STT3B 25274

Name: STT3B	Sequence: fasta or formatted (826aa)		NCBI GI: 30578410
Description: source of immunodominant MHC-associated peptides		Referenced in: Protein Glycosylation
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.9 65 3 C cysteine 1.3 11 3 D aspartate 4.0 33 2 E glutamate 4.0 33 2 F phenylalanine 6.5 54 3 G glycine 7.0 58 2 H histidine 3.1 26 2 I isoleucine 6.3 52 2 K lysine 5.2 43 2 L leucine 9.4 78 3 M methionine 3.0 25 2 N asparagine 4.0 33 2 P proline 4.1 34 2 Q glutamine 2.4 20 1 R arginine 4.6 38 1 S serine 7.3 60 2 T threonine 5.7 47 2 V valine 6.5 54 2 W tryptophan 2.7 22 2 Y tyrosine 4.8 40 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 source of immunodominant MHC-associated peptides [Ho... STT3A 0.503 integral membrane protein 1 IRF7 0.005 interferon regulatory factor 7 isoform d IRF7 0.005 interferon regulatory factor 7 isoform a IRF7 0.005 interferon regulatory factor 7 isoform b SALL3 0.005 sal-like 3 DDX11 0.005 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 iso... NPHS2 0.005 podocin STOM 0.005 stomatin isoform b LAMA1 0.004 laminin, alpha 1 precursor STOM 0.004 stomatin isoform a FTO 0.004 fat mass and obesity associated STOML3 0.004 stomatin-like 3 isoform 2 STOML3 0.004 stomatin-like 3 isoform 1 LOC100287930 0.003 PREDICTED: similar to Putative uncharacterized prot... TNKS 0.003 tankyrase, TRF1-interacting ankyrin-related ADP-ribo... IL17RB 0.003 interleukin 17B receptor precursor CHGB 0.003 chromogranin B precursor ZCCHC14 0.003 zinc finger, CCHC domain containing 14 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.