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Search of human proteins with 37675280
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|37675280 ajuba isoform 2 [Homo sapiens]
(121 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|37675280 ajuba isoform 2 [Homo sapiens] 281 1e-76
gi|14249622 ajuba isoform 1 [Homo sapiens] 281 1e-76
gi|7657307 LIM domains containing 1 [Homo sapiens] 196 3e-51
gi|122937269 Wilms tumor 1 interacting protein [Homo sapiens] 192 7e-50
gi|91208423 thyroid receptor-interacting protein 6 [Homo sapiens] 150 2e-37
gi|5031887 LIM domain containing preferred translocation partner... 148 1e-36
gi|58530845 zyxin [Homo sapiens] 141 1e-34
gi|4508047 zyxin [Homo sapiens] 141 1e-34
gi|66932988 filamin-binding LIM protein-1 isoform c [Homo sapiens] 114 1e-26
gi|66932982 filamin-binding LIM protein-1 isoform a [Homo sapiens] 114 1e-26
gi|228480213 four and a half LIM domains 1 isoform 2 [Homo sapiens] 57 4e-09
gi|228480207 four and a half LIM domains 1 isoform 2 [Homo sapiens] 57 4e-09
gi|228480209 four and a half LIM domains 1 isoform 3 [Homo sapiens] 57 4e-09
gi|228480205 four and a half LIM domains 1 isoform 5 [Homo sapiens] 57 4e-09
gi|21361122 four and a half LIM domains 1 isoform 2 [Homo sapiens] 57 4e-09
gi|221316659 leupaxin isoform 1 [Homo sapiens] 55 1e-08
gi|4758670 leupaxin isoform 2 [Homo sapiens] 55 1e-08
gi|238859658 LIM and senescent cell antigen-like domains 2 isofo... 55 2e-08
gi|238776788 LIM and senescent cell antigen-like domains 2 isofo... 55 2e-08
gi|238776786 LIM and senescent cell antigen-like domains 2 isofo... 55 2e-08
gi|40804748 LIM and senescent cell antigen-like domains 2 isofor... 55 2e-08
gi|87159836 four and a half LIM domains 2 [Homo sapiens] 54 3e-08
gi|87159834 four and a half LIM domains 2 [Homo sapiens] 54 3e-08
gi|42403575 four and a half LIM domains 2 [Homo sapiens] 54 3e-08
gi|87159832 four and a half LIM domains 2 [Homo sapiens] 54 3e-08
gi|170932518 paxillin isoform 3 [Homo sapiens] 54 4e-08
gi|170932516 paxillin isoform 2 [Homo sapiens] 54 4e-08
gi|170932514 paxillin isoform 1 [Homo sapiens] 54 4e-08
gi|239741720 PREDICTED: hypothetical protein XP_002342298 [Homo ... 54 4e-08
gi|13518026 LIM and senescent cell antigen-like domains 1 [Homo ... 54 4e-08
>gi|37675280 ajuba isoform 2 [Homo sapiens]
Length = 121
Score = 281 bits (718), Expect = 1e-76
Identities = 121/121 (100%), Positives = 121/121 (100%)
Query: 1 MGKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCE 60
MGKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCE
Sbjct: 1 MGKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCE 60
Query: 61 DIVRVISMDRDYHFECYHCEDCRMQLSDEEGCCCFPLDGHLLCHGCHMQRLNARQPPANY 120
DIVRVISMDRDYHFECYHCEDCRMQLSDEEGCCCFPLDGHLLCHGCHMQRLNARQPPANY
Sbjct: 61 DIVRVISMDRDYHFECYHCEDCRMQLSDEEGCCCFPLDGHLLCHGCHMQRLNARQPPANY 120
Query: 121 I 121
I
Sbjct: 121 I 121
>gi|14249622 ajuba isoform 1 [Homo sapiens]
Length = 538
Score = 281 bits (718), Expect = 1e-76
Identities = 121/121 (100%), Positives = 121/121 (100%)
Query: 1 MGKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCE 60
MGKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCE
Sbjct: 418 MGKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCE 477
Query: 61 DIVRVISMDRDYHFECYHCEDCRMQLSDEEGCCCFPLDGHLLCHGCHMQRLNARQPPANY 120
DIVRVISMDRDYHFECYHCEDCRMQLSDEEGCCCFPLDGHLLCHGCHMQRLNARQPPANY
Sbjct: 478 DIVRVISMDRDYHFECYHCEDCRMQLSDEEGCCCFPLDGHLLCHGCHMQRLNARQPPANY 537
Query: 121 I 121
I
Sbjct: 538 I 538
>gi|7657307 LIM domains containing 1 [Homo sapiens]
Length = 676
Score = 196 bits (499), Expect = 3e-51
Identities = 77/114 (67%), Positives = 96/114 (84%)
Query: 1 MGKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCE 60
+GKSYHPGCFRC++CN+CLDG+PFTVD N++YCV DYHK APKCAACG PILP EG +
Sbjct: 552 LGKSYHPGCFRCVICNECLDGVPFTVDSENKIYCVRDYHKVLAPKCAACGLPILPPEGSD 611
Query: 61 DIVRVISMDRDYHFECYHCEDCRMQLSDEEGCCCFPLDGHLLCHGCHMQRLNAR 114
+ +RV+SMDRDYH ECYHCEDC ++L+DE+G C+PL+ HL CH CH++RL R
Sbjct: 612 ETIRVVSMDRDYHVECYHCEDCGLELNDEDGHRCYPLEDHLFCHSCHVKRLEKR 665
>gi|122937269 Wilms tumor 1 interacting protein [Homo sapiens]
Length = 430
Score = 192 bits (487), Expect = 7e-50
Identities = 78/118 (66%), Positives = 94/118 (79%)
Query: 1 MGKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCE 60
+GKSYHPGCFRC VCN+CLDG+PFTVD N +YCV DYH +APKCA+C +PILP++GCE
Sbjct: 305 LGKSYHPGCFRCSVCNECLDGVPFTVDVENNIYCVRDYHTVFAPKCASCARPILPAQGCE 364
Query: 61 DIVRVISMDRDYHFECYHCEDCRMQLSDEEGCCCFPLDGHLLCHGCHMQRLNARQPPA 118
+RV+SMDRDYH CYHCEDC +QLS EEG C+PL GHLLC CH++RL P+
Sbjct: 365 TTIRVVSMDRDYHVACYHCEDCGLQLSGEEGRRCYPLAGHLLCRRCHLRRLQPGPLPS 422
>gi|91208423 thyroid receptor-interacting protein 6 [Homo sapiens]
Length = 476
Score = 150 bits (379), Expect = 2e-37
Identities = 58/112 (51%), Positives = 84/112 (75%), Gaps = 1/112 (0%)
Query: 1 MGKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCE 60
MGK+YHPGCF C+VC++ LDGIPFTVD ++Q++C+ D+H+ +AP+C+ CG I+P G E
Sbjct: 354 MGKAYHPGCFTCVVCHRGLDGIPFTVDATSQIHCIEDFHRKFAPRCSVCGGAIMPEPGQE 413
Query: 61 DIVRVISMDRDYHFECYHCEDCRMQLSDEEGC-CCFPLDGHLLCHGCHMQRL 111
+ VR++++DR +H CY CE+C + LS E C C+PLDGH+LC C R+
Sbjct: 414 ETVRIVALDRSFHIGCYKCEECGLLLSSEGECQGCYPLDGHILCKACSAWRI 465
Score = 42.7 bits (99), Expect = 6e-05
Identities = 29/86 (33%), Positives = 38/86 (44%), Gaps = 9/86 (10%)
Query: 1 MGKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCE 60
+ + +H GCF C C L G F + YC Y KCA C QPIL +
Sbjct: 296 LDRVFHVGCFVCSTCRAQLRGQHFYA-VERRAYCEGCYVAT-LEKCATCSQPIL-----D 348
Query: 61 DIVRVISMDRDYHFECYHCEDCRMQL 86
I+R +M + YH C+ C C L
Sbjct: 349 RILR--AMGKAYHPGCFTCVVCHRGL 372
Score = 40.8 bits (94), Expect = 2e-04
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 8/70 (11%)
Query: 42 YAPKCAACGQPILPSEGCEDIVRVISMDRDYHFECYHCEDCRMQLSDEEGCCCFPLDGHL 101
Y +C CG+ ++ D V+++DR +H C+ C CR QL G + ++
Sbjct: 275 YFGQCGGCGEDVVG-----DGAGVVALDRVFHVGCFVCSTCRAQL---RGQHFYAVERRA 326
Query: 102 LCHGCHMQRL 111
C GC++ L
Sbjct: 327 YCEGCYVATL 336
>gi|5031887 LIM domain containing preferred translocation partner in
lipoma [Homo sapiens]
Length = 612
Score = 148 bits (373), Expect = 1e-36
Identities = 55/110 (50%), Positives = 82/110 (74%)
Query: 2 GKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCED 61
GK+YHP CF C++C++ LDGIPFTVD ++C+ D+HK +AP+C+ C +PI+P+ G E+
Sbjct: 492 GKAYHPHCFTCVMCHRSLDGIPFTVDAGGLIHCIEDFHKKFAPRCSVCKEPIMPAPGQEE 551
Query: 62 IVRVISMDRDYHFECYHCEDCRMQLSDEEGCCCFPLDGHLLCHGCHMQRL 111
VR++++DRD+H CY CEDC LS+ + C+PLDGH+LC C+ R+
Sbjct: 552 TVRIVALDRDFHVHCYRCEDCGGLLSEGDNQGCYPLDGHILCKTCNSARI 601
Score = 32.3 bits (72), Expect = 0.087
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 10/71 (14%)
Query: 42 YAPKCAACGQPIL-PSEGCEDIVRVISMDRDYHFECYHCEDCRMQLSDEEGCCCFPLDGH 100
Y +CA CG+ ++ GC +MD+ +H +C+ C C +L G + ++
Sbjct: 412 YFGRCARCGENVVGEGTGCT------AMDQVFHVDCFTCIICNNKL---RGQPFYAVEKK 462
Query: 101 LLCHGCHMQRL 111
C C++ L
Sbjct: 463 AYCEPCYINTL 473
>gi|58530845 zyxin [Homo sapiens]
Length = 572
Score = 141 bits (355), Expect = 1e-34
Identities = 58/112 (51%), Positives = 80/112 (71%), Gaps = 5/112 (4%)
Query: 2 GKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCED 61
GK+YHP CF C+VC + L+G F VD +N+ +CV DYHK YAP+C+ C +PI+P G ++
Sbjct: 460 GKAYHPHCFTCVVCARPLEGTSFIVDQANRPHCVPDYHKQYAPRCSVCSEPIMPEPGRDE 519
Query: 62 IVRVISMDRDYHFECYHCEDCRMQLS---DEEGCCCFPLDGHLLCHGCHMQR 110
VRV+++D+++H +CY CEDC LS D+ G CFPLDGH+LC CH R
Sbjct: 520 TVRVVALDKNFHMKCYKCEDCGKPLSIEADDNG--CFPLDGHVLCRKCHTAR 569
Score = 35.4 bits (80), Expect = 0.010
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 46 CAACGQPILPSEGCEDIVRVISMDRDYHFECYHCEDCRMQLSDEEGCCCFPLDGHLLCHG 105
C C QP+ ++ V ++ + +H C+ C C QL ++ + L+G C G
Sbjct: 384 CGRCHQPLARAQPA-----VRALGQLFHIACFTCHQCAQQLQGQQ---FYSLEGAPYCEG 435
Query: 106 CHMQRL 111
C+ L
Sbjct: 436 CYTDTL 441
>gi|4508047 zyxin [Homo sapiens]
Length = 572
Score = 141 bits (355), Expect = 1e-34
Identities = 58/112 (51%), Positives = 80/112 (71%), Gaps = 5/112 (4%)
Query: 2 GKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCED 61
GK+YHP CF C+VC + L+G F VD +N+ +CV DYHK YAP+C+ C +PI+P G ++
Sbjct: 460 GKAYHPHCFTCVVCARPLEGTSFIVDQANRPHCVPDYHKQYAPRCSVCSEPIMPEPGRDE 519
Query: 62 IVRVISMDRDYHFECYHCEDCRMQLS---DEEGCCCFPLDGHLLCHGCHMQR 110
VRV+++D+++H +CY CEDC LS D+ G CFPLDGH+LC CH R
Sbjct: 520 TVRVVALDKNFHMKCYKCEDCGKPLSIEADDNG--CFPLDGHVLCRKCHTAR 569
Score = 35.4 bits (80), Expect = 0.010
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 46 CAACGQPILPSEGCEDIVRVISMDRDYHFECYHCEDCRMQLSDEEGCCCFPLDGHLLCHG 105
C C QP+ ++ V ++ + +H C+ C C QL ++ + L+G C G
Sbjct: 384 CGRCHQPLARAQPA-----VRALGQLFHIACFTCHQCAQQLQGQQ---FYSLEGAPYCEG 435
Query: 106 CHMQRL 111
C+ L
Sbjct: 436 CYTDTL 441
>gi|66932988 filamin-binding LIM protein-1 isoform c [Homo sapiens]
Length = 276
Score = 114 bits (286), Expect = 1e-26
Identities = 46/113 (40%), Positives = 74/113 (65%), Gaps = 6/113 (5%)
Query: 1 MGKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCE 60
+G+++HP CF C+ C +C+ F + N+VYC+ D+++ +AP C+ C PI+P +G +
Sbjct: 161 LGQAFHPSCFTCVTCARCIGDESFALGSQNEVYCLDDFYRKFAPVCSICENPIIPRDG-K 219
Query: 61 DIVRVISMDRDYHFECYHCEDCRMQLSDE---EGCCCFPLDGHLLCHGCHMQR 110
D ++ M R++H CY CEDCR+ LS E +G C+PL+ HL C CH++R
Sbjct: 220 DAFKIECMGRNFHENCYRCEDCRILLSVEPTDQG--CYPLNNHLFCKPCHVKR 270
Score = 43.5 bits (101), Expect = 4e-05
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 46 CAACGQPILPSEGCEDIVRVISMDRDYHFECYHCEDCRMQLSDEEGCCCFPLDGHLLCHG 105
CA C + + P E + V +M R YH +C+ C CR QL+ G + DG LC
Sbjct: 86 CAFCHKTVSPRE-----LAVEAMKRQYHAQCFTCRTCRRQLA---GQSFYQKDGRPLCEP 137
Query: 106 CHMQRL 111
C+ L
Sbjct: 138 CYQDTL 143
Score = 43.5 bits (101), Expect = 4e-05
Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 17/93 (18%)
Query: 1 MGKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEG-C 59
M + YH CF C C + L G F Y K+ P C C Q L G C
Sbjct: 103 MKRQYHAQCFTCRTCRRQLAGQSF-------------YQKDGRPLCEPCYQDTLERCGKC 149
Query: 60 EDIVR---VISMDRDYHFECYHCEDCRMQLSDE 89
++VR + ++ + +H C+ C C + DE
Sbjct: 150 GEVVRDHIIRALGQAFHPSCFTCVTCARCIGDE 182
>gi|66932982 filamin-binding LIM protein-1 isoform a [Homo sapiens]
Length = 373
Score = 114 bits (286), Expect = 1e-26
Identities = 46/113 (40%), Positives = 74/113 (65%), Gaps = 6/113 (5%)
Query: 1 MGKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCE 60
+G+++HP CF C+ C +C+ F + N+VYC+ D+++ +AP C+ C PI+P +G +
Sbjct: 258 LGQAFHPSCFTCVTCARCIGDESFALGSQNEVYCLDDFYRKFAPVCSICENPIIPRDG-K 316
Query: 61 DIVRVISMDRDYHFECYHCEDCRMQLSDE---EGCCCFPLDGHLLCHGCHMQR 110
D ++ M R++H CY CEDCR+ LS E +G C+PL+ HL C CH++R
Sbjct: 317 DAFKIECMGRNFHENCYRCEDCRILLSVEPTDQG--CYPLNNHLFCKPCHVKR 367
Score = 43.5 bits (101), Expect = 4e-05
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 46 CAACGQPILPSEGCEDIVRVISMDRDYHFECYHCEDCRMQLSDEEGCCCFPLDGHLLCHG 105
CA C + + P E + V +M R YH +C+ C CR QL+ G + DG LC
Sbjct: 183 CAFCHKTVSPRE-----LAVEAMKRQYHAQCFTCRTCRRQLA---GQSFYQKDGRPLCEP 234
Query: 106 CHMQRL 111
C+ L
Sbjct: 235 CYQDTL 240
Score = 43.5 bits (101), Expect = 4e-05
Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 17/93 (18%)
Query: 1 MGKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEG-C 59
M + YH CF C C + L G F Y K+ P C C Q L G C
Sbjct: 200 MKRQYHAQCFTCRTCRRQLAGQSF-------------YQKDGRPLCEPCYQDTLERCGKC 246
Query: 60 EDIVR---VISMDRDYHFECYHCEDCRMQLSDE 89
++VR + ++ + +H C+ C C + DE
Sbjct: 247 GEVVRDHIIRALGQAFHPSCFTCVTCARCIGDE 279
>gi|228480213 four and a half LIM domains 1 isoform 2 [Homo sapiens]
Length = 280
Score = 56.6 bits (135), Expect = 4e-09
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 5 YHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCEDIVR 64
+H CF C+ C+K L G FT +Q YCV Y A KCA C PI +V
Sbjct: 181 WHADCFVCVTCSKKLAGQRFTA-VEDQYYCVDCYKNFVAKKCAGCKNPITGFGKGSSVVA 239
Query: 65 VISMDRDYHFECYHCEDCRMQLSDE 89
+ +H C+HC+ C + L+++
Sbjct: 240 Y--EGQSWHDYCFHCKKCSVNLANK 262
Score = 39.3 bits (90), Expect = 7e-04
Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 9/103 (8%)
Query: 5 YHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCEDIVR 64
+H CFRC C L F V N++ C + +PKC C + I+ + +
Sbjct: 61 WHDTCFRCAKCLHPLANETF-VAKDNKILCNKCTTREDSPKCKGCFKAIVAGDQNVEYKG 119
Query: 65 VISMDRDYHFECYHCEDCRMQLSDEEGCCCFPLDGHLLCHGCH 107
+ +H +C+ C +C+ + FP C CH
Sbjct: 120 TV-----WHKDCFTCSNCKQVIGTGS---FFPKGEDFYCVTCH 154
Score = 26.6 bits (57), Expect = 4.8
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 2 GKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYC 34
G+S+H CF C C+ L F V QVYC
Sbjct: 242 GQSWHDYCFHCKKCSVNLANKRF-VFHQEQVYC 273
>gi|228480207 four and a half LIM domains 1 isoform 2 [Homo sapiens]
Length = 280
Score = 56.6 bits (135), Expect = 4e-09
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 5 YHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCEDIVR 64
+H CF C+ C+K L G FT +Q YCV Y A KCA C PI +V
Sbjct: 181 WHADCFVCVTCSKKLAGQRFTA-VEDQYYCVDCYKNFVAKKCAGCKNPITGFGKGSSVVA 239
Query: 65 VISMDRDYHFECYHCEDCRMQLSDE 89
+ +H C+HC+ C + L+++
Sbjct: 240 Y--EGQSWHDYCFHCKKCSVNLANK 262
Score = 39.3 bits (90), Expect = 7e-04
Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 9/103 (8%)
Query: 5 YHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCEDIVR 64
+H CFRC C L F V N++ C + +PKC C + I+ + +
Sbjct: 61 WHDTCFRCAKCLHPLANETF-VAKDNKILCNKCTTREDSPKCKGCFKAIVAGDQNVEYKG 119
Query: 65 VISMDRDYHFECYHCEDCRMQLSDEEGCCCFPLDGHLLCHGCH 107
+ +H +C+ C +C+ + FP C CH
Sbjct: 120 TV-----WHKDCFTCSNCKQVIGTGS---FFPKGEDFYCVTCH 154
Score = 26.6 bits (57), Expect = 4.8
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 2 GKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYC 34
G+S+H CF C C+ L F V QVYC
Sbjct: 242 GQSWHDYCFHCKKCSVNLANKRF-VFHQEQVYC 273
>gi|228480209 four and a half LIM domains 1 isoform 3 [Homo sapiens]
Length = 309
Score = 56.6 bits (135), Expect = 4e-09
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 5 YHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCEDIVR 64
+H CF C+ C+K L G FT +Q YCV Y A KCA C PI +V
Sbjct: 210 WHADCFVCVTCSKKLAGQRFTA-VEDQYYCVDCYKNFVAKKCAGCKNPITGFGKGSSVVA 268
Query: 65 VISMDRDYHFECYHCEDCRMQLSDE 89
+ +H C+HC+ C + L+++
Sbjct: 269 Y--EGQSWHDYCFHCKKCSVNLANK 291
Score = 39.3 bits (90), Expect = 7e-04
Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 9/103 (8%)
Query: 5 YHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCEDIVR 64
+H CFRC C L F V N++ C + +PKC C + I+ + +
Sbjct: 90 WHDTCFRCAKCLHPLANETF-VAKDNKILCNKCTTREDSPKCKGCFKAIVAGDQNVEYKG 148
Query: 65 VISMDRDYHFECYHCEDCRMQLSDEEGCCCFPLDGHLLCHGCH 107
+ +H +C+ C +C+ + FP C CH
Sbjct: 149 TV-----WHKDCFTCSNCKQVIGTGS---FFPKGEDFYCVTCH 183
Score = 26.6 bits (57), Expect = 4.8
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 2 GKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYC 34
G+S+H CF C C+ L F V QVYC
Sbjct: 271 GQSWHDYCFHCKKCSVNLANKRF-VFHQEQVYC 302
>gi|228480205 four and a half LIM domains 1 isoform 5 [Homo sapiens]
Length = 296
Score = 56.6 bits (135), Expect = 4e-09
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 5 YHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCEDIVR 64
+H CF C+ C+K L G FT +Q YCV Y A KCA C PI +V
Sbjct: 197 WHADCFVCVTCSKKLAGQRFTA-VEDQYYCVDCYKNFVAKKCAGCKNPITGFGKGSSVVA 255
Query: 65 VISMDRDYHFECYHCEDCRMQLSDE 89
+ +H C+HC+ C + L+++
Sbjct: 256 Y--EGQSWHDYCFHCKKCSVNLANK 278
Score = 39.3 bits (90), Expect = 7e-04
Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 9/103 (8%)
Query: 5 YHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCEDIVR 64
+H CFRC C L F V N++ C + +PKC C + I+ + +
Sbjct: 77 WHDTCFRCAKCLHPLANETF-VAKDNKILCNKCTTREDSPKCKGCFKAIVAGDQNVEYKG 135
Query: 65 VISMDRDYHFECYHCEDCRMQLSDEEGCCCFPLDGHLLCHGCH 107
+ +H +C+ C +C+ + FP C CH
Sbjct: 136 TV-----WHKDCFTCSNCKQVIGTGS---FFPKGEDFYCVTCH 170
Score = 26.6 bits (57), Expect = 4.8
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 2 GKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYC 34
G+S+H CF C C+ L F V QVYC
Sbjct: 258 GQSWHDYCFHCKKCSVNLANKRF-VFHQEQVYC 289
>gi|21361122 four and a half LIM domains 1 isoform 2 [Homo sapiens]
Length = 280
Score = 56.6 bits (135), Expect = 4e-09
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 5 YHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCEDIVR 64
+H CF C+ C+K L G FT +Q YCV Y A KCA C PI +V
Sbjct: 181 WHADCFVCVTCSKKLAGQRFTA-VEDQYYCVDCYKNFVAKKCAGCKNPITGFGKGSSVVA 239
Query: 65 VISMDRDYHFECYHCEDCRMQLSDE 89
+ +H C+HC+ C + L+++
Sbjct: 240 Y--EGQSWHDYCFHCKKCSVNLANK 262
Score = 39.3 bits (90), Expect = 7e-04
Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 9/103 (8%)
Query: 5 YHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCEDIVR 64
+H CFRC C L F V N++ C + +PKC C + I+ + +
Sbjct: 61 WHDTCFRCAKCLHPLANETF-VAKDNKILCNKCTTREDSPKCKGCFKAIVAGDQNVEYKG 119
Query: 65 VISMDRDYHFECYHCEDCRMQLSDEEGCCCFPLDGHLLCHGCH 107
+ +H +C+ C +C+ + FP C CH
Sbjct: 120 TV-----WHKDCFTCSNCKQVIGTGS---FFPKGEDFYCVTCH 154
Score = 26.6 bits (57), Expect = 4.8
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 2 GKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYC 34
G+S+H CF C C+ L F V QVYC
Sbjct: 242 GQSWHDYCFHCKKCSVNLANKRF-VFHQEQVYC 273
>gi|221316659 leupaxin isoform 1 [Homo sapiens]
Length = 391
Score = 55.5 bits (132), Expect = 1e-08
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Query: 1 MGKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCE 60
+G+S+HP F C C + + PF + S YC DYH+ ++P+CA C PIL
Sbjct: 172 LGQSWHPEHFVCTHCKEEIGSSPF-FERSGLAYCPNDYHQLFSPRCAYCAAPILDKV--- 227
Query: 61 DIVRVISMDRDYHFECYHCEDC 82
+ +M++ +H E + C C
Sbjct: 228 ----LTAMNQTWHPEHFFCSHC 245
Score = 53.1 bits (126), Expect = 5e-08
Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 23/118 (19%)
Query: 1 MGKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCE 60
M +++HP F C C + F + + YC D+ ++PKC C +P+L +
Sbjct: 231 MNQTWHPEHFFCSHCGEVFGAEGFH-EKDKKPYCRKDFLAMFSPKCGGCNRPVLEN---- 285
Query: 61 DIVRVISMDRDYHFECYHCEDCRMQLSDEEGCCCFPLDGH------------LLCHGC 106
+ +MD +H EC+ C DC S F LDG LCHGC
Sbjct: 286 ---YLSAMDTVWHPECFVCGDCFTSFSTGS---FFELDGRPFCELHYHHRRGTLCHGC 337
Score = 38.9 bits (89), Expect = 0.001
Identities = 26/87 (29%), Positives = 35/87 (40%), Gaps = 8/87 (9%)
Query: 1 MGKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCE 60
M +HP CF C C F + + +C YH C CGQPI + C
Sbjct: 290 MDTVWHPECFVCGDCFTSFSTGSF-FELDGRPFCELHYHHRRGTLCHGCGQPI--TGRC- 345
Query: 61 DIVRVISMDRDYHFECYHCEDCRMQLS 87
+ +M +H E + C C QLS
Sbjct: 346 ----ISAMGYKFHPEHFVCAFCLTQLS 368
>gi|4758670 leupaxin isoform 2 [Homo sapiens]
Length = 386
Score = 55.5 bits (132), Expect = 1e-08
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Query: 1 MGKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCE 60
+G+S+HP F C C + + PF + S YC DYH+ ++P+CA C PIL
Sbjct: 167 LGQSWHPEHFVCTHCKEEIGSSPF-FERSGLAYCPNDYHQLFSPRCAYCAAPILDKV--- 222
Query: 61 DIVRVISMDRDYHFECYHCEDC 82
+ +M++ +H E + C C
Sbjct: 223 ----LTAMNQTWHPEHFFCSHC 240
Score = 53.1 bits (126), Expect = 5e-08
Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 23/118 (19%)
Query: 1 MGKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCE 60
M +++HP F C C + F + + YC D+ ++PKC C +P+L +
Sbjct: 226 MNQTWHPEHFFCSHCGEVFGAEGFH-EKDKKPYCRKDFLAMFSPKCGGCNRPVLEN---- 280
Query: 61 DIVRVISMDRDYHFECYHCEDCRMQLSDEEGCCCFPLDGH------------LLCHGC 106
+ +MD +H EC+ C DC S F LDG LCHGC
Sbjct: 281 ---YLSAMDTVWHPECFVCGDCFTSFSTGS---FFELDGRPFCELHYHHRRGTLCHGC 332
Score = 38.9 bits (89), Expect = 0.001
Identities = 26/87 (29%), Positives = 35/87 (40%), Gaps = 8/87 (9%)
Query: 1 MGKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCE 60
M +HP CF C C F + + +C YH C CGQPI + C
Sbjct: 285 MDTVWHPECFVCGDCFTSFSTGSF-FELDGRPFCELHYHHRRGTLCHGCGQPI--TGRC- 340
Query: 61 DIVRVISMDRDYHFECYHCEDCRMQLS 87
+ +M +H E + C C QLS
Sbjct: 341 ----ISAMGYKFHPEHFVCAFCLTQLS 363
>gi|238859658 LIM and senescent cell antigen-like domains 2 isoform
1 [Homo sapiens]
Length = 363
Score = 54.7 bits (130), Expect = 2e-08
Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 17/109 (15%)
Query: 2 GKSYHPGCFRCIVCNKCLDGIP--FTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGC 59
G+ YH CF VC +C P +F + YC D+ +AP C +CG+ I
Sbjct: 55 GELYHEHCF---VCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAPCCGSCGEFI------ 105
Query: 60 EDIVRVI-SMDRDYHFECYHCEDCRMQLSDEEGCCCFPLDGHLLCHGCH 107
I RVI +M+ ++H C+ CE C ++L+D G LC CH
Sbjct: 106 --IGRVIKAMNNNWHPGCFRCELCDVELAD---LGFVKNAGRHLCRPCH 149
Score = 39.7 bits (91), Expect = 5e-04
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 11/80 (13%)
Query: 4 SYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCEDIV 63
+YHP F C C K L + ++YC+ + K P C AC +PI EG
Sbjct: 180 AYHPDHFNCTHCGKELTAE--ARELKGELYCLPCHDKMGVPICGACRRPI---EG----- 229
Query: 64 RVI-SMDRDYHFECYHCEDC 82
RV+ ++ + +H E + C C
Sbjct: 230 RVVNALGKQWHVEHFVCAKC 249
Score = 37.0 bits (84), Expect = 0.004
Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 17/112 (15%)
Query: 1 MGKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPK-----CAACGQPILP 55
M ++HPGCFRC +C+ L + F V + + C +++ A C C I
Sbjct: 113 MNNNWHPGCFRCELCDVELADLGF-VKNAGRHLCRPCHNREKAKGLGKYICQRCHLVI-- 169
Query: 56 SEGCEDIVRVISMDRDYHFECYHCEDCRMQLSDEEGCCCFPLDGHLLCHGCH 107
D ++ YH + ++C C +L+ E L G L C CH
Sbjct: 170 -----DEQPLMFRSDAYHPDHFNCTHCGKELTAE----ARELKGELYCLPCH 212
Score = 33.1 bits (74), Expect = 0.051
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 8/87 (9%)
Query: 1 MGKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCE 60
+GK +H F C C K G + YC T Y++ + C C I EG
Sbjct: 235 LGKQWHVEHFVCAKCEKPFLGHRH-YEKKGLAYCETHYNQLFGDVCYNCSHVI---EG-- 288
Query: 61 DIVRVISMDRDYHFECYHCEDCRMQLS 87
D+V ++++ + C+ C C +L+
Sbjct: 289 DVVS--ALNKAWCVSCFSCSTCNSKLT 313
>gi|238776788 LIM and senescent cell antigen-like domains 2 isoform
5 [Homo sapiens]
Length = 336
Score = 54.7 bits (130), Expect = 2e-08
Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 17/109 (15%)
Query: 2 GKSYHPGCFRCIVCNKCLDGIP--FTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGC 59
G+ YH CF VC +C P +F + YC D+ +AP C +CG+ I
Sbjct: 28 GELYHEHCF---VCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAPCCGSCGEFI------ 78
Query: 60 EDIVRVI-SMDRDYHFECYHCEDCRMQLSDEEGCCCFPLDGHLLCHGCH 107
I RVI +M+ ++H C+ CE C ++L+D G LC CH
Sbjct: 79 --IGRVIKAMNNNWHPGCFRCELCDVELAD---LGFVKNAGRHLCRPCH 122
Score = 39.7 bits (91), Expect = 5e-04
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 11/80 (13%)
Query: 4 SYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCEDIV 63
+YHP F C C K L + ++YC+ + K P C AC +PI EG
Sbjct: 153 AYHPDHFNCTHCGKELTAE--ARELKGELYCLPCHDKMGVPICGACRRPI---EG----- 202
Query: 64 RVI-SMDRDYHFECYHCEDC 82
RV+ ++ + +H E + C C
Sbjct: 203 RVVNALGKQWHVEHFVCAKC 222
Score = 37.0 bits (84), Expect = 0.004
Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 17/112 (15%)
Query: 1 MGKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPK-----CAACGQPILP 55
M ++HPGCFRC +C+ L + F V + + C +++ A C C I
Sbjct: 86 MNNNWHPGCFRCELCDVELADLGF-VKNAGRHLCRPCHNREKAKGLGKYICQRCHLVI-- 142
Query: 56 SEGCEDIVRVISMDRDYHFECYHCEDCRMQLSDEEGCCCFPLDGHLLCHGCH 107
D ++ YH + ++C C +L+ E L G L C CH
Sbjct: 143 -----DEQPLMFRSDAYHPDHFNCTHCGKELTAE----ARELKGELYCLPCH 185
Score = 33.1 bits (74), Expect = 0.051
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 8/87 (9%)
Query: 1 MGKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCE 60
+GK +H F C C K G + YC T Y++ + C C I EG
Sbjct: 208 LGKQWHVEHFVCAKCEKPFLGHRH-YEKKGLAYCETHYNQLFGDVCYNCSHVI---EG-- 261
Query: 61 DIVRVISMDRDYHFECYHCEDCRMQLS 87
D+V ++++ + C+ C C +L+
Sbjct: 262 DVVS--ALNKAWCVSCFSCSTCNSKLT 286
>gi|238776786 LIM and senescent cell antigen-like domains 2 isoform
3 [Homo sapiens]
Length = 341
Score = 54.7 bits (130), Expect = 2e-08
Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 17/109 (15%)
Query: 2 GKSYHPGCFRCIVCNKCLDGIP--FTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGC 59
G+ YH CF VC +C P +F + YC D+ +AP C +CG+ I
Sbjct: 33 GELYHEHCF---VCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAPCCGSCGEFI------ 83
Query: 60 EDIVRVI-SMDRDYHFECYHCEDCRMQLSDEEGCCCFPLDGHLLCHGCH 107
I RVI +M+ ++H C+ CE C ++L+D G LC CH
Sbjct: 84 --IGRVIKAMNNNWHPGCFRCELCDVELAD---LGFVKNAGRHLCRPCH 127
Score = 39.7 bits (91), Expect = 5e-04
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 11/80 (13%)
Query: 4 SYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCEDIV 63
+YHP F C C K L + ++YC+ + K P C AC +PI EG
Sbjct: 158 AYHPDHFNCTHCGKELTAE--ARELKGELYCLPCHDKMGVPICGACRRPI---EG----- 207
Query: 64 RVI-SMDRDYHFECYHCEDC 82
RV+ ++ + +H E + C C
Sbjct: 208 RVVNALGKQWHVEHFVCAKC 227
Score = 37.0 bits (84), Expect = 0.004
Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 17/112 (15%)
Query: 1 MGKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPK-----CAACGQPILP 55
M ++HPGCFRC +C+ L + F V + + C +++ A C C I
Sbjct: 91 MNNNWHPGCFRCELCDVELADLGF-VKNAGRHLCRPCHNREKAKGLGKYICQRCHLVI-- 147
Query: 56 SEGCEDIVRVISMDRDYHFECYHCEDCRMQLSDEEGCCCFPLDGHLLCHGCH 107
D ++ YH + ++C C +L+ E L G L C CH
Sbjct: 148 -----DEQPLMFRSDAYHPDHFNCTHCGKELTAE----ARELKGELYCLPCH 190
Score = 33.1 bits (74), Expect = 0.051
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 8/87 (9%)
Query: 1 MGKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCE 60
+GK +H F C C K G + YC T Y++ + C C I EG
Sbjct: 213 LGKQWHVEHFVCAKCEKPFLGHRH-YEKKGLAYCETHYNQLFGDVCYNCSHVI---EG-- 266
Query: 61 DIVRVISMDRDYHFECYHCEDCRMQLS 87
D+V ++++ + C+ C C +L+
Sbjct: 267 DVVS--ALNKAWCVSCFSCSTCNSKLT 291
>gi|40804748 LIM and senescent cell antigen-like domains 2 isoform 2
[Homo sapiens]
Length = 365
Score = 54.7 bits (130), Expect = 2e-08
Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 17/109 (15%)
Query: 2 GKSYHPGCFRCIVCNKCLDGIP--FTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGC 59
G+ YH CF VC +C P +F + YC D+ +AP C +CG+ I
Sbjct: 57 GELYHEHCF---VCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAPCCGSCGEFI------ 107
Query: 60 EDIVRVI-SMDRDYHFECYHCEDCRMQLSDEEGCCCFPLDGHLLCHGCH 107
I RVI +M+ ++H C+ CE C ++L+D G LC CH
Sbjct: 108 --IGRVIKAMNNNWHPGCFRCELCDVELAD---LGFVKNAGRHLCRPCH 151
Score = 39.7 bits (91), Expect = 5e-04
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 11/80 (13%)
Query: 4 SYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCEDIV 63
+YHP F C C K L + ++YC+ + K P C AC +PI EG
Sbjct: 182 AYHPDHFNCTHCGKELTAE--ARELKGELYCLPCHDKMGVPICGACRRPI---EG----- 231
Query: 64 RVI-SMDRDYHFECYHCEDC 82
RV+ ++ + +H E + C C
Sbjct: 232 RVVNALGKQWHVEHFVCAKC 251
Score = 37.0 bits (84), Expect = 0.004
Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 17/112 (15%)
Query: 1 MGKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPK-----CAACGQPILP 55
M ++HPGCFRC +C+ L + F V + + C +++ A C C I
Sbjct: 115 MNNNWHPGCFRCELCDVELADLGF-VKNAGRHLCRPCHNREKAKGLGKYICQRCHLVI-- 171
Query: 56 SEGCEDIVRVISMDRDYHFECYHCEDCRMQLSDEEGCCCFPLDGHLLCHGCH 107
D ++ YH + ++C C +L+ E L G L C CH
Sbjct: 172 -----DEQPLMFRSDAYHPDHFNCTHCGKELTAE----ARELKGELYCLPCH 214
Score = 33.1 bits (74), Expect = 0.051
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 8/87 (9%)
Query: 1 MGKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCE 60
+GK +H F C C K G + YC T Y++ + C C I EG
Sbjct: 237 LGKQWHVEHFVCAKCEKPFLGHRH-YEKKGLAYCETHYNQLFGDVCYNCSHVI---EG-- 290
Query: 61 DIVRVISMDRDYHFECYHCEDCRMQLS 87
D+V ++++ + C+ C C +L+
Sbjct: 291 DVVS--ALNKAWCVSCFSCSTCNSKLT 315
>gi|87159836 four and a half LIM domains 2 [Homo sapiens]
Length = 279
Score = 53.9 bits (128), Expect = 3e-08
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Query: 5 YHPGCFRCIVCNKCLDGIPFTV--DFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCEDI 62
+H CF C C K L G FT DF+ YC+ + YA KCA C PI G
Sbjct: 181 WHKECFVCTACRKQLSGQRFTARDDFA---YCLNCFCDLYAKKCAGCTNPI---SGLGGT 234
Query: 63 VRVISMDRDYHFECYHCEDCRMQL 86
+ +R +H +C++C+ C + L
Sbjct: 235 KYISFEERQWHNDCFNCKKCSLSL 258
Score = 53.1 bits (126), Expect = 5e-08
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 2 GKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCED 61
G S+H CF C C + + G + NQ +CV Y K +A +C C +PI
Sbjct: 119 GSSWHETCFICHRCQQPI-GTKSFIPKDNQNFCVPCYEKQHAMQCVQCKKPITTG----- 172
Query: 62 IVRVISMDRDYHFECYHCEDCRMQLSDE 89
V ++ +H EC+ C CR QLS +
Sbjct: 173 --GVTYREQPWHKECFVCTACRKQLSGQ 198
Score = 52.8 bits (125), Expect = 6e-08
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 9/105 (8%)
Query: 10 FRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCEDIVRVISMD 69
F C CN+ L G + + YCV + +A C CG+PI GC D + D
Sbjct: 5 FDCHHCNESLFGKKYILR-EESPYCVVCFETLFANTCEECGKPI----GC-DCKDLSYKD 58
Query: 70 RDYHFECYHCEDCRMQLSDEEGCCCFPLDGHLLCHGCHMQRLNAR 114
R +H C+HC CR L D+ + LLC C+ +++
Sbjct: 59 RHWHEACFHCSQCRNSLVDKPFAA---KEDQLLCTDCYSNEYSSK 100
Score = 46.6 bits (109), Expect = 4e-06
Identities = 28/119 (23%), Positives = 46/119 (38%), Gaps = 14/119 (11%)
Query: 3 KSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCEDI 62
+ +H CF C C L PF +Q+ C Y Y+ KC C + I+P
Sbjct: 59 RHWHEACFHCSQCRNSLVDKPFAAK-EDQLLCTDCYSNEYSSKCQECKKTIMPGTR---- 113
Query: 63 VRVISMDRDYHFECYHCEDCRMQLSDEEGCCCFPLDGHLLCHGCH-----MQRLNARQP 116
++ +H C+ C C+ + + P D C C+ MQ + ++P
Sbjct: 114 -KMEYKGSSWHETCFICHRCQQPIGTKS---FIPKDNQNFCVPCYEKQHAMQCVQCKKP 168
>gi|87159834 four and a half LIM domains 2 [Homo sapiens]
Length = 279
Score = 53.9 bits (128), Expect = 3e-08
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Query: 5 YHPGCFRCIVCNKCLDGIPFTV--DFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCEDI 62
+H CF C C K L G FT DF+ YC+ + YA KCA C PI G
Sbjct: 181 WHKECFVCTACRKQLSGQRFTARDDFA---YCLNCFCDLYAKKCAGCTNPI---SGLGGT 234
Query: 63 VRVISMDRDYHFECYHCEDCRMQL 86
+ +R +H +C++C+ C + L
Sbjct: 235 KYISFEERQWHNDCFNCKKCSLSL 258
Score = 53.1 bits (126), Expect = 5e-08
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 2 GKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCED 61
G S+H CF C C + + G + NQ +CV Y K +A +C C +PI
Sbjct: 119 GSSWHETCFICHRCQQPI-GTKSFIPKDNQNFCVPCYEKQHAMQCVQCKKPITTG----- 172
Query: 62 IVRVISMDRDYHFECYHCEDCRMQLSDE 89
V ++ +H EC+ C CR QLS +
Sbjct: 173 --GVTYREQPWHKECFVCTACRKQLSGQ 198
Score = 52.8 bits (125), Expect = 6e-08
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 9/105 (8%)
Query: 10 FRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCEDIVRVISMD 69
F C CN+ L G + + YCV + +A C CG+PI GC D + D
Sbjct: 5 FDCHHCNESLFGKKYILR-EESPYCVVCFETLFANTCEECGKPI----GC-DCKDLSYKD 58
Query: 70 RDYHFECYHCEDCRMQLSDEEGCCCFPLDGHLLCHGCHMQRLNAR 114
R +H C+HC CR L D+ + LLC C+ +++
Sbjct: 59 RHWHEACFHCSQCRNSLVDKPFAA---KEDQLLCTDCYSNEYSSK 100
Score = 46.6 bits (109), Expect = 4e-06
Identities = 28/119 (23%), Positives = 46/119 (38%), Gaps = 14/119 (11%)
Query: 3 KSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCEDI 62
+ +H CF C C L PF +Q+ C Y Y+ KC C + I+P
Sbjct: 59 RHWHEACFHCSQCRNSLVDKPFAAK-EDQLLCTDCYSNEYSSKCQECKKTIMPGTR---- 113
Query: 63 VRVISMDRDYHFECYHCEDCRMQLSDEEGCCCFPLDGHLLCHGCH-----MQRLNARQP 116
++ +H C+ C C+ + + P D C C+ MQ + ++P
Sbjct: 114 -KMEYKGSSWHETCFICHRCQQPIGTKS---FIPKDNQNFCVPCYEKQHAMQCVQCKKP 168
>gi|42403575 four and a half LIM domains 2 [Homo sapiens]
Length = 279
Score = 53.9 bits (128), Expect = 3e-08
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Query: 5 YHPGCFRCIVCNKCLDGIPFTV--DFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCEDI 62
+H CF C C K L G FT DF+ YC+ + YA KCA C PI G
Sbjct: 181 WHKECFVCTACRKQLSGQRFTARDDFA---YCLNCFCDLYAKKCAGCTNPI---SGLGGT 234
Query: 63 VRVISMDRDYHFECYHCEDCRMQL 86
+ +R +H +C++C+ C + L
Sbjct: 235 KYISFEERQWHNDCFNCKKCSLSL 258
Score = 53.1 bits (126), Expect = 5e-08
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 2 GKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCED 61
G S+H CF C C + + G + NQ +CV Y K +A +C C +PI
Sbjct: 119 GSSWHETCFICHRCQQPI-GTKSFIPKDNQNFCVPCYEKQHAMQCVQCKKPITTG----- 172
Query: 62 IVRVISMDRDYHFECYHCEDCRMQLSDE 89
V ++ +H EC+ C CR QLS +
Sbjct: 173 --GVTYREQPWHKECFVCTACRKQLSGQ 198
Score = 52.8 bits (125), Expect = 6e-08
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 9/105 (8%)
Query: 10 FRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCEDIVRVISMD 69
F C CN+ L G + + YCV + +A C CG+PI GC D + D
Sbjct: 5 FDCHHCNESLFGKKYILR-EESPYCVVCFETLFANTCEECGKPI----GC-DCKDLSYKD 58
Query: 70 RDYHFECYHCEDCRMQLSDEEGCCCFPLDGHLLCHGCHMQRLNAR 114
R +H C+HC CR L D+ + LLC C+ +++
Sbjct: 59 RHWHEACFHCSQCRNSLVDKPFAA---KEDQLLCTDCYSNEYSSK 100
Score = 46.6 bits (109), Expect = 4e-06
Identities = 28/119 (23%), Positives = 46/119 (38%), Gaps = 14/119 (11%)
Query: 3 KSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCEDI 62
+ +H CF C C L PF +Q+ C Y Y+ KC C + I+P
Sbjct: 59 RHWHEACFHCSQCRNSLVDKPFAAK-EDQLLCTDCYSNEYSSKCQECKKTIMPGTR---- 113
Query: 63 VRVISMDRDYHFECYHCEDCRMQLSDEEGCCCFPLDGHLLCHGCH-----MQRLNARQP 116
++ +H C+ C C+ + + P D C C+ MQ + ++P
Sbjct: 114 -KMEYKGSSWHETCFICHRCQQPIGTKS---FIPKDNQNFCVPCYEKQHAMQCVQCKKP 168
>gi|87159832 four and a half LIM domains 2 [Homo sapiens]
Length = 279
Score = 53.9 bits (128), Expect = 3e-08
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Query: 5 YHPGCFRCIVCNKCLDGIPFTV--DFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCEDI 62
+H CF C C K L G FT DF+ YC+ + YA KCA C PI G
Sbjct: 181 WHKECFVCTACRKQLSGQRFTARDDFA---YCLNCFCDLYAKKCAGCTNPI---SGLGGT 234
Query: 63 VRVISMDRDYHFECYHCEDCRMQL 86
+ +R +H +C++C+ C + L
Sbjct: 235 KYISFEERQWHNDCFNCKKCSLSL 258
Score = 53.1 bits (126), Expect = 5e-08
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 2 GKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCED 61
G S+H CF C C + + G + NQ +CV Y K +A +C C +PI
Sbjct: 119 GSSWHETCFICHRCQQPI-GTKSFIPKDNQNFCVPCYEKQHAMQCVQCKKPITTG----- 172
Query: 62 IVRVISMDRDYHFECYHCEDCRMQLSDE 89
V ++ +H EC+ C CR QLS +
Sbjct: 173 --GVTYREQPWHKECFVCTACRKQLSGQ 198
Score = 52.8 bits (125), Expect = 6e-08
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 9/105 (8%)
Query: 10 FRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCEDIVRVISMD 69
F C CN+ L G + + YCV + +A C CG+PI GC D + D
Sbjct: 5 FDCHHCNESLFGKKYILR-EESPYCVVCFETLFANTCEECGKPI----GC-DCKDLSYKD 58
Query: 70 RDYHFECYHCEDCRMQLSDEEGCCCFPLDGHLLCHGCHMQRLNAR 114
R +H C+HC CR L D+ + LLC C+ +++
Sbjct: 59 RHWHEACFHCSQCRNSLVDKPFAA---KEDQLLCTDCYSNEYSSK 100
Score = 46.6 bits (109), Expect = 4e-06
Identities = 28/119 (23%), Positives = 46/119 (38%), Gaps = 14/119 (11%)
Query: 3 KSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCEDI 62
+ +H CF C C L PF +Q+ C Y Y+ KC C + I+P
Sbjct: 59 RHWHEACFHCSQCRNSLVDKPFAAK-EDQLLCTDCYSNEYSSKCQECKKTIMPGTR---- 113
Query: 63 VRVISMDRDYHFECYHCEDCRMQLSDEEGCCCFPLDGHLLCHGCH-----MQRLNARQP 116
++ +H C+ C C+ + + P D C C+ MQ + ++P
Sbjct: 114 -KMEYKGSSWHETCFICHRCQQPIGTKS---FIPKDNQNFCVPCYEKQHAMQCVQCKKP 168
>gi|170932518 paxillin isoform 3 [Homo sapiens]
Length = 424
Score = 53.5 bits (127), Expect = 4e-08
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Query: 1 MGKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCE 60
MGK++HP F C C + + F + Q YC DYH ++P+C C PIL
Sbjct: 206 MGKTWHPEHFVCTHCQEEIGSRNF-FERDGQPYCEKDYHNLFSPRCYYCNGPILDKV--- 261
Query: 61 DIVRVISMDRDYHFECYHCEDC 82
V ++DR +H E + C C
Sbjct: 262 ----VTALDRTWHPEHFFCAQC 279
Score = 43.5 bits (101), Expect = 4e-05
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 8/82 (9%)
Query: 1 MGKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCE 60
+ +++HP F C C F + + YC DY +APKC C + IL +
Sbjct: 265 LDRTWHPEHFFCAQCGAFFGPEGFH-EKDGKAYCRKDYFDMFAPKCGGCARAILEN---- 319
Query: 61 DIVRVISMDRDYHFECYHCEDC 82
+ +++ +H EC+ C +C
Sbjct: 320 ---YISALNTLWHPECFVCREC 338
Score = 40.4 bits (93), Expect = 3e-04
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 16/87 (18%)
Query: 5 YHPGCFRCIVCNKCLDGIPFT----VDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCE 60
+HP CF VC +C PF + Q YC YH+ C+ C +PI + C
Sbjct: 328 WHPECF---VCRECFT--PFVNGSFFEHDGQPYCEVHYHERRGSLCSGCQKPI--TGRC- 379
Query: 61 DIVRVISMDRDYHFECYHCEDCRMQLS 87
+ +M + +H E + C C QL+
Sbjct: 380 ----ITAMAKKFHPEHFVCAFCLKQLN 402
>gi|170932516 paxillin isoform 2 [Homo sapiens]
Length = 557
Score = 53.5 bits (127), Expect = 4e-08
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Query: 1 MGKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCE 60
MGK++HP F C C + + F + Q YC DYH ++P+C C PIL
Sbjct: 339 MGKTWHPEHFVCTHCQEEIGSRNF-FERDGQPYCEKDYHNLFSPRCYYCNGPILDKV--- 394
Query: 61 DIVRVISMDRDYHFECYHCEDC 82
V ++DR +H E + C C
Sbjct: 395 ----VTALDRTWHPEHFFCAQC 412
Score = 43.5 bits (101), Expect = 4e-05
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 8/82 (9%)
Query: 1 MGKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCE 60
+ +++HP F C C F + + YC DY +APKC C + IL +
Sbjct: 398 LDRTWHPEHFFCAQCGAFFGPEGFH-EKDGKAYCRKDYFDMFAPKCGGCARAILEN---- 452
Query: 61 DIVRVISMDRDYHFECYHCEDC 82
+ +++ +H EC+ C +C
Sbjct: 453 ---YISALNTLWHPECFVCREC 471
Score = 40.4 bits (93), Expect = 3e-04
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 16/87 (18%)
Query: 5 YHPGCFRCIVCNKCLDGIPFT----VDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCE 60
+HP CF VC +C PF + Q YC YH+ C+ C +PI + C
Sbjct: 461 WHPECF---VCRECFT--PFVNGSFFEHDGQPYCEVHYHERRGSLCSGCQKPI--TGRC- 512
Query: 61 DIVRVISMDRDYHFECYHCEDCRMQLS 87
+ +M + +H E + C C QL+
Sbjct: 513 ----ITAMAKKFHPEHFVCAFCLKQLN 535
>gi|170932514 paxillin isoform 1 [Homo sapiens]
Length = 591
Score = 53.5 bits (127), Expect = 4e-08
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Query: 1 MGKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCE 60
MGK++HP F C C + + F + Q YC DYH ++P+C C PIL
Sbjct: 373 MGKTWHPEHFVCTHCQEEIGSRNF-FERDGQPYCEKDYHNLFSPRCYYCNGPILDKV--- 428
Query: 61 DIVRVISMDRDYHFECYHCEDC 82
V ++DR +H E + C C
Sbjct: 429 ----VTALDRTWHPEHFFCAQC 446
Score = 43.5 bits (101), Expect = 4e-05
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 8/82 (9%)
Query: 1 MGKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCE 60
+ +++HP F C C F + + YC DY +APKC C + IL +
Sbjct: 432 LDRTWHPEHFFCAQCGAFFGPEGFH-EKDGKAYCRKDYFDMFAPKCGGCARAILEN---- 486
Query: 61 DIVRVISMDRDYHFECYHCEDC 82
+ +++ +H EC+ C +C
Sbjct: 487 ---YISALNTLWHPECFVCREC 505
Score = 40.4 bits (93), Expect = 3e-04
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 16/87 (18%)
Query: 5 YHPGCFRCIVCNKCLDGIPFT----VDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCE 60
+HP CF VC +C PF + Q YC YH+ C+ C +PI + C
Sbjct: 495 WHPECF---VCRECFT--PFVNGSFFEHDGQPYCEVHYHERRGSLCSGCQKPI--TGRC- 546
Query: 61 DIVRVISMDRDYHFECYHCEDCRMQLS 87
+ +M + +H E + C C QL+
Sbjct: 547 ----ITAMAKKFHPEHFVCAFCLKQLN 569
>gi|239741720 PREDICTED: hypothetical protein XP_002342298 [Homo
sapiens]
Length = 248
Score = 53.5 bits (127), Expect = 4e-08
Identities = 36/109 (33%), Positives = 50/109 (45%), Gaps = 17/109 (15%)
Query: 2 GKSYHPGCFRCIVCNKCLDGIP--FTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGC 59
G+ YH CF VC +C P +F + YC D+ +AP C CG+ I
Sbjct: 90 GELYHEQCF---VCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFI------ 140
Query: 60 EDIVRVI-SMDRDYHFECYHCEDCRMQLSDEEGCCCFPLDGHLLCHGCH 107
I RVI +M+ +H EC+ C+ C+ L+D G LC CH
Sbjct: 141 --IGRVIKAMNNSWHPECFRCDLCQEVLAD---IGFVKNAGRHLCRPCH 184
Score = 36.2 bits (82), Expect = 0.006
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 12/97 (12%)
Query: 1 MGKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCE 60
M S+HP CFRC +C + L I F V + + C +++ K G+ I + C
Sbjct: 148 MNNSWHPECFRCDLCQEVLADIGF-VKNAGRHLCRPCHNRE---KARGLGKYI--CQKCH 201
Query: 61 DIV---RVISMDRDYHFECYHCEDCRMQLSDEEGCCC 94
I+ +I + YH + ++C +C + SD C C
Sbjct: 202 AIIDEQPLIFKNDPYHPDHFNCANCGQEGSD---CRC 235
>gi|13518026 LIM and senescent cell antigen-like domains 1 [Homo
sapiens]
Length = 325
Score = 53.5 bits (127), Expect = 4e-08
Identities = 36/109 (33%), Positives = 50/109 (45%), Gaps = 17/109 (15%)
Query: 2 GKSYHPGCFRCIVCNKCLDGIP--FTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGC 59
G+ YH CF VC +C P +F + YC D+ +AP C CG+ I
Sbjct: 28 GELYHEQCF---VCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFI------ 78
Query: 60 EDIVRVI-SMDRDYHFECYHCEDCRMQLSDEEGCCCFPLDGHLLCHGCH 107
I RVI +M+ +H EC+ C+ C+ L+D G LC CH
Sbjct: 79 --IGRVIKAMNNSWHPECFRCDLCQEVLAD---IGFVKNAGRHLCRPCH 122
Score = 40.4 bits (93), Expect = 3e-04
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 1 MGKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCE 60
M S+HP CFRC +C + L I F V + + C +++ K G+ I + C
Sbjct: 86 MNNSWHPECFRCDLCQEVLADIGF-VKNAGRHLCRPCHNRE---KARGLGKYI--CQKCH 139
Query: 61 DIV---RVISMDRDYHFECYHCEDCRMQLSDEEGCCCFPLDGHLLCHGCH 107
I+ +I + YH + ++C +C +L+ + L G L C CH
Sbjct: 140 AIIDEQPLIFKNDPYHPDHFNCANCGKELTAD----ARELKGELYCLPCH 185
Score = 40.4 bits (93), Expect = 3e-04
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 11/79 (13%)
Query: 5 YHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCEDIVR 64
YHP F C C K L + ++YC+ + K P C AC +PI EG R
Sbjct: 154 YHPDHFNCANCGKELTAD--ARELKGELYCLPCHDKMGVPICGACRRPI---EG-----R 203
Query: 65 VI-SMDRDYHFECYHCEDC 82
V+ +M + +H E + C C
Sbjct: 204 VVNAMGKQWHVEHFVCAKC 222
Score = 34.3 bits (77), Expect = 0.023
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 8/87 (9%)
Query: 1 MGKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCE 60
MGK +H F C C K G + YC T Y++ + C C + I EG
Sbjct: 208 MGKQWHVEHFVCAKCEKPFLGHRH-YERKGLAYCETHYNQLFGDVCFHCNRVI---EG-- 261
Query: 61 DIVRVISMDRDYHFECYHCEDCRMQLS 87
D+V ++++ + C+ C C +L+
Sbjct: 262 DVVS--ALNKAWCVNCFACSTCNTKLT 286
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.329 0.145 0.528
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,929,079
Number of Sequences: 37866
Number of extensions: 278854
Number of successful extensions: 1475
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 74
Number of HSP's that attempted gapping in prelim test: 946
Number of HSP's gapped (non-prelim): 380
length of query: 121
length of database: 18,247,518
effective HSP length: 89
effective length of query: 32
effective length of database: 14,877,444
effective search space: 476078208
effective search space used: 476078208
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.