAAVTARPGQEIRQRTAA---QRNLSPT---PASPNQGPPPQVPVSPGPPKDSSAP 204
PP A A+ P Q + A+ Q SP+ P SP PPPQ P P +
Sbjct: 477 PPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAP----PVLAAPLL 532
Query: 205 GGPPERTVTPALSSNVLPRHLGSPATSVPGMGLH---PPGPP 243
PP +P L + P G P TSV G L PGPP
Sbjct: 533 QVPPSPPASPTLQAPRRPPTPG-PDTSVSGPRLTLALAPGPP 573
Score = 33.9 bits (76), Expect = 0.29
Identities = 32/101 (31%), Positives = 42/101 (41%), Gaps = 21/101 (20%)
Query: 151 PPSAGAAVTARPGQEIRQRTAAQRNLSPTPASPNQGPPPQVPVSPGPPKDSSAPGGPPER 210
PPS A+ T + A +R +P P + GP + ++PGPP PP R
Sbjct: 535 PPSPPASPTLQ---------APRRPPTPGPDTSVSGPRLTLALAPGPPP-------PPSR 578
Query: 211 TVTPALSSNVLPRHLGSPATSVP----GMGLHPPGPPLARP 247
+ + LS L H S ATS P G P G A P
Sbjct: 579 SPSSTLSGPDLAGH-SSSATSTPEELRGYDSGPEGGAAASP 618
Score = 32.7 bits (73), Expect = 0.65
Identities = 31/107 (28%), Positives = 40/107 (37%), Gaps = 13/107 (12%)
Query: 152 PSAGAAVTARPGQEIRQRTAAQRNLSPTPASPNQGPPPQVPVSPGPPKDSSAPG------ 205
PSAG + RP +A + SP + P+ P+ P P PK
Sbjct: 219 PSAGGGLQ-RPASRSLSSSATPLS-SPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQV 276
Query: 206 GPPERTVTPA---LSSNVL--PRHLGSPATSVPGMGLHPPGPPLARP 247
PP + PA LSS+ L P P+ S P P PP P
Sbjct: 277 TPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPP 323
Score = 31.6 bits (70), Expect = 1.4
Identities = 34/126 (26%), Positives = 46/126 (36%), Gaps = 27/126 (21%)
Query: 151 PPSAGAAVTARPGQEIRQRTAAQRNLSPTPASPNQGPPP-------------QVPVS--- 194
PPS A P ++ A +SP+ P Q PPP Q P +
Sbjct: 427 PPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALAT 486
Query: 195 ------PGPPKDSSAPGGPP-ERTVTPALSSNVLPRHLGSPATSVPGMGLHPPGPPLARP 247
P PP +S PG P + + +S P P + P + + PP PP A P
Sbjct: 487 PPLQALPSPP--ASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQV-PPSPP-ASP 542
Query: 248 ILPRER 253
L R
Sbjct: 543 TLQAPR 548
>gi|19923345 RNA binding motif protein 12 [Homo sapiens]
Length = 932
Score = 42.0 bits (97), Expect = 0.001
Identities = 31/105 (29%), Positives = 43/105 (40%), Gaps = 15/105 (14%)
Query: 151 PPSAGAAVTARPGQEIRQRTAAQRN------LSPTPASPNQGPPPQVPVSPGPPKDSSAP 204
PP+ GA+ + TA+ N + P PA P+ P P +P P PP + P
Sbjct: 159 PPNMGASFGSPTFSSTVPSTASPMNTVPPPPIPPIPAMPSLPPMPSIPPIPVPPPVPTLP 218
Query: 205 GGPPERTVTPALSSNVLPRHLGSPATSVPGM-GLHPPGPPLARPI 248
PP + P S P T +P M G+ P PP P+
Sbjct: 219 PVPPVPPIPPVPSV--------PPMTPLPPMSGMPPLNPPPVAPL 255
Score = 31.2 bits (69), Expect = 1.9
Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Query: 172 AQRNLSPTPASPNQGPPPQVPVSPGPPKDSSAPGGPPERTVTPALSSNVLPRHLGSPATS 231
A +L P P+ P PP VP P P P P +TP + +P P
Sbjct: 195 AMPSLPPMPSIPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTPLPPMSGMPPLNPPPVAP 254
Query: 232 VPGMGLHPPGPPL 244
+P G++ G P+
Sbjct: 255 LPA-GMNGSGAPM 266
Score = 30.8 bits (68), Expect = 2.5
Identities = 25/83 (30%), Positives = 33/83 (39%), Gaps = 8/83 (9%)
Query: 186 GPPPQVPVSPGPPKDSSAPG---GPPERTVTPALSSNVLPRHLGSPATSVPGMGLHPPGP 242
GPP GPP SAPG GPP P P H+G P G PGP
Sbjct: 801 GPPG---FGSGPPGLGSAPGHLGGPPAFGPGPGPGPGPGPIHIGGPPGFASSSG--KPGP 855
Query: 243 PLARPILPRERGALDRIVEYLVG 265
+ + ++D I+++ G
Sbjct: 856 TVIKVQNMPFTVSIDEILDFFYG 878
>gi|23510462 RNA binding motif protein 12 [Homo sapiens]
Length = 932
Score = 42.0 bits (97), Expect = 0.001
Identities = 31/105 (29%), Positives = 43/105 (40%), Gaps = 15/105 (14%)
Query: 151 PPSAGAAVTARPGQEIRQRTAAQRN------LSPTPASPNQGPPPQVPVSPGPPKDSSAP 204
PP+ GA+ + TA+ N + P PA P+ P P +P P PP + P
Sbjct: 159 PPNMGASFGSPTFSSTVPSTASPMNTVPPPPIPPIPAMPSLPPMPSIPPIPVPPPVPTLP 218
Query: 205 GGPPERTVTPALSSNVLPRHLGSPATSVPGM-GLHPPGPPLARPI 248
PP + P S P T +P M G+ P PP P+
Sbjct: 219 PVPPVPPIPPVPSV--------PPMTPLPPMSGMPPLNPPPVAPL 255
Score = 31.2 bits (69), Expect = 1.9
Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Query: 172 AQRNLSPTPASPNQGPPPQVPVSPGPPKDSSAPGGPPERTVTPALSSNVLPRHLGSPATS 231
A +L P P+ P PP VP P P P P +TP + +P P
Sbjct: 195 AMPSLPPMPSIPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTPLPPMSGMPPLNPPPVAP 254
Query: 232 VPGMGLHPPGPPL 244
+P G++ G P+
Sbjct: 255 LPA-GMNGSGAPM 266
Score = 30.8 bits (68), Expect = 2.5
Identities = 25/83 (30%), Positives = 33/83 (39%), Gaps = 8/83 (9%)
Query: 186 GPPPQVPVSPGPPKDSSAPG---GPPERTVTPALSSNVLPRHLGSPATSVPGMGLHPPGP 242
GPP GPP SAPG GPP P P H+G P G PGP
Sbjct: 801 GPPG---FGSGPPGLGSAPGHLGGPPAFGPGPGPGPGPGPIHIGGPPGFASSSG--KPGP 855
Query: 243 PLARPILPRERGALDRIVEYLVG 265
+ + ++D I+++ G
Sbjct: 856 TVIKVQNMPFTVSIDEILDFFYG 878
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 42.0 bits (97), Expect = 0.001
Identities = 25/66 (37%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Query: 178 PTPASPNQGPPPQVPVSPGPPKDSSAPGGPPERTVTPALSSNVLPRHLGSPATSVPGMGL 237
P P QGPPPQ P P P GPP + + + SS P G P P G
Sbjct: 257 PPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPP---GKPQGPPPQGGN 313
Query: 238 HPPGPP 243
P GPP
Sbjct: 314 QPQGPP 319
Score = 41.6 bits (96), Expect = 0.001
Identities = 25/66 (37%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Query: 178 PTPASPNQGPPPQVPVSPGPPKDSSAPGGPPERTVTPALSSNVLPRHLGSPATSVPGMGL 237
P P QGPPPQ P P P GPP + + SS P G P P G
Sbjct: 133 PPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPP---GKPQGPPPQGGN 189
Query: 238 HPPGPP 243
P GPP
Sbjct: 190 QPQGPP 195
Score = 40.4 bits (93), Expect = 0.003
Identities = 24/66 (36%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Query: 178 PTPASPNQGPPPQVPVSPGPPKDSSAPGGPPERTVTPALSSNVLPRHLGSPATSVPGMGL 237
P P QGPPPQ P P P GPP + + S+ P G P P G
Sbjct: 195 PPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPP---GKPQGPPPQGGN 251
Query: 238 HPPGPP 243
P GPP
Sbjct: 252 QPQGPP 257
Score = 38.5 bits (88), Expect = 0.012
Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Query: 178 PTPASPNQGPPPQVPVSPGPPKDSSAPGGPPERTVTPALSSNVLPRHLGSPATSVPGMGL 237
P P QGPPPQ P P P GPP + + + S+ P G P G
Sbjct: 319 PPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPP---GKPQGPPQQEGN 375
Query: 238 HPPGPP 243
+P GPP
Sbjct: 376 NPQGPP 381
Score = 37.4 bits (85), Expect = 0.026
Identities = 25/67 (37%), Positives = 26/67 (38%), Gaps = 6/67 (8%)
Query: 178 PTPASPNQGPPPQVPVSPGPPKDSSAPGGPPERTVTPALSSNVLPRH-LGSPATSVPGMG 236
P P QGPPPQ P P P GPP P + PR G P P G
Sbjct: 72 PPPPGKPQGPPPQGGNKPQGPPPPGKPQGPP-----PQGDKSRSPRSPPGKPQGPPPQGG 126
Query: 237 LHPPGPP 243
P GPP
Sbjct: 127 NQPQGPP 133
Score = 33.1 bits (74), Expect = 0.50
Identities = 26/89 (29%), Positives = 34/89 (38%), Gaps = 5/89 (5%)
Query: 156 AAVTARPGQEIRQRTAAQRNLSPTPASPNQGPPPQVPVSP-GPPKDSSAPGGPPERTVTP 214
A + Q + + + + + S +P QG PPQ P GPP P GPP +
Sbjct: 9 ALLALSSAQNLNEDVSQEESPSLIAGNP-QGAPPQGGNKPQGPPSPPGKPQGPPPQGGNQ 67
Query: 215 ALSSNVLPRHLGSPATSVPGMGLHPPGPP 243
P G P P G P GPP
Sbjct: 68 PQGP---PPPPGKPQGPPPQGGNKPQGPP 93
Score = 32.7 bits (73), Expect = 0.65
Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 7/59 (11%)
Query: 151 PPSAGAAVTARPGQEIRQRTAAQRNLSPTPASPNQGPPPQVPVSP-GPPKDSSAPGGPP 208
PP G P + + R+ S +P QGPPPQ P GPP P GPP
Sbjct: 153 PPPPGKPQGPPPQGDNKSRS------SRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPP 205
Score = 32.7 bits (73), Expect = 0.65
Identities = 25/74 (33%), Positives = 28/74 (37%), Gaps = 7/74 (9%)
Query: 177 SPTPASPNQGPPPQVPVSP-GPPKDSSAPGGPP------ERTVTPALSSNVLPRHLGSPA 229
S +P QGPPPQ P GPP P GPP + P P GS +
Sbjct: 297 SRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKS 356
Query: 230 TSVPGMGLHPPGPP 243
S P GPP
Sbjct: 357 RSARSPPGKPQGPP 370
>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
Length = 1094
Score = 42.0 bits (97), Expect = 0.001
Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 177 SPTPASPNQGPPPQVPVSPGPPKDSSAPGGP-PERTVTPALSSNVLPRHLGSPATSVPGM 235
SP PA+P P VP P D+S P P+ T+TP S V+ + P + P
Sbjct: 679 SPNPAAPALAAPAVVP-GPVSTTDASPQSPPTPQTTLTPLQESPVISKDQSPPPSPPP-- 735
Query: 236 GLHPPGPPLARP 247
HPP PP +P
Sbjct: 736 SYHPPPPPTKKP 747
Score = 39.3 bits (90), Expect = 0.007
Identities = 34/116 (29%), Positives = 42/116 (36%), Gaps = 17/116 (14%)
Query: 152 PSAGAAVTARPGQEIRQRTAAQRNLSPTPASPNQGPPPQVPVSPGP----------PKDS 201
PS + + P TA Q +P P PP P S P P
Sbjct: 805 PSGSPELVSSPAASSSSATALQIQPPGSP-DPPPAPPAPAPASSAPGHVAKLPQKEPVGC 863
Query: 202 SAPGGPPER-----TVTPALSSNVLPRHLGSP-ATSVPGMGLHPPGPPLARPILPR 251
S GGPP VTP+L V R +G+P P +G P PL R + R
Sbjct: 864 SKGGGPPREDVGAPLVTPSLLQMVRLRSVGAPGGAPTPALGPSAPQKPLRRALSGR 919
Score = 31.2 bits (69), Expect = 1.9
Identities = 25/80 (31%), Positives = 31/80 (38%), Gaps = 18/80 (22%)
Query: 178 PTPASPNQG------PPPQVPVSPGPPKDSSAPGGPPERTVTPALSSNVLPRHLGSPATS 231
P PA Q PPP+ + + P G PE +PA SS S AT+
Sbjct: 773 PPPAPEEQDLSMADFPPPEEAFFSVASPEPAGPSGSPELVSSPAASS--------SSATA 824
Query: 232 V----PGMGLHPPGPPLARP 247
+ PG PP PP P
Sbjct: 825 LQIQPPGSPDPPPAPPAPAP 844
Score = 30.4 bits (67), Expect = 3.2
Identities = 35/126 (27%), Positives = 46/126 (36%), Gaps = 21/126 (16%)
Query: 146 AKECEPPSAGAAVTA-RPGQEIRQRTAAQRNLSP---------TPASPNQG--PPPQVPV 193
A C P A + V PG R + +R LSP TP P +G PP P
Sbjct: 547 AAPCPPNPANSWVPGLSPGGSRRPPRSPERTLSPSSGYSSQSGTPTLPPKGLAGPPASPG 606
Query: 194 SPGPPKDS-----SAPGGPPERTVTP--ALSSNVLPRHLGSPATSVP--GMGLHPPGPPL 244
PPK +PG ++T + SS+ P P P + PP P +
Sbjct: 607 KAQPPKPERVTSLRSPGASVSSSLTSLCSSSSDPAPSDRSGPQILTPLGDRFVIPPHPKV 666
Query: 245 ARPILP 250
P P
Sbjct: 667 PAPFSP 672
Score = 29.3 bits (64), Expect = 7.2
Identities = 34/131 (25%), Positives = 43/131 (32%), Gaps = 36/131 (27%)
Query: 152 PSAGAAVTARPGQEIRQRTAAQRNLSPTPASPNQGPPPQVPVSPGPP---------KDSS 202
P A A ++ PG A P S GPP + +P +
Sbjct: 839 PPAPAPASSAPGH-----VAKLPQKEPVGCSKGGGPPREDVGAPLVTPSLLQMVRLRSVG 893
Query: 203 APGGPPERTVTPALSSNVLPRHLGSPATSV--PGMGLH--------------------PP 240
APGG P + P+ L R L A+ V P GLH P
Sbjct: 894 APGGAPTPALGPSAPQKPLRRALSGRASPVPAPSSGLHAAVRLKACSLAASEGLSSAQPN 953
Query: 241 GPPLARPILPR 251
GPP A P P+
Sbjct: 954 GPPEAEPRPPQ 964
>gi|11415052 retinoid X receptor, beta [Homo sapiens]
Length = 533
Score = 41.6 bits (96), Expect = 0.001
Identities = 38/110 (34%), Positives = 47/110 (42%), Gaps = 26/110 (23%)
Query: 144 KKAKECEPPSAGAAVTARPGQEIRQRTAAQRNLSPTPASPN---QG-PPPQVPVSPGPPK 199
++ E EP AG G++ R SP +SPN QG PPP P P PP
Sbjct: 58 QQTPEPEPGEAGRDGMGDSGRDSR---------SPDSSSPNPLPQGVPPPSPPGPPLPPS 108
Query: 200 DSSAPGG----PPERTVTPALSS--NVLPRHLGSPATSVPGMGLHPPGPP 243
+ + GG PP P L S V+ +GSP GL PP PP
Sbjct: 109 TAPSLGGSGAPPPPPMPPPPLGSPFPVISSSMGSP-------GLPPPAPP 151
Score = 35.0 bits (79), Expect = 0.13
Identities = 29/101 (28%), Positives = 35/101 (34%), Gaps = 3/101 (2%)
Query: 140 DPDSKKAKECEPPSAGAAVTARPGQEIRQRTAAQRNLSPTPASPNQGPPPQVPVSPGPPK 199
D S + P G + PG + TA S P P PPP P
Sbjct: 79 DSRSPDSSSPNPLPQGVPPPSPPGPPLPPSTAPSLGGSGAPPPPPMPPPPLGSPFPVISS 138
Query: 200 DSSAPGGPPERTVTPALSSNVLPRHLGSPATSVPGMGLHPP 240
+PG PP P S V + S S+PG G PP
Sbjct: 139 SMGSPGLPP--PAPPGFSGPVSSPQINS-TVSLPGGGSGPP 176
>gi|149999378 inverted formin 2 isoform 2 [Homo sapiens]
Length = 1240
Score = 41.6 bits (96), Expect = 0.001
Identities = 33/108 (30%), Positives = 48/108 (44%), Gaps = 10/108 (9%)
Query: 144 KKAKECEPPSAGAAVTA--RPGQEIRQRTAAQRNLSPTPASPNQGPPPQVPVSPGPPKDS 201
K + E + P+A AA E + + R L ++P PPP P+ PG S
Sbjct: 380 KPSVEGQQPAAAAACEPVDHAQSESILKVSQPRALEQQASTPPPPPPP--PLLPG---SS 434
Query: 202 SAPGGPPERTVTPALSSNVLPRHLGSPATSVPGMGLH-PPGPPLARPI 248
+ P PP P++ + LP P +PG+G PP PPL P+
Sbjct: 435 AEPPPPPPPPPLPSVGAKALPT--APPPPPLPGLGAMAPPAPPLPPPL 480
Score = 36.2 bits (82), Expect = 0.059
Identities = 21/67 (31%), Positives = 26/67 (38%), Gaps = 2/67 (2%)
Query: 178 PTPASPNQGPPPQVPVSPGPPKDSSAPGGPPERTVTPALSSNVLPRHLGSPATSVPGMGL 237
P P P+ G P PP PP + P L + L P +PG+G
Sbjct: 442 PPPPLPSVGAKALPTAPPPPPLPGLGAMAPPAPPLPPPLPGSC--EFLPPPPPPLPGLGC 499
Query: 238 HPPGPPL 244
PP PPL
Sbjct: 500 PPPPPPL 506
Score = 36.2 bits (82), Expect = 0.059
Identities = 28/79 (35%), Positives = 31/79 (39%), Gaps = 17/79 (21%)
Query: 181 ASPNQGPPPQVP-----VSPGPPKDSSAPGG----PPERTVTPALSSNVLPRHLGSPATS 231
A P PPP +P P PP PG PP P L P L
Sbjct: 453 ALPTAPPPPPLPGLGAMAPPAPPLPPPLPGSCEFLPPPPPPLPGLGCPPPPPPL------ 506
Query: 232 VPGMGLHPPGPPLARPILP 250
+PGMG PP PP P+LP
Sbjct: 507 LPGMGWGPPPPP--PPLLP 523
>gi|149999380 inverted formin 2 isoform 1 [Homo sapiens]
Length = 1249
Score = 41.6 bits (96), Expect = 0.001
Identities = 33/108 (30%), Positives = 48/108 (44%), Gaps = 10/108 (9%)
Query: 144 KKAKECEPPSAGAAVTA--RPGQEIRQRTAAQRNLSPTPASPNQGPPPQVPVSPGPPKDS 201
K + E + P+A AA E + + R L ++P PPP P+ PG S
Sbjct: 380 KPSVEGQQPAAAAACEPVDHAQSESILKVSQPRALEQQASTPPPPPPP--PLLPG---SS 434
Query: 202 SAPGGPPERTVTPALSSNVLPRHLGSPATSVPGMGLH-PPGPPLARPI 248
+ P PP P++ + LP P +PG+G PP PPL P+
Sbjct: 435 AEPPPPPPPPPLPSVGAKALPT--APPPPPLPGLGAMAPPAPPLPPPL 480
Score = 36.2 bits (82), Expect = 0.059
Identities = 21/67 (31%), Positives = 26/67 (38%), Gaps = 2/67 (2%)
Query: 178 PTPASPNQGPPPQVPVSPGPPKDSSAPGGPPERTVTPALSSNVLPRHLGSPATSVPGMGL 237
P P P+ G P PP PP + P L + L P +PG+G
Sbjct: 442 PPPPLPSVGAKALPTAPPPPPLPGLGAMAPPAPPLPPPLPGSC--EFLPPPPPPLPGLGC 499
Query: 238 HPPGPPL 244
PP PPL
Sbjct: 500 PPPPPPL 506
Score = 36.2 bits (82), Expect = 0.059
Identities = 28/79 (35%), Positives = 31/79 (39%), Gaps = 17/79 (21%)
Query: 181 ASPNQGPPPQVP-----VSPGPPKDSSAPGG----PPERTVTPALSSNVLPRHLGSPATS 231
A P PPP +P P PP PG PP P L P L
Sbjct: 453 ALPTAPPPPPLPGLGAMAPPAPPLPPPLPGSCEFLPPPPPPLPGLGCPPPPPPL------ 506
Query: 232 VPGMGLHPPGPPLARPILP 250
+PGMG PP PP P+LP
Sbjct: 507 LPGMGWGPPPPP--PPLLP 523
>gi|40807447 papillary renal cell carcinoma translocation-associated
gene product isoform 1 [Homo sapiens]
Length = 491
Score = 41.6 bits (96), Expect = 0.001
Identities = 35/108 (32%), Positives = 45/108 (41%), Gaps = 14/108 (12%)
Query: 151 PPSAGAAVTARPGQEIRQRTAAQRNLSPTPASPNQGPPPQVPVSPGPPKDSSAPGGPPER 210
P G A+ P Q + L P P PPP +P G G PP
Sbjct: 43 PAPKGPALLPPPPQMLAPAFPPPLLLPPPTGDPRLQPPPPLPFGLG--------GFPPPP 94
Query: 211 TVTPALSSNV-LPRHLGSPATSVPGMGLHPP----GPPLARPILPRER 253
V+PA ++ V LG P+ PG+ L PP GPPL P P++R
Sbjct: 95 GVSPAEAAGVGEGLGLGLPSPRGPGLNLPPPIGGAGPPLGLP-KPKKR 141
>gi|40807450 papillary renal cell carcinoma translocation-associated
gene product isoform 2 [Homo sapiens]
Length = 459
Score = 41.6 bits (96), Expect = 0.001
Identities = 35/108 (32%), Positives = 45/108 (41%), Gaps = 14/108 (12%)
Query: 151 PPSAGAAVTARPGQEIRQRTAAQRNLSPTPASPNQGPPPQVPVSPGPPKDSSAPGGPPER 210
P G A+ P Q + L P P PPP +P G G PP
Sbjct: 43 PAPKGPALLPPPPQMLAPAFPPPLLLPPPTGDPRLQPPPPLPFGLG--------GFPPPP 94
Query: 211 TVTPALSSNV-LPRHLGSPATSVPGMGLHPP----GPPLARPILPRER 253
V+PA ++ V LG P+ PG+ L PP GPPL P P++R
Sbjct: 95 GVSPAEAAGVGEGLGLGLPSPRGPGLNLPPPIGGAGPPLGLP-KPKKR 141
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 41.2 bits (95), Expect = 0.002
Identities = 47/166 (28%), Positives = 62/166 (37%), Gaps = 36/166 (21%)
Query: 110 DDLKSQRKKILEEVMEKE------TYKTAKLILERFDPDSKKAKECE-----PPSAGAAV 158
D L S++++I E + E T + AKL E D + A PPS +
Sbjct: 512 DALHSEKQQIATEKQDLEAEVSQLTGEVAKLTKELEDAKKEMASLSAAAITVPPSVPSRA 571
Query: 159 TARPGQEIRQRTAAQRNLSPTPASPNQGPPPQVPVSPGPP--------KDSSAPGG---- 206
P + + P P PPP P P PP S PGG
Sbjct: 572 PVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAIS 631
Query: 207 PPERTVTPALSSNV-------LPRHLGSPA-TSVPGMGLHPPGPPL 244
PP P LS + LP +G P+ +S+PG PP PPL
Sbjct: 632 PP-----PPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPL 672
Score = 37.4 bits (85), Expect = 0.026
Identities = 26/73 (35%), Positives = 31/73 (42%), Gaps = 8/73 (10%)
Query: 176 LSPTPASPNQG---PPPQVPVSPGPPKDSSAPGGPPERTVTPALSSNVLPRHLGSPATSV 232
+SP P PPP +P G P SS PGG P S +P P +
Sbjct: 630 ISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIP----PPPPPL 685
Query: 233 PG-MGLHPPGPPL 244
PG G+ PP PPL
Sbjct: 686 PGSAGIPPPPPPL 698
Score = 36.2 bits (82), Expect = 0.059
Identities = 32/112 (28%), Positives = 35/112 (31%), Gaps = 16/112 (14%)
Query: 141 PDSKKAKECEPPSAGAAVTARPGQEIRQRTAAQRNLSPTPASPNQGPPPQVPVSPGPPKD 200
P S + PP G+A P + P P P PPP P PG P
Sbjct: 673 PGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPP 732
Query: 201 SSAPGGPPERTVTPALSSNVLPRHLGSPATSVPGMGLHP-----PGPPLARP 247
G PP P G PA V GL P P L RP
Sbjct: 733 PPGMGMPPPP-----------PFGFGVPAAPVLPFGLTPKKLYKPEVQLRRP 773
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.133 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,625,608
Number of Sequences: 37866
Number of extensions: 1295554
Number of successful extensions: 16395
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 318
Number of HSP's successfully gapped in prelim test: 1110
Number of HSP's that attempted gapping in prelim test: 9840
Number of HSP's gapped (non-prelim): 5483
length of query: 428
length of database: 18,247,518
effective HSP length: 105
effective length of query: 323
effective length of database: 14,271,588
effective search space: 4609722924
effective search space used: 4609722924
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.