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Search of human proteins with 37594464
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|37594464 nudix-type motif 5 [Homo sapiens]
(219 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|37594464 nudix-type motif 5 [Homo sapiens] 446 e-126
gi|8922792 nudix-type motif 15 [Homo sapiens] 35 0.038
gi|13899267 nudix-type motif 12 [Homo sapiens] 33 0.14
gi|157502199 CUB and Sushi multiple domains 1 [Homo sapiens] 30 1.6
gi|37221177 nudix-type motif 11 [Homo sapiens] 30 1.6
gi|40317632 nudix-type motif 4 isoform alpha [Homo sapiens] 30 1.6
gi|41393549 nudix-type motif 10 [Homo sapiens] 30 2.1
gi|40317634 nudix-type motif 4 isoform beta [Homo sapiens] 30 2.1
gi|23510457 zinc finger protein 41 [Homo sapiens] 29 2.7
gi|31542498 DCP2 decapping enzyme [Homo sapiens] 29 2.7
gi|23510455 zinc finger protein 41 [Homo sapiens] 29 2.7
gi|5729804 nudix-type motif 3 [Homo sapiens] 29 3.6
gi|239746241 PREDICTED: hypothetical protein XP_002343712 [Homo ... 28 4.7
gi|40288286 nudix-type motif 1 isoform p22 [Homo sapiens] 28 6.1
gi|40288284 nudix-type motif 1 isoform p18 [Homo sapiens] 28 6.1
gi|40288282 nudix-type motif 1 isoform p22 [Homo sapiens] 28 6.1
gi|40288280 nudix-type motif 1 isoform p18 [Homo sapiens] 28 6.1
gi|40288278 nudix-type motif 1 isoform p22 [Homo sapiens] 28 6.1
gi|40288276 nudix-type motif 1 isoform p18 [Homo sapiens] 28 6.1
gi|40288274 nudix-type motif 1 isoform p18 [Homo sapiens] 28 6.1
gi|83320068 zinc finger protein 253 [Homo sapiens] 28 6.1
gi|122937400 odz, odd Oz/ten-m homolog 3 [Homo sapiens] 28 6.1
gi|239751706 PREDICTED: zinc finger protein 56 [Homo sapiens] 28 8.0
gi|239746210 PREDICTED: zinc finger protein 56 [Homo sapiens] 28 8.0
gi|170016085 zinc finger protein 630 [Homo sapiens] 28 8.0
gi|154426306 kinesin family member 24 [Homo sapiens] 28 8.0
>gi|37594464 nudix-type motif 5 [Homo sapiens]
Length = 219
Score = 446 bits (1148), Expect = e-126
Identities = 219/219 (100%), Positives = 219/219 (100%)
Query: 1 MESQEPTESSQNGKQYIISEELISEGKWVKLEKTTYMDPTGKTRTWESVKRTTRKEQTAD 60
MESQEPTESSQNGKQYIISEELISEGKWVKLEKTTYMDPTGKTRTWESVKRTTRKEQTAD
Sbjct: 1 MESQEPTESSQNGKQYIISEELISEGKWVKLEKTTYMDPTGKTRTWESVKRTTRKEQTAD 60
Query: 61 GVAVIPVLQRTLHYECIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYK 120
GVAVIPVLQRTLHYECIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYK
Sbjct: 61 GVAVIPVLQRTLHYECIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYK 120
Query: 121 GDIAECSPAVCMDPGLSNCTIHIVTVTINGDDAENARPKPKPGDGEFVEVISLPKNDLLQ 180
GDIAECSPAVCMDPGLSNCTIHIVTVTINGDDAENARPKPKPGDGEFVEVISLPKNDLLQ
Sbjct: 121 GDIAECSPAVCMDPGLSNCTIHIVTVTINGDDAENARPKPKPGDGEFVEVISLPKNDLLQ 180
Query: 181 RLDALVAEEHLTVDARVYSYALALKHANAKPFEVPFLKF 219
RLDALVAEEHLTVDARVYSYALALKHANAKPFEVPFLKF
Sbjct: 181 RLDALVAEEHLTVDARVYSYALALKHANAKPFEVPFLKF 219
>gi|8922792 nudix-type motif 15 [Homo sapiens]
Length = 164
Score = 35.4 bits (80), Expect = 0.038
Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 9/125 (7%)
Query: 61 GVAVIPVLQRTLHYECIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYK 120
GV V V+ H C++L K+ + +G + P G ++ GET E A RE EE
Sbjct: 13 GVGVGVVVTSCKHPRCVLLGKR-KGSVGAGSFQLPGGHLEFGETWEECAQRETWEEAAL- 70
Query: 121 GDIAECSPAVCMDPGLSNCTIHIVTVTINGD-----DAENARPKPKPGDG-EFVEVISLP 174
+ A ++ + H VT+ + G+ D+E +P+ + E+V LP
Sbjct: 71 -HLKNVHFASVVNSFIEKENYHYVTILMKGEVDVTHDSEPKNVEPEKNESWEWVPWEELP 129
Query: 175 KNDLL 179
D L
Sbjct: 130 PLDQL 134
>gi|13899267 nudix-type motif 12 [Homo sapiens]
Length = 462
Score = 33.5 bits (75), Expect = 0.14
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 9/86 (10%)
Query: 78 VLVKQFRPPMGGY-CIEFPAGLIDDGETPEAAALRELEEETGYK-GDI--AECSPAVCMD 133
+L +Q R P G + C+ AG I+ GET E A RE+EEE+G K G + C P
Sbjct: 338 LLGRQKRFPPGMFTCL---AGFIEPGETIEDAVRREVEEESGVKVGHVQYVACQPWPMPS 394
Query: 134 PGLSNCTIHIVTVTINGD--DAENAR 157
+ C V+ I D + E+AR
Sbjct: 395 SLMIGCLALAVSTEIKVDKNEIEDAR 420
>gi|157502199 CUB and Sushi multiple domains 1 [Homo sapiens]
Length = 3565
Score = 30.0 bits (66), Expect = 1.6
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 101 DGETPEAAALRELEEETGYKGDIAECSPAVCMDPGL 136
DG +A+ E +KG+I +C P C DPG+
Sbjct: 3126 DGYQLSHSAILSCEGRGVWKGEIPQCLPVFCGDPGI 3161
>gi|37221177 nudix-type motif 11 [Homo sapiens]
Length = 164
Score = 30.0 bits (66), Expect = 1.6
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 95 PAGLIDDGETPEAAALRELEEETGYKGDIAECSPAVCMDPGLSNCT-IHIVTVTINGDDA 153
P G ++ E P AA+RE+ EE G KG + + + T ++++TVT +D
Sbjct: 48 PGGGMEPEEEPGGAAVREVYEEAGVKGKLGRLLGVFEQNQDRKHRTYVYVLTVTELLEDW 107
Query: 154 ENA 156
E++
Sbjct: 108 EDS 110
>gi|40317632 nudix-type motif 4 isoform alpha [Homo sapiens]
Length = 180
Score = 30.0 bits (66), Expect = 1.6
Identities = 18/62 (29%), Positives = 30/62 (48%)
Query: 95 PAGLIDDGETPEAAALRELEEETGYKGDIAECSPAVCMDPGLSNCTIHIVTVTINGDDAE 154
P G ++ E P AA+RE+ EE G KG + ++++TVT +D E
Sbjct: 49 PGGGMEPEEEPGGAAVREVYEEAGVKGKLGRLLGIFENQDRKHRTYVYVLTVTEILEDWE 108
Query: 155 NA 156
++
Sbjct: 109 DS 110
>gi|41393549 nudix-type motif 10 [Homo sapiens]
Length = 164
Score = 29.6 bits (65), Expect = 2.1
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 95 PAGLIDDGETPEAAALRELEEETGYKGDIAECSPAVCMDPGLSNCT-IHIVTVTINGDDA 153
P G ++ E P AA+RE+ EE G KG + + + T ++++TVT +D
Sbjct: 48 PGGGMEPEEEPGGAAVREVYEEAGVKGKLGRLLGVFEQNQDPKHRTYVYVLTVTELLEDW 107
Query: 154 ENA 156
E++
Sbjct: 108 EDS 110
>gi|40317634 nudix-type motif 4 isoform beta [Homo sapiens]
Length = 181
Score = 29.6 bits (65), Expect = 2.1
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 95 PAGLIDDGETPEAAALRELEEETGYKGDIAECSPAVCMDPGLSNCT-IHIVTVTINGDDA 153
P G ++ E P AA+RE+ EE G KG + + + T ++++TVT +D
Sbjct: 49 PGGGMEPEEEPGGAAVREVYEEAGVKGKLGRLLGIFEQNQDRKHRTYVYVLTVTEILEDW 108
Query: 154 ENA 156
E++
Sbjct: 109 EDS 111
>gi|23510457 zinc finger protein 41 [Homo sapiens]
Length = 779
Score = 29.3 bits (64), Expect = 2.7
Identities = 22/80 (27%), Positives = 31/80 (38%), Gaps = 11/80 (13%)
Query: 4 QEPTESSQNGKQYIISEELISEGKWVKLEKTTYMDPTGKTRTWESVKRTTRKEQTADGVA 63
++P ++ GK + LI+ K EK GKT TW+S +K T +
Sbjct: 660 EKPNICAECGKAFTDRSNLITHQKIHTREKPYECGDCGKTFTWKSRLNIHQKSHTGE--- 716
Query: 64 VIPVLQRTLHYECIVLVKQF 83
HYEC K F
Sbjct: 717 --------RHYECSKCGKAF 728
>gi|31542498 DCP2 decapping enzyme [Homo sapiens]
Length = 420
Score = 29.3 bits (64), Expect = 2.7
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Query: 67 VLQRTLHYECIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGY 119
+L TL E ++LV+ + G FP G ++ E P A RE+ EETG+
Sbjct: 104 ILDETL--ENVLLVQGYLAKSGW---GFPKGKVNKEEAPHDCAAREVFEETGF 151
>gi|23510455 zinc finger protein 41 [Homo sapiens]
Length = 779
Score = 29.3 bits (64), Expect = 2.7
Identities = 22/80 (27%), Positives = 31/80 (38%), Gaps = 11/80 (13%)
Query: 4 QEPTESSQNGKQYIISEELISEGKWVKLEKTTYMDPTGKTRTWESVKRTTRKEQTADGVA 63
++P ++ GK + LI+ K EK GKT TW+S +K T +
Sbjct: 660 EKPNICAECGKAFTDRSNLITHQKIHTREKPYECGDCGKTFTWKSRLNIHQKSHTGE--- 716
Query: 64 VIPVLQRTLHYECIVLVKQF 83
HYEC K F
Sbjct: 717 --------RHYECSKCGKAF 728
>gi|5729804 nudix-type motif 3 [Homo sapiens]
Length = 172
Score = 28.9 bits (63), Expect = 3.6
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 95 PAGLIDDGETPEAAALRELEEETGYKGDI 123
P G ++ E P AA+RE+ EE G KG +
Sbjct: 49 PGGGMEPEEEPSVAAVREVCEEAGVKGTL 77
>gi|239746241 PREDICTED: hypothetical protein XP_002343712 [Homo
sapiens]
Length = 461
Score = 28.5 bits (62), Expect = 4.7
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 70 RTLHYECIVL----VKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYKG 121
R+LH EC++ Q PP G + PA + + G +P + +L G KG
Sbjct: 42 RSLHSECLLYGNRDFNQPWPPSPGRRLNRPAAVREPGPSPSSGLAEKLGAVAGKKG 97
>gi|40288286 nudix-type motif 1 isoform p22 [Homo sapiens]
Length = 179
Score = 28.1 bits (61), Expect = 6.1
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 97 GLIDDGETPEAAALRELEEETGYKGD 122
G + +GET E A REL+EE+G D
Sbjct: 60 GKVQEGETIEDGARRELQEESGLTVD 85
>gi|40288284 nudix-type motif 1 isoform p18 [Homo sapiens]
Length = 156
Score = 28.1 bits (61), Expect = 6.1
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 97 GLIDDGETPEAAALRELEEETGYKGD 122
G + +GET E A REL+EE+G D
Sbjct: 37 GKVQEGETIEDGARRELQEESGLTVD 62
>gi|40288282 nudix-type motif 1 isoform p22 [Homo sapiens]
Length = 179
Score = 28.1 bits (61), Expect = 6.1
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 97 GLIDDGETPEAAALRELEEETGYKGD 122
G + +GET E A REL+EE+G D
Sbjct: 60 GKVQEGETIEDGARRELQEESGLTVD 85
>gi|40288280 nudix-type motif 1 isoform p18 [Homo sapiens]
Length = 156
Score = 28.1 bits (61), Expect = 6.1
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 97 GLIDDGETPEAAALRELEEETGYKGD 122
G + +GET E A REL+EE+G D
Sbjct: 37 GKVQEGETIEDGARRELQEESGLTVD 62
>gi|40288278 nudix-type motif 1 isoform p22 [Homo sapiens]
Length = 179
Score = 28.1 bits (61), Expect = 6.1
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 97 GLIDDGETPEAAALRELEEETGYKGD 122
G + +GET E A REL+EE+G D
Sbjct: 60 GKVQEGETIEDGARRELQEESGLTVD 85
>gi|40288276 nudix-type motif 1 isoform p18 [Homo sapiens]
Length = 156
Score = 28.1 bits (61), Expect = 6.1
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 97 GLIDDGETPEAAALRELEEETGYKGD 122
G + +GET E A REL+EE+G D
Sbjct: 37 GKVQEGETIEDGARRELQEESGLTVD 62
>gi|40288274 nudix-type motif 1 isoform p18 [Homo sapiens]
Length = 156
Score = 28.1 bits (61), Expect = 6.1
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 97 GLIDDGETPEAAALRELEEETGYKGD 122
G + +GET E A REL+EE+G D
Sbjct: 37 GKVQEGETIEDGARRELQEESGLTVD 62
>gi|83320068 zinc finger protein 253 [Homo sapiens]
Length = 499
Score = 28.1 bits (61), Expect = 6.1
Identities = 17/57 (29%), Positives = 25/57 (43%)
Query: 4 QEPTESSQNGKQYIISEELISEGKWVKLEKTTYMDPTGKTRTWESVKRTTRKEQTAD 60
++P + GK + S L S K EK D GKT TW S+ ++ T +
Sbjct: 365 EKPYRCRECGKAFNHSTTLFSHEKIHTGEKPYKCDECGKTFTWPSILSKHKRTHTGE 421
>gi|122937400 odz, odd Oz/ten-m homolog 3 [Homo sapiens]
Length = 2699
Score = 28.1 bits (61), Expect = 6.1
Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
Query: 117 TGYKGDIAECSPAVCMDPGLSN 138
+GYKG+ C A C+DPG SN
Sbjct: 602 SGYKGE--SCEEADCIDPGCSN 621
>gi|239751706 PREDICTED: zinc finger protein 56 [Homo sapiens]
Length = 561
Score = 27.7 bits (60), Expect = 8.0
Identities = 18/57 (31%), Positives = 25/57 (43%)
Query: 4 QEPTESSQNGKQYIISEELISEGKWVKLEKTTYMDPTGKTRTWESVKRTTRKEQTAD 60
++P + GK + S L S K EK D GKT TW S+ R+ T +
Sbjct: 351 EKPYRCKECGKAFNHSTILFSHKKIHTGEKFYKCDECGKTFTWPSLLSKHRRTHTGE 407
>gi|239746210 PREDICTED: zinc finger protein 56 [Homo sapiens]
Length = 561
Score = 27.7 bits (60), Expect = 8.0
Identities = 18/57 (31%), Positives = 25/57 (43%)
Query: 4 QEPTESSQNGKQYIISEELISEGKWVKLEKTTYMDPTGKTRTWESVKRTTRKEQTAD 60
++P + GK + S L S K EK D GKT TW S+ R+ T +
Sbjct: 351 EKPYRCKECGKAFNHSTILFSHKKIHTGEKFYKCDECGKTFTWPSLLSKHRRTHTGE 407
>gi|170016085 zinc finger protein 630 [Homo sapiens]
Length = 657
Score = 27.7 bits (60), Expect = 8.0
Identities = 17/57 (29%), Positives = 26/57 (45%)
Query: 4 QEPTESSQNGKQYIISEELISEGKWVKLEKTTYMDPTGKTRTWESVKRTTRKEQTAD 60
++P E S+ GK + LI K EKT +G T W+S T ++ T +
Sbjct: 568 EKPYECSECGKAFCGKSPLIIHQKTHPREKTPECAESGMTFFWKSQMITYQRRHTGE 624
>gi|154426306 kinesin family member 24 [Homo sapiens]
Length = 1368
Score = 27.7 bits (60), Expect = 8.0
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 66 PVLQRTLHYECIVL-VKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEE 115
P+LQ+ L Y+ + ++Q+RPP G E P E + A + EL++
Sbjct: 775 PLLQQKLKYQPLKRSLRQYRPPEGQLTNETPPLFHSYSENHDGAQVEELDD 825
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.133 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,582,450
Number of Sequences: 37866
Number of extensions: 461415
Number of successful extensions: 806
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 785
Number of HSP's gapped (non-prelim): 27
length of query: 219
length of database: 18,247,518
effective HSP length: 98
effective length of query: 121
effective length of database: 14,536,650
effective search space: 1758934650
effective search space used: 1758934650
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.