Guide to the Human Genome
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Name: RSPRY1 Sequence: fasta or formatted (576aa) NCBI GI: 45387949
Description:

ring finger and SPRY domain containing 1

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         39           3
 C cysteine            4.0         23           2
 D aspartate           6.1         35           2
 E glutamate           6.2         36           2
 F phenylalanine       4.0         23           2
 G glycine             5.9         34           2
 H histidine           2.4         14           1
 I isoleucine          4.9         28           2
 K lysine              4.3         25           2
 L leucine            11.6         67           3
 M methionine          1.9         11           1
 N asparagine          3.6         21           1
 P proline             5.2         30           2
 Q glutamine           4.9         28           4
 R arginine            5.0         29           2
 S serine              8.2         47           2
 T threonine           5.4         31           2
 V valine              5.7         33           2
 W tryptophan          1.4          8           1
 Y tyrosine            2.4         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ring finger and SPRY domain containing 1 
RNF123                0.057   ring finger protein 123 
RYR2                  0.038   cardiac muscle ryanodine receptor 
RYR1                  0.038   skeletal muscle ryanodine receptor isoform 2 
RYR1                  0.038   skeletal muscle ryanodine receptor isoform 1 
RYR3                  0.033   ryanodine receptor 3 
MYLIP                 0.025   myosin regulatory light chain interacting protein [H...
BIRC3                 0.023   baculoviral IAP repeat-containing protein 3 
BIRC3                 0.023   baculoviral IAP repeat-containing protein 3 
DDX1                  0.022   DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 
BIRC2                 0.021   baculoviral IAP repeat-containing protein 2 
RFFL                  0.019   rififylin 
RFFL                  0.019   rififylin 
BIRC7                 0.019   livin inhibitor of apoptosis isoform beta 
BIRC7                 0.019   livin inhibitor of apoptosis isoform alpha 
LRSAM1                0.019   leucine rich repeat and sterile alpha motif containi...
LRSAM1                0.019   leucine rich repeat and sterile alpha motif containi...
LRSAM1                0.019   leucine rich repeat and sterile alpha motif containi...
RNF34                 0.017   ring finger protein 34 isoform 1 
RNF34                 0.017   ring finger protein 34 isoform 2 
NEURL1B               0.016   neuralized homolog 1B 
NEURL                 0.015   neuralized-like 
TRAF7                 0.015   TNF receptor-associated factor 7 
MIB1                  0.015   mindbomb homolog 1 
MEX3B                 0.013   mex-3 homolog B 
MGRN1                 0.013   mahogunin, ring finger 1 isoform 4 
MGRN1                 0.013   mahogunin, ring finger 1 isoform 3 
MGRN1                 0.013   mahogunin, ring finger 1 isoform 2 
MGRN1                 0.013   mahogunin, ring finger 1 isoform 1 
ASH2L                 0.013   ash2-like isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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