Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 37675277
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|37675277 ring finger protein 148 [Homo sapiens]
(305 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|37675277 ring finger protein 148 [Homo sapiens] 630 0.0
gi|21040269 ring finger protein 133 [Homo sapiens] 353 1e-97
gi|37588873 ring finger protein 128 isoform 1 [Homo sapiens] 295 3e-80
gi|37588871 ring finger protein 128 isoform 2 [Homo sapiens] 264 8e-71
gi|29789407 ring finger protein 149 [Homo sapiens] 211 6e-55
gi|58331204 ring finger protein 150 [Homo sapiens] 206 2e-53
gi|29788758 ring finger protein 130 [Homo sapiens] 184 8e-47
gi|34577087 ring finger protein 13 [Homo sapiens] 82 5e-16
gi|6005864 ring finger protein 13 [Homo sapiens] 82 5e-16
gi|150170725 zinc and ring finger 4 [Homo sapiens] 72 8e-13
gi|14149702 ring finger protein 167 [Homo sapiens] 69 7e-12
gi|63025220 ring finger protein 215 [Homo sapiens] 65 1e-10
gi|7662486 ring finger protein 44 [Homo sapiens] 64 2e-10
gi|150378447 zinc and ring finger 3 [Homo sapiens] 63 3e-10
gi|197245452 ring finger protein 24 isoform 2 [Homo sapiens] 63 4e-10
gi|197245450 ring finger protein 24 isoform 1 [Homo sapiens] 63 4e-10
gi|6857791 ring finger protein 24 isoform 1 [Homo sapiens] 63 4e-10
gi|37577185 ring finger protein 38 isoform 2 [Homo sapiens] 60 2e-09
gi|37577181 ring finger protein 38 isoform 2 [Homo sapiens] 60 2e-09
gi|37577179 ring finger protein 38 isoform 3 [Homo sapiens] 60 2e-09
gi|37577177 ring finger protein 38 isoform 2 [Homo sapiens] 60 2e-09
gi|37577175 ring finger protein 38 isoform 1 [Homo sapiens] 60 2e-09
gi|56711322 ring finger protein 43 [Homo sapiens] 59 5e-09
gi|33859668 Rabring 7 [Homo sapiens] 59 5e-09
gi|37595553 ring finger protein 111 [Homo sapiens] 59 7e-09
gi|239749332 PREDICTED: hypothetical protein XP_002347002 [Homo ... 57 2e-08
gi|239743424 PREDICTED: hypothetical protein XP_002342853 [Homo ... 57 2e-08
gi|21071001 autocrine motility factor receptor [Homo sapiens] 56 5e-08
gi|57165361 ring finger protein 165 [Homo sapiens] 56 5e-08
gi|7662244 DAZ interacting protein 3, zinc finger [Homo sapiens] 55 1e-07
>gi|37675277 ring finger protein 148 [Homo sapiens]
Length = 305
Score = 630 bits (1625), Expect = 0.0
Identities = 305/305 (100%), Positives = 305/305 (100%)
Query: 1 MSFLRITPSTHSSVSSGLLRLSIFLLLSFPDSNGKAIWTAHLNITFQVGNEITSELGESG 60
MSFLRITPSTHSSVSSGLLRLSIFLLLSFPDSNGKAIWTAHLNITFQVGNEITSELGESG
Sbjct: 1 MSFLRITPSTHSSVSSGLLRLSIFLLLSFPDSNGKAIWTAHLNITFQVGNEITSELGESG 60
Query: 61 VFGNHSPLERVSGVVALPEGWNQNACHPLTNFSRPKQADSWLALIERGGCTFTHKINVAA 120
VFGNHSPLERVSGVVALPEGWNQNACHPLTNFSRPKQADSWLALIERGGCTFTHKINVAA
Sbjct: 61 VFGNHSPLERVSGVVALPEGWNQNACHPLTNFSRPKQADSWLALIERGGCTFTHKINVAA 120
Query: 121 EKGANGVIIYNYQGTGSKVFPMSHQGTENIVAVMISNLKGMEILHSIQKGVYVTVIIEVG 180
EKGANGVIIYNYQGTGSKVFPMSHQGTENIVAVMISNLKGMEILHSIQKGVYVTVIIEVG
Sbjct: 121 EKGANGVIIYNYQGTGSKVFPMSHQGTENIVAVMISNLKGMEILHSIQKGVYVTVIIEVG 180
Query: 181 RMHMQWVSHYIMYLFTFLAATIAYFYLDCVWRLTPRVPNSFTRRRSQIKTDVKKAIDQLQ 240
RMHMQWVSHYIMYLFTFLAATIAYFYLDCVWRLTPRVPNSFTRRRSQIKTDVKKAIDQLQ
Sbjct: 181 RMHMQWVSHYIMYLFTFLAATIAYFYLDCVWRLTPRVPNSFTRRRSQIKTDVKKAIDQLQ 240
Query: 241 LRVLKEGDEELDLNEDNCVVCFDTYKPQDVVRILTCKHFFHKACIDPWLLAHRTCPMCKC 300
LRVLKEGDEELDLNEDNCVVCFDTYKPQDVVRILTCKHFFHKACIDPWLLAHRTCPMCKC
Sbjct: 241 LRVLKEGDEELDLNEDNCVVCFDTYKPQDVVRILTCKHFFHKACIDPWLLAHRTCPMCKC 300
Query: 301 DILKT 305
DILKT
Sbjct: 301 DILKT 305
>gi|21040269 ring finger protein 133 [Homo sapiens]
Length = 376
Score = 353 bits (905), Expect = 1e-97
Identities = 169/305 (55%), Positives = 221/305 (72%), Gaps = 4/305 (1%)
Query: 1 MSFLRITPSTHSSVSSGLLRLSIFLLLSFPDSNGKAIWTAHLNITFQVGNEITSELGESG 60
M L++ +++ SS L++ S+ L+S +W A++NI+F VGN + SELGE+G
Sbjct: 1 MHLLKVGTWRNNTASSWLMKFSVLWLVSQNCCRASVVWMAYMNISFHVGNHVLSELGETG 60
Query: 61 VFGNHSPLERVSGVVALPEGWNQNACHPLTNFSRPKQADSWLALIERGGCTFTHKINVAA 120
VFG S L+RV+GV+ PEG QNAC+P T FSR K +++WLALIERGGCTFT KI VA
Sbjct: 61 VFGRSSTLKRVAGVIVPPEGKIQNACNPNTIFSRSKYSETWLALIERGGCTFTQKIKVAT 120
Query: 121 EKGANGVIIYNYQGTGSKVFPMSHQGTENIVAVMISNLKGMEILHSIQKGVYVTVIIEVG 180
EKGA+GVIIYN GTG++VFPM HQ E++V VMI NLKG EI H I+KGV +T ++EVG
Sbjct: 121 EKGASGVIIYNVPGTGNQVFPMFHQAFEDVVVVMIGNLKGTEIFHLIKKGVLITAVVEVG 180
Query: 181 RMHMQWVSHYIMYLFTFLAATIAYFYLDCVWRL-TPRVPNSFTRRRSQIKTDVKKAIDQL 239
R H+ W++HY++ AT+AYF + RL R+ N RR ++ TD++ QL
Sbjct: 181 RKHIIWMNHYLVSFVIVTTATLAYFIFYHIHRLCLARIQN---RRWQRLTTDLQNTFGQL 237
Query: 240 QLRVLKEGDEELDLNEDNCVVCFDTYKPQDVVRILTCKHFFHKACIDPWLLAHRTCPMCK 299
QLRV+KEGDEE++ N D+CV+CF+ YKP D+VRILTCKHFFHK CIDPW+L H TCP+CK
Sbjct: 238 QLRVVKEGDEEINPNGDSCVICFERYKPNDIVRILTCKHFFHKNCIDPWILPHGTCPICK 297
Query: 300 CDILK 304
CDILK
Sbjct: 298 CDILK 302
>gi|37588873 ring finger protein 128 isoform 1 [Homo sapiens]
Length = 428
Score = 295 bits (756), Expect = 3e-80
Identities = 154/301 (51%), Positives = 204/301 (67%), Gaps = 22/301 (7%)
Query: 24 FLLLSFPDSNG----KAIWTAHLNITFQVG----NEITSELGESGVFGNHSPLERVSGVV 75
FLL P + G +A+WTA+LN++++V N EL E GV+G SPLE V+GV+
Sbjct: 25 FLLALSPQAPGSRGAEAVWTAYLNVSWRVPHTGVNRTVWELSEEGVYGQDSPLEPVAGVL 84
Query: 76 ALPEGWNQ-NACHPLTNFSRPKQADS-----WLALIERGG-CTFTHKINVAAEKGANGVI 128
P+G NAC+P TNF+ P S WLALI+RGG CTF KI++A E+GA+G +
Sbjct: 85 VPPDGPGALNACNPHTNFTVPTVWGSTVQVSWLALIQRGGGCTFADKIHLAYERGASGAV 144
Query: 129 IYNYQGTGSKVFPMSHQGTENIVAVMISNLKGMEILHSIQKGVYVTVIIEVGRMHMQWVS 188
I+N+ GT ++V PMSH G +IVA+MI NLKG +IL SIQ+G+ VT++IEVG+ H WV+
Sbjct: 145 IFNFPGTRNEVIPMSHPGAVDIVAIMIGNLKGTKILQSIQRGIQVTMVIEVGKKHGPWVN 204
Query: 189 HYIMYL-----FTFLAATIAYFYLDCVWRLTPRVPNSFTRRRSQIKTDVKKAIDQLQLRV 243
HY ++ F AAT+ YF RL R + +R++ Q+K D KKAI +LQLR
Sbjct: 205 HYSIFFVSVSFFIITAATVGYFIFYSARRL--RNARAQSRKQRQLKADAKKAIGRLQLRT 262
Query: 244 LKEGDEELDLNEDNCVVCFDTYKPQDVVRILTCKHFFHKACIDPWLLAHRTCPMCKCDIL 303
LK+GD+E+ + D+C VC + YKP D+VRILTC H FHK C+DPWLL HRTCPMCKCDIL
Sbjct: 263 LKQGDKEIGPDGDSCAVCIELYKPNDLVRILTCNHIFHKTCVDPWLLEHRTCPMCKCDIL 322
Query: 304 K 304
K
Sbjct: 323 K 323
>gi|37588871 ring finger protein 128 isoform 2 [Homo sapiens]
Length = 402
Score = 264 bits (674), Expect = 8e-71
Identities = 132/273 (48%), Positives = 178/273 (65%), Gaps = 11/273 (4%)
Query: 39 TAHLNITF--QVGNEITSELGESGVFGNHSPLERVSGVVALPEGWNQNACHPLTNFSRPK 96
+A++ +T+ + N E E GV+G SP+ GVV +P+ N AC T FS K
Sbjct: 29 SAYVTVTYYNETSNYTAIETCECGVYGLASPVANAMGVVGIPKNNNYQACDHNTEFSNTK 88
Query: 97 QADSWLALIERGGCTFTHKINVAAEKGANGVIIYNYQGTGSKVFPMSHQGTENIVAVMIS 156
+ W+ALIERG CTF+ KI A + A+ V+IYN TG++ M++ G +IVA+MI
Sbjct: 89 KP--WIALIERGNCTFSEKIQTAGRRNADAVVIYNAPETGNQTIQMANFGAVDIVAIMIG 146
Query: 157 NLKGMEILHSIQKGVYVTVIIEVGRMHMQWVSHYIMYL-----FTFLAATIAYFYLDCVW 211
NLKG +IL SIQ+G+ VT++IEVG+ H WV+HY ++ F AAT+ YF
Sbjct: 147 NLKGTKILQSIQRGIQVTMVIEVGKKHGPWVNHYSIFFVSVSFFIITAATVGYFIFYSAR 206
Query: 212 RLTPRVPNSFTRRRSQIKTDVKKAIDQLQLRVLKEGDEELDLNEDNCVVCFDTYKPQDVV 271
RL R + +R++ Q+K D KKAI +LQLR LK+GD+E+ + D+C VC + YKP D+V
Sbjct: 207 RL--RNARAQSRKQRQLKADAKKAIGRLQLRTLKQGDKEIGPDGDSCAVCIELYKPNDLV 264
Query: 272 RILTCKHFFHKACIDPWLLAHRTCPMCKCDILK 304
RILTC H FHK C+DPWLL HRTCPMCKCDILK
Sbjct: 265 RILTCNHIFHKTCVDPWLLEHRTCPMCKCDILK 297
>gi|29789407 ring finger protein 149 [Homo sapiens]
Length = 400
Score = 211 bits (537), Expect = 6e-55
Identities = 123/304 (40%), Positives = 175/304 (57%), Gaps = 18/304 (5%)
Query: 17 GLLRLSIFLL-LSFPDSNGKAI--WTAHLNITF--QVGNEITSELGESGVFGNHSPLERV 71
G+L L++ L L P + G+A+ ++A +NI + N + ESG FG+ SP E
Sbjct: 14 GVLALALLALALCVPGARGRALEWFSAVVNIEYVDPQTNLTVWSVSESGRFGDSSPKEGA 73
Query: 72 SGVVALP--EGWNQNACHPLTNFSRPKQ----ADSWLALIERGGCTFTHKINVAAEKGAN 125
G+V +P G + C P T F P+ A W+AL+ RGGCTF K+ VAA + A+
Sbjct: 74 HGLVGVPWAPGGDLEGCAPDTRFFVPEPGGRGAAPWVALVARGGCTFKDKVLVAARRNAS 133
Query: 126 GVIIYNYQGTGSKVFPMSHQGTENIVAVMISNLKGMEILHSIQKGVYVTVIIEVGRMHMQ 185
V++YN + G+ PMSH GT NIV +MIS KG EIL +QKG+ VT+ I VG H+Q
Sbjct: 134 AVVLYNEERYGNITLPMSHAGTGNIVVIMISYPKGREILELVQKGIPVTMTIGVGTRHVQ 193
Query: 186 WVSHYIMYLFTFLAATIAYFYLDCVWRLTPRVPNSFTRRRSQI-----KTDVKKAIDQLQ 240
+F +A I + W + + F SQI + + KK I QL
Sbjct: 194 EFISGQSVVFVAIAF-ITMMIISLAWLIFYYIQR-FLYTGSQIGSQSHRKETKKVIGQLL 251
Query: 241 LRVLKEGDEELDLNEDNCVVCFDTYKPQDVVRILTCKHFFHKACIDPWLLAHRTCPMCKC 300
L +K G++ +D++ +NC VC + +K +D++RIL CKH FH+ CIDPWLL HRTCPMCK
Sbjct: 252 LHTVKHGEKGIDVDAENCAVCIENFKVKDIIRILPCKHIFHRICIDPWLLDHRTCPMCKL 311
Query: 301 DILK 304
D++K
Sbjct: 312 DVIK 315
>gi|58331204 ring finger protein 150 [Homo sapiens]
Length = 438
Score = 206 bits (524), Expect = 2e-53
Identities = 113/303 (37%), Positives = 169/303 (55%), Gaps = 28/303 (9%)
Query: 25 LLLSFPDSNGKAIWTAHLNITFQV-------------GNEITSELGESGVFGNHSPLERV 71
L L F + + +TA +NIT+ G E+ +E E G +G HSP +
Sbjct: 27 LCLDFTVAEKEEWYTAFVNITYAEPAPDPGAGAAGGGGAELHTEKTECGRYGEHSPKQDA 86
Query: 72 SG-VVALPEGWNQNACHPLTNFSRPKQADSWLALIERGGCTFTHKINVAAEKGANGVIIY 130
G VV ++ AC P T F+ P + +W+ALI +G CT+ KI A + A+ V+I+
Sbjct: 87 RGEVVMASSAHDRLACDPNTKFAAPTRGKNWIALIPKGNCTYRDKIRNAFLQNASAVVIF 146
Query: 131 NYQGTGSKVFPMSHQGTENIVAVMISNLKGMEILHSIQKGVYVTVIIEVGRMHMQ----- 185
N ++ M H G E+IVA+MI KG EI+ +++ + VT+ I +G ++Q
Sbjct: 147 NVGSNTNETITMPHAGVEDIVAIMIPEPKGKEIVSLLERNITVTMYITIGTRNLQKYVSR 206
Query: 186 ----WVSHYIMYLFTFLAATIAYFYLDCVWRLTPRVPNSFTRRRSQIKTDVKKAIDQLQL 241
+VS + L A + ++Y+ R N+ R + ++ KKAI +LQ+
Sbjct: 207 TSVVFVSISFIVLMIISLAWLVFYYIQRF-----RYANARDRNQRRLGDAAKKAISKLQI 261
Query: 242 RVLKEGDEELDLNEDNCVVCFDTYKPQDVVRILTCKHFFHKACIDPWLLAHRTCPMCKCD 301
R +K+GD+E + + DNC VC + YKP DVVRIL C+H FHK+C+DPWLL HRTCPMCK +
Sbjct: 262 RTIKKGDKETESDFDNCAVCIEGYKPNDVVRILPCRHLFHKSCVDPWLLDHRTCPMCKMN 321
Query: 302 ILK 304
ILK
Sbjct: 322 ILK 324
>gi|29788758 ring finger protein 130 [Homo sapiens]
Length = 419
Score = 184 bits (467), Expect = 8e-47
Identities = 110/290 (37%), Positives = 161/290 (55%), Gaps = 23/290 (7%)
Query: 31 DSNGKAIWTAHLNITFQV---GNEITSELGESGVFGNHSPLERVSGVVALPEGWNQNA-- 85
D+ + +TA +N+T Q G +T + + G +G SP V G V P + A
Sbjct: 28 DNASQEYYTALINVTVQEPGRGAPLTFRI-DRGRYGLDSPKAEVRGQVLAPLPLHGVADH 86
Query: 86 --CHPLTNFSRPKQADSWLALIERGGCTFTHKINVAAEKGANGVIIYNYQGTGSKVFPMS 143
C P T F P W+AL++RG CTF KI+ AA A V+IYN + V M+
Sbjct: 87 LGCDPQTRFFVPPNIKQWIALLQRGNCTFKEKISRAAFHNAVAVVIYNNKSKEEPV-TMT 145
Query: 144 HQGTENIVAVMISNLKGMEILHSIQKGVYVTVIIEVG---------RMHMQWVSHYIMYL 194
H GT +I+AVMI+ L+G +IL ++K + V + I VG R + +VS + L
Sbjct: 146 HPGTGDIIAVMITELRGKDILSYLEKNISVQMTIAVGTRMPPKNFSRGSLVFVSISFIVL 205
Query: 195 FTFLAATIAYFYLDCVWRLTPRVPNSFTRRRSQIKTDVKKAIDQLQLRVLKEGDEELDLN 254
+A + ++++ + R N+ R + ++ KKAI +L R +K+GD+E D +
Sbjct: 206 MIISSAWLIFYFIQKI-----RYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPD 260
Query: 255 EDNCVVCFDTYKPQDVVRILTCKHFFHKACIDPWLLAHRTCPMCKCDILK 304
D+C VC ++YK DVVRIL CKH FHK+C+DPWL H TCPMCK +ILK
Sbjct: 261 FDHCAVCIESYKQNDVVRILPCKHVFHKSCVDPWLSEHCTCPMCKLNILK 310
>gi|34577087 ring finger protein 13 [Homo sapiens]
Length = 381
Score = 82.4 bits (202), Expect = 5e-16
Identities = 66/244 (27%), Positives = 106/244 (43%), Gaps = 22/244 (9%)
Query: 62 FGNHSPLERVSGVVALPEGWNQNACHPLTNFS-RPKQADSWLALIERGGCTFTHKINVAA 120
FG P E + G L +NAC P+ + + +++ LI R C F K+ A
Sbjct: 55 FGYRLPAEGLKGF--LINSKPENACEPIVPPPVKDNSSGTFIVLIRRLDCNFDIKVLNAQ 112
Query: 121 EKGANGVIIYNYQGTGSKVFPMSHQGTENIVAVMISNLKGMEILHSIQKGVYVTVIIEVG 180
G I++N + G+ +I + ++ + I S + E G
Sbjct: 113 RAGYKAAIVHNVDSDD-----LISMGSNDIEVLKKIDIPSVFIGESSANSLKDEFTYEKG 167
Query: 181 RMHMQWVSHYIM----YLFTFLAATIAYFYLDCVWRLTPRVPNSFTRRRSQIKTDVKKAI 236
H+ V + + YL FL L ++ +T V + RR++++ D K
Sbjct: 168 G-HLILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLK-- 224
Query: 237 DQLQLRVLKEGDEELDLNEDNCVVCFDTYKPQDVVRILTCKHFFHKACIDPWLL-AHRTC 295
+L + K+GDE D C +C D Y+ D +RIL C H +H C+DPWL +TC
Sbjct: 225 -KLPVHKFKKGDEY-----DVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTC 278
Query: 296 PMCK 299
P+CK
Sbjct: 279 PVCK 282
>gi|6005864 ring finger protein 13 [Homo sapiens]
Length = 381
Score = 82.4 bits (202), Expect = 5e-16
Identities = 66/244 (27%), Positives = 106/244 (43%), Gaps = 22/244 (9%)
Query: 62 FGNHSPLERVSGVVALPEGWNQNACHPLTNFS-RPKQADSWLALIERGGCTFTHKINVAA 120
FG P E + G L +NAC P+ + + +++ LI R C F K+ A
Sbjct: 55 FGYRLPAEGLKGF--LINSKPENACEPIVPPPVKDNSSGTFIVLIRRLDCNFDIKVLNAQ 112
Query: 121 EKGANGVIIYNYQGTGSKVFPMSHQGTENIVAVMISNLKGMEILHSIQKGVYVTVIIEVG 180
G I++N + G+ +I + ++ + I S + E G
Sbjct: 113 RAGYKAAIVHNVDSDD-----LISMGSNDIEVLKKIDIPSVFIGESSANSLKDEFTYEKG 167
Query: 181 RMHMQWVSHYIM----YLFTFLAATIAYFYLDCVWRLTPRVPNSFTRRRSQIKTDVKKAI 236
H+ V + + YL FL L ++ +T V + RR++++ D K
Sbjct: 168 G-HLILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLK-- 224
Query: 237 DQLQLRVLKEGDEELDLNEDNCVVCFDTYKPQDVVRILTCKHFFHKACIDPWLL-AHRTC 295
+L + K+GDE D C +C D Y+ D +RIL C H +H C+DPWL +TC
Sbjct: 225 -KLPVHKFKKGDEY-----DVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTC 278
Query: 296 PMCK 299
P+CK
Sbjct: 279 PVCK 282
>gi|150170725 zinc and ring finger 4 [Homo sapiens]
Length = 429
Score = 71.6 bits (174), Expect = 8e-13
Identities = 64/260 (24%), Positives = 105/260 (40%), Gaps = 39/260 (15%)
Query: 68 LERVSGVVALPEGWN--------QNACHPLTNFSRPKQADSWLALIERGGCTFTHKINVA 119
L + GV PEG NACHP+ ++ + LI R CTF K+ A
Sbjct: 116 LPALFGVPLAPEGIRGYLMEVKPANACHPIEAPRLGNRSLGAIVLIRRYDCTFDLKVLNA 175
Query: 120 AEKGANGVIIYNYQGTGSKVFPMSH-----QGTENIVAVMISNL--KGMEILHSIQKGVY 172
G I++N + M+H +G I +V +S + + ++ K +
Sbjct: 176 QRAGFEAAIVHNVHS--DDLVSMTHVYEDLRGQIAIPSVFVSEAASQDLRVILGCNKSAH 233
Query: 173 VTVIIEVGRMHMQWVSHYIMYLFTFLAATIA-----YFYLDCVWRLTPRVPNSFTRRRSQ 227
++ + H H ++ + L T+A +F L+ +W + R
Sbjct: 234 ALLLPDDPPCH-DLGCHPVLTVSWVLGCTLALVVSAFFVLNHLWLWA----QACCSHRRP 288
Query: 228 IKTDVKKAIDQLQLRVLKEGDEELDLNEDNCVVCFDTYKPQDVVRILTCKHFFHKACIDP 287
+KT + Q+R + D C +C D Y+ D ++IL C H +H CIDP
Sbjct: 289 VKTST---CQKAQVRTFT-------WHNDLCAICLDEYEEGDQLKILPCSHTYHCKCIDP 338
Query: 288 WL--LAHRTCPMCKCDILKT 305
W R+CP+CK + T
Sbjct: 339 WFSQAPRRSCPVCKQSVAAT 358
>gi|14149702 ring finger protein 167 [Homo sapiens]
Length = 350
Score = 68.6 bits (166), Expect = 7e-12
Identities = 55/232 (23%), Positives = 98/232 (42%), Gaps = 26/232 (11%)
Query: 77 LPEGWNQNACHPLTNFS-RPKQADSWLALIERGGCTFTHKINVAAEKGANGVIIYNYQGT 135
L E NAC P+ P ++AL+ R C F K+ A + G +++N
Sbjct: 58 LVEAHPDNACSPIAPPPPAPVNGSVFIALLRRFDCNFDLKVLNAQKAGYGAAVVHNVNS- 116
Query: 136 GSKVFPMSHQGTENIVAVMISNL----KGMEILHSI---QKGVYVTVIIEVGRMHMQWVS 188
+++ M E + I ++ + E L ++ +KG V ++ + ++
Sbjct: 117 -NELLNMVWNSEEIQQQIWIPSVFIGERSSEYLRALFVYEKGARVLLVPDNTFPLGYYLI 175
Query: 189 HYIMYLFTFLAATIAYFYLDCVWRLTPRVPNSFTRRRSQIKTDVKKAIDQLQLRVLKEGD 248
+ + + A A C+ R+R Q K+ + Q+ ++GD
Sbjct: 176 PFTGIVGLLVLAMGAVMIARCIQH----------RKRLQRNRLTKEQLKQIPTHDYQKGD 225
Query: 249 EELDLNEDNCVVCFDTYKPQDVVRILTCKHFFHKACIDPWLL-AHRTCPMCK 299
+ D C +C D Y+ D +R+L C H +H C+DPWL +TCP+CK
Sbjct: 226 QY-----DVCAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQTRKTCPICK 272
>gi|63025220 ring finger protein 215 [Homo sapiens]
Length = 377
Score = 64.7 bits (156), Expect = 1e-10
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 252 DLNEDNCVVCFDTYKPQDVVRILTCKHFFHKACIDPWLLAHRTCPMCKCDIL 303
D + C VC D + + +R+L CKH FH+ C+DPWL+ +TCP+CK ++L
Sbjct: 319 DPGAETCAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWLMLQQTCPLCKFNVL 370
>gi|7662486 ring finger protein 44 [Homo sapiens]
Length = 432
Score = 63.5 bits (153), Expect = 2e-10
Identities = 22/44 (50%), Positives = 32/44 (72%)
Query: 258 CVVCFDTYKPQDVVRILTCKHFFHKACIDPWLLAHRTCPMCKCD 301
CVVCF ++ + ++R+L C H FH C+D WL A+RTCP+C+ D
Sbjct: 380 CVVCFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICRAD 423
>gi|150378447 zinc and ring finger 3 [Homo sapiens]
Length = 836
Score = 63.2 bits (152), Expect = 3e-10
Identities = 51/211 (24%), Positives = 98/211 (46%), Gaps = 26/211 (12%)
Query: 111 TFTHKINVAAEKGANGVIIYNYQGTGSKVFPMSHQGTENIVAVMISNLKG---MEILHSI 167
T K A ++GA VI + + +QG+E+ + + +KG +++++ +
Sbjct: 38 TVLGKAKRAVQRGATAVIFDVSENP--EAIDQLNQGSEDPLKRPVVYVKGADAIKLMNIV 95
Query: 168 QKGVYVTVIIEVGRMHMQWVSHYIMYLFTFLAATIAYFYLDCVWRLTPRVPNSFTRRRSQ 227
K I+ R Q ++ M +F +A+F + + L V +RRSQ
Sbjct: 96 NKQKVARARIQ-HRPPRQPTEYFDMGIF------LAFFVVVSLVCLILLVKIKLKQRRSQ 148
Query: 228 IKTD--VKKAIDQLQLRVL-------KEG-----DEELDLNEDNCVVCFDTYKPQDVVRI 273
+ +A+++++ R +EG D + +C +C + Y + +R+
Sbjct: 149 NSMNRLAVQALEKMETRKFNSKSKGRREGSCGALDTLSSSSTSDCAICLEKYIDGEELRV 208
Query: 274 LTCKHFFHKACIDPWLLAHRTCPMCKCDILK 304
+ C H FH+ C+DPWLL H TCP C+ +I++
Sbjct: 209 IPCTHRFHRKCVDPWLLQHHTCPHCRHNIIE 239
>gi|197245452 ring finger protein 24 isoform 2 [Homo sapiens]
Length = 169
Score = 62.8 bits (151), Expect = 4e-10
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 243 VLKEGDEELDLNEDNCVVCFDTYKPQDVVRILTCKHFFHKACIDPWLLAHRTCPMCKCDI 302
+LKE +EL+L+E C VC + +KP+D + I CKH FH+ C+ WL + CP+C +
Sbjct: 85 ILKEKVKELNLHE-LCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPV 143
Query: 303 LK 304
L+
Sbjct: 144 LQ 145
>gi|197245450 ring finger protein 24 isoform 1 [Homo sapiens]
Length = 148
Score = 62.8 bits (151), Expect = 4e-10
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 243 VLKEGDEELDLNEDNCVVCFDTYKPQDVVRILTCKHFFHKACIDPWLLAHRTCPMCKCDI 302
+LKE +EL+L+E C VC + +KP+D + I CKH FH+ C+ WL + CP+C +
Sbjct: 64 ILKEKVKELNLHE-LCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPV 122
Query: 303 LK 304
L+
Sbjct: 123 LQ 124
>gi|6857791 ring finger protein 24 isoform 1 [Homo sapiens]
Length = 148
Score = 62.8 bits (151), Expect = 4e-10
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 243 VLKEGDEELDLNEDNCVVCFDTYKPQDVVRILTCKHFFHKACIDPWLLAHRTCPMCKCDI 302
+LKE +EL+L+E C VC + +KP+D + I CKH FH+ C+ WL + CP+C +
Sbjct: 64 ILKEKVKELNLHE-LCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPV 122
Query: 303 LK 304
L+
Sbjct: 123 LQ 124
>gi|37577185 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 60.1 bits (144), Expect = 2e-09
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 258 CVVCFDTYKPQDVVRILTCKHFFHKACIDPWLLAHRTCPMCKCD 301
CVVC ++ + ++R+L C H FH C+D WL A+RTCP+C+ D
Sbjct: 380 CVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRAD 423
>gi|37577181 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 60.1 bits (144), Expect = 2e-09
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 258 CVVCFDTYKPQDVVRILTCKHFFHKACIDPWLLAHRTCPMCKCD 301
CVVC ++ + ++R+L C H FH C+D WL A+RTCP+C+ D
Sbjct: 380 CVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRAD 423
>gi|37577179 ring finger protein 38 isoform 3 [Homo sapiens]
Length = 465
Score = 60.1 bits (144), Expect = 2e-09
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 258 CVVCFDTYKPQDVVRILTCKHFFHKACIDPWLLAHRTCPMCKCD 301
CVVC ++ + ++R+L C H FH C+D WL A+RTCP+C+ D
Sbjct: 413 CVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRAD 456
>gi|37577177 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 60.1 bits (144), Expect = 2e-09
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 258 CVVCFDTYKPQDVVRILTCKHFFHKACIDPWLLAHRTCPMCKCD 301
CVVC ++ + ++R+L C H FH C+D WL A+RTCP+C+ D
Sbjct: 380 CVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRAD 423
>gi|37577175 ring finger protein 38 isoform 1 [Homo sapiens]
Length = 515
Score = 60.1 bits (144), Expect = 2e-09
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 258 CVVCFDTYKPQDVVRILTCKHFFHKACIDPWLLAHRTCPMCKCD 301
CVVC ++ + ++R+L C H FH C+D WL A+RTCP+C+ D
Sbjct: 463 CVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRAD 506
>gi|56711322 ring finger protein 43 [Homo sapiens]
Length = 783
Score = 58.9 bits (141), Expect = 5e-09
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 258 CVVCFDTYKPQDVVRILTCKHFFHKACIDPWLLAHRTCPMCKCDI 302
C +C + + +R+++C H FH+ C+DPWL HRTCP+C +I
Sbjct: 272 CAICLEEFSEGQELRVISCLHEFHRNCVDPWLHQHRTCPLCMFNI 316
>gi|33859668 Rabring 7 [Homo sapiens]
Length = 304
Score = 58.9 bits (141), Expect = 5e-09
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 249 EELDLNEDNCVVCFDTYKPQDVVRILTCKHFFHKACIDPWLLAHRTCPMCK 299
E++D+ + C VC + Y ++ VR L C HFFH +CI PWL H TCP+C+
Sbjct: 220 EQVDMGLE-CPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELHDTCPVCR 269
>gi|37595553 ring finger protein 111 [Homo sapiens]
Length = 986
Score = 58.5 bits (140), Expect = 7e-09
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 245 KEGDEELDLNEDNCVVCFDTYKPQDVVRILTCKHFFHKACIDPWLLAHRTCPMCKCDI 302
+EG EE E+ C +C + + VR L C H FH+ C+D WL+ ++ CP+C+ DI
Sbjct: 923 EEGTEED--TEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 978
>gi|239749332 PREDICTED: hypothetical protein XP_002347002 [Homo
sapiens]
Length = 183
Score = 57.0 bits (136), Expect = 2e-08
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 227 QIKTDVKKAIDQ-LQLRVLKEGDEELDLNEDNCVVCFDTYKPQDVVRILTCKHFFHKACI 285
Q++T + ++ Q L V G ++ + CV+C + D +R L CKHFFH CI
Sbjct: 56 QVRTAQRLSLLQCLPEEVYDPGRDKSEEEMPECVICLLEFVCGDPIRCLPCKHFFHLDCI 115
Query: 286 DPWLLAHRTCPMCK 299
D WLL TCP C+
Sbjct: 116 DTWLLRSFTCPYCR 129
>gi|239743424 PREDICTED: hypothetical protein XP_002342853 [Homo
sapiens]
Length = 183
Score = 57.0 bits (136), Expect = 2e-08
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 227 QIKTDVKKAIDQ-LQLRVLKEGDEELDLNEDNCVVCFDTYKPQDVVRILTCKHFFHKACI 285
Q++T + ++ Q L V G ++ + CV+C + D +R L CKHFFH CI
Sbjct: 56 QVRTAQRLSLLQCLPEEVYDPGRDKSEEEMPECVICLLEFVCGDPIRCLPCKHFFHLDCI 115
Query: 286 DPWLLAHRTCPMCK 299
D WLL TCP C+
Sbjct: 116 DTWLLRSFTCPYCR 129
>gi|21071001 autocrine motility factor receptor [Homo sapiens]
Length = 643
Score = 55.8 bits (133), Expect = 5e-08
Identities = 35/138 (25%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 169 KGVYV---TVIIEVGRMHMQWVSHYIMYLFTFLAATIAYFYLDCVWR-LTPRVPNSFTRR 224
KG YV ++E+ + + + H M LF + ++A + R L V R
Sbjct: 253 KGTYVYYTDFVMELTLLSLDLMHHIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRIRRH 312
Query: 225 RSQIKTDVKKAIDQLQLRVLKEGDEELDLNEDNCVVCFDTYKPQDVVRILTCKHFFHKAC 284
++ ++ + ++ R EEL +N D+C +C+D+ + R L C H FH +C
Sbjct: 313 KNYLRV-----VGNMEARFAVATPEELAVNNDDCAICWDSMQ---AARKLPCGHLFHNSC 364
Query: 285 IDPWLLAHRTCPMCKCDI 302
+ WL +CP C+ +
Sbjct: 365 LRSWLEQDTSCPTCRMSL 382
>gi|57165361 ring finger protein 165 [Homo sapiens]
Length = 346
Score = 55.8 bits (133), Expect = 5e-08
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 245 KEGDEELDLNEDNCVVCFDTYKPQDVVRILTCKHFFHKACIDPWLLAHRTCPMCKCDI 302
K+ EE D +E C +C + + VR L C H FH+ C+D WL + CP+C+ DI
Sbjct: 282 KDEGEESDTDE-KCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 338
>gi|7662244 DAZ interacting protein 3, zinc finger [Homo sapiens]
Length = 1208
Score = 54.7 bits (130), Expect = 1e-07
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 249 EELDLNEDNCVVCFDTYKPQDVVRILTCKHFFHKACIDPWLLAHRTCPMCKCDIL 303
+E + E+ CV+C + P+++ +L C H FH CI PWL+ TCP C+ +L
Sbjct: 1139 DEEEEEEEPCVICHENLSPENL-SVLPCAHKFHAQCIRPWLMQQGTCPTCRLHVL 1192
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.137 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,762,162
Number of Sequences: 37866
Number of extensions: 509320
Number of successful extensions: 1708
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 75
Number of HSP's that attempted gapping in prelim test: 1593
Number of HSP's gapped (non-prelim): 168
length of query: 305
length of database: 18,247,518
effective HSP length: 102
effective length of query: 203
effective length of database: 14,385,186
effective search space: 2920192758
effective search space used: 2920192758
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.