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Search of human proteins with 37577179
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|37577179 ring finger protein 38 isoform 3 [Homo sapiens]
(465 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|37577179 ring finger protein 38 isoform 3 [Homo sapiens] 993 0.0
gi|37577175 ring finger protein 38 isoform 1 [Homo sapiens] 984 0.0
gi|37577185 ring finger protein 38 isoform 2 [Homo sapiens] 925 0.0
gi|37577181 ring finger protein 38 isoform 2 [Homo sapiens] 925 0.0
gi|37577177 ring finger protein 38 isoform 2 [Homo sapiens] 925 0.0
gi|7662486 ring finger protein 44 [Homo sapiens] 533 e-151
gi|5174653 ring finger protein 6 [Homo sapiens] 75 1e-13
gi|34305295 ring finger protein 6 [Homo sapiens] 75 1e-13
gi|34305293 ring finger protein 6 [Homo sapiens] 75 1e-13
gi|37595553 ring finger protein 111 [Homo sapiens] 75 2e-13
gi|34452686 ring finger protein, LIM domain interacting [Homo sa... 74 4e-13
gi|34452684 ring finger protein, LIM domain interacting [Homo sa... 74 4e-13
gi|34577087 ring finger protein 13 [Homo sapiens] 70 5e-12
gi|6005864 ring finger protein 13 [Homo sapiens] 70 5e-12
gi|14149702 ring finger protein 167 [Homo sapiens] 67 4e-11
gi|7657520 ring finger protein 11 [Homo sapiens] 64 4e-10
gi|58331204 ring finger protein 150 [Homo sapiens] 64 4e-10
gi|57165361 ring finger protein 165 [Homo sapiens] 62 8e-10
gi|63025220 ring finger protein 215 [Homo sapiens] 62 8e-10
gi|29789407 ring finger protein 149 [Homo sapiens] 62 1e-09
gi|56711322 ring finger protein 43 [Homo sapiens] 62 1e-09
gi|37622894 ring finger protein 126 [Homo sapiens] 62 1e-09
gi|239749332 PREDICTED: hypothetical protein XP_002347002 [Homo ... 61 2e-09
gi|239743424 PREDICTED: hypothetical protein XP_002342853 [Homo ... 61 2e-09
gi|37675277 ring finger protein 148 [Homo sapiens] 60 4e-09
gi|37588873 ring finger protein 128 isoform 1 [Homo sapiens] 59 9e-09
gi|37588871 ring finger protein 128 isoform 2 [Homo sapiens] 59 9e-09
gi|197245452 ring finger protein 24 isoform 2 [Homo sapiens] 59 1e-08
gi|197245450 ring finger protein 24 isoform 1 [Homo sapiens] 59 1e-08
gi|6857791 ring finger protein 24 isoform 1 [Homo sapiens] 59 1e-08
>gi|37577179 ring finger protein 38 isoform 3 [Homo sapiens]
Length = 465
Score = 993 bits (2567), Expect = 0.0
Identities = 465/465 (100%), Positives = 465/465 (100%)
Query: 1 MACKSEDSPSPKRQRLSHSVFDYTSASPAPSPPMRPWEMTSNRQPPSVRPSQHHFSGERC 60
MACKSEDSPSPKRQRLSHSVFDYTSASPAPSPPMRPWEMTSNRQPPSVRPSQHHFSGERC
Sbjct: 1 MACKSEDSPSPKRQRLSHSVFDYTSASPAPSPPMRPWEMTSNRQPPSVRPSQHHFSGERC 60
Query: 61 NTPARNRRSPPVRRQRGRRDRLSRHNSISQDENYHHLPYAQQQAIEEPRAFHPPNVSPRL 120
NTPARNRRSPPVRRQRGRRDRLSRHNSISQDENYHHLPYAQQQAIEEPRAFHPPNVSPRL
Sbjct: 61 NTPARNRRSPPVRRQRGRRDRLSRHNSISQDENYHHLPYAQQQAIEEPRAFHPPNVSPRL 120
Query: 121 LHPAAHPPQQNAVMVDIHDQLHQGTVPVSYTVTTVAPHGIPLCTGQHIPACSTQQVPGCS 180
LHPAAHPPQQNAVMVDIHDQLHQGTVPVSYTVTTVAPHGIPLCTGQHIPACSTQQVPGCS
Sbjct: 121 LHPAAHPPQQNAVMVDIHDQLHQGTVPVSYTVTTVAPHGIPLCTGQHIPACSTQQVPGCS 180
Query: 181 VVFSGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLISSDPFLIHPPHLSPHHPPHLPPP 240
VVFSGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLISSDPFLIHPPHLSPHHPPHLPPP
Sbjct: 181 VVFSGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLISSDPFLIHPPHLSPHHPPHLPPP 240
Query: 241 GQFVPFQTQQSRSPLQRIENEVELLGEHLPVGGFTYPPSAHPPTLPPSAPLQFLTHDPLH 300
GQFVPFQTQQSRSPLQRIENEVELLGEHLPVGGFTYPPSAHPPTLPPSAPLQFLTHDPLH
Sbjct: 241 GQFVPFQTQQSRSPLQRIENEVELLGEHLPVGGFTYPPSAHPPTLPPSAPLQFLTHDPLH 300
Query: 301 QEVSFGVPYPPFMPRRLTGRSRYRSQQPIPPPPYHPSLLPYVLSMLPVPPAVGPTFSFEL 360
QEVSFGVPYPPFMPRRLTGRSRYRSQQPIPPPPYHPSLLPYVLSMLPVPPAVGPTFSFEL
Sbjct: 301 QEVSFGVPYPPFMPRRLTGRSRYRSQQPIPPPPYHPSLLPYVLSMLPVPPAVGPTFSFEL 360
Query: 361 DVEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDF 420
DVEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDF
Sbjct: 361 DVEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDF 420
Query: 421 ESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVHRDSE 465
ESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVHRDSE
Sbjct: 421 ESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVHRDSE 465
>gi|37577175 ring finger protein 38 isoform 1 [Homo sapiens]
Length = 515
Score = 984 bits (2545), Expect = 0.0
Identities = 461/462 (99%), Positives = 462/462 (100%)
Query: 4 KSEDSPSPKRQRLSHSVFDYTSASPAPSPPMRPWEMTSNRQPPSVRPSQHHFSGERCNTP 63
+SEDSPSPKRQRLSHSVFDYTSASPAPSPPMRPWEMTSNRQPPSVRPSQHHFSGERCNTP
Sbjct: 54 QSEDSPSPKRQRLSHSVFDYTSASPAPSPPMRPWEMTSNRQPPSVRPSQHHFSGERCNTP 113
Query: 64 ARNRRSPPVRRQRGRRDRLSRHNSISQDENYHHLPYAQQQAIEEPRAFHPPNVSPRLLHP 123
ARNRRSPPVRRQRGRRDRLSRHNSISQDENYHHLPYAQQQAIEEPRAFHPPNVSPRLLHP
Sbjct: 114 ARNRRSPPVRRQRGRRDRLSRHNSISQDENYHHLPYAQQQAIEEPRAFHPPNVSPRLLHP 173
Query: 124 AAHPPQQNAVMVDIHDQLHQGTVPVSYTVTTVAPHGIPLCTGQHIPACSTQQVPGCSVVF 183
AAHPPQQNAVMVDIHDQLHQGTVPVSYTVTTVAPHGIPLCTGQHIPACSTQQVPGCSVVF
Sbjct: 174 AAHPPQQNAVMVDIHDQLHQGTVPVSYTVTTVAPHGIPLCTGQHIPACSTQQVPGCSVVF 233
Query: 184 SGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLISSDPFLIHPPHLSPHHPPHLPPPGQF 243
SGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLISSDPFLIHPPHLSPHHPPHLPPPGQF
Sbjct: 234 SGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLISSDPFLIHPPHLSPHHPPHLPPPGQF 293
Query: 244 VPFQTQQSRSPLQRIENEVELLGEHLPVGGFTYPPSAHPPTLPPSAPLQFLTHDPLHQEV 303
VPFQTQQSRSPLQRIENEVELLGEHLPVGGFTYPPSAHPPTLPPSAPLQFLTHDPLHQEV
Sbjct: 294 VPFQTQQSRSPLQRIENEVELLGEHLPVGGFTYPPSAHPPTLPPSAPLQFLTHDPLHQEV 353
Query: 304 SFGVPYPPFMPRRLTGRSRYRSQQPIPPPPYHPSLLPYVLSMLPVPPAVGPTFSFELDVE 363
SFGVPYPPFMPRRLTGRSRYRSQQPIPPPPYHPSLLPYVLSMLPVPPAVGPTFSFELDVE
Sbjct: 354 SFGVPYPPFMPRRLTGRSRYRSQQPIPPPPYHPSLLPYVLSMLPVPPAVGPTFSFELDVE 413
Query: 364 DGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESR 423
DGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESR
Sbjct: 414 DGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESR 473
Query: 424 QLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVHRDSE 465
QLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVHRDSE
Sbjct: 474 QLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVHRDSE 515
>gi|37577185 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 925 bits (2391), Expect = 0.0
Identities = 432/432 (100%), Positives = 432/432 (100%)
Query: 34 MRPWEMTSNRQPPSVRPSQHHFSGERCNTPARNRRSPPVRRQRGRRDRLSRHNSISQDEN 93
MRPWEMTSNRQPPSVRPSQHHFSGERCNTPARNRRSPPVRRQRGRRDRLSRHNSISQDEN
Sbjct: 1 MRPWEMTSNRQPPSVRPSQHHFSGERCNTPARNRRSPPVRRQRGRRDRLSRHNSISQDEN 60
Query: 94 YHHLPYAQQQAIEEPRAFHPPNVSPRLLHPAAHPPQQNAVMVDIHDQLHQGTVPVSYTVT 153
YHHLPYAQQQAIEEPRAFHPPNVSPRLLHPAAHPPQQNAVMVDIHDQLHQGTVPVSYTVT
Sbjct: 61 YHHLPYAQQQAIEEPRAFHPPNVSPRLLHPAAHPPQQNAVMVDIHDQLHQGTVPVSYTVT 120
Query: 154 TVAPHGIPLCTGQHIPACSTQQVPGCSVVFSGQHLPVCSVPPPMLQACSVQHLPVPYAAF 213
TVAPHGIPLCTGQHIPACSTQQVPGCSVVFSGQHLPVCSVPPPMLQACSVQHLPVPYAAF
Sbjct: 121 TVAPHGIPLCTGQHIPACSTQQVPGCSVVFSGQHLPVCSVPPPMLQACSVQHLPVPYAAF 180
Query: 214 PPLISSDPFLIHPPHLSPHHPPHLPPPGQFVPFQTQQSRSPLQRIENEVELLGEHLPVGG 273
PPLISSDPFLIHPPHLSPHHPPHLPPPGQFVPFQTQQSRSPLQRIENEVELLGEHLPVGG
Sbjct: 181 PPLISSDPFLIHPPHLSPHHPPHLPPPGQFVPFQTQQSRSPLQRIENEVELLGEHLPVGG 240
Query: 274 FTYPPSAHPPTLPPSAPLQFLTHDPLHQEVSFGVPYPPFMPRRLTGRSRYRSQQPIPPPP 333
FTYPPSAHPPTLPPSAPLQFLTHDPLHQEVSFGVPYPPFMPRRLTGRSRYRSQQPIPPPP
Sbjct: 241 FTYPPSAHPPTLPPSAPLQFLTHDPLHQEVSFGVPYPPFMPRRLTGRSRYRSQQPIPPPP 300
Query: 334 YHPSLLPYVLSMLPVPPAVGPTFSFELDVEDGEVENYEALLNLAERLGEAKPRGLTKADI 393
YHPSLLPYVLSMLPVPPAVGPTFSFELDVEDGEVENYEALLNLAERLGEAKPRGLTKADI
Sbjct: 301 YHPSLLPYVLSMLPVPPAVGPTFSFELDVEDGEVENYEALLNLAERLGEAKPRGLTKADI 360
Query: 394 EQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPIC 453
EQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPIC
Sbjct: 361 EQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPIC 420
Query: 454 RADASEVHRDSE 465
RADASEVHRDSE
Sbjct: 421 RADASEVHRDSE 432
>gi|37577181 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 925 bits (2391), Expect = 0.0
Identities = 432/432 (100%), Positives = 432/432 (100%)
Query: 34 MRPWEMTSNRQPPSVRPSQHHFSGERCNTPARNRRSPPVRRQRGRRDRLSRHNSISQDEN 93
MRPWEMTSNRQPPSVRPSQHHFSGERCNTPARNRRSPPVRRQRGRRDRLSRHNSISQDEN
Sbjct: 1 MRPWEMTSNRQPPSVRPSQHHFSGERCNTPARNRRSPPVRRQRGRRDRLSRHNSISQDEN 60
Query: 94 YHHLPYAQQQAIEEPRAFHPPNVSPRLLHPAAHPPQQNAVMVDIHDQLHQGTVPVSYTVT 153
YHHLPYAQQQAIEEPRAFHPPNVSPRLLHPAAHPPQQNAVMVDIHDQLHQGTVPVSYTVT
Sbjct: 61 YHHLPYAQQQAIEEPRAFHPPNVSPRLLHPAAHPPQQNAVMVDIHDQLHQGTVPVSYTVT 120
Query: 154 TVAPHGIPLCTGQHIPACSTQQVPGCSVVFSGQHLPVCSVPPPMLQACSVQHLPVPYAAF 213
TVAPHGIPLCTGQHIPACSTQQVPGCSVVFSGQHLPVCSVPPPMLQACSVQHLPVPYAAF
Sbjct: 121 TVAPHGIPLCTGQHIPACSTQQVPGCSVVFSGQHLPVCSVPPPMLQACSVQHLPVPYAAF 180
Query: 214 PPLISSDPFLIHPPHLSPHHPPHLPPPGQFVPFQTQQSRSPLQRIENEVELLGEHLPVGG 273
PPLISSDPFLIHPPHLSPHHPPHLPPPGQFVPFQTQQSRSPLQRIENEVELLGEHLPVGG
Sbjct: 181 PPLISSDPFLIHPPHLSPHHPPHLPPPGQFVPFQTQQSRSPLQRIENEVELLGEHLPVGG 240
Query: 274 FTYPPSAHPPTLPPSAPLQFLTHDPLHQEVSFGVPYPPFMPRRLTGRSRYRSQQPIPPPP 333
FTYPPSAHPPTLPPSAPLQFLTHDPLHQEVSFGVPYPPFMPRRLTGRSRYRSQQPIPPPP
Sbjct: 241 FTYPPSAHPPTLPPSAPLQFLTHDPLHQEVSFGVPYPPFMPRRLTGRSRYRSQQPIPPPP 300
Query: 334 YHPSLLPYVLSMLPVPPAVGPTFSFELDVEDGEVENYEALLNLAERLGEAKPRGLTKADI 393
YHPSLLPYVLSMLPVPPAVGPTFSFELDVEDGEVENYEALLNLAERLGEAKPRGLTKADI
Sbjct: 301 YHPSLLPYVLSMLPVPPAVGPTFSFELDVEDGEVENYEALLNLAERLGEAKPRGLTKADI 360
Query: 394 EQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPIC 453
EQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPIC
Sbjct: 361 EQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPIC 420
Query: 454 RADASEVHRDSE 465
RADASEVHRDSE
Sbjct: 421 RADASEVHRDSE 432
>gi|37577177 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 925 bits (2391), Expect = 0.0
Identities = 432/432 (100%), Positives = 432/432 (100%)
Query: 34 MRPWEMTSNRQPPSVRPSQHHFSGERCNTPARNRRSPPVRRQRGRRDRLSRHNSISQDEN 93
MRPWEMTSNRQPPSVRPSQHHFSGERCNTPARNRRSPPVRRQRGRRDRLSRHNSISQDEN
Sbjct: 1 MRPWEMTSNRQPPSVRPSQHHFSGERCNTPARNRRSPPVRRQRGRRDRLSRHNSISQDEN 60
Query: 94 YHHLPYAQQQAIEEPRAFHPPNVSPRLLHPAAHPPQQNAVMVDIHDQLHQGTVPVSYTVT 153
YHHLPYAQQQAIEEPRAFHPPNVSPRLLHPAAHPPQQNAVMVDIHDQLHQGTVPVSYTVT
Sbjct: 61 YHHLPYAQQQAIEEPRAFHPPNVSPRLLHPAAHPPQQNAVMVDIHDQLHQGTVPVSYTVT 120
Query: 154 TVAPHGIPLCTGQHIPACSTQQVPGCSVVFSGQHLPVCSVPPPMLQACSVQHLPVPYAAF 213
TVAPHGIPLCTGQHIPACSTQQVPGCSVVFSGQHLPVCSVPPPMLQACSVQHLPVPYAAF
Sbjct: 121 TVAPHGIPLCTGQHIPACSTQQVPGCSVVFSGQHLPVCSVPPPMLQACSVQHLPVPYAAF 180
Query: 214 PPLISSDPFLIHPPHLSPHHPPHLPPPGQFVPFQTQQSRSPLQRIENEVELLGEHLPVGG 273
PPLISSDPFLIHPPHLSPHHPPHLPPPGQFVPFQTQQSRSPLQRIENEVELLGEHLPVGG
Sbjct: 181 PPLISSDPFLIHPPHLSPHHPPHLPPPGQFVPFQTQQSRSPLQRIENEVELLGEHLPVGG 240
Query: 274 FTYPPSAHPPTLPPSAPLQFLTHDPLHQEVSFGVPYPPFMPRRLTGRSRYRSQQPIPPPP 333
FTYPPSAHPPTLPPSAPLQFLTHDPLHQEVSFGVPYPPFMPRRLTGRSRYRSQQPIPPPP
Sbjct: 241 FTYPPSAHPPTLPPSAPLQFLTHDPLHQEVSFGVPYPPFMPRRLTGRSRYRSQQPIPPPP 300
Query: 334 YHPSLLPYVLSMLPVPPAVGPTFSFELDVEDGEVENYEALLNLAERLGEAKPRGLTKADI 393
YHPSLLPYVLSMLPVPPAVGPTFSFELDVEDGEVENYEALLNLAERLGEAKPRGLTKADI
Sbjct: 301 YHPSLLPYVLSMLPVPPAVGPTFSFELDVEDGEVENYEALLNLAERLGEAKPRGLTKADI 360
Query: 394 EQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPIC 453
EQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPIC
Sbjct: 361 EQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPIC 420
Query: 454 RADASEVHRDSE 465
RADASEVHRDSE
Sbjct: 421 RADASEVHRDSE 432
>gi|7662486 ring finger protein 44 [Homo sapiens]
Length = 432
Score = 533 bits (1372), Expect = e-151
Identities = 271/445 (60%), Positives = 321/445 (72%), Gaps = 26/445 (5%)
Query: 34 MRPWEMTSNRQPPSVRPSQHHFSGERCNTPARNRRSP----PVRRQRGRRDRLSRHNSIS 89
MRPW + R PPS Q FS +TP + SP P+ R +RL S
Sbjct: 1 MRPWALAVTRWPPSAPVGQRRFSAGPGSTPGQLWGSPGLEGPLASPPARDERLPSQQPPS 60
Query: 90 QDENYHHLPYAQQQAIEEPRAFHPPNVSPRLLHPAAHPPQQNAVMVDIHDQLHQGTVPVS 149
+ HLP +EE RA P SPR+LHPA QQ+ MVD+H+Q+HQG VP+S
Sbjct: 61 RPP---HLP------VEERRASAPAGGSPRMLHPAT---QQSPFMVDLHEQVHQGPVPLS 108
Query: 150 YTVTTVAPHGIPLCTGQHIPACSTQQVPGCSVVFSGQHLPVCSVPPPMLQACSVQHLPVP 209
YTVTTV G PL TGQHIP CS QQ+P CSV+FSGQH P+C +PPP++QAC++Q LPVP
Sbjct: 109 YTVTTVTTQGFPLPTGQHIPGCSAQQLPACSVMFSGQHYPLCCLPPPLIQACTMQQLPVP 168
Query: 210 YAAFPPLISSDPFLIHPPHLSPH-HPPHLPPPGQFVPFQTQQSRSPLQRIENEVELLGEH 268
Y A+P LISSD +++HPP +P P H+ P GQFV QTQ R PLQR++N+V+L G+
Sbjct: 169 YQAYPHLISSDHYILHPPPPAPPPQPTHMAPLGQFVSLQTQHPRMPLQRLDNDVDLRGDQ 228
Query: 269 LPVGGFTYPPSAHPPTLPPSAPLQFLTHDPLHQEVSFGVPYPPFMPRRLTGRSRYRSQQP 328
+G FTY SA P L PS PL +L HDPLHQE+SFGVPY MPRRL+ + RYR QQP
Sbjct: 229 PSLGSFTYSTSAPGPALSPSVPLHYLPHDPLHQELSFGVPYSHMMPRRLSTQ-RYRLQQP 287
Query: 329 IPPPP-------YHPSLLPYVLSMLPVPP-AVGPTFSFELDVEDGEVENYEALLNLAERL 380
+PPPP Y+PS LPY LSMLP+ P A+GPT S +LDV+D E+ENYEALLNLAERL
Sbjct: 288 LPPPPPPPPPPPYYPSFLPYFLSMLPMSPTAMGPTISLDLDVDDVEMENYEALLNLAERL 347
Query: 381 GEAKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCV 440
G+AKPRGLTKADIEQLPSYRFNP++HQSEQTLCVVC DFE+RQLLRVLPCNHEFH KCV
Sbjct: 348 GDAKPRGLTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEARQLLRVLPCNHEFHTKCV 407
Query: 441 DKWLKANRTCPICRADASEVHRDSE 465
DKWLKANRTCPICRADASEV R++E
Sbjct: 408 DKWLKANRTCPICRADASEVPREAE 432
>gi|5174653 ring finger protein 6 [Homo sapiens]
Length = 685
Score = 75.1 bits (183), Expect = 1e-13
Identities = 34/70 (48%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 386 RGLTKADIEQLPSYRFNPNNHQSEQ-TLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWL 444
RGLTK I+ L + + N+ SE +C VC+ D+ + LR LPC HEFH C+D+WL
Sbjct: 604 RGLTKEQIDNLSTRHYEHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWL 663
Query: 445 KANRTCPICR 454
N TCPICR
Sbjct: 664 SENCTCPICR 673
>gi|34305295 ring finger protein 6 [Homo sapiens]
Length = 685
Score = 75.1 bits (183), Expect = 1e-13
Identities = 34/70 (48%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 386 RGLTKADIEQLPSYRFNPNNHQSEQ-TLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWL 444
RGLTK I+ L + + N+ SE +C VC+ D+ + LR LPC HEFH C+D+WL
Sbjct: 604 RGLTKEQIDNLSTRHYEHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWL 663
Query: 445 KANRTCPICR 454
N TCPICR
Sbjct: 664 SENCTCPICR 673
>gi|34305293 ring finger protein 6 [Homo sapiens]
Length = 685
Score = 75.1 bits (183), Expect = 1e-13
Identities = 34/70 (48%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 386 RGLTKADIEQLPSYRFNPNNHQSEQ-TLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWL 444
RGLTK I+ L + + N+ SE +C VC+ D+ + LR LPC HEFH C+D+WL
Sbjct: 604 RGLTKEQIDNLSTRHYEHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWL 663
Query: 445 KANRTCPICR 454
N TCPICR
Sbjct: 664 SENCTCPICR 673
>gi|37595553 ring finger protein 111 [Homo sapiens]
Length = 986
Score = 74.7 bits (182), Expect = 2e-13
Identities = 79/281 (28%), Positives = 106/281 (37%), Gaps = 40/281 (14%)
Query: 209 PYAAFPPLISSDPFLIHPPHLSPHHPP---HLPPPGQFVPFQTQQSRSPLQRIENEVELL 265
P A PP + P HL P H P H+P P Q +QR+E + +
Sbjct: 704 PVAPPPPTHLASTAAPIPQHLPPTHQPISHHIPATAP--PAQRLHPHEVMQRMEVQRRRM 761
Query: 266 GEHLPVGGFTYPPSAHPPTLPPSAPLQFLTHDPLHQEVSFGVPYPPFMPRRLTGRSRYRS 325
+H P PP HP + P+ H P Q +S P G +
Sbjct: 762 MQH-PTRAHERPPP-HPHRMHPNYGHGHHIHVP--QTMSSHPRQAPERSAWELGIEAGVT 817
Query: 326 QQPIPPPPYHPSLLPY---------VLSMLP--VPPAVG-PTFSFELDVEDGEV------ 367
P HP L Y L LP VP G P + DG
Sbjct: 818 AATYTPGALHPHLAHYHAPPRLHHLQLGALPLMVPDMAGYPHIRYISSGLDGTSFRGPFR 877
Query: 368 ENYEALLNLAERLGEAKPRGLTKADIEQLP---SYRFNP---------NNHQSEQTLCVV 415
N+E L++L ERLG RG ++ IE+ Y+ + + C +
Sbjct: 878 GNFEELIHLEERLGNVN-RGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTI 936
Query: 416 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRAD 456
C+ E + +R LPC H FH CVD+WL N+ CPICR D
Sbjct: 937 CLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVD 977
>gi|34452686 ring finger protein, LIM domain interacting [Homo
sapiens]
Length = 624
Score = 73.6 bits (179), Expect = 4e-13
Identities = 32/71 (45%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 384 KPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKW 443
+PRGLTK I+ L F N+ C VC+ ++ LR LPC+HE+H C+D+W
Sbjct: 544 QPRGLTKEQIDNLAMRSFGENDALKT---CSVCITEYTEGNKLRKLPCSHEYHVHCIDRW 600
Query: 444 LKANRTCPICR 454
L N TCPICR
Sbjct: 601 LSENSTCPICR 611
>gi|34452684 ring finger protein, LIM domain interacting [Homo
sapiens]
Length = 624
Score = 73.6 bits (179), Expect = 4e-13
Identities = 32/71 (45%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 384 KPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKW 443
+PRGLTK I+ L F N+ C VC+ ++ LR LPC+HE+H C+D+W
Sbjct: 544 QPRGLTKEQIDNLAMRSFGENDALKT---CSVCITEYTEGNKLRKLPCSHEYHVHCIDRW 600
Query: 444 LKANRTCPICR 454
L N TCPICR
Sbjct: 601 LSENSTCPICR 611
>gi|34577087 ring finger protein 13 [Homo sapiens]
Length = 381
Score = 69.7 bits (169), Expect = 5e-12
Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 383 AKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDK 442
A+ L K +++LP ++F + E +C +C+ ++E LR+LPC+H +H KCVD
Sbjct: 213 ARRNRLRKDQLKKLPVHKFKKGD---EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDP 269
Query: 443 WL-KANRTCPICRADASEVHRDSE 465
WL K +TCP+C+ DS+
Sbjct: 270 WLTKTKKTCPVCKQKVVPSQGDSD 293
>gi|6005864 ring finger protein 13 [Homo sapiens]
Length = 381
Score = 69.7 bits (169), Expect = 5e-12
Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 383 AKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDK 442
A+ L K +++LP ++F + E +C +C+ ++E LR+LPC+H +H KCVD
Sbjct: 213 ARRNRLRKDQLKKLPVHKFKKGD---EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDP 269
Query: 443 WL-KANRTCPICRADASEVHRDSE 465
WL K +TCP+C+ DS+
Sbjct: 270 WLTKTKKTCPVCKQKVVPSQGDSD 293
>gi|14149702 ring finger protein 167 [Homo sapiens]
Length = 350
Score = 66.6 bits (161), Expect = 4e-11
Identities = 29/76 (38%), Positives = 48/76 (63%), Gaps = 7/76 (9%)
Query: 388 LTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWL-KA 446
LTK ++Q+P++ + + + +C +C+ ++E LRVLPC H +H++CVD WL +
Sbjct: 208 LTKEQLKQIPTHDYQKGD---QYDVCAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQT 264
Query: 447 NRTCPICRADASEVHR 462
+TCPIC+ VHR
Sbjct: 265 RKTCPICK---QPVHR 277
>gi|7657520 ring finger protein 11 [Homo sapiens]
Length = 154
Score = 63.5 bits (153), Expect = 4e-10
Identities = 40/126 (31%), Positives = 56/126 (44%), Gaps = 24/126 (19%)
Query: 330 PPPPYHPSLLPYVLSMLPVPPAVGPTFSFELDVEDGEVENYEALLNLAERLGEAKPRGLT 389
PPPPY +PVP L + E E + +A+R+G
Sbjct: 36 PPPPYQ--------EQVPVPVYHPTPSQTRLATQLTEEEQ----IRIAQRIGL------- 76
Query: 390 KADIEQLPSYRFNPNNHQSEQTL--CVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKAN 447
I+ LP ++P SE+ + CV+CM DF +R LPC H +H C+D WL +
Sbjct: 77 ---IQHLPKGVYDPGRDGSEKKIRECVICMMDFVYGDPIRFLPCMHIYHLDCIDDWLMRS 133
Query: 448 RTCPIC 453
TCP C
Sbjct: 134 FTCPSC 139
>gi|58331204 ring finger protein 150 [Homo sapiens]
Length = 438
Score = 63.5 bits (153), Expect = 4e-10
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 379 RLGEAKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAK 438
RLG+A + ++K I + +S+ C VC+ ++ ++R+LPC H FH
Sbjct: 247 RLGDAAKKAISKLQIRTIKK---GDKETESDFDNCAVCIEGYKPNDVVRILPCRHLFHKS 303
Query: 439 CVDKWLKANRTCPICR 454
CVD WL +RTCP+C+
Sbjct: 304 CVDPWLLDHRTCPMCK 319
>gi|57165361 ring finger protein 165 [Homo sapiens]
Length = 346
Score = 62.4 bits (150), Expect = 8e-10
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 14/102 (13%)
Query: 368 ENYEALLNLAERLGEAKPRGLTKADIEQLP-SYRFNPNNHQSEQ------------TLCV 414
E+YE LL L +RLG RG + IE+ +++ Q + C
Sbjct: 237 ESYEELLQLEDRLGNVT-RGAVQNTIERFTFPHKYKKRRPQDGKGKKDEGEESDTDEKCT 295
Query: 415 VCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRAD 456
+C+ E + +R LPC H FH CVD+WL ++ CPICR D
Sbjct: 296 ICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVD 337
>gi|63025220 ring finger protein 215 [Homo sapiens]
Length = 377
Score = 62.4 bits (150), Expect = 8e-10
Identities = 24/42 (57%), Positives = 30/42 (71%)
Query: 413 CVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 454
C VC+ F ++Q LRVLPC HEFH CVD WL +TCP+C+
Sbjct: 325 CAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWLMLQQTCPLCK 366
>gi|29789407 ring finger protein 149 [Homo sapiens]
Length = 400
Score = 61.6 bits (148), Expect = 1e-09
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 371 EALLNLAERLGEAKPRGLTKADIEQL--PSYRFNPNNHQSEQTLCVVCMCDFESRQLLRV 428
+ L ++G R TK I QL + + + C VC+ +F+ + ++R+
Sbjct: 225 QRFLYTGSQIGSQSHRKETKKVIGQLLLHTVKHGEKGIDVDAENCAVCIENFKVKDIIRI 284
Query: 429 LPCNHEFHAKCVDKWLKANRTCPICRAD 456
LPC H FH C+D WL +RTCP+C+ D
Sbjct: 285 LPCKHIFHRICIDPWLLDHRTCPMCKLD 312
>gi|56711322 ring finger protein 43 [Homo sapiens]
Length = 783
Score = 61.6 bits (148), Expect = 1e-09
Identities = 24/52 (46%), Positives = 33/52 (63%)
Query: 408 SEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 459
S +C +C+ +F Q LRV+ C HEFH CVD WL +RTCP+C + +E
Sbjct: 267 SSAPVCAICLEEFSEGQELRVISCLHEFHRNCVDPWLHQHRTCPLCMFNITE 318
>gi|37622894 ring finger protein 126 [Homo sapiens]
Length = 311
Score = 61.6 bits (148), Expect = 1e-09
Identities = 65/226 (28%), Positives = 85/226 (37%), Gaps = 32/226 (14%)
Query: 248 TQQSRSPLQRIENEVELLGEHLPVGGF-TYPPSAHPPTLPPSA-------PLQFLTHD-P 298
T QSR PL+ ++ + L + F + S PT PP A P D P
Sbjct: 58 TDQSRPPLEHVDQHLFTLPQGYGQFAFGIFDDSFEIPTFPPGAQADDGRDPESRRERDHP 117
Query: 299 LHQEVSFGVPYPPFMPRRLTGRSR---------YRSQQPIPPPPYHPSLLPY-VLSMLPV 348
P RR TGR + I P PSL P+ VL P+
Sbjct: 118 SRHRYGARQPRARLTTRRATGRHEGVPTLEGIIQQLVNGIITPATIPSLGPWGVLHSNPM 177
Query: 349 PPAVGPTFSFELDVEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQS 408
A G +G LLN E G P K I+ LP+ H
Sbjct: 178 DYAWGA---------NGLDAIITQLLNQFENTG---PPPADKEKIQALPTVPVT-EEHVG 224
Query: 409 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 454
C VC D+ + +R LPCNH FH C+ WL+ + +CP+CR
Sbjct: 225 SGLECPVCKDDYALGERVRQLPCNHLFHDGCIVPWLEQHDSCPVCR 270
>gi|239749332 PREDICTED: hypothetical protein XP_002347002 [Homo
sapiens]
Length = 183
Score = 61.2 bits (147), Expect = 2e-09
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 393 IEQLPSYRFNPNNHQSEQTL--CVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTC 450
++ LP ++P +SE+ + CV+C+ +F +R LPC H FH C+D WL + TC
Sbjct: 66 LQCLPEEVYDPGRDKSEEEMPECVICLLEFVCGDPIRCLPCKHFFHLDCIDTWLLRSFTC 125
Query: 451 PICR 454
P CR
Sbjct: 126 PYCR 129
>gi|239743424 PREDICTED: hypothetical protein XP_002342853 [Homo
sapiens]
Length = 183
Score = 61.2 bits (147), Expect = 2e-09
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 393 IEQLPSYRFNPNNHQSEQTL--CVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTC 450
++ LP ++P +SE+ + CV+C+ +F +R LPC H FH C+D WL + TC
Sbjct: 66 LQCLPEEVYDPGRDKSEEEMPECVICLLEFVCGDPIRCLPCKHFFHLDCIDTWLLRSFTC 125
Query: 451 PICR 454
P CR
Sbjct: 126 PYCR 129
>gi|37675277 ring finger protein 148 [Homo sapiens]
Length = 305
Score = 60.1 bits (144), Expect = 4e-09
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 413 CVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRAD 456
CVVC ++ + ++R+L C H FH C+D WL A+RTCP+C+ D
Sbjct: 258 CVVCFDTYKPQDVVRILTCKHFFHKACIDPWLLAHRTCPMCKCD 301
>gi|37588873 ring finger protein 128 isoform 1 [Homo sapiens]
Length = 428
Score = 58.9 bits (141), Expect = 9e-09
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 413 CVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRAD 456
C VC+ ++ L+R+L CNH FH CVD WL +RTCP+C+ D
Sbjct: 277 CAVCIELYKPNDLVRILTCNHIFHKTCVDPWLLEHRTCPMCKCD 320
>gi|37588871 ring finger protein 128 isoform 2 [Homo sapiens]
Length = 402
Score = 58.9 bits (141), Expect = 9e-09
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 413 CVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRAD 456
C VC+ ++ L+R+L CNH FH CVD WL +RTCP+C+ D
Sbjct: 251 CAVCIELYKPNDLVRILTCNHIFHKTCVDPWLLEHRTCPMCKCD 294
>gi|197245452 ring finger protein 24 isoform 2 [Homo sapiens]
Length = 169
Score = 58.5 bits (140), Expect = 1e-08
Identities = 21/42 (50%), Positives = 28/42 (66%)
Query: 412 LCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPIC 453
LC VC+ DF+ R L + PC H FH KC+ KWL+ + CP+C
Sbjct: 98 LCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLC 139
>gi|197245450 ring finger protein 24 isoform 1 [Homo sapiens]
Length = 148
Score = 58.5 bits (140), Expect = 1e-08
Identities = 21/42 (50%), Positives = 28/42 (66%)
Query: 412 LCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPIC 453
LC VC+ DF+ R L + PC H FH KC+ KWL+ + CP+C
Sbjct: 77 LCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLC 118
>gi|6857791 ring finger protein 24 isoform 1 [Homo sapiens]
Length = 148
Score = 58.5 bits (140), Expect = 1e-08
Identities = 21/42 (50%), Positives = 28/42 (66%)
Query: 412 LCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPIC 453
LC VC+ DF+ R L + PC H FH KC+ KWL+ + CP+C
Sbjct: 77 LCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLC 118
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.135 0.439
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,625,502
Number of Sequences: 37866
Number of extensions: 1599643
Number of successful extensions: 10635
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 131
Number of HSP's successfully gapped in prelim test: 538
Number of HSP's that attempted gapping in prelim test: 7984
Number of HSP's gapped (non-prelim): 2275
length of query: 465
length of database: 18,247,518
effective HSP length: 106
effective length of query: 359
effective length of database: 14,233,722
effective search space: 5109906198
effective search space used: 5109906198
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.