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Search of human proteins with 35493725
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|35493725 vacuolar protein sorting 13B isoform 3 [Homo
sapiens]
(863 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|35493725 vacuolar protein sorting 13B isoform 3 [Homo sapiens] 1741 0.0
gi|35493713 vacuolar protein sorting 13B isoform 5 [Homo sapiens] 1693 0.0
gi|35493701 vacuolar protein sorting 13B isoform 1 [Homo sapiens] 1693 0.0
gi|119874215 vacuolar protein sorting 13B isoform 4 [Homo sapiens] 815 0.0
gi|42544121 vacuolar protein sorting 13C protein isoform 1A [Hom... 84 6e-16
gi|66348091 vacuolar protein sorting 13C protein isoform 1B [Hom... 84 6e-16
gi|15619008 vacuolar protein sorting 13A isoform B [Homo sapiens] 74 4e-13
gi|66346676 vacuolar protein sorting 13A isoform D [Homo sapiens] 74 4e-13
gi|66346674 vacuolar protein sorting 13A isoform A [Homo sapiens] 74 4e-13
gi|66346672 vacuolar protein sorting 13A isoform C [Homo sapiens] 74 4e-13
gi|66347845 vacuolar protein sorting 13C protein isoform 2B [Hom... 72 3e-12
gi|66347828 vacuolar protein sorting 13C protein isoform 2A [Hom... 72 3e-12
gi|54607141 vacuolar protein sorting 13D isoform 2 [Homo sapiens] 65 4e-10
gi|54607139 vacuolar protein sorting 13D isoform 1 [Homo sapiens] 65 4e-10
gi|134152667 ICBP90 binding protein 1 [Homo sapiens] 55 2e-07
gi|55749659 UHRF1 (ICBP90) binding protein 1-like isoform b [Hom... 54 8e-07
gi|55749644 UHRF1 (ICBP90) binding protein 1-like isoform a [Hom... 54 8e-07
gi|226371669 discs large homolog 7 isoform b [Homo sapiens] 39 0.027
gi|237858668 hypothetical protein LOC123207 isoform d [Homo sapi... 38 0.046
gi|217416386 aarF domain containing kinase 4 isoform b [Homo sap... 34 0.51
gi|27363457 aarF domain containing kinase 4 isoform a [Homo sapi... 34 0.51
gi|54112407 protein kinase CHK2 isoform c [Homo sapiens] 33 0.87
gi|62243734 signal transducing adaptor family member 2 isoform 1... 33 0.87
gi|14211935 testes development-related NYD-SP18 [Homo sapiens] 33 1.5
gi|169216486 PREDICTED: hCG_1742852 [Homo sapiens] 32 1.9
gi|169216528 PREDICTED: hCG_1742852 [Homo sapiens] 32 1.9
gi|239747074 PREDICTED: hypothetical protein XP_002343911 [Homo ... 32 1.9
gi|169216761 PREDICTED: hCG_1742852 [Homo sapiens] 32 1.9
gi|28212280 hypothetical protein LOC283579 [Homo sapiens] 32 1.9
gi|219689113 two pore segment channel 1 isoform 1 [Homo sapiens] 32 2.5
>gi|35493725 vacuolar protein sorting 13B isoform 3 [Homo sapiens]
Length = 863
Score = 1741 bits (4508), Expect = 0.0
Identities = 863/863 (100%), Positives = 863/863 (100%)
Query: 1 MLESYVTPILMSYVNRYIKNLKPSDLQLSLWGGDVVLSKLELKLDVLEQELKLPFTFLSG 60
MLESYVTPILMSYVNRYIKNLKPSDLQLSLWGGDVVLSKLELKLDVLEQELKLPFTFLSG
Sbjct: 1 MLESYVTPILMSYVNRYIKNLKPSDLQLSLWGGDVVLSKLELKLDVLEQELKLPFTFLSG 60
Query: 61 HIHELRIHVPWTKLGSEPVVITINTMECILKLKDGIQDDHESCGSNSTNRSTAESTKSSI 120
HIHELRIHVPWTKLGSEPVVITINTMECILKLKDGIQDDHESCGSNSTNRSTAESTKSSI
Sbjct: 61 HIHELRIHVPWTKLGSEPVVITINTMECILKLKDGIQDDHESCGSNSTNRSTAESTKSSI 120
Query: 121 KPRRMQQAAPTDPDLPPGYVQSLIRRVVNNVNIVINNLILKYVEDDIVLSVNITSAECYT 180
KPRRMQQAAPTDPDLPPGYVQSLIRRVVNNVNIVINNLILKYVEDDIVLSVNITSAECYT
Sbjct: 121 KPRRMQQAAPTDPDLPPGYVQSLIRRVVNNVNIVINNLILKYVEDDIVLSVNITSAECYT 180
Query: 181 VGELWDRAFMDISATDLVLRKVINFSDCTVCLDKRNASGKIEFYQDPLLYKCSFRTRLHF 240
VGELWDRAFMDISATDLVLRKVINFSDCTVCLDKRNASGKIEFYQDPLLYKCSFRTRLHF
Sbjct: 181 VGELWDRAFMDISATDLVLRKVINFSDCTVCLDKRNASGKIEFYQDPLLYKCSFRTRLHF 240
Query: 241 TYENLNSKMPSVIKIHTLVESLKLSITDQQLPMFIRIMQLGIALYYGEIGNFKEGEIEDL 300
TYENLNSKMPSVIKIHTLVESLKLSITDQQLPMFIRIMQLGIALYYGEIGNFKEGEIEDL
Sbjct: 241 TYENLNSKMPSVIKIHTLVESLKLSITDQQLPMFIRIMQLGIALYYGEIGNFKEGEIEDL 300
Query: 301 TCHNKDMLGNITGSEDETRIDMQYPAQHKGQELYSQQDEEQPQGWVSWAWSFVPAIVSYD 360
TCHNKDMLGNITGSEDETRIDMQYPAQHKGQELYSQQDEEQPQGWVSWAWSFVPAIVSYD
Sbjct: 301 TCHNKDMLGNITGSEDETRIDMQYPAQHKGQELYSQQDEEQPQGWVSWAWSFVPAIVSYD 360
Query: 361 DGEEDFVGNDPASTMHQQKAQTLKDPIVSIGFYCTKATVTFKLTEMQVESSYYSPQKVKS 420
DGEEDFVGNDPASTMHQQKAQTLKDPIVSIGFYCTKATVTFKLTEMQVESSYYSPQKVKS
Sbjct: 361 DGEEDFVGNDPASTMHQQKAQTLKDPIVSIGFYCTKATVTFKLTEMQVESSYYSPQKVKS 420
Query: 421 KEVLCWEQEGTTVEALMMGEPFFDCQIGFVGCRAMCLKGIMGVKDFEENMNRSETEACFF 480
KEVLCWEQEGTTVEALMMGEPFFDCQIGFVGCRAMCLKGIMGVKDFEENMNRSETEACFF
Sbjct: 421 KEVLCWEQEGTTVEALMMGEPFFDCQIGFVGCRAMCLKGIMGVKDFEENMNRSETEACFF 480
Query: 481 ICGDNLSTKGFTYLTNSLFDYRSPENNGTRAEFILDSTHHKETYTEIAGMQRFGAFYMDY 540
ICGDNLSTKGFTYLTNSLFDYRSPENNGTRAEFILDSTHHKETYTEIAGMQRFGAFYMDY
Sbjct: 481 ICGDNLSTKGFTYLTNSLFDYRSPENNGTRAEFILDSTHHKETYTEIAGMQRFGAFYMDY 540
Query: 541 LYTMENTSGKGSTNQQDFSSGKSEDLGTVQEKSTKSLVIGPLDFRLDSSAVHRILKMIVC 600
LYTMENTSGKGSTNQQDFSSGKSEDLGTVQEKSTKSLVIGPLDFRLDSSAVHRILKMIVC
Sbjct: 541 LYTMENTSGKGSTNQQDFSSGKSEDLGTVQEKSTKSLVIGPLDFRLDSSAVHRILKMIVC 600
Query: 601 ALEHEYEPYSRLKSDIKDENETILNPEEVALLEEYIPTRHTSVTLLKCTCTISMAEFNLL 660
ALEHEYEPYSRLKSDIKDENETILNPEEVALLEEYIPTRHTSVTLLKCTCTISMAEFNLL
Sbjct: 601 ALEHEYEPYSRLKSDIKDENETILNPEEVALLEEYIPTRHTSVTLLKCTCTISMAEFNLL 660
Query: 661 DHLLPVIMGEKNSSNFMNTTNFQSLRPLPSIRILVDKINLEHSVPMYAEQLVHVVSSLTQ 720
DHLLPVIMGEKNSSNFMNTTNFQSLRPLPSIRILVDKINLEHSVPMYAEQLVHVVSSLTQ
Sbjct: 661 DHLLPVIMGEKNSSNFMNTTNFQSLRPLPSIRILVDKINLEHSVPMYAEQLVHVVSSLTQ 720
Query: 721 PSDNLLHYCYVHCYLKIFGFQAGLTSLDCSGSYCLPVPVIPSFSTALYGKLLKLPTCWTK 780
PSDNLLHYCYVHCYLKIFGFQAGLTSLDCSGSYCLPVPVIPSFSTALYGKLLKLPTCWTK
Sbjct: 721 PSDNLLHYCYVHCYLKIFGFQAGLTSLDCSGSYCLPVPVIPSFSTALYGKLLKLPTCWTK 780
Query: 781 RSQIAITEGIFELPNLTIQATRAQTLLLQAIYQSWSHLGNVSSSAVIEALINEIFLSIEI 840
RSQIAITEGIFELPNLTIQATRAQTLLLQAIYQSWSHLGNVSSSAVIEALINEIFLSIEI
Sbjct: 781 RSQIAITEGIFELPNLTIQATRAQTLLLQAIYQSWSHLGNVSSSAVIEALINEIFLSIEI 840
Query: 841 GSCYVAQVDLELLASNDPPTSTS 863
GSCYVAQVDLELLASNDPPTSTS
Sbjct: 841 GSCYVAQVDLELLASNDPPTSTS 863
>gi|35493713 vacuolar protein sorting 13B isoform 5 [Homo sapiens]
Length = 4022
Score = 1693 bits (4384), Expect = 0.0
Identities = 839/842 (99%), Positives = 840/842 (99%)
Query: 1 MLESYVTPILMSYVNRYIKNLKPSDLQLSLWGGDVVLSKLELKLDVLEQELKLPFTFLSG 60
MLESYVTPILMSYVNRYIKNLKPSDLQLSLWGGDVVLSKLELKLDVLEQELKLPFTFLSG
Sbjct: 1 MLESYVTPILMSYVNRYIKNLKPSDLQLSLWGGDVVLSKLELKLDVLEQELKLPFTFLSG 60
Query: 61 HIHELRIHVPWTKLGSEPVVITINTMECILKLKDGIQDDHESCGSNSTNRSTAESTKSSI 120
HIHELRIHVPWTKLGSEPVVITINTMECILKLKDGIQDDHESCGSNSTNRSTAESTKSSI
Sbjct: 61 HIHELRIHVPWTKLGSEPVVITINTMECILKLKDGIQDDHESCGSNSTNRSTAESTKSSI 120
Query: 121 KPRRMQQAAPTDPDLPPGYVQSLIRRVVNNVNIVINNLILKYVEDDIVLSVNITSAECYT 180
KPRRMQQAAPTDPDLPPGYVQSLIRRVVNNVNIVINNLILKYVEDDIVLSVNITSAECYT
Sbjct: 121 KPRRMQQAAPTDPDLPPGYVQSLIRRVVNNVNIVINNLILKYVEDDIVLSVNITSAECYT 180
Query: 181 VGELWDRAFMDISATDLVLRKVINFSDCTVCLDKRNASGKIEFYQDPLLYKCSFRTRLHF 240
VGELWDRAFMDISATDLVLRKVINFSDCTVCLDKRNASGKIEFYQDPLLYKCSFRTRLHF
Sbjct: 181 VGELWDRAFMDISATDLVLRKVINFSDCTVCLDKRNASGKIEFYQDPLLYKCSFRTRLHF 240
Query: 241 TYENLNSKMPSVIKIHTLVESLKLSITDQQLPMFIRIMQLGIALYYGEIGNFKEGEIEDL 300
TYENLNSKMPSVIKIHTLVESLKLSITDQQLPMFIRIMQLGIALYYGEIGNFKEGEIEDL
Sbjct: 241 TYENLNSKMPSVIKIHTLVESLKLSITDQQLPMFIRIMQLGIALYYGEIGNFKEGEIEDL 300
Query: 301 TCHNKDMLGNITGSEDETRIDMQYPAQHKGQELYSQQDEEQPQGWVSWAWSFVPAIVSYD 360
TCHNKDMLGNITGSEDETRIDMQYPAQHKGQELYSQQDEEQPQGWVSWAWSFVPAIVSYD
Sbjct: 301 TCHNKDMLGNITGSEDETRIDMQYPAQHKGQELYSQQDEEQPQGWVSWAWSFVPAIVSYD 360
Query: 361 DGEEDFVGNDPASTMHQQKAQTLKDPIVSIGFYCTKATVTFKLTEMQVESSYYSPQKVKS 420
DGEEDFVGNDPASTMHQQKAQTLKDPIVSIGFYCTKATVTFKLTEMQVESSYYSPQKVKS
Sbjct: 361 DGEEDFVGNDPASTMHQQKAQTLKDPIVSIGFYCTKATVTFKLTEMQVESSYYSPQKVKS 420
Query: 421 KEVLCWEQEGTTVEALMMGEPFFDCQIGFVGCRAMCLKGIMGVKDFEENMNRSETEACFF 480
KEVLCWEQEGTTVEALMMGEPFFDCQIGFVGCRAMCLKGIMGVKDFEENMNRSETEACFF
Sbjct: 421 KEVLCWEQEGTTVEALMMGEPFFDCQIGFVGCRAMCLKGIMGVKDFEENMNRSETEACFF 480
Query: 481 ICGDNLSTKGFTYLTNSLFDYRSPENNGTRAEFILDSTHHKETYTEIAGMQRFGAFYMDY 540
ICGDNLSTKGFTYLTNSLFDYRSPENNGTRAEFILDSTHHKETYTEIAGMQRFGAFYMDY
Sbjct: 481 ICGDNLSTKGFTYLTNSLFDYRSPENNGTRAEFILDSTHHKETYTEIAGMQRFGAFYMDY 540
Query: 541 LYTMENTSGKGSTNQQDFSSGKSEDLGTVQEKSTKSLVIGPLDFRLDSSAVHRILKMIVC 600
LYTMENTSGKGSTNQQDFSSGKSEDLGTVQEKSTKSLVIGPLDFRLDSSAVHRILKMIVC
Sbjct: 541 LYTMENTSGKGSTNQQDFSSGKSEDLGTVQEKSTKSLVIGPLDFRLDSSAVHRILKMIVC 600
Query: 601 ALEHEYEPYSRLKSDIKDENETILNPEEVALLEEYIPTRHTSVTLLKCTCTISMAEFNLL 660
ALEHEYEPYSRLKSDIKDENETILNPEEVALLEEYIPTRHTSVTLLKCTCTISMAEFNLL
Sbjct: 601 ALEHEYEPYSRLKSDIKDENETILNPEEVALLEEYIPTRHTSVTLLKCTCTISMAEFNLL 660
Query: 661 DHLLPVIMGEKNSSNFMNTTNFQSLRPLPSIRILVDKINLEHSVPMYAEQLVHVVSSLTQ 720
DHLLPVIMGEKNSSNFMNTTNFQSLRPLPSIRILVDKINLEHSVPMYAEQLVHVVSSLTQ
Sbjct: 661 DHLLPVIMGEKNSSNFMNTTNFQSLRPLPSIRILVDKINLEHSVPMYAEQLVHVVSSLTQ 720
Query: 721 PSDNLLHYCYVHCYLKIFGFQAGLTSLDCSGSYCLPVPVIPSFSTALYGKLLKLPTCWTK 780
PSDNLLHYCYVHCYLKIFGFQAGLTSLDCSGSYCLPVPVIPSFSTALYGKLLKLPTCWTK
Sbjct: 721 PSDNLLHYCYVHCYLKIFGFQAGLTSLDCSGSYCLPVPVIPSFSTALYGKLLKLPTCWTK 780
Query: 781 RSQIAITEGIFELPNLTIQATRAQTLLLQAIYQSWSHLGNVSSSAVIEALINEIFLSIEI 840
RSQIAITEGIFELPNLTIQATRAQTLLLQAIYQSWSHLGNVSSSAVIEALINEIFLSI +
Sbjct: 781 RSQIAITEGIFELPNLTIQATRAQTLLLQAIYQSWSHLGNVSSSAVIEALINEIFLSIGV 840
Query: 841 GS 842
S
Sbjct: 841 KS 842
>gi|35493701 vacuolar protein sorting 13B isoform 1 [Homo sapiens]
Length = 3997
Score = 1693 bits (4384), Expect = 0.0
Identities = 839/842 (99%), Positives = 840/842 (99%)
Query: 1 MLESYVTPILMSYVNRYIKNLKPSDLQLSLWGGDVVLSKLELKLDVLEQELKLPFTFLSG 60
MLESYVTPILMSYVNRYIKNLKPSDLQLSLWGGDVVLSKLELKLDVLEQELKLPFTFLSG
Sbjct: 1 MLESYVTPILMSYVNRYIKNLKPSDLQLSLWGGDVVLSKLELKLDVLEQELKLPFTFLSG 60
Query: 61 HIHELRIHVPWTKLGSEPVVITINTMECILKLKDGIQDDHESCGSNSTNRSTAESTKSSI 120
HIHELRIHVPWTKLGSEPVVITINTMECILKLKDGIQDDHESCGSNSTNRSTAESTKSSI
Sbjct: 61 HIHELRIHVPWTKLGSEPVVITINTMECILKLKDGIQDDHESCGSNSTNRSTAESTKSSI 120
Query: 121 KPRRMQQAAPTDPDLPPGYVQSLIRRVVNNVNIVINNLILKYVEDDIVLSVNITSAECYT 180
KPRRMQQAAPTDPDLPPGYVQSLIRRVVNNVNIVINNLILKYVEDDIVLSVNITSAECYT
Sbjct: 121 KPRRMQQAAPTDPDLPPGYVQSLIRRVVNNVNIVINNLILKYVEDDIVLSVNITSAECYT 180
Query: 181 VGELWDRAFMDISATDLVLRKVINFSDCTVCLDKRNASGKIEFYQDPLLYKCSFRTRLHF 240
VGELWDRAFMDISATDLVLRKVINFSDCTVCLDKRNASGKIEFYQDPLLYKCSFRTRLHF
Sbjct: 181 VGELWDRAFMDISATDLVLRKVINFSDCTVCLDKRNASGKIEFYQDPLLYKCSFRTRLHF 240
Query: 241 TYENLNSKMPSVIKIHTLVESLKLSITDQQLPMFIRIMQLGIALYYGEIGNFKEGEIEDL 300
TYENLNSKMPSVIKIHTLVESLKLSITDQQLPMFIRIMQLGIALYYGEIGNFKEGEIEDL
Sbjct: 241 TYENLNSKMPSVIKIHTLVESLKLSITDQQLPMFIRIMQLGIALYYGEIGNFKEGEIEDL 300
Query: 301 TCHNKDMLGNITGSEDETRIDMQYPAQHKGQELYSQQDEEQPQGWVSWAWSFVPAIVSYD 360
TCHNKDMLGNITGSEDETRIDMQYPAQHKGQELYSQQDEEQPQGWVSWAWSFVPAIVSYD
Sbjct: 301 TCHNKDMLGNITGSEDETRIDMQYPAQHKGQELYSQQDEEQPQGWVSWAWSFVPAIVSYD 360
Query: 361 DGEEDFVGNDPASTMHQQKAQTLKDPIVSIGFYCTKATVTFKLTEMQVESSYYSPQKVKS 420
DGEEDFVGNDPASTMHQQKAQTLKDPIVSIGFYCTKATVTFKLTEMQVESSYYSPQKVKS
Sbjct: 361 DGEEDFVGNDPASTMHQQKAQTLKDPIVSIGFYCTKATVTFKLTEMQVESSYYSPQKVKS 420
Query: 421 KEVLCWEQEGTTVEALMMGEPFFDCQIGFVGCRAMCLKGIMGVKDFEENMNRSETEACFF 480
KEVLCWEQEGTTVEALMMGEPFFDCQIGFVGCRAMCLKGIMGVKDFEENMNRSETEACFF
Sbjct: 421 KEVLCWEQEGTTVEALMMGEPFFDCQIGFVGCRAMCLKGIMGVKDFEENMNRSETEACFF 480
Query: 481 ICGDNLSTKGFTYLTNSLFDYRSPENNGTRAEFILDSTHHKETYTEIAGMQRFGAFYMDY 540
ICGDNLSTKGFTYLTNSLFDYRSPENNGTRAEFILDSTHHKETYTEIAGMQRFGAFYMDY
Sbjct: 481 ICGDNLSTKGFTYLTNSLFDYRSPENNGTRAEFILDSTHHKETYTEIAGMQRFGAFYMDY 540
Query: 541 LYTMENTSGKGSTNQQDFSSGKSEDLGTVQEKSTKSLVIGPLDFRLDSSAVHRILKMIVC 600
LYTMENTSGKGSTNQQDFSSGKSEDLGTVQEKSTKSLVIGPLDFRLDSSAVHRILKMIVC
Sbjct: 541 LYTMENTSGKGSTNQQDFSSGKSEDLGTVQEKSTKSLVIGPLDFRLDSSAVHRILKMIVC 600
Query: 601 ALEHEYEPYSRLKSDIKDENETILNPEEVALLEEYIPTRHTSVTLLKCTCTISMAEFNLL 660
ALEHEYEPYSRLKSDIKDENETILNPEEVALLEEYIPTRHTSVTLLKCTCTISMAEFNLL
Sbjct: 601 ALEHEYEPYSRLKSDIKDENETILNPEEVALLEEYIPTRHTSVTLLKCTCTISMAEFNLL 660
Query: 661 DHLLPVIMGEKNSSNFMNTTNFQSLRPLPSIRILVDKINLEHSVPMYAEQLVHVVSSLTQ 720
DHLLPVIMGEKNSSNFMNTTNFQSLRPLPSIRILVDKINLEHSVPMYAEQLVHVVSSLTQ
Sbjct: 661 DHLLPVIMGEKNSSNFMNTTNFQSLRPLPSIRILVDKINLEHSVPMYAEQLVHVVSSLTQ 720
Query: 721 PSDNLLHYCYVHCYLKIFGFQAGLTSLDCSGSYCLPVPVIPSFSTALYGKLLKLPTCWTK 780
PSDNLLHYCYVHCYLKIFGFQAGLTSLDCSGSYCLPVPVIPSFSTALYGKLLKLPTCWTK
Sbjct: 721 PSDNLLHYCYVHCYLKIFGFQAGLTSLDCSGSYCLPVPVIPSFSTALYGKLLKLPTCWTK 780
Query: 781 RSQIAITEGIFELPNLTIQATRAQTLLLQAIYQSWSHLGNVSSSAVIEALINEIFLSIEI 840
RSQIAITEGIFELPNLTIQATRAQTLLLQAIYQSWSHLGNVSSSAVIEALINEIFLSI +
Sbjct: 781 RSQIAITEGIFELPNLTIQATRAQTLLLQAIYQSWSHLGNVSSSAVIEALINEIFLSIGV 840
Query: 841 GS 842
S
Sbjct: 841 KS 842
>gi|119874215 vacuolar protein sorting 13B isoform 4 [Homo sapiens]
Length = 415
Score = 815 bits (2105), Expect = 0.0
Identities = 402/403 (99%), Positives = 403/403 (100%)
Query: 1 MLESYVTPILMSYVNRYIKNLKPSDLQLSLWGGDVVLSKLELKLDVLEQELKLPFTFLSG 60
MLESYVTPILMSYVNRYIKNLKPSDLQLSLWGGDVVLSKLELKLDVLEQELKLPFTFLSG
Sbjct: 1 MLESYVTPILMSYVNRYIKNLKPSDLQLSLWGGDVVLSKLELKLDVLEQELKLPFTFLSG 60
Query: 61 HIHELRIHVPWTKLGSEPVVITINTMECILKLKDGIQDDHESCGSNSTNRSTAESTKSSI 120
HIHELRIHVPWTKLGSEPVVITINTMECILKLKDGIQDDHESCGSNSTNRSTAESTKSSI
Sbjct: 61 HIHELRIHVPWTKLGSEPVVITINTMECILKLKDGIQDDHESCGSNSTNRSTAESTKSSI 120
Query: 121 KPRRMQQAAPTDPDLPPGYVQSLIRRVVNNVNIVINNLILKYVEDDIVLSVNITSAECYT 180
KPRRMQQAAPTDPDLPPGYVQSLIRRVVNNVNIVINNLILKYVEDDIVLSVNITSAECYT
Sbjct: 121 KPRRMQQAAPTDPDLPPGYVQSLIRRVVNNVNIVINNLILKYVEDDIVLSVNITSAECYT 180
Query: 181 VGELWDRAFMDISATDLVLRKVINFSDCTVCLDKRNASGKIEFYQDPLLYKCSFRTRLHF 240
VGELWDRAFMDISATDLVLRKVINFSDCTVCLDKRNASGKIEFYQDPLLYKCSFRTRLHF
Sbjct: 181 VGELWDRAFMDISATDLVLRKVINFSDCTVCLDKRNASGKIEFYQDPLLYKCSFRTRLHF 240
Query: 241 TYENLNSKMPSVIKIHTLVESLKLSITDQQLPMFIRIMQLGIALYYGEIGNFKEGEIEDL 300
TYENLNSKMPSVIKIHTLVESLKLSITDQQLPMFIRIMQLGIALYYGEIGNFKEGEIEDL
Sbjct: 241 TYENLNSKMPSVIKIHTLVESLKLSITDQQLPMFIRIMQLGIALYYGEIGNFKEGEIEDL 300
Query: 301 TCHNKDMLGNITGSEDETRIDMQYPAQHKGQELYSQQDEEQPQGWVSWAWSFVPAIVSYD 360
TCHNKDMLGNITGSEDETRIDMQYPAQHKGQELYSQQDEEQPQGWVSWAWSFVPAIVSYD
Sbjct: 301 TCHNKDMLGNITGSEDETRIDMQYPAQHKGQELYSQQDEEQPQGWVSWAWSFVPAIVSYD 360
Query: 361 DGEEDFVGNDPASTMHQQKAQTLKDPIVSIGFYCTKATVTFKL 403
DGEEDFVGNDPASTMHQQKAQTLKDPIVSIGFYCTKATVTFK+
Sbjct: 361 DGEEDFVGNDPASTMHQQKAQTLKDPIVSIGFYCTKATVTFKV 403
>gi|42544121 vacuolar protein sorting 13C protein isoform 1A [Homo
sapiens]
Length = 3710
Score = 84.0 bits (206), Expect = 6e-16
Identities = 62/213 (29%), Positives = 106/213 (49%), Gaps = 17/213 (7%)
Query: 1 MLESYVTPILMSYVNRYIKNLKPSDLQLSLWGGDVVLSKLELKLDVLEQELKLPFTFLSG 60
+LES V +L ++ Y++NL S L+L +WGG+V L L++K + L EL +PF +G
Sbjct: 2 VLESVVADLLNRFLGDYVENLNKSQLKLGIWGGNVALDNLQIKENAL-SELDVPFKVKAG 60
Query: 61 HIHELRIHVPWTKLGSEPVVITINTMECILKLKDGIQDDHESCGSNSTNRSTAESTKSSI 120
I +L + +PW L E VV T+ + L + G +++ + + + S I
Sbjct: 61 QIDKLTLKIPWKNLYGEAVVATLEGL--YLLVVPGASIKYDAVKEEKSLQDVKQKELSRI 118
Query: 121 KPRRMQQAAPTDPD---LPPGYVQSLIRRVVNNVNIVINNLILKYVEDDIV-----LSVN 172
+ +Q+AA D +V+ L +V+ NV + I ++ +KY EDD+ LS
Sbjct: 119 E-EALQKAAEKDKPKEAKKDTFVEKLATQVIKNVQVKITDIHIKY-EDDVTDPKRPLSFG 176
Query: 173 ITSAE--CYTVGELWDRAFMDISATDLVLRKVI 203
+T E T E W ++ D ++ K+I
Sbjct: 177 VTLGELSLLTANEHWTPCI--LNEADKIIYKLI 207
>gi|66348091 vacuolar protein sorting 13C protein isoform 1B [Homo
sapiens]
Length = 3585
Score = 84.0 bits (206), Expect = 6e-16
Identities = 62/213 (29%), Positives = 106/213 (49%), Gaps = 17/213 (7%)
Query: 1 MLESYVTPILMSYVNRYIKNLKPSDLQLSLWGGDVVLSKLELKLDVLEQELKLPFTFLSG 60
+LES V +L ++ Y++NL S L+L +WGG+V L L++K + L EL +PF +G
Sbjct: 2 VLESVVADLLNRFLGDYVENLNKSQLKLGIWGGNVALDNLQIKENAL-SELDVPFKVKAG 60
Query: 61 HIHELRIHVPWTKLGSEPVVITINTMECILKLKDGIQDDHESCGSNSTNRSTAESTKSSI 120
I +L + +PW L E VV T+ + L + G +++ + + + S I
Sbjct: 61 QIDKLTLKIPWKNLYGEAVVATLEGL--YLLVVPGASIKYDAVKEEKSLQDVKQKELSRI 118
Query: 121 KPRRMQQAAPTDPD---LPPGYVQSLIRRVVNNVNIVINNLILKYVEDDIV-----LSVN 172
+ +Q+AA D +V+ L +V+ NV + I ++ +KY EDD+ LS
Sbjct: 119 E-EALQKAAEKDKPKEAKKDTFVEKLATQVIKNVQVKITDIHIKY-EDDVTDPKRPLSFG 176
Query: 173 ITSAE--CYTVGELWDRAFMDISATDLVLRKVI 203
+T E T E W ++ D ++ K+I
Sbjct: 177 VTLGELSLLTANEHWTPCI--LNEADKIIYKLI 207
>gi|15619008 vacuolar protein sorting 13A isoform B [Homo sapiens]
Length = 3095
Score = 74.3 bits (181), Expect = 4e-13
Identities = 51/219 (23%), Positives = 105/219 (47%), Gaps = 21/219 (9%)
Query: 1 MLESYVTPILMSYVNRYIKNLKPSDLQLSLWGGDVVLSKLELKLDVLEQELKLPFTFLSG 60
+ ES V +L ++ Y+ +L S L L +W G V L L++K + L Q L +PF G
Sbjct: 2 VFESVVVDVLNRFLGDYVVDLDTSQLSLGIWKGAVALKNLQIKENALSQ-LDVPFKVKVG 60
Query: 61 HIHELRIHVPWTKLGSEPVVITINTMECIL----KLK-DGIQDDHESCGSNSTNRSTAES 115
HI L++ +PW L ++PV + + ++ ++K D ++++ + + E
Sbjct: 61 HIGNLKLIIPWKNLYTQPVEAVLEEIYLLIVPSSRIKYDPLKEEKQLMEAKQQELKRIEE 120
Query: 116 TKSSIKPRRMQQAAPTDPDLPPGYVQSLIRRVVNNVNIVINNLILKYVEDDIV------- 168
K + + +Q P D + + L+ +++ N+ + I+++ ++Y EDDI
Sbjct: 121 AKQKVVDQ--EQHLPEKQDT---FAEKLVTQIIKNLQVKISSIHIRY-EDDITNRDKPLS 174
Query: 169 LSVNITSAECYTVGELWDRAFMDISATDLVLRKVINFSD 207
+++ + T + W D T+ ++RK+I +
Sbjct: 175 FGISLQNLSMQTTDQYWVPCLHD--ETEKLVRKLIRLDN 211
>gi|66346676 vacuolar protein sorting 13A isoform D [Homo sapiens]
Length = 3069
Score = 74.3 bits (181), Expect = 4e-13
Identities = 51/219 (23%), Positives = 105/219 (47%), Gaps = 21/219 (9%)
Query: 1 MLESYVTPILMSYVNRYIKNLKPSDLQLSLWGGDVVLSKLELKLDVLEQELKLPFTFLSG 60
+ ES V +L ++ Y+ +L S L L +W G V L L++K + L Q L +PF G
Sbjct: 2 VFESVVVDVLNRFLGDYVVDLDTSQLSLGIWKGAVALKNLQIKENALSQ-LDVPFKVKVG 60
Query: 61 HIHELRIHVPWTKLGSEPVVITINTMECIL----KLK-DGIQDDHESCGSNSTNRSTAES 115
HI L++ +PW L ++PV + + ++ ++K D ++++ + + E
Sbjct: 61 HIGNLKLIIPWKNLYTQPVEAVLEEIYLLIVPSSRIKYDPLKEEKQLMEAKQQELKRIEE 120
Query: 116 TKSSIKPRRMQQAAPTDPDLPPGYVQSLIRRVVNNVNIVINNLILKYVEDDIV------- 168
K + + +Q P D + + L+ +++ N+ + I+++ ++Y EDDI
Sbjct: 121 AKQKVVDQ--EQHLPEKQDT---FAEKLVTQIIKNLQVKISSIHIRY-EDDITNRDKPLS 174
Query: 169 LSVNITSAECYTVGELWDRAFMDISATDLVLRKVINFSD 207
+++ + T + W D T+ ++RK+I +
Sbjct: 175 FGISLQNLSMQTTDQYWVPCLHD--ETEKLVRKLIRLDN 211
>gi|66346674 vacuolar protein sorting 13A isoform A [Homo sapiens]
Length = 3174
Score = 74.3 bits (181), Expect = 4e-13
Identities = 51/219 (23%), Positives = 105/219 (47%), Gaps = 21/219 (9%)
Query: 1 MLESYVTPILMSYVNRYIKNLKPSDLQLSLWGGDVVLSKLELKLDVLEQELKLPFTFLSG 60
+ ES V +L ++ Y+ +L S L L +W G V L L++K + L Q L +PF G
Sbjct: 2 VFESVVVDVLNRFLGDYVVDLDTSQLSLGIWKGAVALKNLQIKENALSQ-LDVPFKVKVG 60
Query: 61 HIHELRIHVPWTKLGSEPVVITINTMECIL----KLK-DGIQDDHESCGSNSTNRSTAES 115
HI L++ +PW L ++PV + + ++ ++K D ++++ + + E
Sbjct: 61 HIGNLKLIIPWKNLYTQPVEAVLEEIYLLIVPSSRIKYDPLKEEKQLMEAKQQELKRIEE 120
Query: 116 TKSSIKPRRMQQAAPTDPDLPPGYVQSLIRRVVNNVNIVINNLILKYVEDDIV------- 168
K + + +Q P D + + L+ +++ N+ + I+++ ++Y EDDI
Sbjct: 121 AKQKVVDQ--EQHLPEKQDT---FAEKLVTQIIKNLQVKISSIHIRY-EDDITNRDKPLS 174
Query: 169 LSVNITSAECYTVGELWDRAFMDISATDLVLRKVINFSD 207
+++ + T + W D T+ ++RK+I +
Sbjct: 175 FGISLQNLSMQTTDQYWVPCLHD--ETEKLVRKLIRLDN 211
>gi|66346672 vacuolar protein sorting 13A isoform C [Homo sapiens]
Length = 3135
Score = 74.3 bits (181), Expect = 4e-13
Identities = 51/219 (23%), Positives = 105/219 (47%), Gaps = 21/219 (9%)
Query: 1 MLESYVTPILMSYVNRYIKNLKPSDLQLSLWGGDVVLSKLELKLDVLEQELKLPFTFLSG 60
+ ES V +L ++ Y+ +L S L L +W G V L L++K + L Q L +PF G
Sbjct: 2 VFESVVVDVLNRFLGDYVVDLDTSQLSLGIWKGAVALKNLQIKENALSQ-LDVPFKVKVG 60
Query: 61 HIHELRIHVPWTKLGSEPVVITINTMECIL----KLK-DGIQDDHESCGSNSTNRSTAES 115
HI L++ +PW L ++PV + + ++ ++K D ++++ + + E
Sbjct: 61 HIGNLKLIIPWKNLYTQPVEAVLEEIYLLIVPSSRIKYDPLKEEKQLMEAKQQELKRIEE 120
Query: 116 TKSSIKPRRMQQAAPTDPDLPPGYVQSLIRRVVNNVNIVINNLILKYVEDDIV------- 168
K + + +Q P D + + L+ +++ N+ + I+++ ++Y EDDI
Sbjct: 121 AKQKVVDQ--EQHLPEKQDT---FAEKLVTQIIKNLQVKISSIHIRY-EDDITNRDKPLS 174
Query: 169 LSVNITSAECYTVGELWDRAFMDISATDLVLRKVINFSD 207
+++ + T + W D T+ ++RK+I +
Sbjct: 175 FGISLQNLSMQTTDQYWVPCLHD--ETEKLVRKLIRLDN 211
>gi|66347845 vacuolar protein sorting 13C protein isoform 2B [Homo
sapiens]
Length = 3628
Score = 71.6 bits (174), Expect = 3e-12
Identities = 66/253 (26%), Positives = 111/253 (43%), Gaps = 54/253 (21%)
Query: 1 MLESYVTPILMSYVNRYIKNLKPSDLQLSLWGGDVVLSKLELKLDVLEQELKLPFTFLSG 60
+LES V +L ++ Y++NL S L+L +WGG+V L L++K + L EL +PF +G
Sbjct: 2 VLESVVADLLNRFLGDYVENLNKSQLKLGIWGGNVALDNLQIKENAL-SELDVPFKVKAG 60
Query: 61 HIHELRIHVPWTKLGSEPVVITINTMECI-----------LKLKDGIQDDHE---SCGSN 106
I +L + +PW L E VV T+ + + +K + +QD + S
Sbjct: 61 QIDKLTLKIPWKNLYGEAVVATLEGLYLLVVPGASIKYDAVKEEKSLQDVKQKELSRIEE 120
Query: 107 STNRSTAESTKS-------------SIKPRRMQ-----------QAAPTDPDLP-----P 137
+ ++ + T S IKP R + + D P
Sbjct: 121 ALQKAAEKGTHSGEFIYGLENFVYKDIKPGRKRKKHKKHFKKPFKGLDRSKDKPKEAKKD 180
Query: 138 GYVQSLIRRVVNNVNIVINNLILKYVEDDIV-----LSVNITSAE--CYTVGELWDRAFM 190
+V+ L +V+ NV + I ++ +KY EDD+ LS +T E T E W
Sbjct: 181 TFVEKLATQVIKNVQVKITDIHIKY-EDDVTDPKRPLSFGVTLGELSLLTANEHWTPCI- 238
Query: 191 DISATDLVLRKVI 203
++ D ++ K+I
Sbjct: 239 -LNEADKIIYKLI 250
>gi|66347828 vacuolar protein sorting 13C protein isoform 2A [Homo
sapiens]
Length = 3753
Score = 71.6 bits (174), Expect = 3e-12
Identities = 66/253 (26%), Positives = 111/253 (43%), Gaps = 54/253 (21%)
Query: 1 MLESYVTPILMSYVNRYIKNLKPSDLQLSLWGGDVVLSKLELKLDVLEQELKLPFTFLSG 60
+LES V +L ++ Y++NL S L+L +WGG+V L L++K + L EL +PF +G
Sbjct: 2 VLESVVADLLNRFLGDYVENLNKSQLKLGIWGGNVALDNLQIKENAL-SELDVPFKVKAG 60
Query: 61 HIHELRIHVPWTKLGSEPVVITINTMECI-----------LKLKDGIQDDHE---SCGSN 106
I +L + +PW L E VV T+ + + +K + +QD + S
Sbjct: 61 QIDKLTLKIPWKNLYGEAVVATLEGLYLLVVPGASIKYDAVKEEKSLQDVKQKELSRIEE 120
Query: 107 STNRSTAESTKS-------------SIKPRRMQ-----------QAAPTDPDLP-----P 137
+ ++ + T S IKP R + + D P
Sbjct: 121 ALQKAAEKGTHSGEFIYGLENFVYKDIKPGRKRKKHKKHFKKPFKGLDRSKDKPKEAKKD 180
Query: 138 GYVQSLIRRVVNNVNIVINNLILKYVEDDIV-----LSVNITSAE--CYTVGELWDRAFM 190
+V+ L +V+ NV + I ++ +KY EDD+ LS +T E T E W
Sbjct: 181 TFVEKLATQVIKNVQVKITDIHIKY-EDDVTDPKRPLSFGVTLGELSLLTANEHWTPCI- 238
Query: 191 DISATDLVLRKVI 203
++ D ++ K+I
Sbjct: 239 -LNEADKIIYKLI 250
>gi|54607141 vacuolar protein sorting 13D isoform 2 [Homo sapiens]
Length = 4363
Score = 64.7 bits (156), Expect = 4e-10
Identities = 47/170 (27%), Positives = 87/170 (51%), Gaps = 10/170 (5%)
Query: 1 MLESYVTPILMSYVNRYIKNLKPSDLQLSLWGGDVVLSKLELKLDVLEQELKLPFTFLSG 60
MLE V +L +Y+ +Y+ NL L ++L G V L L LK D L +EL+LPF +G
Sbjct: 1 MLEGLVAWVLNTYLGKYVNNLNTDQLSVALLKGAVELENLPLKKDAL-KELELPFEVKAG 59
Query: 61 HIHELRIHVPWTKLGSEPVVITINTMECI---LKLKDGIQDDHESCGSNSTNRSTAESTK 117
I ++ + +P+ + +P VI+I+++ I K++D D+ E ++ ++ +
Sbjct: 60 FIGKVTLQIPFYRPHVDPWVISISSLHLIGAPEKIQD-FNDEKEKLLERERKKALLQALE 118
Query: 118 SSIKPRRMQQAAPTDPDLPPGYVQSLIRRVVNNVNIVINNLILKYVEDDI 167
K R Q+ S++ R+V N+ + I ++ L++ ED +
Sbjct: 119 EKWKNDRQQKG----ESYWYSVTASVVTRIVENIELKIQDVHLRF-EDGV 163
>gi|54607139 vacuolar protein sorting 13D isoform 1 [Homo sapiens]
Length = 4388
Score = 64.7 bits (156), Expect = 4e-10
Identities = 47/170 (27%), Positives = 87/170 (51%), Gaps = 10/170 (5%)
Query: 1 MLESYVTPILMSYVNRYIKNLKPSDLQLSLWGGDVVLSKLELKLDVLEQELKLPFTFLSG 60
MLE V +L +Y+ +Y+ NL L ++L G V L L LK D L +EL+LPF +G
Sbjct: 1 MLEGLVAWVLNTYLGKYVNNLNTDQLSVALLKGAVELENLPLKKDAL-KELELPFEVKAG 59
Query: 61 HIHELRIHVPWTKLGSEPVVITINTMECI---LKLKDGIQDDHESCGSNSTNRSTAESTK 117
I ++ + +P+ + +P VI+I+++ I K++D D+ E ++ ++ +
Sbjct: 60 FIGKVTLQIPFYRPHVDPWVISISSLHLIGAPEKIQD-FNDEKEKLLERERKKALLQALE 118
Query: 118 SSIKPRRMQQAAPTDPDLPPGYVQSLIRRVVNNVNIVINNLILKYVEDDI 167
K R Q+ S++ R+V N+ + I ++ L++ ED +
Sbjct: 119 EKWKNDRQQKG----ESYWYSVTASVVTRIVENIELKIQDVHLRF-EDGV 163
>gi|134152667 ICBP90 binding protein 1 [Homo sapiens]
Length = 1440
Score = 55.5 bits (132), Expect = 2e-07
Identities = 58/275 (21%), Positives = 117/275 (42%), Gaps = 36/275 (13%)
Query: 10 LMSYVNRYIKNLKPSDLQLSLWGGDVVLSKLELKLDVLEQELKLP--FTFLSGHIHELRI 67
++ +++R+ KNL P + LS G+ L+ LEL +VL+ L+LP + + I
Sbjct: 9 ILKHLSRFTKNLSPDKINLSTLKGEGQLTNLELDEEVLQNVLELPTWLAITRVYCNRASI 68
Query: 68 HVPWTKLGSEPVVITINTMECILKLKDGIQDDHESCGSNSTNRSTAESTKSSIKPRRMQQ 127
+ WTKL + P+ + ++ +E +K +D G + ++ +S
Sbjct: 69 RIQWTKLKTHPICLCLDKVEVEMKT---CEDPRPPNGQSPIALASGQSE----------- 114
Query: 128 AAPTDPDLPPGYVQSLIRRVVNNVNIVINNLILKYVEDDIVLSVNITSAECYTVGELWDR 187
+VV + I++N++ +K S + + Y+V W +
Sbjct: 115 -------------YGFAEKVVEGMFIIVNSITIKIHSKAFHASFELWQLQGYSVNPNWQQ 161
Query: 188 AFMDIS-ATDLVLRKVINFSDCTVCLDKRNASGKIEFYQDPL---LYKCSFRTRLHFTYE 243
+ + ++ TD +V+ F + T + A QDP+ L + + R+ +
Sbjct: 162 SDLRLTRITDPCRGEVLTFKEITWQTLRIEADATDNGDQDPVTTPLRLITNQGRIQIALK 221
Query: 244 NLNSKMPSVI--KIHTLVESLKLSITDQQLPMFIR 276
+K +VI K+ L++ L +TD QL ++
Sbjct: 222 R-RTKDCNVISSKLMFLLDDLLWVLTDSQLKAMMK 255
>gi|55749659 UHRF1 (ICBP90) binding protein 1-like isoform b [Homo
sapiens]
Length = 522
Score = 53.5 bits (127), Expect = 8e-07
Identities = 38/179 (21%), Positives = 79/179 (44%), Gaps = 29/179 (16%)
Query: 10 LMSYVNRYIKNLKPSDLQLSLWGGDVVLSKLELKLDVLEQELKLPFTFLSGHI--HELRI 67
++ +++R+ KNL P + LS G+ L LEL +VL+ L LP + ++ I
Sbjct: 9 ILKHLSRFTKNLSPDKINLSTLKGEGELKNLELDEEVLQNMLDLPTWLAINKVFCNKASI 68
Query: 68 HVPWTKLGSEPVVITINTMECILKLKDGIQDDHESCGSNSTNRSTAESTKSSIKPRRMQQ 127
+PWTKL + P+ ++++ + I+++ ST E +S P +
Sbjct: 69 RIPWTKLKTHPICLSLD--KVIMEM------------------STCEEPRSPNGPSPIAT 108
Query: 128 AAPTDPDLPPGYVQSLIRRVVNNVNIVINNLILKYVEDDIVLSVNITSAECYTVGELWD 186
A+ +VV +++ +N+++++ S ++ Y+V W+
Sbjct: 109 ASGQSE-------YGFAEKVVEGISVSVNSIVIRIGAKAFNASFELSQLRIYSVNAHWE 160
>gi|55749644 UHRF1 (ICBP90) binding protein 1-like isoform a [Homo
sapiens]
Length = 1464
Score = 53.5 bits (127), Expect = 8e-07
Identities = 38/179 (21%), Positives = 79/179 (44%), Gaps = 29/179 (16%)
Query: 10 LMSYVNRYIKNLKPSDLQLSLWGGDVVLSKLELKLDVLEQELKLPFTFLSGHI--HELRI 67
++ +++R+ KNL P + LS G+ L LEL +VL+ L LP + ++ I
Sbjct: 9 ILKHLSRFTKNLSPDKINLSTLKGEGELKNLELDEEVLQNMLDLPTWLAINKVFCNKASI 68
Query: 68 HVPWTKLGSEPVVITINTMECILKLKDGIQDDHESCGSNSTNRSTAESTKSSIKPRRMQQ 127
+PWTKL + P+ ++++ + I+++ ST E +S P +
Sbjct: 69 RIPWTKLKTHPICLSLD--KVIMEM------------------STCEEPRSPNGPSPIAT 108
Query: 128 AAPTDPDLPPGYVQSLIRRVVNNVNIVINNLILKYVEDDIVLSVNITSAECYTVGELWD 186
A+ +VV +++ +N+++++ S ++ Y+V W+
Sbjct: 109 ASGQSE-------YGFAEKVVEGISVSVNSIVIRIGAKAFNASFELSQLRIYSVNAHWE 160
>gi|226371669 discs large homolog 7 isoform b [Homo sapiens]
Length = 842
Score = 38.5 bits (88), Expect = 0.027
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 828 EALINEIFLSIEIGSCYVAQVDLELLASNDPPTSTS 863
++L E L +GSCYVA+ LE+L S+DP TS S
Sbjct: 795 KSLTTECHLLDSVGSCYVARAGLEVLGSSDPTTSAS 830
>gi|237858668 hypothetical protein LOC123207 isoform d [Homo
sapiens]
Length = 167
Score = 37.7 bits (86), Expect = 0.046
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 824 SAVIEALINEIFLSIEIGSCYVAQVDLELLASNDPPTSTS 863
S V+E +++ L + GSCY+AQ LELLAS+D P S S
Sbjct: 108 SKVLELRKSDVVLD-KTGSCYIAQAGLELLASSDLPASAS 146
>gi|217416386 aarF domain containing kinase 4 isoform b [Homo
sapiens]
Length = 503
Score = 34.3 bits (77), Expect = 0.51
Identities = 31/133 (23%), Positives = 50/133 (37%), Gaps = 20/133 (15%)
Query: 492 TYLTNSLFDYRSPENNGTRAEFILDSTHHKETYTEIAGMQRFGAFYMDYLYTMENTSGKG 551
T LF++R + + A F+ D++ H+ T + + FG + D+ + + G
Sbjct: 311 TLCLRELFEFRFMQTDPNWANFLYDASSHQVTLLDFGASREFGTEFTDHYIEVVKAAADG 370
Query: 552 STNQQDFSSGKSEDLGTVQEKSTKSL----------------VIGPLDFRLDSSAVHRIL 595
+D KS DL + TK+ GP DF +A RI
Sbjct: 371 ---DRDCVLQKSRDLKFLTGFETKAFSDAHVEAVMILGEPFATQGPYDFGSGETA-RRIQ 426
Query: 596 KMIVCALEHEYEP 608
+I L H P
Sbjct: 427 DLIPVLLRHRLCP 439
>gi|27363457 aarF domain containing kinase 4 isoform a [Homo
sapiens]
Length = 544
Score = 34.3 bits (77), Expect = 0.51
Identities = 31/133 (23%), Positives = 50/133 (37%), Gaps = 20/133 (15%)
Query: 492 TYLTNSLFDYRSPENNGTRAEFILDSTHHKETYTEIAGMQRFGAFYMDYLYTMENTSGKG 551
T LF++R + + A F+ D++ H+ T + + FG + D+ + + G
Sbjct: 352 TLCLRELFEFRFMQTDPNWANFLYDASSHQVTLLDFGASREFGTEFTDHYIEVVKAAADG 411
Query: 552 STNQQDFSSGKSEDLGTVQEKSTKSL----------------VIGPLDFRLDSSAVHRIL 595
+D KS DL + TK+ GP DF +A RI
Sbjct: 412 ---DRDCVLQKSRDLKFLTGFETKAFSDAHVEAVMILGEPFATQGPYDFGSGETA-RRIQ 467
Query: 596 KMIVCALEHEYEP 608
+I L H P
Sbjct: 468 DLIPVLLRHRLCP 480
>gi|54112407 protein kinase CHK2 isoform c [Homo sapiens]
Length = 586
Score = 33.5 bits (75), Expect = 0.87
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 835 FLSIEIGSCYVAQVDLELLASNDPPTSTS 863
F ++E S +V Q DLELL S+DPP S S
Sbjct: 103 FANLETESGHVTQSDLELLLSSDPPASAS 131
>gi|62243734 signal transducing adaptor family member 2 isoform 1
[Homo sapiens]
Length = 449
Score = 33.5 bits (75), Expect = 0.87
Identities = 16/26 (61%), Positives = 19/26 (73%)
Query: 838 IEIGSCYVAQVDLELLASNDPPTSTS 863
+E G +VAQ LELL S+DPPTS S
Sbjct: 358 VEKGFHHVAQAGLELLTSSDPPTSAS 383
>gi|14211935 testes development-related NYD-SP18 [Homo sapiens]
Length = 344
Score = 32.7 bits (73), Expect = 1.5
Identities = 21/77 (27%), Positives = 34/77 (44%)
Query: 196 DLVLRKVINFSDCTVCLDKRNASGKIEFYQDPLLYKCSFRTRLHFTYENLNSKMPSVIKI 255
DL + ++F +N+SGK +D + C R R FTY + PS ++
Sbjct: 262 DLHQQNQLSFRSSRKVETNKNSSGKDSSREDSIPCTCDLRWRASFTYGEWERENPSGLQP 321
Query: 256 HTLVESLKLSITDQQLP 272
+L+ +L S Q P
Sbjct: 322 LSLLSTLAASTGPQLAP 338
>gi|169216486 PREDICTED: hCG_1742852 [Homo sapiens]
Length = 402
Score = 32.3 bits (72), Expect = 1.9
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 7/50 (14%)
Query: 814 SWSHLGNVSSSAVIEALINEIFLSIEIGSCYVAQVDLELLASNDPPTSTS 863
SW + S A L+ +FL ++ Q LELL S DPPTS S
Sbjct: 337 SWDYSHAPSRPANFVVLVETVFLHVD-------QAGLELLISGDPPTSAS 379
>gi|169216528 PREDICTED: hCG_1742852 [Homo sapiens]
Length = 402
Score = 32.3 bits (72), Expect = 1.9
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 7/50 (14%)
Query: 814 SWSHLGNVSSSAVIEALINEIFLSIEIGSCYVAQVDLELLASNDPPTSTS 863
SW + S A L+ +FL ++ Q LELL S DPPTS S
Sbjct: 337 SWDYSHAPSRPANFVVLVETVFLHVD-------QAGLELLISGDPPTSAS 379
>gi|239747074 PREDICTED: hypothetical protein XP_002343911 [Homo
sapiens]
Length = 402
Score = 32.3 bits (72), Expect = 1.9
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 7/50 (14%)
Query: 814 SWSHLGNVSSSAVIEALINEIFLSIEIGSCYVAQVDLELLASNDPPTSTS 863
SW + S A L+ +FL ++ Q LELL S DPPTS S
Sbjct: 337 SWGYSHAPSRPANFVVLVETVFLHVD-------QAGLELLISGDPPTSAS 379
>gi|169216761 PREDICTED: hCG_1742852 [Homo sapiens]
Length = 402
Score = 32.3 bits (72), Expect = 1.9
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 7/50 (14%)
Query: 814 SWSHLGNVSSSAVIEALINEIFLSIEIGSCYVAQVDLELLASNDPPTSTS 863
SW + S A L+ +FL ++ Q LELL S DPPTS S
Sbjct: 337 SWGYSHAPSRPANFVVLVETVFLHVD-------QAGLELLISGDPPTSAS 379
>gi|28212280 hypothetical protein LOC283579 [Homo sapiens]
Length = 122
Score = 32.3 bits (72), Expect = 1.9
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 839 EIGSCYVAQVDLELLASNDPPTSTS 863
E+GS Y AQ LELL S++PP S S
Sbjct: 30 EMGSHYFAQAGLELLGSSNPPASAS 54
>gi|219689113 two pore segment channel 1 isoform 1 [Homo sapiens]
Length = 888
Score = 32.0 bits (71), Expect = 2.5
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 842 SCYVAQVDLELLASNDPPTSTS 863
SCY+AQ LELL S+ PT TS
Sbjct: 3 SCYIAQAGLELLGSSSSPTLTS 24
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.134 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,430,718
Number of Sequences: 37866
Number of extensions: 1382391
Number of successful extensions: 3290
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 3213
Number of HSP's gapped (non-prelim): 79
length of query: 863
length of database: 18,247,518
effective HSP length: 111
effective length of query: 752
effective length of database: 14,044,392
effective search space: 10561382784
effective search space used: 10561382784
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.