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Search of human proteins with 33589861
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|33589861 RAB31, member RAS oncogene family [Homo sapiens]
(195 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|33589861 RAB31, member RAS oncogene family [Homo sapiens] 400 e-112
gi|10190714 RAS-related protein RAB-22A [Homo sapiens] 276 1e-74
gi|19923262 RAB5A, member RAS oncogene family [Homo sapiens] 185 2e-47
gi|41393614 RAB5C, member RAS oncogene family isoform a [Homo sa... 181 5e-46
gi|41393545 RAB5C, member RAS oncogene family isoform b [Homo sa... 181 5e-46
gi|4506371 RAB5B, member RAS oncogene family [Homo sapiens] 177 7e-45
gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo sap... 151 3e-37
gi|19923231 RAB6A, member RAS oncogene family isoform a [Homo sa... 150 9e-37
gi|116812567 RAB25 [Homo sapiens] 149 1e-36
gi|7661922 RAB21, member RAS oncogene family [Homo sapiens] 149 1e-36
gi|38679888 RAB6A, member RAS oncogene family isoform b [Homo sa... 147 7e-36
gi|96975097 RAB6B, member RAS oncogene family [Homo sapiens] 147 7e-36
gi|4758984 Ras-related protein Rab-11A [Homo sapiens] 146 1e-35
gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens] 145 2e-35
gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens] 145 2e-35
gi|117938299 RAB6C-like [Homo sapiens] 144 6e-35
gi|11967981 RAB17, member RAS oncogene family [Homo sapiens] 143 1e-34
gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens] 140 9e-34
gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens] 139 1e-33
gi|116875763 RAB6C, member RAS oncogene family [Homo sapiens] 139 2e-33
gi|4506363 RAB13, member RAS oncogene family [Homo sapiens] 138 3e-33
gi|21361418 RAB30, member RAS oncogene family [Homo sapiens] 137 8e-33
gi|16933567 mel transforming oncogene [Homo sapiens] 136 1e-32
gi|74096429 RAB41, member RAS oncogene family [Homo sapiens] 135 2e-32
gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens] 135 2e-32
gi|10880989 RAB18, member RAS oncogene family [Homo sapiens] 134 5e-32
gi|21361884 RAB2B protein isoform 1 [Homo sapiens] 134 6e-32
gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene fa... 134 6e-32
gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens] 134 6e-32
gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens] 134 6e-32
>gi|33589861 RAB31, member RAS oncogene family [Homo sapiens]
Length = 195
Score = 400 bits (1027), Expect = e-112
Identities = 195/195 (100%), Positives = 195/195 (100%)
Query: 1 MMAIRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIW 60
MMAIRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIW
Sbjct: 1 MMAIRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIW 60
Query: 61 DTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNK 120
DTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNK
Sbjct: 61 DTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNK 120
Query: 121 CDLSDIREVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHENGNNGT 180
CDLSDIREVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHENGNNGT
Sbjct: 121 CDLSDIREVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHENGNNGT 180
Query: 181 IKVEKPTMQASRRCC 195
IKVEKPTMQASRRCC
Sbjct: 181 IKVEKPTMQASRRCC 195
>gi|10190714 RAS-related protein RAB-22A [Homo sapiens]
Length = 194
Score = 276 bits (705), Expect = 1e-74
Identities = 138/194 (71%), Positives = 158/194 (81%)
Query: 2 MAIRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWD 61
MA+RELKVCLLGDTGVGKSSIV RFV+D FD NI+PTIGASFMTKTV NELHKFLIWD
Sbjct: 1 MALRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWD 60
Query: 62 TAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKC 121
TAGQERF +LAPMYYRGSAAA+IVYDITK+++F TLK WVKEL++HGP NIV+AIAGNKC
Sbjct: 61 TAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKC 120
Query: 122 DLSDIREVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHENGNNGTI 181
DL D+REV +DAK+YA+SI AI VETSAKNAINI ELF ISR+IP D +
Sbjct: 121 DLIDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDANLPSGGKGF 180
Query: 182 KVEKPTMQASRRCC 195
K+ + + R CC
Sbjct: 181 KLRRQPSEPKRSCC 194
>gi|19923262 RAB5A, member RAS oncogene family [Homo sapiens]
Length = 215
Score = 185 bits (470), Expect = 2e-47
Identities = 90/196 (45%), Positives = 131/196 (66%), Gaps = 4/196 (2%)
Query: 4 IRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTA 63
I + K+ LLG++ VGKSS+V RFV+ F TIGA+F+T+TV + KF IWDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 64 GQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDL 123
GQER+HSLAPMYYRG+ AA++VYDIT ++SF K WVKEL+ NIV+A++GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 137
Query: 124 SDIREVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHENGNNGT--- 180
++ R V ++A+ YA+ + +ETSAK ++N+ E+F I++++P +P G N
Sbjct: 138 ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSARGR 197
Query: 181 -IKVEKPTMQASRRCC 195
+ + +PT +CC
Sbjct: 198 GVDLTEPTQPTRNQCC 213
>gi|41393614 RAB5C, member RAS oncogene family isoform a [Homo
sapiens]
Length = 216
Score = 181 bits (458), Expect = 5e-46
Identities = 90/196 (45%), Positives = 129/196 (65%), Gaps = 4/196 (2%)
Query: 4 IRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTA 63
I + K+ LLG++ VGKSS+V RFV+ F TIGA+F+T+TV + KF IWDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 78
Query: 64 GQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDL 123
GQER+HSLAPMYYRG+ AA++VYDIT D+F K WVKEL+ NIV+A+AGNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADL 138
Query: 124 SDIREVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHE----NGNNG 179
+ R V ++A+ YA+ + +ETSAK A+N+ E+F I++++P +P G N
Sbjct: 139 ASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPGRNR 198
Query: 180 TIKVEKPTMQASRRCC 195
+ +++ + +CC
Sbjct: 199 GVDLQENNPASRSQCC 214
>gi|41393545 RAB5C, member RAS oncogene family isoform b [Homo
sapiens]
Length = 216
Score = 181 bits (458), Expect = 5e-46
Identities = 90/196 (45%), Positives = 129/196 (65%), Gaps = 4/196 (2%)
Query: 4 IRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTA 63
I + K+ LLG++ VGKSS+V RFV+ F TIGA+F+T+TV + KF IWDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 78
Query: 64 GQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDL 123
GQER+HSLAPMYYRG+ AA++VYDIT D+F K WVKEL+ NIV+A+AGNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADL 138
Query: 124 SDIREVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHE----NGNNG 179
+ R V ++A+ YA+ + +ETSAK A+N+ E+F I++++P +P G N
Sbjct: 139 ASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPGRNR 198
Query: 180 TIKVEKPTMQASRRCC 195
+ +++ + +CC
Sbjct: 199 GVDLQENNPASRSQCC 214
>gi|4506371 RAB5B, member RAS oncogene family [Homo sapiens]
Length = 215
Score = 177 bits (448), Expect = 7e-45
Identities = 88/196 (44%), Positives = 131/196 (66%), Gaps = 4/196 (2%)
Query: 4 IRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTA 63
I + K+ LLG++ VGKSS+V RFV+ F TIGA+F+T++V + KF IWDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTA 77
Query: 64 GQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDL 123
GQER+HSLAPMYYRG+ AA++VYDIT Q++F K WVKEL+ +IV+A+AGNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADL 137
Query: 124 SDIREVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHE----NGNNG 179
++ R V ++A+ YA+ + +ETSAK A+N+ +LF I++++P +P G +
Sbjct: 138 ANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAGRSR 197
Query: 180 TIKVEKPTMQASRRCC 195
+ + + + Q +CC
Sbjct: 198 GVDLHEQSQQNKSQCC 213
>gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo
sapiens]
Length = 205
Score = 151 bits (382), Expect = 3e-37
Identities = 74/193 (38%), Positives = 114/193 (59%), Gaps = 5/193 (2%)
Query: 8 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQER 67
K+ L+GD+GVGKS ++ RF D + + TIG F +T+ + K IWDTAGQER
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 72
Query: 68 FHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIR 127
F ++ YYRG+ ++VYD+T Q+SF +K+W++E+ + EN+ + GNKCDL+ +
Sbjct: 73 FRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKK 132
Query: 128 EVPLKDAKEYAESIGAIVVETSAKNAINIEELFQ----GISRQIPPLDPHENGNNGTIKV 183
V AKE+A+S+G +ETSAKNA N+E+ F I +++ P +K+
Sbjct: 133 VVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKI 192
Query: 184 EK-PTMQASRRCC 195
+ P Q+ CC
Sbjct: 193 QSTPVKQSGGGCC 205
>gi|19923231 RAB6A, member RAS oncogene family isoform a [Homo
sapiens]
Length = 208
Score = 150 bits (378), Expect = 9e-37
Identities = 71/189 (37%), Positives = 120/189 (63%), Gaps = 3/189 (1%)
Query: 4 IRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTA 63
+R+ K+ LG+ VGK+S++ RF+ D FD+ TIG F++KT+ + + +WDTA
Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTA 70
Query: 64 GQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDL 123
GQERF SL P Y R SAAAV+VYDIT +SF KW+ +++ ++++ + GNK DL
Sbjct: 71 GQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDL 130
Query: 124 SDIREVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHENGNNG---T 180
+D R+V +++ + A+ + + +ETSAK N+++LF+ ++ +P ++ ++ +
Sbjct: 131 ADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDMID 190
Query: 181 IKVEKPTMQ 189
IK+EKP Q
Sbjct: 191 IKLEKPQEQ 199
>gi|116812567 RAB25 [Homo sapiens]
Length = 213
Score = 149 bits (376), Expect = 1e-36
Identities = 67/160 (41%), Positives = 109/160 (68%)
Query: 8 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQER 67
KV L+G++GVGK++++ RF ++ F H+ TIG F T+TV G K IWDTAG ER
Sbjct: 14 KVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLER 73
Query: 68 FHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIR 127
+ ++ YYRG+ A++V+D+TK ++ +++W+KEL +H IV+ + GNK DLS R
Sbjct: 74 YRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAR 133
Query: 128 EVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 167
EVP ++A+ +AE+ G + +ETSA ++ N+E F+ + ++I
Sbjct: 134 EVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEI 173
>gi|7661922 RAB21, member RAS oncogene family [Homo sapiens]
Length = 225
Score = 149 bits (376), Expect = 1e-36
Identities = 79/176 (44%), Positives = 110/176 (62%), Gaps = 3/176 (1%)
Query: 8 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQER 67
KV LLG+ VGK+S+V R+ ++ F+ T+ ASF+TK + G + IWDTAGQER
Sbjct: 21 KVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQER 80
Query: 68 FHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIR 127
FH+L P+YYR S A++VYDIT +DSF +K WVKEL++ I + I GNK DL R
Sbjct: 81 FHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKER 140
Query: 128 EVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI---PPLDPHENGNNGT 180
V +++A+ YAES+GA TSAK IEELF + +++ +D GN +
Sbjct: 141 HVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSS 196
>gi|38679888 RAB6A, member RAS oncogene family isoform b [Homo
sapiens]
Length = 208
Score = 147 bits (370), Expect = 7e-36
Identities = 69/189 (36%), Positives = 118/189 (62%), Gaps = 3/189 (1%)
Query: 4 IRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTA 63
+R+ K+ LG+ VGK+S++ RF+ D FD+ TIG F++KT+ + + +WDTA
Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 70
Query: 64 GQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDL 123
GQERF SL P Y R S AV+VYDIT +SF KW+ +++ ++++ + GNK DL
Sbjct: 71 GQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDL 130
Query: 124 SDIREVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHENGNNG---T 180
+D R+V +++ + A+ + + +ETSAK N+++LF+ ++ +P ++ ++ +
Sbjct: 131 ADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDMID 190
Query: 181 IKVEKPTMQ 189
IK+EKP Q
Sbjct: 191 IKLEKPQEQ 199
>gi|96975097 RAB6B, member RAS oncogene family [Homo sapiens]
Length = 208
Score = 147 bits (370), Expect = 7e-36
Identities = 68/186 (36%), Positives = 117/186 (62%), Gaps = 3/186 (1%)
Query: 4 IRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTA 63
+R+ K+ LG+ VGK+S++ RF+ D FD+ TIG F++KT+ + + +WDTA
Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 70
Query: 64 GQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDL 123
GQERF SL P Y R S AV+VYDIT +SF KW+ +++ ++++ + GNK DL
Sbjct: 71 GQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDL 130
Query: 124 SDIREVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLD-PHENGNNG--T 180
+D R++ +++ ++ A+ + + +ETSAK N+++LF+ ++ +P ++ E G
Sbjct: 131 ADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKSKEGMID 190
Query: 181 IKVEKP 186
IK++KP
Sbjct: 191 IKLDKP 196
>gi|4758984 Ras-related protein Rab-11A [Homo sapiens]
Length = 216
Score = 146 bits (369), Expect = 1e-35
Identities = 68/160 (42%), Positives = 105/160 (65%)
Query: 8 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQER 67
KV L+GD+GVGKS+++ RF ++ F+ TIG F T+++ + K IWDTAGQER
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 72
Query: 68 FHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIR 127
+ ++ YYRG+ A++VYDI K ++ +++W+KEL++H NIV+ + GNK DL +R
Sbjct: 73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLR 132
Query: 128 EVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 167
VP +A+ +AE G +ETSA ++ N+E FQ I +I
Sbjct: 133 AVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEI 172
>gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens]
Length = 218
Score = 145 bits (367), Expect = 2e-35
Identities = 67/160 (41%), Positives = 105/160 (65%)
Query: 8 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQER 67
KV L+GD+GVGKS+++ RF ++ F+ TIG F T+++ + K IWDTAGQER
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 72
Query: 68 FHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIR 127
+ ++ YYRG+ A++VYDI K ++ +++W+KEL++H NIV+ + GNK DL +R
Sbjct: 73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLR 132
Query: 128 EVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 167
VP +A+ +AE +ETSA ++ N+EE F+ I +I
Sbjct: 133 AVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEI 172
>gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]
Length = 201
Score = 145 bits (367), Expect = 2e-35
Identities = 73/192 (38%), Positives = 114/192 (59%), Gaps = 4/192 (2%)
Query: 8 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQER 67
K+ L+GD+GVGKS ++ RF D + + TIG F +T+ + K IWDTAGQER
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 69
Query: 68 FHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIR 127
F ++ YYRG+ ++VYD+T Q+S+ +K+W++E+ + EN+ + GNK DL+ +
Sbjct: 70 FRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKK 129
Query: 128 EVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPP-LDP--HENGNNGTIKVE 184
V AKE+A+S+G +ETSAKNA N+E+ F ++ +I + P G +K++
Sbjct: 130 VVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGERPNLKID 189
Query: 185 K-PTMQASRRCC 195
P A CC
Sbjct: 190 STPVKPAGGGCC 201
>gi|117938299 RAB6C-like [Homo sapiens]
Length = 254
Score = 144 bits (362), Expect = 6e-35
Identities = 69/189 (36%), Positives = 115/189 (60%), Gaps = 3/189 (1%)
Query: 4 IRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTA 63
+R+ K+ LG+ V K+S++ RF D FD+ IG F++KT+ + +WDTA
Sbjct: 11 LRKFKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDGTIGLRLWDTA 70
Query: 64 GQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDL 123
GQER SL P Y R SAAAV+VYDIT +SF KW+ +++ G ++++ + GNK DL
Sbjct: 71 GQERLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTEGGSDVIITLVGNKTDL 130
Query: 124 SDIREVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHENGNN---GT 180
+D R+V +++ + A+ + +ET AK N+++LF+ ++ +P ++ ++G+
Sbjct: 131 ADKRQVSIEEGERKAKGLNVTFIETRAKAGYNVKQLFRRVAAALPGMESTQDGSREDMSD 190
Query: 181 IKVEKPTMQ 189
IK+EKP Q
Sbjct: 191 IKLEKPQEQ 199
>gi|11967981 RAB17, member RAS oncogene family [Homo sapiens]
Length = 212
Score = 143 bits (360), Expect = 1e-34
Identities = 78/196 (39%), Positives = 121/196 (61%), Gaps = 8/196 (4%)
Query: 5 RELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAG 64
R K+ LLG VGKSS+ R+V++ F +I PT+G +F TK V G K IWDTAG
Sbjct: 18 RVFKLVLLGSGSVGKSSLALRYVKNDFK-SILPTVGCAFFTKVVDVGATSLKLEIWDTAG 76
Query: 65 QERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEH-GPENIVMAIAGNKCDL 123
QE++HS+ +Y+RG+ AA++VYDIT++DSF ++W+K+L+E P +++ + GNK DL
Sbjct: 77 QEKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWLKDLEEELHPGEVLVMLVGNKTDL 136
Query: 124 SDIREVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHE----NGNNG 179
S REV ++ KE+A+S + +ETSAK + E+F +++++ E G+
Sbjct: 137 SQEREVTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQELLQRSDEEGQALRGDAA 196
Query: 180 TIKVEKPTMQASRRCC 195
+ P QA +CC
Sbjct: 197 VALNKGPARQA--KCC 210
>gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens]
Length = 207
Score = 140 bits (352), Expect = 9e-34
Identities = 69/182 (37%), Positives = 108/182 (59%), Gaps = 6/182 (3%)
Query: 8 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQER 67
K+ L+GD+GVGK+ ++ RF +D F+ TIG F +T+ + K IWDTAGQER
Sbjct: 10 KLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQER 69
Query: 68 FHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIR 127
F ++ YYRG+ ++VYDIT + SF +K W++ ++EH ++ I GNKCD++D R
Sbjct: 70 FRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKR 129
Query: 128 EVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPL------DPHENGNNGTI 181
+V + ++ A G +ETSAK++ N+EE F ++R I D + G G +
Sbjct: 130 QVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIMTKLNRKMNDSNSAGAGGPV 189
Query: 182 KV 183
K+
Sbjct: 190 KI 191
>gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens]
Length = 200
Score = 139 bits (351), Expect = 1e-33
Identities = 77/192 (40%), Positives = 104/192 (54%), Gaps = 6/192 (3%)
Query: 8 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQER 67
K+ L+GD+GVGK+ ++ RF D F+ TIG F KTV + K IWDTAGQER
Sbjct: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70
Query: 68 FHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIR 127
FH++ YYRG+ ++VYDIT SF + KW++ + EH E++ + GNKCD+ D R
Sbjct: 71 FHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKR 130
Query: 128 EVPLKDAKEYAESIGAIVVETSAKNAINIEELF----QGISRQIPPLDPHENGNNGTIKV 183
VP + A G ETSAK INIE+ F + I R+ P +P N N I
Sbjct: 131 VVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEP--NSENVDISS 188
Query: 184 EKPTMQASRRCC 195
+CC
Sbjct: 189 GGGVTGWKSKCC 200
>gi|116875763 RAB6C, member RAS oncogene family [Homo sapiens]
Length = 254
Score = 139 bits (350), Expect = 2e-33
Identities = 67/189 (35%), Positives = 114/189 (60%), Gaps = 3/189 (1%)
Query: 4 IRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTA 63
+R+ K+ LG+ V K+S++ RF D FD+ IG F++KT+ + +WDTA
Sbjct: 11 LRKFKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDGTIGLRLWDTA 70
Query: 64 GQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDL 123
GQER SL P Y R SAAAV+VYDIT +SF KW+ +++ ++++ + GN+ DL
Sbjct: 71 GQERLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIITLVGNRTDL 130
Query: 124 SDIREVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHENGNN---GT 180
+D R+V +++ + A+ + +ET AK N+++LF+ ++ +P ++ ++G+
Sbjct: 131 ADKRQVSVEEGERKAKGLNVTFIETRAKAGYNVKQLFRRVAAALPGMESTQDGSREDMSD 190
Query: 181 IKVEKPTMQ 189
IK+EKP Q
Sbjct: 191 IKLEKPQEQ 199
>gi|4506363 RAB13, member RAS oncogene family [Homo sapiens]
Length = 203
Score = 138 bits (347), Expect = 3e-33
Identities = 63/160 (39%), Positives = 100/160 (62%)
Query: 8 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQER 67
K+ L+GD+GVGK+ ++ RF +D+F++ TIG F +TV + K +WDTAGQER
Sbjct: 10 KLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQER 69
Query: 68 FHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIR 127
F ++ YYRG+ ++VYDIT + SF ++ W+K +KE+ + + GNKCD+ R
Sbjct: 70 FKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKR 129
Query: 128 EVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 167
+V + A + A G ETSAK+++N++E F ++R I
Sbjct: 130 KVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 169
>gi|21361418 RAB30, member RAS oncogene family [Homo sapiens]
Length = 203
Score = 137 bits (344), Expect = 8e-33
Identities = 66/153 (43%), Positives = 98/153 (64%)
Query: 8 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQER 67
K+ L+G+ GVGK+ +V RF Q F TIG FM KTV E K IWDTAGQER
Sbjct: 11 KIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQER 70
Query: 68 FHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIR 127
F S+ YYR + A ++ YDIT ++SF L +W++E++++ ++ + GNK DL++ R
Sbjct: 71 FRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERR 130
Query: 128 EVPLKDAKEYAESIGAIVVETSAKNAINIEELF 160
EV + A+E++E+ +ETSAK + N+E+LF
Sbjct: 131 EVSQQRAEEFSEAQDMYYLETSAKESDNVEKLF 163
>gi|16933567 mel transforming oncogene [Homo sapiens]
Length = 207
Score = 136 bits (343), Expect = 1e-32
Identities = 67/172 (38%), Positives = 104/172 (60%), Gaps = 1/172 (0%)
Query: 8 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQER 67
K+ L+GD+GVGK+ ++ RF +D F+ TIG F +T+ + K IWDTAGQER
Sbjct: 10 KLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQER 69
Query: 68 FHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIR 127
F ++ YYRG+ ++VYDIT + SF ++ W++ ++EH ++ I GNKCD++D R
Sbjct: 70 FRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKR 129
Query: 128 EVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI-PPLDPHENGNN 178
+V + ++ A G +ETSAK IN+E F ++R I +D GN+
Sbjct: 130 QVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNS 181
>gi|74096429 RAB41, member RAS oncogene family [Homo sapiens]
Length = 222
Score = 135 bits (341), Expect = 2e-32
Identities = 65/184 (35%), Positives = 111/184 (60%)
Query: 8 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQER 67
K+ LG+ VGK+SI+ RF+ + F T+G F++KT+ +++ + +WDTAGQER
Sbjct: 33 KLLFLGEQSVGKTSIISRFMYNSFGCACQATVGIDFLSKTMYLEDQIVQLQLWDTAGQER 92
Query: 68 FHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIR 127
FHSL P Y R S AV+VYDIT +SF KWV+ ++ +++V+ + GNK DL + R
Sbjct: 93 FHSLIPSYIRDSTIAVVVYDITNINSFKETDKWVEHVRAERGDDVVIMLLGNKIDLDNKR 152
Query: 128 EVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHENGNNGTIKVEKPT 187
+V + +E + ++ + +ETSAK N+++LF+ ++ + GT+++E +
Sbjct: 153 QVTAEQGEEKSRNLNVMFIETSAKTGYNVKKLFRRVASALLSTRTSPPPKEGTVEIELES 212
Query: 188 MQAS 191
+ S
Sbjct: 213 FEES 216
>gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens]
Length = 212
Score = 135 bits (340), Expect = 2e-32
Identities = 66/160 (41%), Positives = 98/160 (61%)
Query: 8 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQER 67
K ++GDTGVGKS ++ +F F TIG F + + + K IWDTAGQE
Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQES 67
Query: 68 FHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIR 127
F S+ YYRG+A A++VYDIT++D+F L W+++ ++H N+V+ + GNK DL R
Sbjct: 68 FRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRR 127
Query: 128 EVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 167
EV ++ + +A G I +ETSAK A N+EE F +++I
Sbjct: 128 EVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEI 167
>gi|10880989 RAB18, member RAS oncogene family [Homo sapiens]
Length = 206
Score = 134 bits (337), Expect = 5e-32
Identities = 72/192 (37%), Positives = 106/192 (55%), Gaps = 5/192 (2%)
Query: 7 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 66
LK+ ++G++GVGKSS++ RF D FD ++ TIG F KT+ K IWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 67 RFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPEN-IVMAIAGNKCDLSD 125
RF +L P YYRG+ ++VYD+T++D+F L W+ EL+ + N IV + GNK D +
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKID-KE 127
Query: 126 IREVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI---PPLDPHENGNNGTIK 182
REV + ++A + +E SAK ++ F+ + +I P L EN N G
Sbjct: 128 NREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNKGVKL 187
Query: 183 VEKPTMQASRRC 194
+ Q C
Sbjct: 188 SHREEGQGGGAC 199
>gi|21361884 RAB2B protein isoform 1 [Homo sapiens]
Length = 216
Score = 134 bits (336), Expect = 6e-32
Identities = 65/160 (40%), Positives = 98/160 (61%)
Query: 8 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQER 67
K ++GDTGVGKS ++ +F F TIG F + V + K IWDTAGQE
Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQES 67
Query: 68 FHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIR 127
F S+ YYRG+A A++VYDIT++++F L W+++ ++H N+V+ + GNK DL R
Sbjct: 68 FRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRR 127
Query: 128 EVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 167
+V ++ + +A G I +ETSAK A N+EE F +++I
Sbjct: 128 DVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEI 167
>gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene
family [Homo sapiens]
Length = 327
Score = 134 bits (336), Expect = 6e-32
Identities = 61/160 (38%), Positives = 98/160 (61%)
Query: 8 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQER 67
K+ L+GD+GVGK+ ++ RF +D+F++ TIG F +TV + K +WDTAGQER
Sbjct: 134 KLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQER 193
Query: 68 FHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIR 127
F ++ YYRG+ ++ YDIT + SF ++ W+K + E+ + + GNKCD+ R
Sbjct: 194 FKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKCDMEAKR 253
Query: 128 EVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 167
+V + A + A G ETSAK+++N++E F ++R I
Sbjct: 254 KVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 293
>gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens]
Length = 327
Score = 134 bits (336), Expect = 6e-32
Identities = 61/160 (38%), Positives = 98/160 (61%)
Query: 8 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQER 67
K+ L+GD+GVGK+ ++ RF +D+F++ TIG F +TV + K +WDTAGQER
Sbjct: 134 KLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQER 193
Query: 68 FHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIR 127
F ++ YYRG+ ++ YDIT + SF ++ W+K + E+ + + GNKCD+ R
Sbjct: 194 FKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKCDMEAKR 253
Query: 128 EVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 167
+V + A + A G ETSAK+++N++E F ++R I
Sbjct: 254 KVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 293
>gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens]
Length = 327
Score = 134 bits (336), Expect = 6e-32
Identities = 61/160 (38%), Positives = 98/160 (61%)
Query: 8 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQER 67
K+ L+GD+GVGK+ ++ RF +D+F++ TIG F +TV + K +WDTAGQER
Sbjct: 134 KLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQER 193
Query: 68 FHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIR 127
F ++ YYRG+ ++ YDIT + SF ++ W+K + E+ + + GNKCD+ R
Sbjct: 194 FKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKCDMEAKR 253
Query: 128 EVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 167
+V + A + A G ETSAK+++N++E F ++R I
Sbjct: 254 KVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 293
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.135 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,275,317
Number of Sequences: 37866
Number of extensions: 280320
Number of successful extensions: 1173
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 199
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 756
Number of HSP's gapped (non-prelim): 238
length of query: 195
length of database: 18,247,518
effective HSP length: 97
effective length of query: 98
effective length of database: 14,574,516
effective search space: 1428302568
effective search space used: 1428302568
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.