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Search of human proteins with 33519436
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|33519436 cyclin B1 interacting protein 1 isoform 2 [Homo
sapiens]
(277 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|33519440 cyclin B1 interacting protein 1 isoform 4 [Homo sapi... 560 e-160
gi|33519438 cyclin B1 interacting protein 1 isoform 3 [Homo sapi... 560 e-160
gi|33519436 cyclin B1 interacting protein 1 isoform 2 [Homo sapi... 560 e-160
gi|116812640 cyclin B1 interacting protein 1 isoform 1 [Homo sap... 560 e-160
gi|55770888 early endosome antigen 1, 162kD [Homo sapiens] 40 0.003
gi|82880656 coiled-coil domain containing 46 isoform a [Homo sap... 37 0.014
gi|82880654 coiled-coil domain containing 46 isoform b [Homo sap... 36 0.042
gi|242117953 SH3 domain-containing protein C1orf113 isoform 1 [H... 35 0.055
gi|242117948 SH3 domain-containing protein C1orf113 isoform 2 [H... 35 0.055
gi|197313732 pleckstrin homology-like domain, family B, member 2... 34 0.12
gi|197313730 pleckstrin homology-like domain, family B, member 2... 34 0.12
gi|197313728 pleckstrin homology-like domain, family B, member 2... 34 0.12
gi|21955172 pleckstrin homology-like domain, family B, member 2 ... 34 0.12
gi|112420968 coiled-coil domain containing 158 [Homo sapiens] 34 0.16
gi|23097308 spectrin repeat containing, nuclear envelope 1 isofo... 33 0.21
gi|154277116 spectrin repeat containing, nuclear envelope 1 isof... 33 0.21
gi|223278347 C-type lectin domain family 4, member M isoform 9 [... 33 0.27
gi|223278344 C-type lectin domain family 4, member M isoform 10 ... 33 0.27
gi|223278337 C-type lectin domain family 4, member M isoform 12 ... 33 0.27
gi|223278335 C-type lectin domain family 4, member M isoform 2 [... 33 0.27
gi|38569491 serine/threonine-protein kinase QSK [Homo sapiens] 33 0.27
gi|223278353 C-type lectin domain family 4, member M isoform 3 [... 33 0.27
gi|223278350 C-type lectin domain family 4, member M isoform 8 [... 33 0.27
gi|42542390 C-type lectin domain family 4, member M isoform 1 [H... 33 0.27
gi|109255239 centrosomal protein 63 isoform b [Homo sapiens] 33 0.27
gi|109255226 centrosomal protein 63 isoform c [Homo sapiens] 33 0.27
gi|34577114 cytomatrix protein p110 [Homo sapiens] 33 0.27
gi|109255236 centrosomal protein 63 isoform d [Homo sapiens] 33 0.36
gi|189217904 RPGRIP1-like isoform b [Homo sapiens] 33 0.36
gi|118442834 RPGRIP1-like isoform a [Homo sapiens] 33 0.36
>gi|33519440 cyclin B1 interacting protein 1 isoform 4 [Homo
sapiens]
Length = 277
Score = 560 bits (1444), Expect = e-160
Identities = 277/277 (100%), Positives = 277/277 (100%)
Query: 1 MSLCEDMLLCNYRKCRIKLSGYAWVTACSHIFCDQHGSGEFSRSPAICPACNSTLSGKLD 60
MSLCEDMLLCNYRKCRIKLSGYAWVTACSHIFCDQHGSGEFSRSPAICPACNSTLSGKLD
Sbjct: 1 MSLCEDMLLCNYRKCRIKLSGYAWVTACSHIFCDQHGSGEFSRSPAICPACNSTLSGKLD 60
Query: 61 IVRTELSPSEEYKAMVLAGLRPEIVLDISSRALAFWTYQVHQERLYQEYNFSKAEGHLKQ 120
IVRTELSPSEEYKAMVLAGLRPEIVLDISSRALAFWTYQVHQERLYQEYNFSKAEGHLKQ
Sbjct: 61 IVRTELSPSEEYKAMVLAGLRPEIVLDISSRALAFWTYQVHQERLYQEYNFSKAEGHLKQ 120
Query: 121 MEKIYTQQIQSKDVELTSMKGEVTSMKKVLEEYKKKFSDISEKLMERNRQYQKLQGLYDS 180
MEKIYTQQIQSKDVELTSMKGEVTSMKKVLEEYKKKFSDISEKLMERNRQYQKLQGLYDS
Sbjct: 121 MEKIYTQQIQSKDVELTSMKGEVTSMKKVLEEYKKKFSDISEKLMERNRQYQKLQGLYDS 180
Query: 181 LRLRNITIANHEGTLEPSMIAQSGVLGFPLGNNSKFPLDNTPVRNRGDGDGDFQFRPFFA 240
LRLRNITIANHEGTLEPSMIAQSGVLGFPLGNNSKFPLDNTPVRNRGDGDGDFQFRPFFA
Sbjct: 181 LRLRNITIANHEGTLEPSMIAQSGVLGFPLGNNSKFPLDNTPVRNRGDGDGDFQFRPFFA 240
Query: 241 GSPTAPEPSNSFFSFVSPSRELEQQQVSSRAFKVKRI 277
GSPTAPEPSNSFFSFVSPSRELEQQQVSSRAFKVKRI
Sbjct: 241 GSPTAPEPSNSFFSFVSPSRELEQQQVSSRAFKVKRI 277
>gi|33519438 cyclin B1 interacting protein 1 isoform 3 [Homo
sapiens]
Length = 277
Score = 560 bits (1444), Expect = e-160
Identities = 277/277 (100%), Positives = 277/277 (100%)
Query: 1 MSLCEDMLLCNYRKCRIKLSGYAWVTACSHIFCDQHGSGEFSRSPAICPACNSTLSGKLD 60
MSLCEDMLLCNYRKCRIKLSGYAWVTACSHIFCDQHGSGEFSRSPAICPACNSTLSGKLD
Sbjct: 1 MSLCEDMLLCNYRKCRIKLSGYAWVTACSHIFCDQHGSGEFSRSPAICPACNSTLSGKLD 60
Query: 61 IVRTELSPSEEYKAMVLAGLRPEIVLDISSRALAFWTYQVHQERLYQEYNFSKAEGHLKQ 120
IVRTELSPSEEYKAMVLAGLRPEIVLDISSRALAFWTYQVHQERLYQEYNFSKAEGHLKQ
Sbjct: 61 IVRTELSPSEEYKAMVLAGLRPEIVLDISSRALAFWTYQVHQERLYQEYNFSKAEGHLKQ 120
Query: 121 MEKIYTQQIQSKDVELTSMKGEVTSMKKVLEEYKKKFSDISEKLMERNRQYQKLQGLYDS 180
MEKIYTQQIQSKDVELTSMKGEVTSMKKVLEEYKKKFSDISEKLMERNRQYQKLQGLYDS
Sbjct: 121 MEKIYTQQIQSKDVELTSMKGEVTSMKKVLEEYKKKFSDISEKLMERNRQYQKLQGLYDS 180
Query: 181 LRLRNITIANHEGTLEPSMIAQSGVLGFPLGNNSKFPLDNTPVRNRGDGDGDFQFRPFFA 240
LRLRNITIANHEGTLEPSMIAQSGVLGFPLGNNSKFPLDNTPVRNRGDGDGDFQFRPFFA
Sbjct: 181 LRLRNITIANHEGTLEPSMIAQSGVLGFPLGNNSKFPLDNTPVRNRGDGDGDFQFRPFFA 240
Query: 241 GSPTAPEPSNSFFSFVSPSRELEQQQVSSRAFKVKRI 277
GSPTAPEPSNSFFSFVSPSRELEQQQVSSRAFKVKRI
Sbjct: 241 GSPTAPEPSNSFFSFVSPSRELEQQQVSSRAFKVKRI 277
>gi|33519436 cyclin B1 interacting protein 1 isoform 2 [Homo
sapiens]
Length = 277
Score = 560 bits (1444), Expect = e-160
Identities = 277/277 (100%), Positives = 277/277 (100%)
Query: 1 MSLCEDMLLCNYRKCRIKLSGYAWVTACSHIFCDQHGSGEFSRSPAICPACNSTLSGKLD 60
MSLCEDMLLCNYRKCRIKLSGYAWVTACSHIFCDQHGSGEFSRSPAICPACNSTLSGKLD
Sbjct: 1 MSLCEDMLLCNYRKCRIKLSGYAWVTACSHIFCDQHGSGEFSRSPAICPACNSTLSGKLD 60
Query: 61 IVRTELSPSEEYKAMVLAGLRPEIVLDISSRALAFWTYQVHQERLYQEYNFSKAEGHLKQ 120
IVRTELSPSEEYKAMVLAGLRPEIVLDISSRALAFWTYQVHQERLYQEYNFSKAEGHLKQ
Sbjct: 61 IVRTELSPSEEYKAMVLAGLRPEIVLDISSRALAFWTYQVHQERLYQEYNFSKAEGHLKQ 120
Query: 121 MEKIYTQQIQSKDVELTSMKGEVTSMKKVLEEYKKKFSDISEKLMERNRQYQKLQGLYDS 180
MEKIYTQQIQSKDVELTSMKGEVTSMKKVLEEYKKKFSDISEKLMERNRQYQKLQGLYDS
Sbjct: 121 MEKIYTQQIQSKDVELTSMKGEVTSMKKVLEEYKKKFSDISEKLMERNRQYQKLQGLYDS 180
Query: 181 LRLRNITIANHEGTLEPSMIAQSGVLGFPLGNNSKFPLDNTPVRNRGDGDGDFQFRPFFA 240
LRLRNITIANHEGTLEPSMIAQSGVLGFPLGNNSKFPLDNTPVRNRGDGDGDFQFRPFFA
Sbjct: 181 LRLRNITIANHEGTLEPSMIAQSGVLGFPLGNNSKFPLDNTPVRNRGDGDGDFQFRPFFA 240
Query: 241 GSPTAPEPSNSFFSFVSPSRELEQQQVSSRAFKVKRI 277
GSPTAPEPSNSFFSFVSPSRELEQQQVSSRAFKVKRI
Sbjct: 241 GSPTAPEPSNSFFSFVSPSRELEQQQVSSRAFKVKRI 277
>gi|116812640 cyclin B1 interacting protein 1 isoform 1 [Homo
sapiens]
Length = 277
Score = 560 bits (1444), Expect = e-160
Identities = 277/277 (100%), Positives = 277/277 (100%)
Query: 1 MSLCEDMLLCNYRKCRIKLSGYAWVTACSHIFCDQHGSGEFSRSPAICPACNSTLSGKLD 60
MSLCEDMLLCNYRKCRIKLSGYAWVTACSHIFCDQHGSGEFSRSPAICPACNSTLSGKLD
Sbjct: 1 MSLCEDMLLCNYRKCRIKLSGYAWVTACSHIFCDQHGSGEFSRSPAICPACNSTLSGKLD 60
Query: 61 IVRTELSPSEEYKAMVLAGLRPEIVLDISSRALAFWTYQVHQERLYQEYNFSKAEGHLKQ 120
IVRTELSPSEEYKAMVLAGLRPEIVLDISSRALAFWTYQVHQERLYQEYNFSKAEGHLKQ
Sbjct: 61 IVRTELSPSEEYKAMVLAGLRPEIVLDISSRALAFWTYQVHQERLYQEYNFSKAEGHLKQ 120
Query: 121 MEKIYTQQIQSKDVELTSMKGEVTSMKKVLEEYKKKFSDISEKLMERNRQYQKLQGLYDS 180
MEKIYTQQIQSKDVELTSMKGEVTSMKKVLEEYKKKFSDISEKLMERNRQYQKLQGLYDS
Sbjct: 121 MEKIYTQQIQSKDVELTSMKGEVTSMKKVLEEYKKKFSDISEKLMERNRQYQKLQGLYDS 180
Query: 181 LRLRNITIANHEGTLEPSMIAQSGVLGFPLGNNSKFPLDNTPVRNRGDGDGDFQFRPFFA 240
LRLRNITIANHEGTLEPSMIAQSGVLGFPLGNNSKFPLDNTPVRNRGDGDGDFQFRPFFA
Sbjct: 181 LRLRNITIANHEGTLEPSMIAQSGVLGFPLGNNSKFPLDNTPVRNRGDGDGDFQFRPFFA 240
Query: 241 GSPTAPEPSNSFFSFVSPSRELEQQQVSSRAFKVKRI 277
GSPTAPEPSNSFFSFVSPSRELEQQQVSSRAFKVKRI
Sbjct: 241 GSPTAPEPSNSFFSFVSPSRELEQQQVSSRAFKVKRI 277
>gi|55770888 early endosome antigen 1, 162kD [Homo sapiens]
Length = 1411
Score = 39.7 bits (91), Expect = 0.003
Identities = 17/82 (20%), Positives = 47/82 (57%)
Query: 99 QVHQERLYQEYNFSKAEGHLKQMEKIYTQQIQSKDVELTSMKGEVTSMKKVLEEYKKKFS 158
Q+H + L E +A G LK+ ++ ++++ K+ ++ ++ +++ +++ L+E +
Sbjct: 418 QLHSKLLETERQLGEAHGRLKEQRQLSSEKLMDKEQQVADLQLKLSRLEEQLKEKVTNST 477
Query: 159 DISEKLMERNRQYQKLQGLYDS 180
++ +L + +Q+Q+ Q L S
Sbjct: 478 ELQHQLDKTKQQHQEQQALQQS 499
Score = 30.8 bits (68), Expect = 1.4
Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 119 KQMEKIYTQQIQSKDVELTSMKGEVTSMKKVLEEYKKKFSDISEKLMERNRQYQKLQGLY 178
+++ KI T Q+ +L + + ++ L+EYK+K+ + +K E Q +KL+
Sbjct: 681 QELNKI-TTQLDQVTAKLQDKQEHCSQLESHLKEYKEKYLSLEQKTEELEGQIKKLEA-- 737
Query: 179 DSLRLR 184
DSL ++
Sbjct: 738 DSLEVK 743
>gi|82880656 coiled-coil domain containing 46 isoform a [Homo
sapiens]
Length = 955
Score = 37.4 bits (85), Expect = 0.014
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 13/100 (13%)
Query: 108 EYNFSKAEGHLKQMEKIYTQQIQSKDVELTSMKGEVTSMK-----------KVLEEYKKK 156
E KA LKQ+EK YTQ++ + ++ ++S+K + L++ ++K
Sbjct: 793 EMTLEKANSKLKQIEKEYTQKLAKSSQIIAELQTTISSLKEENSQQQLAAERRLQDVRQK 852
Query: 157 FSDISEKLMERNRQYQKLQGLYDSLRLRNITIANHEGTLE 196
F D ++L+ N Q K+ L D L R+ + E L+
Sbjct: 853 FEDEKKQLIRDNDQAIKV--LQDELENRSNQVRCAEKKLQ 890
>gi|82880654 coiled-coil domain containing 46 isoform b [Homo
sapiens]
Length = 211
Score = 35.8 bits (81), Expect = 0.042
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 13/95 (13%)
Query: 113 KAEGHLKQMEKIYTQQIQSKDVELTSMKGEVTSMK-----------KVLEEYKKKFSDIS 161
KA LKQ+EK YTQ++ + ++ ++S+K + L++ ++KF D
Sbjct: 54 KANSKLKQIEKEYTQKLAKSSQIIAELQTTISSLKEENSQQQLAAERRLQDVRQKFEDEK 113
Query: 162 EKLMERNRQYQKLQGLYDSLRLRNITIANHEGTLE 196
++L+ N Q K+ L D L R+ + E L+
Sbjct: 114 KQLIRDNDQAIKV--LQDELENRSNQVRCAEKKLQ 146
>gi|242117953 SH3 domain-containing protein C1orf113 isoform 1 [Homo
sapiens]
Length = 756
Score = 35.4 bits (80), Expect = 0.055
Identities = 18/55 (32%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Query: 125 YTQQIQSKDVELTSMKGEVTSMKKVLE----EYKKKFSDISEKLMERNRQYQKLQ 175
YT+ +++ V++TS++GEV S+++ LE + ++K +DI E+L Q ++L+
Sbjct: 680 YTEN-KNEGVDVTSLRGEVESLRRALELMEVQLERKLTDIWEELKSEKEQRRRLE 733
>gi|242117948 SH3 domain-containing protein C1orf113 isoform 2 [Homo
sapiens]
Length = 645
Score = 35.4 bits (80), Expect = 0.055
Identities = 18/55 (32%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Query: 125 YTQQIQSKDVELTSMKGEVTSMKKVLE----EYKKKFSDISEKLMERNRQYQKLQ 175
YT+ +++ V++TS++GEV S+++ LE + ++K +DI E+L Q ++L+
Sbjct: 569 YTEN-KNEGVDVTSLRGEVESLRRALELMEVQLERKLTDIWEELKSEKEQRRRLE 622
>gi|197313732 pleckstrin homology-like domain, family B, member 2
isoform a [Homo sapiens]
Length = 1253
Score = 34.3 bits (77), Expect = 0.12
Identities = 18/57 (31%), Positives = 32/57 (56%)
Query: 118 LKQMEKIYTQQIQSKDVELTSMKGEVTSMKKVLEEYKKKFSDISEKLMERNRQYQKL 174
+++ME++ Q K L S + E+ + K+ LEE K++ + ++L E Q QKL
Sbjct: 1035 IEEMERLLKQAHAEKTRLLESREREMEAKKRALEEEKRRREILEKRLQEETSQRQKL 1091
>gi|197313730 pleckstrin homology-like domain, family B, member 2
isoform a [Homo sapiens]
Length = 1253
Score = 34.3 bits (77), Expect = 0.12
Identities = 18/57 (31%), Positives = 32/57 (56%)
Query: 118 LKQMEKIYTQQIQSKDVELTSMKGEVTSMKKVLEEYKKKFSDISEKLMERNRQYQKL 174
+++ME++ Q K L S + E+ + K+ LEE K++ + ++L E Q QKL
Sbjct: 1035 IEEMERLLKQAHAEKTRLLESREREMEAKKRALEEEKRRREILEKRLQEETSQRQKL 1091
>gi|197313728 pleckstrin homology-like domain, family B, member 2
isoform b [Homo sapiens]
Length = 1237
Score = 34.3 bits (77), Expect = 0.12
Identities = 18/57 (31%), Positives = 32/57 (56%)
Query: 118 LKQMEKIYTQQIQSKDVELTSMKGEVTSMKKVLEEYKKKFSDISEKLMERNRQYQKL 174
+++ME++ Q K L S + E+ + K+ LEE K++ + ++L E Q QKL
Sbjct: 1019 IEEMERLLKQAHAEKTRLLESREREMEAKKRALEEEKRRREILEKRLQEETSQRQKL 1075
>gi|21955172 pleckstrin homology-like domain, family B, member 2
isoform c [Homo sapiens]
Length = 1210
Score = 34.3 bits (77), Expect = 0.12
Identities = 18/57 (31%), Positives = 32/57 (56%)
Query: 118 LKQMEKIYTQQIQSKDVELTSMKGEVTSMKKVLEEYKKKFSDISEKLMERNRQYQKL 174
+++ME++ Q K L S + E+ + K+ LEE K++ + ++L E Q QKL
Sbjct: 992 IEEMERLLKQAHAEKTRLLESREREMEAKKRALEEEKRRREILEKRLQEETSQRQKL 1048
>gi|112420968 coiled-coil domain containing 158 [Homo sapiens]
Length = 1113
Score = 33.9 bits (76), Expect = 0.16
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 108 EYNFSKAEGHLKQMEKI--YTQQIQSKDVELTSMKGEVTSMKKVLEEYKKKFSDISEKLM 165
E + +G + +EK+ T Q++S L + E+T+ K LE ++ SD++ L
Sbjct: 447 ERQMAAIQGKNESLEKVSSLTAQLESTKEMLRKVVEELTAKKMTLESSERTISDLTTSLQ 506
Query: 166 ERNRQYQKLQGLYDSLRLR 184
E+ R + LR R
Sbjct: 507 EKERAIEATNAEITKLRSR 525
>gi|23097308 spectrin repeat containing, nuclear envelope 1 isoform 2
[Homo sapiens]
Length = 8749
Score = 33.5 bits (75), Expect = 0.21
Identities = 31/138 (22%), Positives = 61/138 (44%), Gaps = 14/138 (10%)
Query: 51 CNSTLSGKLDIVRTELSPSEEYKAMVLAGLRPEIVLDISSRALA--FWTYQVHQERLYQE 108
C S + +D +TE+S S ++ V A L + LD++ + + Q+HQE +
Sbjct: 4808 CESRMVQSIDF-QTEMSRSLDWLRRVKAELSGPVYLDLNLQDIQEEIRKIQIHQEEVQSS 4866
Query: 109 YNFSKAEGHLKQMEKIYTQQIQSKDV-----ELTSMKGEVTSMKKVLEEYKKKFSDISEK 163
A H ++ + +++ S D+ EL+ + G++ E + + + ++E
Sbjct: 4867 LRIMNALSHKEKEKFTKAKELISADLEHSLAELSELDGDIQ------EALRTRQATLTEI 4920
Query: 164 LMERNRQYQKLQGLYDSL 181
+ R YQ Q D L
Sbjct: 4921 YSQCQRYYQVFQAANDWL 4938
>gi|154277116 spectrin repeat containing, nuclear envelope 1 isoform 1
[Homo sapiens]
Length = 8797
Score = 33.5 bits (75), Expect = 0.21
Identities = 31/138 (22%), Positives = 61/138 (44%), Gaps = 14/138 (10%)
Query: 51 CNSTLSGKLDIVRTELSPSEEYKAMVLAGLRPEIVLDISSRALA--FWTYQVHQERLYQE 108
C S + +D +TE+S S ++ V A L + LD++ + + Q+HQE +
Sbjct: 4879 CESRMVQSIDF-QTEMSRSLDWLRRVKAELSGPVYLDLNLQDIQEEIRKIQIHQEEVQSS 4937
Query: 109 YNFSKAEGHLKQMEKIYTQQIQSKDV-----ELTSMKGEVTSMKKVLEEYKKKFSDISEK 163
A H ++ + +++ S D+ EL+ + G++ E + + + ++E
Sbjct: 4938 LRIMNALSHKEKEKFTKAKELISADLEHSLAELSELDGDIQ------EALRTRQATLTEI 4991
Query: 164 LMERNRQYQKLQGLYDSL 181
+ R YQ Q D L
Sbjct: 4992 YSQCQRYYQVFQAANDWL 5009
>gi|223278347 C-type lectin domain family 4, member M isoform 9
[Homo sapiens]
Length = 353
Score = 33.1 bits (74), Expect = 0.27
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 75 MVLAGLRPEIVLDISSRALAFWTYQVHQERLYQEYNFSKAE-GHLKQMEKIYTQQIQSKD 133
M+LAG+ I++ +S + Q Q+ +YQ KA G L + K+ Q+I +
Sbjct: 59 MLLAGVLVAILVQVSKVPSSLSQEQSEQDAIYQNLTQLKAAVGELSEKSKL--QEIYQEL 116
Query: 134 VELTSMKGEVTSMKKVLEEYKK--KFSDISEKLMERNRQYQKLQGLYDSL 181
+L + GE+ K+ E Y++ + +L E++ KLQ +Y L
Sbjct: 117 TQLKAAVGELPEKSKLQEIYQELTRLKAAVGELPEKS----KLQEIYQEL 162
>gi|223278344 C-type lectin domain family 4, member M isoform 10
[Homo sapiens]
Length = 232
Score = 33.1 bits (74), Expect = 0.27
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 75 MVLAGLRPEIVLDISSRALAFWTYQVHQERLYQEYNFSKAE-GHLKQMEKIYTQQIQSKD 133
M+LAG+ I++ +S + Q Q+ +YQ KA G L + K+ Q+I +
Sbjct: 59 MLLAGVLVAILVQVSKVPSSLSQEQSEQDAIYQNLTQLKAAVGELSEKSKL--QEIYQEL 116
Query: 134 VELTSMKGEVTSMKKVLEEYKK--KFSDISEKLMERNRQYQKLQGLYDSL 181
+L + GE+ K+ E Y++ + +L E++ KLQ +Y L
Sbjct: 117 TQLKAAVGELPEKSKLQEIYQELTRLKAAVGELPEKS----KLQEIYQEL 162
>gi|223278337 C-type lectin domain family 4, member M isoform 12
[Homo sapiens]
Length = 375
Score = 33.1 bits (74), Expect = 0.27
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 75 MVLAGLRPEIVLDISSRALAFWTYQVHQERLYQEYNFSKAE-GHLKQMEKIYTQQIQSKD 133
M+LAG+ I++ +S + Q Q+ +YQ KA G L + K+ Q+I +
Sbjct: 58 MLLAGVLVAILVQVSKVPSSLSQEQSEQDAIYQNLTQLKAAVGELSEKSKL--QEIYQEL 115
Query: 134 VELTSMKGEVTSMKKVLEEYKK--KFSDISEKLMERNRQYQKLQGLYDSL 181
+L + GE+ K+ E Y++ + +L E++ KLQ +Y L
Sbjct: 116 TQLKAAVGELPEKSKLQEIYQELTRLKAAVGELPEKS----KLQEIYQEL 161
>gi|223278335 C-type lectin domain family 4, member M isoform 2
[Homo sapiens]
Length = 348
Score = 33.1 bits (74), Expect = 0.27
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 75 MVLAGLRPEIVLDISSRALAFWTYQVHQERLYQEYNFSKAE-GHLKQMEKIYTQQIQSKD 133
M+LAG+ I++ +S + Q Q+ +YQ KA G L + K+ Q+I +
Sbjct: 31 MLLAGVLVAILVQVSKVPSSLSQEQSEQDAIYQNLTQLKAAVGELSEKSKL--QEIYQEL 88
Query: 134 VELTSMKGEVTSMKKVLEEYKK--KFSDISEKLMERNRQYQKLQGLYDSL 181
+L + GE+ K+ E Y++ + +L E++ KLQ +Y L
Sbjct: 89 TQLKAAVGELPEKSKLQEIYQELTRLKAAVGELPEKS----KLQEIYQEL 134
>gi|38569491 serine/threonine-protein kinase QSK [Homo sapiens]
Length = 1263
Score = 33.1 bits (74), Expect = 0.27
Identities = 20/96 (20%), Positives = 42/96 (43%)
Query: 45 PAICPACNSTLSGKLDIVRTELSPSEEYKAMVLAGLRPEIVLDISSRALAFWTYQVHQER 104
PA+ P + G+ D + S ++ + L R V S A + ++ H E+
Sbjct: 524 PAVTPVDEESSDGEPDQEAVQSSTYKDSNTLHLPTERFSPVRRFSDGAASIQAFKAHLEK 583
Query: 105 LYQEYNFSKAEGHLKQMEKIYTQQIQSKDVELTSMK 140
+ + + + +Q++K+Y QI + +E T +
Sbjct: 584 MGNNSSIKQLQQECEQLQKMYGGQIDERTLEKTQQQ 619
>gi|223278353 C-type lectin domain family 4, member M isoform 3
[Homo sapiens]
Length = 296
Score = 33.1 bits (74), Expect = 0.27
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 75 MVLAGLRPEIVLDISSRALAFWTYQVHQERLYQEYNFSKAE-GHLKQMEKIYTQQIQSKD 133
M+LAG+ I++ +S + Q Q+ +YQ KA G L + K+ Q+I +
Sbjct: 31 MLLAGVLVAILVQVSKVPSSLSQEQSEQDAIYQNLTQLKAAVGELSEKSKL--QEIYQEL 88
Query: 134 VELTSMKGEVTSMKKVLEEYKK--KFSDISEKLMERNRQYQKLQGLYDSL 181
+L + GE+ K+ E Y++ + +L E++ KLQ +Y L
Sbjct: 89 TQLKAAVGELPEKSKLQEIYQELTRLKAAVGELPEKS----KLQEIYQEL 134
>gi|223278350 C-type lectin domain family 4, member M isoform 8
[Homo sapiens]
Length = 376
Score = 33.1 bits (74), Expect = 0.27
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 75 MVLAGLRPEIVLDISSRALAFWTYQVHQERLYQEYNFSKAE-GHLKQMEKIYTQQIQSKD 133
M+LAG+ I++ +S + Q Q+ +YQ KA G L + K+ Q+I +
Sbjct: 59 MLLAGVLVAILVQVSKVPSSLSQEQSEQDAIYQNLTQLKAAVGELSEKSKL--QEIYQEL 116
Query: 134 VELTSMKGEVTSMKKVLEEYKK--KFSDISEKLMERNRQYQKLQGLYDSL 181
+L + GE+ K+ E Y++ + +L E++ KLQ +Y L
Sbjct: 117 TQLKAAVGELPEKSKLQEIYQELTRLKAAVGELPEKS----KLQEIYQEL 162
>gi|42542390 C-type lectin domain family 4, member M isoform 1 [Homo
sapiens]
Length = 399
Score = 33.1 bits (74), Expect = 0.27
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 75 MVLAGLRPEIVLDISSRALAFWTYQVHQERLYQEYNFSKAE-GHLKQMEKIYTQQIQSKD 133
M+LAG+ I++ +S + Q Q+ +YQ KA G L + K+ Q+I +
Sbjct: 59 MLLAGVLVAILVQVSKVPSSLSQEQSEQDAIYQNLTQLKAAVGELSEKSKL--QEIYQEL 116
Query: 134 VELTSMKGEVTSMKKVLEEYKK--KFSDISEKLMERNRQYQKLQGLYDSL 181
+L + GE+ K+ E Y++ + +L E++ KLQ +Y L
Sbjct: 117 TQLKAAVGELPEKSKLQEIYQELTRLKAAVGELPEKS----KLQEIYQEL 162
>gi|109255239 centrosomal protein 63 isoform b [Homo sapiens]
Length = 541
Score = 33.1 bits (74), Expect = 0.27
Identities = 24/102 (23%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
Query: 99 QVHQERLYQEYNFSKAEGHLKQMEKIYTQQIQSKDVELTSMKGEVTSMKKVLEEYKKKFS 158
++ ++ L E ++S A +K TQ++ +D+ + S KG + M+K L +K
Sbjct: 394 KLKEQILQGEQSYSSALEGMKMEISHLTQELHQRDITIASTKGSSSDMEKRLRAEMQKAE 453
Query: 159 D--ISEKLMERNRQYQKLQGLYDSLRLRNITIANHEGTLEPS 198
D + K + + KL+ + S + + + HE +L S
Sbjct: 454 DKAVEHKEILDQLESLKLENRHLSEMVMKLELGLHECSLPVS 495
>gi|109255226 centrosomal protein 63 isoform c [Homo sapiens]
Length = 495
Score = 33.1 bits (74), Expect = 0.27
Identities = 24/102 (23%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
Query: 99 QVHQERLYQEYNFSKAEGHLKQMEKIYTQQIQSKDVELTSMKGEVTSMKKVLEEYKKKFS 158
++ ++ L E ++S A +K TQ++ +D+ + S KG + M+K L +K
Sbjct: 348 KLKEQILQGEQSYSSALEGMKMEISHLTQELHQRDITIASTKGSSSDMEKRLRAEMQKAE 407
Query: 159 D--ISEKLMERNRQYQKLQGLYDSLRLRNITIANHEGTLEPS 198
D + K + + KL+ + S + + + HE +L S
Sbjct: 408 DKAVEHKEILDQLESLKLENRHLSEMVMKLELGLHECSLPVS 449
>gi|34577114 cytomatrix protein p110 [Homo sapiens]
Length = 957
Score = 33.1 bits (74), Expect = 0.27
Identities = 21/88 (23%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 126 TQQIQSKDVELTSMKGEVTSMKKVLE-------EYKKKFSDISEKLMERNRQYQKLQGLY 178
T+Q+Q E ++ GE+ MK +LE +KK ++ E+L ++++Q L+
Sbjct: 510 TKQLQDLTEEKGTLAGEIRDMKDMLEVKERKINVLQKKIENLQEQLRDKDKQLTNLKDRV 569
Query: 179 DSLRLRNITIANHEGTLEPSMIAQSGVL 206
SL+ + TLE ++ + ++
Sbjct: 570 KSLQTDSSNTDTALATLEEALSEKERII 597
Score = 28.9 bits (63), Expect = 5.2
Identities = 15/57 (26%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 119 KQMEKIYTQQIQSKDVELTSMKGEVTSMKKVLEEYKKKFSDISEKLMERNRQYQKLQ 175
K++E + +Q++ KD +LT++K V S++ + + E L E+ R ++L+
Sbjct: 546 KKIENLQ-EQLRDKDKQLTNLKDRVKSLQTDSSNTDTALATLEEALSEKERIIERLK 601
>gi|109255236 centrosomal protein 63 isoform d [Homo sapiens]
Length = 475
Score = 32.7 bits (73), Expect = 0.36
Identities = 25/112 (22%), Positives = 52/112 (46%), Gaps = 5/112 (4%)
Query: 99 QVHQERLYQEYNFSKAEGHLKQMEKIYTQQIQSKDVELTSMKGEVTSMKKVLEEYKKKFS 158
++ ++ L E ++S A +K TQ++ +D+ + S KG + M+K L +K
Sbjct: 348 KLKEQILQGEQSYSSALEGMKMEISHLTQELHQRDITIASTKGSSSDMEKRLRAEMQKAE 407
Query: 159 D--ISEKLMERNRQYQKLQGLYDSLRLRNITIANHEG---TLEPSMIAQSGV 205
D + K + + KL+ + S + + + HE T+ S++ G+
Sbjct: 408 DKAVEHKEILDQLESLKLENRHLSEMVMKLELGLHERWGFTMLSSLVLNFGI 459
>gi|189217904 RPGRIP1-like isoform b [Homo sapiens]
Length = 1235
Score = 32.7 bits (73), Expect = 0.36
Identities = 27/103 (26%), Positives = 57/103 (55%), Gaps = 8/103 (7%)
Query: 109 YNFSKAEGHLKQMEKIYTQQIQSKDVEL-TSMKGEVTSMKKVLEEYKKKFSDISEKLMER 167
Y+ + + H +Q K+ QQ++ + +L T++K ++T ++L+ K + D +EKL++
Sbjct: 366 YDSAFSAAHEEQW-KLKEQQLKVQIAQLETALKSDLTDKTEILDRLKTE-RDQNEKLVQE 423
Query: 168 NR----QYQKLQGLYDSLRLRNITIANHEGTLEPSMIAQSGVL 206
NR QY + + D L+ R I + N E + ++++ +L
Sbjct: 424 NRELQLQYLEQKQQLDELKKR-IKLYNQENDINADELSEALLL 465
>gi|118442834 RPGRIP1-like isoform a [Homo sapiens]
Length = 1315
Score = 32.7 bits (73), Expect = 0.36
Identities = 27/103 (26%), Positives = 57/103 (55%), Gaps = 8/103 (7%)
Query: 109 YNFSKAEGHLKQMEKIYTQQIQSKDVEL-TSMKGEVTSMKKVLEEYKKKFSDISEKLMER 167
Y+ + + H +Q K+ QQ++ + +L T++K ++T ++L+ K + D +EKL++
Sbjct: 366 YDSAFSAAHEEQW-KLKEQQLKVQIAQLETALKSDLTDKTEILDRLKTE-RDQNEKLVQE 423
Query: 168 NR----QYQKLQGLYDSLRLRNITIANHEGTLEPSMIAQSGVL 206
NR QY + + D L+ R I + N E + ++++ +L
Sbjct: 424 NRELQLQYLEQKQQLDELKKR-IKLYNQENDINADELSEALLL 465
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.133 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,621,029
Number of Sequences: 37866
Number of extensions: 503222
Number of successful extensions: 2792
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 107
Number of HSP's that attempted gapping in prelim test: 2493
Number of HSP's gapped (non-prelim): 431
length of query: 277
length of database: 18,247,518
effective HSP length: 101
effective length of query: 176
effective length of database: 14,423,052
effective search space: 2538457152
effective search space used: 2538457152
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.