Search of human proteins with 37693993

Search of human proteins with 37693993

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|37693993 nucleoside diphosphate kinase 3 [Homo sapiens]
         (169 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|37693993 nucleoside diphosphate kinase 3 [Homo sapiens]            344   2e-95
gi|38045913 non-metastatic cells 1, protein (NM23A) expressed in...   222   1e-58
gi|4557797 non-metastatic cells 1, protein (NM23A) expressed in ...   222   1e-58
gi|66392227 nucleoside diphosphate kinase B [Homo sapiens]            217   4e-57
gi|66392205 nucleoside diphosphate kinase B [Homo sapiens]            217   4e-57
gi|66392192 nucleoside diphosphate kinase B [Homo sapiens]            217   4e-57
gi|4505409 nucleoside diphosphate kinase B [Homo sapiens]             217   4e-57
gi|66392203 NME1-NME2 protein [Homo sapiens]                          217   4e-57
gi|4826862 nucleoside diphosphate kinase 4 [Homo sapiens]             198   2e-51
gi|5031951 nucleoside diphosphate kinase type 6 [Homo sapiens]         75   2e-14
gi|37574614 nucleoside diphosphate kinase 7 isoform b [Homo sapi...    74   8e-14
gi|7019465 nucleoside diphosphate kinase 7 isoform a [Homo sapiens]    74   8e-14
gi|4505413 non-metastatic cells 5, protein expressed in (nucleos...    60   1e-09
gi|30023828 thioredoxin domain containing 6 [Homo sapiens]             59   3e-09
gi|148839372 thioredoxin domain containing 3 [Homo sapiens]            55   4e-08
gi|57164951 non imprinted in Prader-Willi/Angelman syndrome 2 is...    28   2.9  
gi|57013272 non imprinted in Prader-Willi/Angelman syndrome 2 is...    28   2.9  
gi|57164953 non imprinted in Prader-Willi/Angelman syndrome 2 is...    28   2.9  
gi|57013274 non imprinted in Prader-Willi/Angelman syndrome 2 is...    28   2.9  
gi|223005922 leucine rich repeat containing 10-like [Homo sapiens]     27   6.4  
gi|51702222 SPT2, Suppressor of Ty, domain containing 1 [Homo sa...    27   6.4  
gi|237512982 voltage-gated sodium channel type V alpha isoform f...    27   8.4  
gi|237512980 voltage-gated sodium channel type V alpha isoform e...    27   8.4  
gi|37622907 voltage-gated sodium channel type V alpha isoform a ...    27   8.4  
gi|30089970 voltage-gated sodium channel type V alpha isoform b ...    27   8.4  
gi|150417969 voltage-gated sodium channel type V alpha isoform d...    27   8.4  
gi|150417967 voltage-gated sodium channel type V alpha isoform c...    27   8.4  
gi|239748090 PREDICTED: similar to sodium channel, voltage-gated...    27   8.4  

>gi|37693993 nucleoside diphosphate kinase 3 [Homo sapiens]
          Length = 169

 Score =  344 bits (883), Expect = 2e-95
 Identities = 169/169 (100%), Positives = 169/169 (100%)

Query: 1   MICLVLTIFANLFPAACTGAHERTFLAVKPDGVQRRLVGEIVRRFERKGFKLVALKLVQA 60
           MICLVLTIFANLFPAACTGAHERTFLAVKPDGVQRRLVGEIVRRFERKGFKLVALKLVQA
Sbjct: 1   MICLVLTIFANLFPAACTGAHERTFLAVKPDGVQRRLVGEIVRRFERKGFKLVALKLVQA 60

Query: 61  SEELLREHYAELRERPFYGRLVKYMASGPVVAMVWQGLDVVRTSRALIGATNPADAPPGT 120
           SEELLREHYAELRERPFYGRLVKYMASGPVVAMVWQGLDVVRTSRALIGATNPADAPPGT
Sbjct: 61  SEELLREHYAELRERPFYGRLVKYMASGPVVAMVWQGLDVVRTSRALIGATNPADAPPGT 120

Query: 121 IRGDFCIEVGKNLIHGSDSVESARREIALWFRADELLCWEDSAGHWLYE 169
           IRGDFCIEVGKNLIHGSDSVESARREIALWFRADELLCWEDSAGHWLYE
Sbjct: 121 IRGDFCIEVGKNLIHGSDSVESARREIALWFRADELLCWEDSAGHWLYE 169


>gi|38045913 non-metastatic cells 1, protein (NM23A) expressed in
           isoform a [Homo sapiens]
          Length = 177

 Score =  222 bits (566), Expect = 1e-58
 Identities = 100/148 (67%), Positives = 128/148 (86%)

Query: 22  ERTFLAVKPDGVQRRLVGEIVRRFERKGFKLVALKLVQASEELLREHYAELRERPFYGRL 81
           ERTF+A+KPDGVQR LVGEI++RFE+KGF+LV LK +QASE+LL+EHY +L++RPF+  L
Sbjct: 30  ERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVGLKFMQASEDLLKEHYVDLKDRPFFAGL 89

Query: 82  VKYMASGPVVAMVWQGLDVVRTSRALIGATNPADAPPGTIRGDFCIEVGKNLIHGSDSVE 141
           VKYM SGPVVAMVW+GL+VV+T R ++G TNPAD+ PGTIRGDFCI+VG+N+IHGSDSVE
Sbjct: 90  VKYMHSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVE 149

Query: 142 SARREIALWFRADELLCWEDSAGHWLYE 169
           SA +EI LWF  +EL+ +   A +W+YE
Sbjct: 150 SAEKEIGLWFHPEELVDYTSCAQNWIYE 177


>gi|4557797 non-metastatic cells 1, protein (NM23A) expressed in
           isoform b [Homo sapiens]
          Length = 152

 Score =  222 bits (566), Expect = 1e-58
 Identities = 100/148 (67%), Positives = 128/148 (86%)

Query: 22  ERTFLAVKPDGVQRRLVGEIVRRFERKGFKLVALKLVQASEELLREHYAELRERPFYGRL 81
           ERTF+A+KPDGVQR LVGEI++RFE+KGF+LV LK +QASE+LL+EHY +L++RPF+  L
Sbjct: 5   ERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVGLKFMQASEDLLKEHYVDLKDRPFFAGL 64

Query: 82  VKYMASGPVVAMVWQGLDVVRTSRALIGATNPADAPPGTIRGDFCIEVGKNLIHGSDSVE 141
           VKYM SGPVVAMVW+GL+VV+T R ++G TNPAD+ PGTIRGDFCI+VG+N+IHGSDSVE
Sbjct: 65  VKYMHSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVE 124

Query: 142 SARREIALWFRADELLCWEDSAGHWLYE 169
           SA +EI LWF  +EL+ +   A +W+YE
Sbjct: 125 SAEKEIGLWFHPEELVDYTSCAQNWIYE 152


>gi|66392227 nucleoside diphosphate kinase B [Homo sapiens]
          Length = 152

 Score =  217 bits (552), Expect = 4e-57
 Identities = 97/148 (65%), Positives = 130/148 (87%)

Query: 22  ERTFLAVKPDGVQRRLVGEIVRRFERKGFKLVALKLVQASEELLREHYAELRERPFYGRL 81
           ERTF+A+KPDGVQR LVGEI++RFE+KGF+LVA+K ++ASEE L++HY +L++RPF+  L
Sbjct: 5   ERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQHYIDLKDRPFFPGL 64

Query: 82  VKYMASGPVVAMVWQGLDVVRTSRALIGATNPADAPPGTIRGDFCIEVGKNLIHGSDSVE 141
           VKYM SGPVVAMVW+GL+VV+T R ++G TNPAD+ PGTIRGDFCI+VG+N+IHGSDSV+
Sbjct: 65  VKYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVK 124

Query: 142 SARREIALWFRADELLCWEDSAGHWLYE 169
           SA +EI+LWF+ +EL+ ++  A  W+YE
Sbjct: 125 SAEKEISLWFKPEELVDYKSCAHDWVYE 152


>gi|66392205 nucleoside diphosphate kinase B [Homo sapiens]
          Length = 152

 Score =  217 bits (552), Expect = 4e-57
 Identities = 97/148 (65%), Positives = 130/148 (87%)

Query: 22  ERTFLAVKPDGVQRRLVGEIVRRFERKGFKLVALKLVQASEELLREHYAELRERPFYGRL 81
           ERTF+A+KPDGVQR LVGEI++RFE+KGF+LVA+K ++ASEE L++HY +L++RPF+  L
Sbjct: 5   ERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQHYIDLKDRPFFPGL 64

Query: 82  VKYMASGPVVAMVWQGLDVVRTSRALIGATNPADAPPGTIRGDFCIEVGKNLIHGSDSVE 141
           VKYM SGPVVAMVW+GL+VV+T R ++G TNPAD+ PGTIRGDFCI+VG+N+IHGSDSV+
Sbjct: 65  VKYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVK 124

Query: 142 SARREIALWFRADELLCWEDSAGHWLYE 169
           SA +EI+LWF+ +EL+ ++  A  W+YE
Sbjct: 125 SAEKEISLWFKPEELVDYKSCAHDWVYE 152


>gi|66392192 nucleoside diphosphate kinase B [Homo sapiens]
          Length = 152

 Score =  217 bits (552), Expect = 4e-57
 Identities = 97/148 (65%), Positives = 130/148 (87%)

Query: 22  ERTFLAVKPDGVQRRLVGEIVRRFERKGFKLVALKLVQASEELLREHYAELRERPFYGRL 81
           ERTF+A+KPDGVQR LVGEI++RFE+KGF+LVA+K ++ASEE L++HY +L++RPF+  L
Sbjct: 5   ERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQHYIDLKDRPFFPGL 64

Query: 82  VKYMASGPVVAMVWQGLDVVRTSRALIGATNPADAPPGTIRGDFCIEVGKNLIHGSDSVE 141
           VKYM SGPVVAMVW+GL+VV+T R ++G TNPAD+ PGTIRGDFCI+VG+N+IHGSDSV+
Sbjct: 65  VKYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVK 124

Query: 142 SARREIALWFRADELLCWEDSAGHWLYE 169
           SA +EI+LWF+ +EL+ ++  A  W+YE
Sbjct: 125 SAEKEISLWFKPEELVDYKSCAHDWVYE 152


>gi|4505409 nucleoside diphosphate kinase B [Homo sapiens]
          Length = 152

 Score =  217 bits (552), Expect = 4e-57
 Identities = 97/148 (65%), Positives = 130/148 (87%)

Query: 22  ERTFLAVKPDGVQRRLVGEIVRRFERKGFKLVALKLVQASEELLREHYAELRERPFYGRL 81
           ERTF+A+KPDGVQR LVGEI++RFE+KGF+LVA+K ++ASEE L++HY +L++RPF+  L
Sbjct: 5   ERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQHYIDLKDRPFFPGL 64

Query: 82  VKYMASGPVVAMVWQGLDVVRTSRALIGATNPADAPPGTIRGDFCIEVGKNLIHGSDSVE 141
           VKYM SGPVVAMVW+GL+VV+T R ++G TNPAD+ PGTIRGDFCI+VG+N+IHGSDSV+
Sbjct: 65  VKYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVK 124

Query: 142 SARREIALWFRADELLCWEDSAGHWLYE 169
           SA +EI+LWF+ +EL+ ++  A  W+YE
Sbjct: 125 SAEKEISLWFKPEELVDYKSCAHDWVYE 152


>gi|66392203 NME1-NME2 protein [Homo sapiens]
          Length = 267

 Score =  217 bits (552), Expect = 4e-57
 Identities = 97/148 (65%), Positives = 130/148 (87%)

Query: 22  ERTFLAVKPDGVQRRLVGEIVRRFERKGFKLVALKLVQASEELLREHYAELRERPFYGRL 81
           ERTF+A+KPDGVQR LVGEI++RFE+KGF+LVA+K ++ASEE L++HY +L++RPF+  L
Sbjct: 120 ERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQHYIDLKDRPFFPGL 179

Query: 82  VKYMASGPVVAMVWQGLDVVRTSRALIGATNPADAPPGTIRGDFCIEVGKNLIHGSDSVE 141
           VKYM SGPVVAMVW+GL+VV+T R ++G TNPAD+ PGTIRGDFCI+VG+N+IHGSDSV+
Sbjct: 180 VKYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVK 239

Query: 142 SARREIALWFRADELLCWEDSAGHWLYE 169
           SA +EI+LWF+ +EL+ ++  A  W+YE
Sbjct: 240 SAEKEISLWFKPEELVDYKSCAHDWVYE 267



 Score =  175 bits (443), Expect = 2e-44
 Identities = 78/112 (69%), Positives = 100/112 (89%)

Query: 22  ERTFLAVKPDGVQRRLVGEIVRRFERKGFKLVALKLVQASEELLREHYAELRERPFYGRL 81
           ERTF+A+KPDGVQR LVGEI++RFE+KGF+LV LK +QASE+LL+EHY +L++RPF+  L
Sbjct: 5   ERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVGLKFMQASEDLLKEHYVDLKDRPFFAGL 64

Query: 82  VKYMASGPVVAMVWQGLDVVRTSRALIGATNPADAPPGTIRGDFCIEVGKNL 133
           VKYM SGPVVAMVW+GL+VV+T R ++G TNPAD+ PGTIRGDFCI+VG+ +
Sbjct: 65  VKYMHSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRTM 116


>gi|4826862 nucleoside diphosphate kinase 4 [Homo sapiens]
          Length = 187

 Score =  198 bits (503), Expect = 2e-51
 Identities = 89/144 (61%), Positives = 117/144 (81%)

Query: 22  ERTFLAVKPDGVQRRLVGEIVRRFERKGFKLVALKLVQASEELLREHYAELRERPFYGRL 81
           ERT +AVKPDGVQRRLVG++++RFER+GF LV +K++QA E +L EHY +LR +PFY  L
Sbjct: 38  ERTLVAVKPDGVQRRLVGDVIQRFERRGFTLVGMKMLQAPESVLAEHYQDLRRKPFYPAL 97

Query: 82  VKYMASGPVVAMVWQGLDVVRTSRALIGATNPADAPPGTIRGDFCIEVGKNLIHGSDSVE 141
           ++YM+SGPVVAMVW+G +VVR SRA+IG T+ A+A PGTIRGDF + + +N+IH SDSVE
Sbjct: 98  IRYMSSGPVVAMVWEGYNVVRASRAMIGHTDSAEAAPGTIRGDFSVHISRNVIHASDSVE 157

Query: 142 SARREIALWFRADELLCWEDSAGH 165
            A+REI LWF++ EL+ W D   H
Sbjct: 158 GAQREIQLWFQSSELVSWADGGQH 181


>gi|5031951 nucleoside diphosphate kinase type 6 [Homo sapiens]
          Length = 194

 Score = 75.5 bits (184), Expect = 2e-14
 Identities = 51/136 (37%), Positives = 73/136 (53%), Gaps = 4/136 (2%)

Query: 20  AHERTFLAVKPDGVQRRLVGEIV-RRFERKGFKLVALKLVQASEELLREHYAELRERPFY 78
           A + T   +KPD V   L+ E V ++     F +V ++ +   +E  +  Y E   R FY
Sbjct: 18  ALQLTLALIKPDAVAHPLILEAVHQQILSNKFLIVRMRELLWRKEDCQRFYREHEGRFFY 77

Query: 79  GRLVKYMASGPVVAMVWQGLDVVRTSRALIGATNPADA---PPGTIRGDFCIEVGKNLIH 135
            RLV++MASGP+ A +    D ++  R L+G T    A    P +IRG F +   +N  H
Sbjct: 78  QRLVEFMASGPIRAYILAHKDAIQLWRTLMGPTRVFRARHVAPDSIRGSFGLTDTRNTTH 137

Query: 136 GSDSVESARREIALWF 151
           GSDSV SA REIA +F
Sbjct: 138 GSDSVVSASREIAAFF 153


>gi|37574614 nucleoside diphosphate kinase 7 isoform b [Homo
           sapiens]
          Length = 340

 Score = 73.6 bits (179), Expect = 8e-14
 Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 6/152 (3%)

Query: 4   LVLTIFANLFPAACTGAH-ERTFLAVKPDGVQRRLVGEIVRRFERKGFKLVALKLVQASE 62
           LVL  + + + A   G+  E+T   +KPD + +   GEI+    + GF +  LK++  S 
Sbjct: 37  LVLIDYGDQYTARQLGSRKEKTLALIKPDAISK--AGEIIEIINKAGFTITKLKMMMLSR 94

Query: 63  ELLREHYAELRERPFYGRLVKYMASGPVVAMVWQGLDVVRTSRALIGATNPADA---PPG 119
           +   + + + + RPF+  L++++ +GP++AM     D +   + L+G  N   A      
Sbjct: 95  KEALDFHVDHQSRPFFNELIQFITTGPIIAMEILRDDAICEWKRLLGPANSGVARTDASE 154

Query: 120 TIRGDFCIEVGKNLIHGSDSVESARREIALWF 151
           +IR  F  +  +N  HG DS  SA RE+ L+F
Sbjct: 155 SIRALFGTDGIRNAAHGPDSFASAAREMELFF 186



 Score = 51.2 bits (121), Expect = 4e-07
 Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 4/133 (3%)

Query: 24  TFLAVKPDGVQRRLVGEIVRRFERKGFKLVALKLVQASEELLREHYAELR-ERPFYGRLV 82
           T   VKP  V   L+G+I+      GF++ A+++       + E Y   +     Y  +V
Sbjct: 204 TCCIVKPHAVSEGLLGKILMAIRDAGFEISAMQMFNMDRVNVEEFYEVYKGVVTEYHDMV 263

Query: 83  KYMASGPVVAMVWQGLDVVRTSRALIGATNPADA---PPGTIRGDFCIEVGKNLIHGSDS 139
             M SGP VAM  Q  +  +T R   G  +P  A    PGT+R  F     +N +H +D 
Sbjct: 264 TEMYSGPCVAMEIQQNNATKTFREFCGPADPEIARHLRPGTLRAIFGKTKIQNAVHCTDL 323

Query: 140 VESARREIALWFR 152
            E    E+  +F+
Sbjct: 324 PEDGLLEVQYFFK 336


>gi|7019465 nucleoside diphosphate kinase 7 isoform a [Homo sapiens]
          Length = 376

 Score = 73.6 bits (179), Expect = 8e-14
 Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 6/152 (3%)

Query: 4   LVLTIFANLFPAACTGAH-ERTFLAVKPDGVQRRLVGEIVRRFERKGFKLVALKLVQASE 62
           LVL  + + + A   G+  E+T   +KPD + +   GEI+    + GF +  LK++  S 
Sbjct: 73  LVLIDYGDQYTARQLGSRKEKTLALIKPDAISK--AGEIIEIINKAGFTITKLKMMMLSR 130

Query: 63  ELLREHYAELRERPFYGRLVKYMASGPVVAMVWQGLDVVRTSRALIGATNPADA---PPG 119
           +   + + + + RPF+  L++++ +GP++AM     D +   + L+G  N   A      
Sbjct: 131 KEALDFHVDHQSRPFFNELIQFITTGPIIAMEILRDDAICEWKRLLGPANSGVARTDASE 190

Query: 120 TIRGDFCIEVGKNLIHGSDSVESARREIALWF 151
           +IR  F  +  +N  HG DS  SA RE+ L+F
Sbjct: 191 SIRALFGTDGIRNAAHGPDSFASAAREMELFF 222



 Score = 51.2 bits (121), Expect = 4e-07
 Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 4/133 (3%)

Query: 24  TFLAVKPDGVQRRLVGEIVRRFERKGFKLVALKLVQASEELLREHYAELR-ERPFYGRLV 82
           T   VKP  V   L+G+I+      GF++ A+++       + E Y   +     Y  +V
Sbjct: 240 TCCIVKPHAVSEGLLGKILMAIRDAGFEISAMQMFNMDRVNVEEFYEVYKGVVTEYHDMV 299

Query: 83  KYMASGPVVAMVWQGLDVVRTSRALIGATNPADA---PPGTIRGDFCIEVGKNLIHGSDS 139
             M SGP VAM  Q  +  +T R   G  +P  A    PGT+R  F     +N +H +D 
Sbjct: 300 TEMYSGPCVAMEIQQNNATKTFREFCGPADPEIARHLRPGTLRAIFGKTKIQNAVHCTDL 359

Query: 140 VESARREIALWFR 152
            E    E+  +F+
Sbjct: 360 PEDGLLEVQYFFK 372


>gi|4505413 non-metastatic cells 5, protein expressed in
           (nucleoside-diphosphate kinase) [Homo sapiens]
          Length = 212

 Score = 59.7 bits (143), Expect = 1e-09
 Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 5/133 (3%)

Query: 22  ERTFLAVKPDGVQRRLVGEIVRRFERKGFKLVALKLVQASEELLREHYAELRERPFYGRL 81
           E+T   +KPD V +    EI     R GF +V  + ++ S E     Y E   + F+  L
Sbjct: 13  EKTLAIIKPDIVDKE--EEIQDIILRSGFTIVQRRKLRLSPEQCSNFYVEKYGKMFFPNL 70

Query: 82  VKYMASGPVVAMVWQGLDVVRTSRALIGATN---PADAPPGTIRGDFCIEVGKNLIHGSD 138
             YM+SGP+VAM+      +     L+G  N     +  P ++R  +  +  +N +HGS+
Sbjct: 71  TAYMSSGPLVAMILARHKAISYWLELLGPNNSLVAKETHPDSLRAIYGTDDLRNALHGSN 130

Query: 139 SVESARREIALWF 151
              +A REI   F
Sbjct: 131 DFAAAEREIRFMF 143


>gi|30023828 thioredoxin domain containing 6 [Homo sapiens]
          Length = 263

 Score = 58.5 bits (140), Expect = 3e-09
 Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 7/135 (5%)

Query: 24  TFLAVKPDGVQRRLVGEIVRRFERKGFKLVALKLVQASEELLREHYAELRERPFYGRLVK 83
           T   +KPD V      EI+ + +  GF+++  +    +E  +R  Y        + +LV 
Sbjct: 100 TLAIIKPDAVAHGKTDEIIMKIQEAGFEILTNEERTMTEAEVRLFYQHKAGEEAFEKLVH 159

Query: 84  YMASGP---VVAMVWQGL-DVVRTSRALIGATNPADA---PPGTIRGDFCIEVGKNLIHG 136
           +M SGP   ++    +G  DVV T R ++G  +P  A    P ++R  +  E+  N +HG
Sbjct: 160 HMCSGPSHLLILTRTEGFEDVVTTWRTVMGPRDPNVARREQPESLRAQYGTEMPFNAVHG 219

Query: 137 SDSVESARREIALWF 151
           S   E A RE+AL F
Sbjct: 220 SRDREDADRELALLF 234


>gi|148839372 thioredoxin domain containing 3 [Homo sapiens]
          Length = 588

 Score = 54.7 bits (130), Expect = 4e-08
 Identities = 32/119 (26%), Positives = 61/119 (51%), Gaps = 3/119 (2%)

Query: 40  EIVRRFERKGFKLVALKLVQASEELLREHYAELRERPFYGRLVKYMASGPVVAMVWQGLD 99
           +I++  +  GF L  +K +  + E + + Y ++  + FY  L++ ++ GP + M+    +
Sbjct: 468 QILKIVKEAGFDLTQVKKMFLTPEQIEKIYPKVTGKDFYKDLLEMLSVGPSMVMILTKWN 527

Query: 100 VVRTSRALIGATNPADA---PPGTIRGDFCIEVGKNLIHGSDSVESARREIALWFRADE 155
            V   R L+G T+P +A    P +IR  F I   KN++HG+ +   A+  +   F   E
Sbjct: 528 AVAEWRRLMGPTDPEEAKLLSPDSIRAQFGISKLKNIVHGASNAYEAKEVVNRLFEDPE 586



 Score = 47.0 bits (110), Expect = 8e-06
 Identities = 34/134 (25%), Positives = 71/134 (52%), Gaps = 5/134 (3%)

Query: 22  ERTFLAVKPDGVQRRLVGEIVRRFERKGFKLVALKLVQASEELLREHYAELRERPFYGRL 81
           E+T   ++P+    R   +++R  + + FK++  + V  SE+  +    E     ++ +L
Sbjct: 316 EKTLALLRPNLFHERK-DDVLRIIKDEDFKILEQRQVVLSEKEAQALCKEYENEDYFNKL 374

Query: 82  VKYMASGPVVAMVWQGLDVVRTSRALIGATNPADAP---PGTIRGDFCIE-VGKNLIHGS 137
           ++ M SGP +A+V    + ++  + L+G     +A    P ++   F ++ +  N ++GS
Sbjct: 375 IENMTSGPSLALVLLRDNGLQYWKQLLGPRTVEEAIEYFPESLCAQFAMDSLPVNQLYGS 434

Query: 138 DSVESARREIALWF 151
           DS+E+A REI  +F
Sbjct: 435 DSLETAEREIQHFF 448



 Score = 33.9 bits (76), Expect = 0.068
 Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 2/83 (2%)

Query: 17  CTGAHERTFLAV-KPDGVQRRLVGEIVRRFERKGFKLVALKLVQASEELLREHYAELRER 75
           C    E   +A+ KPD V  + V EI R+  + GF + A      +EE +   Y+ + ++
Sbjct: 148 CESVQELYSIAIIKPDAVISKKVLEIKRKITKAGFIIEAEHKTVLTEEQVVNFYSRIADQ 207

Query: 76  PFYGRLVKYMASG-PVVAMVWQG 97
             +   V +M SG   + +V QG
Sbjct: 208 CDFEEFVSFMTSGLSYILVVSQG 230


>gi|57164951 non imprinted in Prader-Willi/Angelman syndrome 2
           isoform b [Homo sapiens]
          Length = 341

 Score = 28.5 bits (62), Expect = 2.9
 Identities = 16/43 (37%), Positives = 21/43 (48%)

Query: 113 PADAPPGTIRGDFCIEVGKNLIHGSDSVESARREIALWFRADE 155
           P D   GT+ G F I VG  L+H    V  +   + + FR DE
Sbjct: 256 PVDDVIGTLSGFFTIIVGIFLLHAFKDVSFSLASLPVSFRKDE 298


>gi|57013272 non imprinted in Prader-Willi/Angelman syndrome 2
           isoform a [Homo sapiens]
          Length = 360

 Score = 28.5 bits (62), Expect = 2.9
 Identities = 16/43 (37%), Positives = 21/43 (48%)

Query: 113 PADAPPGTIRGDFCIEVGKNLIHGSDSVESARREIALWFRADE 155
           P D   GT+ G F I VG  L+H    V  +   + + FR DE
Sbjct: 275 PVDDVIGTLSGFFTIIVGIFLLHAFKDVSFSLASLPVSFRKDE 317


>gi|57164953 non imprinted in Prader-Willi/Angelman syndrome 2
           isoform a [Homo sapiens]
          Length = 360

 Score = 28.5 bits (62), Expect = 2.9
 Identities = 16/43 (37%), Positives = 21/43 (48%)

Query: 113 PADAPPGTIRGDFCIEVGKNLIHGSDSVESARREIALWFRADE 155
           P D   GT+ G F I VG  L+H    V  +   + + FR DE
Sbjct: 275 PVDDVIGTLSGFFTIIVGIFLLHAFKDVSFSLASLPVSFRKDE 317


>gi|57013274 non imprinted in Prader-Willi/Angelman syndrome 2
           isoform a [Homo sapiens]
          Length = 360

 Score = 28.5 bits (62), Expect = 2.9
 Identities = 16/43 (37%), Positives = 21/43 (48%)

Query: 113 PADAPPGTIRGDFCIEVGKNLIHGSDSVESARREIALWFRADE 155
           P D   GT+ G F I VG  L+H    V  +   + + FR DE
Sbjct: 275 PVDDVIGTLSGFFTIIVGIFLLHAFKDVSFSLASLPVSFRKDE 317


>gi|223005922 leucine rich repeat containing 10-like [Homo sapiens]
          Length = 292

 Score = 27.3 bits (59), Expect = 6.4
 Identities = 15/34 (44%), Positives = 20/34 (58%)

Query: 39  GEIVRRFERKGFKLVALKLVQASEELLREHYAEL 72
           G  +RRF R   +LVAL+ +Q  +  LR   AEL
Sbjct: 122 GNFLRRFPRPLLRLVALQSLQMGDNRLRALPAEL 155


>gi|51702222 SPT2, Suppressor of Ty, domain containing 1 [Homo
           sapiens]
          Length = 685

 Score = 27.3 bits (59), Expect = 6.4
 Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 3/42 (7%)

Query: 40  EIVRRFERKGFKLVALKLVQASEELLREHYA-ELRERPFYGR 80
           +++R  E+K F+ V +K+V+ SEE  R   A ELRER F  R
Sbjct: 171 DLLRLAEKKQFEPVEIKVVKKSEE--RPMTAEELREREFLER 210


>gi|237512982 voltage-gated sodium channel type V alpha isoform f
           [Homo sapiens]
          Length = 1962

 Score = 26.9 bits (58), Expect = 8.4
 Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 15/80 (18%)

Query: 93  MVWQGLDVVR-----------TSRALIGATNPADAPPGTI-RGDFCIEVGKNLIHGSDSV 140
           +VW+ LD+             TS  L+   N +DA  GT   G  C++ G+N  HG  S 
Sbjct: 299 LVWESLDLYLSDPENYLLKNGTSDVLL-CGNSSDA--GTCPEGYRCLKAGENPDHGYTSF 355

Query: 141 ESARREIALWFRADELLCWE 160
           +S        FR     CWE
Sbjct: 356 DSFAWAFLALFRLMTQDCWE 375


>gi|237512980 voltage-gated sodium channel type V alpha isoform e
           [Homo sapiens]
          Length = 1983

 Score = 26.9 bits (58), Expect = 8.4
 Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 15/80 (18%)

Query: 93  MVWQGLDVVR-----------TSRALIGATNPADAPPGTI-RGDFCIEVGKNLIHGSDSV 140
           +VW+ LD+             TS  L+   N +DA  GT   G  C++ G+N  HG  S 
Sbjct: 299 LVWESLDLYLSDPENYLLKNGTSDVLL-CGNSSDA--GTCPEGYRCLKAGENPDHGYTSF 355

Query: 141 ESARREIALWFRADELLCWE 160
           +S        FR     CWE
Sbjct: 356 DSFAWAFLALFRLMTQDCWE 375


>gi|37622907 voltage-gated sodium channel type V alpha isoform a
           [Homo sapiens]
          Length = 2016

 Score = 26.9 bits (58), Expect = 8.4
 Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 15/80 (18%)

Query: 93  MVWQGLDVVR-----------TSRALIGATNPADAPPGTI-RGDFCIEVGKNLIHGSDSV 140
           +VW+ LD+             TS  L+   N +DA  GT   G  C++ G+N  HG  S 
Sbjct: 299 LVWESLDLYLSDPENYLLKNGTSDVLL-CGNSSDA--GTCPEGYRCLKAGENPDHGYTSF 355

Query: 141 ESARREIALWFRADELLCWE 160
           +S        FR     CWE
Sbjct: 356 DSFAWAFLALFRLMTQDCWE 375


>gi|30089970 voltage-gated sodium channel type V alpha isoform b
           [Homo sapiens]
          Length = 2015

 Score = 26.9 bits (58), Expect = 8.4
 Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 15/80 (18%)

Query: 93  MVWQGLDVVR-----------TSRALIGATNPADAPPGTI-RGDFCIEVGKNLIHGSDSV 140
           +VW+ LD+             TS  L+   N +DA  GT   G  C++ G+N  HG  S 
Sbjct: 299 LVWESLDLYLSDPENYLLKNGTSDVLL-CGNSSDA--GTCPEGYRCLKAGENPDHGYTSF 355

Query: 141 ESARREIALWFRADELLCWE 160
           +S        FR     CWE
Sbjct: 356 DSFAWAFLALFRLMTQDCWE 375


>gi|150417969 voltage-gated sodium channel type V alpha isoform d
           [Homo sapiens]
          Length = 1998

 Score = 26.9 bits (58), Expect = 8.4
 Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 15/80 (18%)

Query: 93  MVWQGLDVVR-----------TSRALIGATNPADAPPGTI-RGDFCIEVGKNLIHGSDSV 140
           +VW+ LD+             TS  L+   N +DA  GT   G  C++ G+N  HG  S 
Sbjct: 299 LVWESLDLYLSDPENYLLKNGTSDVLL-CGNSSDA--GTCPEGYRCLKAGENPDHGYTSF 355

Query: 141 ESARREIALWFRADELLCWE 160
           +S        FR     CWE
Sbjct: 356 DSFAWAFLALFRLMTQDCWE 375


>gi|150417967 voltage-gated sodium channel type V alpha isoform c
           [Homo sapiens]
          Length = 2016

 Score = 26.9 bits (58), Expect = 8.4
 Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 15/80 (18%)

Query: 93  MVWQGLDVVR-----------TSRALIGATNPADAPPGTI-RGDFCIEVGKNLIHGSDSV 140
           +VW+ LD+             TS  L+   N +DA  GT   G  C++ G+N  HG  S 
Sbjct: 299 LVWESLDLYLSDPENYLLKNGTSDVLL-CGNSSDA--GTCPEGYRCLKAGENPDHGYTSF 355

Query: 141 ESARREIALWFRADELLCWE 160
           +S        FR     CWE
Sbjct: 356 DSFAWAFLALFRLMTQDCWE 375


>gi|239748090 PREDICTED: similar to sodium channel, voltage-gated,
           type V, alpha (long QT syndrome 3) [Homo sapiens]
          Length = 1637

 Score = 26.9 bits (58), Expect = 8.4
 Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 15/80 (18%)

Query: 93  MVWQGLDVVR-----------TSRALIGATNPADAPPGTI-RGDFCIEVGKNLIHGSDSV 140
           +VW+ LD+             TS  L+   N +DA  GT   G  C++ G+N  HG  S 
Sbjct: 299 LVWESLDLYLSDPENYLLKNGTSDVLL-CGNSSDA--GTCPEGYRCLKAGENPDHGYTSF 355

Query: 141 ESARREIALWFRADELLCWE 160
           +S        FR     CWE
Sbjct: 356 DSFAWAFLALFRLMTQDCWE 375


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.325    0.140    0.437 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,272,232
Number of Sequences: 37866
Number of extensions: 235823
Number of successful extensions: 746
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 710
Number of HSP's gapped (non-prelim): 33
length of query: 169
length of database: 18,247,518
effective HSP length: 95
effective length of query: 74
effective length of database: 14,650,248
effective search space: 1084118352
effective search space used: 1084118352
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.