PODXL 26226

Name: PODXL	Sequence: fasta or formatted (526aa)		NCBI GI: 33598950
Description: podocalyxin-like isoform 2 precursor		Referenced in: Kidney Additional Host Defense Functions
Other entries for this name: alt prot [558aa] podocalyxin-like isoform 1 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.8 41 2 C cysteine 1.5 8 2 D aspartate 4.6 24 2 E glutamate 5.5 29 3 F phenylalanine 0.8 4 1 G glycine 4.8 25 3 H histidine 2.3 12 1 I isoleucine 2.9 15 2 K lysine 4.9 26 2 L leucine 8.7 46 5 M methionine 2.1 11 1 N asparagine 3.0 16 1 P proline 8.2 43 2 Q glutamine 4.9 26 2 R arginine 2.5 13 1 S serine 13.5 71 5 T threonine 15.0 79 3 V valine 5.5 29 3 W tryptophan 0.6 3 1 Y tyrosine 1.0 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 podocalyxin-like isoform 2 precursor PODXL 0.980 podocalyxin-like isoform 1 precursor MUC2 0.075 mucin 2 precursor LOC100294420 0.066 PREDICTED: similar to mucin 2 LOC729792 0.066 PREDICTED: hypothetical protein LOC729792 0.066 PREDICTED: hypothetical protein LOC729792 0.066 PREDICTED: hypothetical protein LOC100294501 0.066 PREDICTED: hypothetical protein LOC100294238 0.066 PREDICTED: hypothetical protein LOC100294204 0.066 PREDICTED: hypothetical protein LOC100294136 0.066 PREDICTED: hypothetical protein LOC100294091 0.066 PREDICTED: hypothetical protein LOC730401 0.066 PREDICTED: hypothetical protein MUC5AC 0.066 mucin 5AC LOC100294249 0.064 PREDICTED: hypothetical protein XP_002344067 MUC5B 0.061 mucin 5, subtype B, tracheobronchial LOC100130716 0.058 PREDICTED: similar to mucin 11 MUC6 0.056 mucin 6, gastric MUC12 0.056 PREDICTED: mucin 12 MUC12 0.056 PREDICTED: mucin 12, cell surface associated MUC17 0.053 mucin 17 MUC21 0.053 mucin 21 MUC7 0.051 mucin 7, secreted precursor MUC7 0.051 mucin 7, secreted precursor MUC7 0.051 mucin 7, secreted precursor LOC100131514 0.050 PREDICTED: similar to intestinal mucin MUC3B LOC284297 0.050 hypothetical protein LOC284297 LOC100133790 0.050 PREDICTED: intestinal mucin-like, partial POLR2A 0.050 DNA-directed RNA polymerase II A MUC4 0.049 mucin 4 isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.