Guide to the Human Genome
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Name: CCNB1IP1 Sequence: fasta or formatted (277aa) NCBI GI: 33519440
Description:

cyclin B1 interacting protein 1 isoform 4

Referenced in:

Cyclins and Related Functions
Small RNAs in RNA Processing

Other entries for this name:
alt mRNA [277aa] cyclin B1 interacting protein 1 isoform 1
alt mRNA [277aa] cyclin B1 interacting protein 1 isoform 2
alt mRNA [277aa] cyclin B1 interacting protein 1 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         14           1
 C cysteine            2.5          7           1
 D aspartate           4.0         11           1
 E glutamate           7.6         21           2
 F phenylalanine       5.4         15           2
 G glycine             5.8         16           1
 H histidine           1.8          5           1
 I isoleucine          4.7         13           1
 K lysine              6.9         19           3
 L leucine             9.0         25           2
 M methionine          2.9          8           1
 N asparagine          4.0         11           2
 P proline             4.7         13           1
 Q glutamine           5.8         16           3
 R arginine            6.1         17           1
 S serine             10.8         30           2
 T threonine           4.0         11           1
 V valine              4.7         13           1
 W tryptophan          0.7          2           1
 Y tyrosine            3.6         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cyclin B1 interacting protein 1 isoform 4 
CCNB1IP1              1.000   cyclin B1 interacting protein 1 isoform 3 
CCNB1IP1              1.000   cyclin B1 interacting protein 1 isoform 2 
CCNB1IP1              1.000   cyclin B1 interacting protein 1 isoform 1 
EEA1                  0.028   early endosome antigen 1, 162kD 
CCDC46                0.022   coiled-coil domain containing 46 isoform a 
CCDC46                0.021   coiled-coil domain containing 46 isoform b 
C1orf113              0.019   SH3 domain-containing protein C1orf113 isoform 1 [H...
C1orf113              0.019   SH3 domain-containing protein C1orf113 isoform 2 [H...
PHLDB2                0.017   pleckstrin homology-like domain, family B, member 2...
PHLDB2                0.017   pleckstrin homology-like domain, family B, member 2...
PHLDB2                0.017   pleckstrin homology-like domain, family B, member 2...
PHLDB2                0.017   pleckstrin homology-like domain, family B, member 2 ...
CCDC158               0.017   coiled-coil domain containing 158 
SYNE1                 0.015   spectrin repeat containing, nuclear envelope 1 isofo...
SYNE1                 0.015   spectrin repeat containing, nuclear envelope 1 isof...
CLEC4M                0.015   C-type lectin domain family 4, member M isoform 9 [...
CLEC4M                0.015   C-type lectin domain family 4, member M isoform 10 ...
CLEC4M                0.015   C-type lectin domain family 4, member M isoform 12 ...
CLEC4M                0.015   C-type lectin domain family 4, member M isoform 2 [...
QSK                   0.015   serine/threonine-protein kinase QSK 
CLEC4M                0.015   C-type lectin domain family 4, member M isoform 3 [...
CLEC4M                0.015   C-type lectin domain family 4, member M isoform 8 [...
CLEC4M                0.015   C-type lectin domain family 4, member M isoform 1 [H...
CEP63                 0.015   centrosomal protein 63 isoform b 
CEP63                 0.015   centrosomal protein 63 isoform c 
ERC2                  0.015   cytomatrix protein p110 
CEP63                 0.015   centrosomal protein 63 isoform d 
RPGRIP1L              0.015   RPGRIP1-like isoform b 
RPGRIP1L              0.015   RPGRIP1-like isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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