Guide to the Human Genome
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Name: ZNF56 Sequence: fasta or formatted (561aa) NCBI GI: 239751706
Description:

PREDICTED: zinc finger protein 56

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt mRNA [561aa] PREDICTED: zinc finger protein 56
alt prot [592aa] PREDICTED: zinc finger protein 56
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.2         18           1
 C cysteine            5.5         31           1
 D aspartate           2.5         14           1
 E glutamate           8.0         45           2
 F phenylalanine       5.0         28           2
 G glycine             6.1         34           2
 H histidine           7.0         39           2
 I isoleucine          4.8         27           2
 K lysine             13.7         77           3
 L leucine             7.1         40           2
 M methionine          1.2          7           1
 N asparagine          3.9         22           2
 P proline             3.6         20           2
 Q glutamine           2.5         14           1
 R arginine            3.6         20           2
 S serine              6.6         37           3
 T threonine           7.5         42           3
 V valine              2.7         15           1
 W tryptophan          1.1          6           1
 X unknown             0.4          2           1
 Y tyrosine            4.1         23           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: zinc finger protein 56 
ZNF56                 1.000   PREDICTED: zinc finger protein 56 
ZNF56                 0.985   PREDICTED: zinc finger protein 56 
ZNF66                 0.608   PREDICTED: zinc finger protein 66 
ZNF66                 0.608   PREDICTED: zinc finger protein 66 
ZNF66                 0.608   PREDICTED: zinc finger protein 66 
ZNF737                0.597   zinc finger protein 737 
ZNF737                0.597   PREDICTED: zinc finger protein 737 
ZNF737                0.597   PREDICTED: zinc finger protein 737 
ZNF737                0.597   PREDICTED: zinc finger protein 737 
ZNF93                 0.592   zinc finger protein 93 
ZNF85                 0.583   zinc finger protein 85 
ZNF253                0.577   zinc finger protein 253 
ZNF708                0.569   zinc finger protein 708 
ZNF90                 0.567   zinc finger protein 90 
ZNF92                 0.565   zinc finger protein 92 isoform 2 
ZNF98                 0.561   zinc finger protein 98 
ZNF626                0.560   zinc finger protein 626 isoform 1 
ZNF254                0.556   zinc finger protein 254 
ZNF430                0.554   zinc finger protein 430 
ZNF728                0.552   PREDICTED: zinc finger protein 728 
ZNF728                0.550   PREDICTED: zinc finger protein 728 
ZNF728                0.550   PREDICTED: zinc finger protein 728 
ZNF431                0.550   zinc finger protein 431 
ZNF726                0.550   PREDICTED: zinc finger protein 726 
ZNF726                0.550   PREDICTED: zinc finger protein 726 
ZNF726                0.550   PREDICTED: zinc finger protein 726 
ZNF257                0.547   zinc finger protein 257 
ZNF208                0.546   zinc finger protein 208 
ZNF429                0.542   zinc finger protein 429 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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