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Search of human proteins with 33468965
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|33468965 hypothetical protein LOC57456 [Homo sapiens]
(154 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|33468965 hypothetical protein LOC57456 [Homo sapiens] 309 7e-85
gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1... 38 0.004
gi|29244924 chromodomain helicase DNA binding protein 6 [Homo sa... 37 0.005
gi|150170670 piccolo isoform 2 [Homo sapiens] 35 0.019
gi|150378539 piccolo isoform 1 [Homo sapiens] 35 0.019
gi|91206456 hypothetical protein LOC257415 isoform 1 [Homo sapiens] 35 0.025
gi|89276756 serine/threonine-protein kinase PRP4K [Homo sapiens] 35 0.033
gi|153945728 microtubule-associated protein 1B [Homo sapiens] 34 0.057
gi|45238858 WD repeat domain 44 protein [Homo sapiens] 33 0.074
gi|30061491 erythrocyte membrane protein band 4.1-like 1 isoform... 33 0.074
gi|30061489 erythrocyte membrane protein band 4.1-like 1 isoform... 33 0.074
gi|29826335 eukaryotic translation initiation factor 2 beta [Hom... 33 0.074
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 33 0.074
gi|20270337 Leo1, Paf1/RNA polymerase II complex component, homo... 33 0.097
gi|87578396 microtubule-associated protein 2 isoform 1 [Homo sap... 33 0.13
gi|61966711 heterogeneous nuclear ribonucleoprotein C-like 1 [Ho... 33 0.13
gi|66933005 calnexin precursor [Homo sapiens] 32 0.16
gi|10716563 calnexin precursor [Homo sapiens] 32 0.16
gi|168229156 NFKB activating protein [Homo sapiens] 32 0.22
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 32 0.22
gi|5803145 ralA binding protein 1 [Homo sapiens] 31 0.37
gi|91206454 hypothetical protein LOC257415 isoform 2 [Homo sapiens] 31 0.37
gi|64276486 serologically defined colon cancer antigen 10 [Homo ... 31 0.48
gi|27734775 hypothetical protein LOC286499 [Homo sapiens] 31 0.48
gi|154146191 heat shock 90kDa protein 1, alpha isoform 2 [Homo s... 30 0.63
gi|153792590 heat shock 90kDa protein 1, alpha isoform 1 [Homo s... 30 0.63
gi|153791492 eukaryotic translation initiation factor 3, subunit... 30 0.82
gi|5174573 myeloid/lymphoid or mixed-lineage leukemia trithorax ... 30 0.82
gi|18375611 dachshund homolog 1 isoform a [Homo sapiens] 30 1.1
gi|4557509 cylicin 2 [Homo sapiens] 30 1.1
>gi|33468965 hypothetical protein LOC57456 [Homo sapiens]
Length = 154
Score = 309 bits (791), Expect = 7e-85
Identities = 154/154 (100%), Positives = 154/154 (100%)
Query: 1 MSKRNQVSYVRPAEPAFLARFKERVGYREGPTVETKRIQPQPPDEDGDHSDKEDEQPQVV 60
MSKRNQVSYVRPAEPAFLARFKERVGYREGPTVETKRIQPQPPDEDGDHSDKEDEQPQVV
Sbjct: 1 MSKRNQVSYVRPAEPAFLARFKERVGYREGPTVETKRIQPQPPDEDGDHSDKEDEQPQVV 60
Query: 61 VLKKGDLSVEEVMKIKAEIKAAKADEEPTPADGRIIYRKPVKHPSDEKYSGLTASSKKKK 120
VLKKGDLSVEEVMKIKAEIKAAKADEEPTPADGRIIYRKPVKHPSDEKYSGLTASSKKKK
Sbjct: 61 VLKKGDLSVEEVMKIKAEIKAAKADEEPTPADGRIIYRKPVKHPSDEKYSGLTASSKKKK 120
Query: 121 PNEDEVNQDSVKKNSQKQIKNSSLLSFDNEDENE 154
PNEDEVNQDSVKKNSQKQIKNSSLLSFDNEDENE
Sbjct: 121 PNEDEVNQDSVKKNSQKQIKNSSLLSFDNEDENE 154
>gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1
[Homo sapiens]
Length = 651
Score = 37.7 bits (86), Expect = 0.004
Identities = 30/120 (25%), Positives = 52/120 (43%), Gaps = 10/120 (8%)
Query: 34 ETKRIQPQPPDEDGDHSDKEDEQPQVVVLKKGDLSVEEVMKI--------KAEIKAAKAD 85
+TK+ E GD D ++ + K D ++ KI + E K ++ D
Sbjct: 362 DTKKYPESTDTESGDAKDARNDSRNLKKASKNDDKKKDAKKITFSTDSESELESKESQKD 421
Query: 86 EEPTPADGRIIYRKPVKH--PSDEKYSGLTASSKKKKPNEDEVNQDSVKKNSQKQIKNSS 143
E+ D + +K VK+ S + S SKK K +E + +DS K + +K K ++
Sbjct: 422 EKKDKKDSKTDNKKSVKNDEESTDADSEPKGDSKKGKKDEKKGKKDSKKDDKKKDAKKNA 481
Score = 27.3 bits (59), Expect = 5.3
Identities = 15/57 (26%), Positives = 28/57 (49%)
Query: 98 RKPVKHPSDEKYSGLTASSKKKKPNEDEVNQDSVKKNSQKQIKNSSLLSFDNEDENE 154
+K K SD + + K K + V +D KK+ +K +++ S D++DE +
Sbjct: 289 KKNAKKSSDAESEDSKDAKKDSKKVKKNVKKDDKKKDVKKDTESTDAESGDSKDERK 345
>gi|29244924 chromodomain helicase DNA binding protein 6 [Homo
sapiens]
Length = 2715
Score = 37.4 bits (85), Expect = 0.005
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 9/109 (8%)
Query: 30 GPTVETKRIQPQPPDEDGDHSDKEDEQPQVVVLKKGDLSVEEVMKIKAEIKAAKADEEPT 89
G V+ KR + +P D++G +D +P+ K+ +E K K E K AK +EP
Sbjct: 89 GTGVKKKRKKKEPGDQEGAAKGSKDREPKPK-RKREPKEPKEPRKAK-EPKKAKEHKEPK 146
Query: 90 PADGRIIYRKPVKHPSDEKYSGLTASSKKKKPNEDEVNQDSVKKNSQKQ 138
DG RKP + SG T +K+K+ D + +K S++Q
Sbjct: 147 QKDGAKKARKP------REASG-TKEAKEKRSCTDSAARTKSRKASKEQ 188
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 35.4 bits (80), Expect = 0.019
Identities = 34/146 (23%), Positives = 61/146 (41%), Gaps = 5/146 (3%)
Query: 3 KRNQVSYVRPAEPAFLARFKERVGYREGPTVETKRIQPQPPDEDGDHSDKEDEQPQVVVL 62
K+ + AE L + KE + + P + T Q +E DK + L
Sbjct: 1158 KKQEQEVKTEAEKVILEKVKETLSMEKIPPMVTT---DQKQEESKLEKDKASALQEKKPL 1214
Query: 63 KKGDLSVEEVMKIKAEIKAAKADEE-PTPADGRIIYRKPVKHPSDEKYSGLTASSK-KKK 120
+ + E KI++E K +E+ PTP D +++ P ++K+ L + + ++
Sbjct: 1215 PEEKKLIPEEEKIRSEEKKPLLEEKKPTPEDKKLLPEAKTSAPEEQKHDLLKSQVQIAEE 1274
Query: 121 PNEDEVNQDSVKKNSQKQIKNSSLLS 146
E V +V++ Q Q K L S
Sbjct: 1275 KLEGRVAPKTVQEGKQPQTKMEGLPS 1300
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 35.4 bits (80), Expect = 0.019
Identities = 34/146 (23%), Positives = 61/146 (41%), Gaps = 5/146 (3%)
Query: 3 KRNQVSYVRPAEPAFLARFKERVGYREGPTVETKRIQPQPPDEDGDHSDKEDEQPQVVVL 62
K+ + AE L + KE + + P + T Q +E DK + L
Sbjct: 1158 KKQEQEVKTEAEKVILEKVKETLSMEKIPPMVTT---DQKQEESKLEKDKASALQEKKPL 1214
Query: 63 KKGDLSVEEVMKIKAEIKAAKADEE-PTPADGRIIYRKPVKHPSDEKYSGLTASSK-KKK 120
+ + E KI++E K +E+ PTP D +++ P ++K+ L + + ++
Sbjct: 1215 PEEKKLIPEEEKIRSEEKKPLLEEKKPTPEDKKLLPEAKTSAPEEQKHDLLKSQVQIAEE 1274
Query: 121 PNEDEVNQDSVKKNSQKQIKNSSLLS 146
E V +V++ Q Q K L S
Sbjct: 1275 KLEGRVAPKTVQEGKQPQTKMEGLPS 1300
>gi|91206456 hypothetical protein LOC257415 isoform 1 [Homo sapiens]
Length = 247
Score = 35.0 bits (79), Expect = 0.025
Identities = 38/155 (24%), Positives = 71/155 (45%), Gaps = 30/155 (19%)
Query: 1 MSKR-NQVSYVRPAEPAFLARFKERVGYREGPTVETKRIQPQPPDEDGDHSDKEDEQPQV 59
M KR N+V+Y+ P +AR + + GPT++ +P+P E+ + Q+
Sbjct: 1 MGKRDNRVAYMNPIA---MARSRGPI-QSSGPTIQDYLNRPRPT--------WEEVKEQL 48
Query: 60 VVLKKGDLSVEEVMKIKAEIKAAKADEEPTPADGRIIYRKPVKHPSDEKYSGLTASSKKK 119
KKG ++ E + K +E ++K ++ ++ SG +SSKK+
Sbjct: 49 EKKKKGSKALAEFEE--------KMNEN---------WKKELEKHREKLLSGSESSSKKR 91
Query: 120 KPNEDEVNQDSVKKNSQKQIKNSSLLSFDNEDENE 154
+ + E + +S +SS S D+EDE++
Sbjct: 92 QRKKKEKKKSGRYSSSSSSSSDSSSSSSDSEDEDK 126
>gi|89276756 serine/threonine-protein kinase PRP4K [Homo sapiens]
Length = 1007
Score = 34.7 bits (78), Expect = 0.033
Identities = 29/138 (21%), Positives = 57/138 (41%), Gaps = 2/138 (1%)
Query: 15 PAFLARFKERVGYREGPTVETKRIQPQPPDEDGDHSDKEDEQPQVVVLKKGDLSVEEVMK 74
P R +E++G PT + +I+ + +D S +E KK V+ ++
Sbjct: 242 PTLRRRSQEKIGKARSPTDDKVKIEDKSKSKDRKKSPIINESRSRDRGKKSRSPVD--LR 299
Query: 75 IKAEIKAAKADEEPTPADGRIIYRKPVKHPSDEKYSGLTASSKKKKPNEDEVNQDSVKKN 134
K++ + +++ E + +KP+K PS + SG S ++P + K
Sbjct: 300 GKSKDRRSRSKERKSKRSETDKEKKPIKSPSKDASSGKENRSPSRRPGRSPKRRSLSPKP 359
Query: 135 SQKQIKNSSLLSFDNEDE 152
K ++ S L D +
Sbjct: 360 RDKSRRSRSPLLNDRRSK 377
>gi|153945728 microtubule-associated protein 1B [Homo sapiens]
Length = 2468
Score = 33.9 bits (76), Expect = 0.057
Identities = 33/135 (24%), Positives = 61/135 (45%), Gaps = 8/135 (5%)
Query: 6 QVSYVRPAEPAFLARFKERVGYREGPTVETKRIQPQPPDEDGDHSDKEDEQPQVVVLKKG 65
+V+ V E KE+V ++ ++T + +P + + KE+ P V +
Sbjct: 567 EVTKVNHVEKPPKVESKEKVMVKKDKPIKT---ETKPSVTEKEVPSKEEPSP--VKAEVA 621
Query: 66 DLSVEEVMKIKAEIKAAKADEEPTPADGRIIYRKPVKHPSDEKYSGLTASSKKKKPNEDE 125
+ +V A+ K K + + P D + KP K + K T K++KP ++E
Sbjct: 622 EKQATDVKPKAAKEKTVKKETKVKPEDKKEEKEKPKKEVA--KKEDKTPIKKEEKPKKEE 679
Query: 126 VNQDSVKKNSQKQIK 140
V ++ VKK +K+ K
Sbjct: 680 VKKE-VKKEIKKEEK 693
>gi|45238858 WD repeat domain 44 protein [Homo sapiens]
Length = 913
Score = 33.5 bits (75), Expect = 0.074
Identities = 23/113 (20%), Positives = 47/113 (41%), Gaps = 11/113 (9%)
Query: 10 VRPAEPAFLARFKERVGYREGPTVETKRIQPQPPDEDGDHSDKEDEQPQVVVLKK----- 64
+ P + R KE V + + +++Q QP D DG ++ Q + + K
Sbjct: 381 INPLTLHIMRRTKEYVSNDAAQSDDEEKLQSQPTDTDGGRLKQKTTQLKKFLGKSVKRAK 440
Query: 65 ------GDLSVEEVMKIKAEIKAAKADEEPTPADGRIIYRKPVKHPSDEKYSG 111
G+ ++ +V ++ E+ D+ + D + Y +PVK + + G
Sbjct: 441 HLAEEYGERAINKVKSVRDEVFHTDQDDPSSSDDEGMPYTRPVKFKAAHGFKG 493
>gi|30061491 erythrocyte membrane protein band 4.1-like 1 isoform b
[Homo sapiens]
Length = 779
Score = 33.5 bits (75), Expect = 0.074
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 3 KRNQVSYVRPAEPAFLARFKERVGYREGPTVETKRIQPQPPDEDGDHSDKEDEQPQVVVL 62
+R S P+ + ER G REG + K +P+ P+ D D +D++ V L
Sbjct: 462 RRLPSSPASPSPKGTPEKANERAGLREGSEEKVKPPRPRAPESDTGDED-QDQERDTVFL 520
Query: 63 KKGDLSVE 70
K L++E
Sbjct: 521 KDNHLAIE 528
>gi|30061489 erythrocyte membrane protein band 4.1-like 1 isoform a
[Homo sapiens]
Length = 881
Score = 33.5 bits (75), Expect = 0.074
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 3 KRNQVSYVRPAEPAFLARFKERVGYREGPTVETKRIQPQPPDEDGDHSDKEDEQPQVVVL 62
+R S P+ + ER G REG + K +P+ P+ D D +D++ V L
Sbjct: 536 RRLPSSPASPSPKGTPEKANERAGLREGSEEKVKPPRPRAPESDTGDED-QDQERDTVFL 594
Query: 63 KKGDLSVE 70
K L++E
Sbjct: 595 KDNHLAIE 602
>gi|29826335 eukaryotic translation initiation factor 2 beta [Homo
sapiens]
Length = 333
Score = 33.5 bits (75), Expect = 0.074
Identities = 29/124 (23%), Positives = 54/124 (43%), Gaps = 8/124 (6%)
Query: 34 ETKRIQPQPPDEDGDHSDKEDEQPQVVVLKKGDLSVEEVMKIKAEIKAAKADEEPTPADG 93
ETK ++P+P ++ +D+ED + + DL+ K K + K +E
Sbjct: 40 ETKEVEPEPTEDKDLEADEEDTRKKDASDDLDDLNFFNQKKKKKKTKKIFDIDEAEEGVK 99
Query: 94 RIIYRKPVKHPSD-EKYSGLTASSKKKK------PNEDEVNQDSVKKNSQKQIKNSSLLS 146
+ V+ P++ E + +KKKK P+EDE+ + + K+ +S
Sbjct: 100 DLKIESDVQEPTEPEDDLDIMLGNKKKKKKNVKFPDEDEILEKDEALEDEDNKKDDG-IS 158
Query: 147 FDNE 150
F N+
Sbjct: 159 FSNQ 162
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 33.5 bits (75), Expect = 0.074
Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Query: 20 RFKERVGYREGPTVETKRIQPQPPDEDGDHSDKEDEQPQVVVLKKGDLSVEEVMKIKAEI 79
R KER RE + K ++ + E +KE +Q + L++ +E+ K+K +
Sbjct: 527 REKEREKDRERQQEKEKELEKE--QEKQREMEKERKQEKEKELERQKEKEKELQKMKEQE 584
Query: 80 KAAKADEEPTPADGRIIYRKPVKHPSDEKYSGLTASSKKKKP 121
K + ++E + +I R+P P EK + +K+++P
Sbjct: 585 KECELEKEREKLEEKIEPREPNLEPMVEKQESENSCNKEEEP 626
>gi|20270337 Leo1, Paf1/RNA polymerase II complex component, homolog
[Homo sapiens]
Length = 666
Score = 33.1 bits (74), Expect = 0.097
Identities = 30/119 (25%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 41 QPPDEDG-DHSDKEDEQPQVVVLKKGDLSVEEVMKIKAEIKAAKADEEPTPADGRIIYRK 99
Q DED +SD +++ ++ LS +E ++ E KA DE P +D
Sbjct: 169 QGSDEDKLQNSDDDEKMQNTDDEERPQLSDDERQQLSEEEKANSDDERPVASD-----ND 223
Query: 100 PVKHPSDEKYSGLTASSKKKKPNEDEVNQDSVKKN------SQKQIKNSSLLSFDNEDE 152
K SD++ + +K + ++DE Q S +++ ++ K+ S D+EDE
Sbjct: 224 DEKQNSDDEEQPQLSDEEKMQNSDDERPQASDEEHRHSDDEEEQDHKSESARGSDSEDE 282
Score = 32.7 bits (73), Expect = 0.13
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 39 QPQPPDEDGDHSDKEDEQPQVVVLKKGDLSVEEVMKIKAEIKAAKADE 86
+PQ DE+ HSD E+EQ +G S +EV+++K + A E
Sbjct: 250 RPQASDEEHRHSDDEEEQDHKSESARGSDSEDEVLRMKRKNAIASDSE 297
>gi|87578396 microtubule-associated protein 2 isoform 1 [Homo
sapiens]
Length = 1827
Score = 32.7 bits (73), Expect = 0.13
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 9/92 (9%)
Query: 56 QPQVVVLKKGDLSVEEVMKIKAEIKAAKADEEPTPADGRI-IYRKPVKHPSDEKYSGLTA 114
Q ++ K+ +L +EE I + K + P PAD I I + +H E+
Sbjct: 431 QEPILTEKETELKLEEKTTISDKEAVPKESKPPKPADEEIGIIQTSTEHTFSEQ------ 484
Query: 115 SSKKKKPNEDEVNQDSVKKNSQKQIKNSSLLS 146
K ++P D + QDS + ++ + +S++ S
Sbjct: 485 --KDQEPTTDMLKQDSFPVSLEQAVTDSAMTS 514
>gi|61966711 heterogeneous nuclear ribonucleoprotein C-like 1 [Homo
sapiens]
Length = 293
Score = 32.7 bits (73), Expect = 0.13
Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 70 EEVMKIKAEIKAAKADEEPTPADGRIIYRKPVKHPSDEKYSGLTASSKKKKPNEDEVNQD 129
+E K + E+K AK++EE + + +K H E G S+++ P +D+VN+D
Sbjct: 206 KEQSKQEVEVKNAKSEEEQSSSS----MKKDETHVKMESEGGAEDSAEEGDPLDDDVNED 261
Query: 130 SVKKNSQKQIKNSSLLSFDNEDENE 154
+ + IK+ + + ED+ +
Sbjct: 262 Q-GDDQLELIKDDEKEAEEGEDDRD 285
>gi|66933005 calnexin precursor [Homo sapiens]
Length = 592
Score = 32.3 bits (72), Expect = 0.16
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 5/93 (5%)
Query: 13 AEPAFLARFKERVGYREGPTVETKRIQPQPPDEDGDHSDKEDEQPQVVVLKKGDLSVEEV 72
A P FL G ++ +E K+ PD + +KE+E+ + ++G+ +EE
Sbjct: 492 ALPVFLVILFCCSGKKQTSGMEYKKTDAPQPDVKEEEEEKEEEKDKGDEEEEGEEKLEEK 551
Query: 73 MKIKAE-----IKAAKADEEPTPADGRIIYRKP 100
K AE + + D +P + I+ R P
Sbjct: 552 QKSDAEEDGGTVSQEEEDRKPKAEEDEILNRSP 584
>gi|10716563 calnexin precursor [Homo sapiens]
Length = 592
Score = 32.3 bits (72), Expect = 0.16
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 5/93 (5%)
Query: 13 AEPAFLARFKERVGYREGPTVETKRIQPQPPDEDGDHSDKEDEQPQVVVLKKGDLSVEEV 72
A P FL G ++ +E K+ PD + +KE+E+ + ++G+ +EE
Sbjct: 492 ALPVFLVILFCCSGKKQTSGMEYKKTDAPQPDVKEEEEEKEEEKDKGDEEEEGEEKLEEK 551
Query: 73 MKIKAE-----IKAAKADEEPTPADGRIIYRKP 100
K AE + + D +P + I+ R P
Sbjct: 552 QKSDAEEDGGTVSQEEEDRKPKAEEDEILNRSP 584
>gi|168229156 NFKB activating protein [Homo sapiens]
Length = 415
Score = 32.0 bits (71), Expect = 0.22
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 13/132 (9%)
Query: 22 KERVGYREGPTVETKRIQPQPPDEDGD-HSDKEDEQPQVVVL---------KKGDLSVEE 71
+ER+G P E + P+ P+ D D H+ EDE+P+ KK +E
Sbjct: 134 RERIGELGAP--EVWGLSPKNPEPDSDEHTPVEDEEPKKSTTSASTSEEEKKKKSSRSKE 191
Query: 72 VMKIKAEIKAAKADEEPTPADGRIIYRKPVKHPSDEKYSGLTASSKKKKPNEDEVNQDSV 131
K + + K++K + D SDE +KKK+ + ++
Sbjct: 192 RSKKRRKKKSSKRKHKKYSEDSDSDSDSETDS-SDEDNKRRAKKAKKKEKKKKHRSKKYK 250
Query: 132 KKNSQKQIKNSS 143
KK S+K K SS
Sbjct: 251 KKRSKKSRKESS 262
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 32.0 bits (71), Expect = 0.22
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 7/129 (5%)
Query: 22 KERVGYREGPTVET-KRIQPQPPDEDGDHSDK----EDEQPQVVVLKKGDLSVEEVMKIK 76
K +V ++ P VE K + + E+ + K E E P V +K+ E+ K
Sbjct: 871 KPKVEEKKEPAVEKPKESKVEAKKEEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVAK 930
Query: 77 AEIKAAKADEEPTPADGR--IIYRKPVKHPSDEKYSGLTASSKKKKPNEDEVNQDSVKKN 134
E AKA E PA+ + +K K +K + K K ++ ++++ K
Sbjct: 931 KEPDDAKAKEPSKPAEKKEAAPEKKDTKEEKAKKPEEKPKTEAKAKEDDKTLSKEPSKPK 990
Query: 135 SQKQIKNSS 143
++K K+SS
Sbjct: 991 AEKAEKSSS 999
Score = 30.4 bits (67), Expect = 0.63
Identities = 21/103 (20%), Positives = 43/103 (41%), Gaps = 11/103 (10%)
Query: 42 PPDEDGDHSDKEDEQPQVVVLKKGDLSVEEVMKIKAEIKAAKADEEP------TPADGRI 95
PP+ ++ +V +K +E K AE K+ + + P +PA+ +
Sbjct: 561 PPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAKSPVKEEAKSPAEAKS 620
Query: 96 IYRKPVKHPSDEKYSGLTASSKKKKPNEDEVNQDSVKKNSQKQ 138
++ K P++ K + K K P ++E K+ +K+
Sbjct: 621 PVKEEAKSPAEVK-----SPEKAKSPTKEEAKSPEKAKSPEKE 658
Score = 29.6 bits (65), Expect = 1.1
Identities = 23/112 (20%), Positives = 47/112 (41%), Gaps = 10/112 (8%)
Query: 32 TVETKRIQPQPPDEDGDHSDKEDEQPQVVVLKKGDLSV-----EEVMKIKAEIKAAKADE 86
T T+ + + E + KE+E + + G+ EE + E K+ +E
Sbjct: 464 TQVTEEVTEEEEKEAKEEEGKEEEGGEEEEAEGGEEETKSPPAEEAASPEKEAKSPVKEE 523
Query: 87 EPTPADGRIIYRKPVKHPSDEKYSGLTASSKKKKPNEDEVNQDSVKKNSQKQ 138
+PA+ + ++ K P++ K + K K P ++E K+ +K+
Sbjct: 524 AKSPAEAKSPEKEEAKSPAEVK-----SPEKAKSPAKEEAKSPPEAKSPEKE 570
Score = 28.1 bits (61), Expect = 3.1
Identities = 26/121 (21%), Positives = 49/121 (40%), Gaps = 9/121 (7%)
Query: 20 RFKERVGYREGPTVETKRIQPQPPDEDGDHSDKEDEQPQVVVLKKGDLSVEEVMKIKAEI 79
+F E+ V++ P ED +KE + + V K E+ ++K +
Sbjct: 780 KFPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEV--KSPVKEEEKPQEVKVKE 837
Query: 80 KAAKADEEPTPADGRIIYRKPVKHPSDEKYSGLTASSKKKKPNEDEVNQDSVKKNSQKQI 139
KA+EE PA + +K K K + KP +E + +V+K + ++
Sbjct: 838 PPKKAEEEKAPATPKTEEKKDSKKEEAPK-------KEAPKPKVEEKKEPAVEKPKESKV 890
Query: 140 K 140
+
Sbjct: 891 E 891
>gi|5803145 ralA binding protein 1 [Homo sapiens]
Length = 655
Score = 31.2 bits (69), Expect = 0.37
Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 15/127 (11%)
Query: 27 YREGPTVETKRIQPQPPDEDGDHSDKEDEQPQVVVLKKGDLSVEEVMKIKAEIKAAKADE 86
YR G I +PPD D D++D + KK + E + + + DE
Sbjct: 42 YRTGEPSPPHDILHEPPDVVSD--DEKDHGKKKGKFKKKEKRTEGYAAFQED---SSGDE 96
Query: 87 EPTPAD-----GRIIYRKPVKHPSDEKYSGLTASSKKKKPNEDEVNQDSVKKNSQKQIKN 141
+P+ G +++KP EK + K+KP E++ ++ K+ K+ K+
Sbjct: 97 AESPSKMKRSKGIHVFKKPSFSKKKEKDFKI-----KEKPKEEKHKEEKHKEEKHKEKKS 151
Query: 142 SSLLSFD 148
L + D
Sbjct: 152 KDLTAAD 158
>gi|91206454 hypothetical protein LOC257415 isoform 2 [Homo sapiens]
Length = 237
Score = 31.2 bits (69), Expect = 0.37
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 70 EEVMKIKAEIKAAKADEEPTPADGRIIYRKPVKHPSDEKYSGLTASSKKKKPNEDEVNQD 129
E++ K K KA EE + ++K ++ ++ SG +SSKK++ + E +
Sbjct: 36 EQLEKKKKGSKALAEFEEKMNEN----WKKELEKHREKLLSGSESSSKKRQRKKKEKKKS 91
Query: 130 SVKKNSQKQIKNSSLLSFDNEDENE 154
+S +SS S D+EDE++
Sbjct: 92 GRYSSSSSSSSDSSSSSSDSEDEDK 116
>gi|64276486 serologically defined colon cancer antigen 10 [Homo
sapiens]
Length = 472
Score = 30.8 bits (68), Expect = 0.48
Identities = 19/38 (50%), Positives = 21/38 (55%), Gaps = 6/38 (15%)
Query: 117 KKKKPNEDEVNQDSVKKNSQKQIKNSSLLSFDNEDENE 154
KK+KP E+ VKK K KN SLLSF E E E
Sbjct: 183 KKEKPEEE------VKKLKPKGTKNFSLLSFGEEAEEE 214
>gi|27734775 hypothetical protein LOC286499 [Homo sapiens]
Length = 248
Score = 30.8 bits (68), Expect = 0.48
Identities = 28/118 (23%), Positives = 50/118 (42%), Gaps = 11/118 (9%)
Query: 28 REGPTVETKRIQPQPPDEDGDHSDKEDEQPQVVVLKKGDLSVEEVMKIKAEIKAAKADEE 87
++G + K+ + + H + + + V KK S +E K K +K ++
Sbjct: 126 KQGKRRKKKKNRSYKSSQSSTHESESESKESV---KKKKKSKDETEKEKDVRSLSKKRKK 182
Query: 88 PTPADGRIIYRKPV--KHPSDEKYSGLTASSKKKKPNEDEVNQDSVKKNSQKQIKNSS 143
P D KP+ + S+ Y + KK++ E E ++ VKK +KQ K S
Sbjct: 183 SYPDD------KPLSSESSSESDYEEDVQAKKKRRCEEREQAKEKVKKKKKKQHKKHS 234
Score = 28.9 bits (63), Expect = 1.8
Identities = 37/155 (23%), Positives = 70/155 (45%), Gaps = 31/155 (20%)
Query: 1 MSKR-NQVSYVRPAEPAFLARFKERVGYREGPTVETKRIQPQPPDEDGDHSDKEDEQPQV 59
M KR N+V+Y+ P +AR++ GPT++ +P+P E+ + Q+
Sbjct: 1 MGKRDNRVAYMNPIA---MARWRGPT-QSVGPTIQDYLNRPRPT--------WEEVKKQL 48
Query: 60 VVLKKGDLSVEEVMKIKAEIKAAKADEEPTPADGRIIYRKPVKHPSDEKYSGLTASSKKK 119
K G ++ E + K +E ++K ++ ++ SG +SSKK+
Sbjct: 49 ENKKTGSKALAEFEE--------KMNEN---------WKKELEKSREKLLSGNESSSKKR 91
Query: 120 KPNEDEVNQDSVKKNSQKQIKNSSLLSFDNEDENE 154
+ + + S + +S +SS S D+EDE +
Sbjct: 92 ERKKKR-KKKSCRSSSSSSSSDSSSSSSDSEDEEK 125
>gi|154146191 heat shock 90kDa protein 1, alpha isoform 2 [Homo
sapiens]
Length = 732
Score = 30.4 bits (67), Expect = 0.63
Identities = 32/131 (24%), Positives = 54/131 (41%), Gaps = 18/131 (13%)
Query: 3 KRNQVSYVRPAE-PAFLARFKERVGYREGPTVETKRIQPQPPDEDGDHSDKEDEQPQVVV 61
K +Q Y+ + + + +GY VE +R + DE + DKE+E+ +
Sbjct: 191 KEDQTEYLEERRIKEIVKKHSQFIGYPITLFVEKERDKEVSDDEAEEKEDKEEEKEK--- 247
Query: 62 LKKGDLSVEEVMKIKAEIKAAKADEEPTPADGRIIYRKPVKHPSDEKYSGLTASSKKK-- 119
E+ + K EI+ +DEE DG +K +K EKY +K K
Sbjct: 248 -------EEKESEDKPEIEDVGSDEEEEKKDGDKKKKKKIK----EKYIDQEELNKTKPI 296
Query: 120 -KPNEDEVNQD 129
N D++ +
Sbjct: 297 WTRNPDDITNE 307
>gi|153792590 heat shock 90kDa protein 1, alpha isoform 1 [Homo
sapiens]
Length = 854
Score = 30.4 bits (67), Expect = 0.63
Identities = 32/131 (24%), Positives = 54/131 (41%), Gaps = 18/131 (13%)
Query: 3 KRNQVSYVRPAE-PAFLARFKERVGYREGPTVETKRIQPQPPDEDGDHSDKEDEQPQVVV 61
K +Q Y+ + + + +GY VE +R + DE + DKE+E+ +
Sbjct: 313 KEDQTEYLEERRIKEIVKKHSQFIGYPITLFVEKERDKEVSDDEAEEKEDKEEEKEK--- 369
Query: 62 LKKGDLSVEEVMKIKAEIKAAKADEEPTPADGRIIYRKPVKHPSDEKYSGLTASSKKK-- 119
E+ + K EI+ +DEE DG +K +K EKY +K K
Sbjct: 370 -------EEKESEDKPEIEDVGSDEEEEKKDGDKKKKKKIK----EKYIDQEELNKTKPI 418
Query: 120 -KPNEDEVNQD 129
N D++ +
Sbjct: 419 WTRNPDDITNE 429
>gi|153791492 eukaryotic translation initiation factor 3, subunit
C-like [Homo sapiens]
Length = 914
Score = 30.0 bits (66), Expect = 0.82
Identities = 22/100 (22%), Positives = 42/100 (42%), Gaps = 3/100 (3%)
Query: 29 EGPTVETKRIQPQPPDEDGDHSDKEDEQPQVVVLKKGDLSVEEVMKIKAEIKAAKADEEP 88
E P+ E+++ + DED D D ED++ D EE + + + + P
Sbjct: 202 EAPSGESRKFLKKMDDEDEDSEDSEDDEDWDTGSTSSDSDSEEEEGKQTALASRFLKKAP 261
Query: 89 TPADGRIIYRKPVKHPSDEKYSGLTASSKKKKPNEDEVNQ 128
T + + K + + +K+ SK+ E+E N+
Sbjct: 262 TTDEDKKAAEKKREDKAKKKHD---RKSKRLDEEEEEDNE 298
>gi|5174573 myeloid/lymphoid or mixed-lineage leukemia trithorax
homolog 2 [Homo sapiens]
Length = 1210
Score = 30.0 bits (66), Expect = 0.82
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 83 KADEEPTPADGRIIYRKPVKHPSDEKYSGLTASSKKKKPNEDEVNQDSVKKNSQKQIKNS 142
KA+++ PA KH S+++ S ++ KK+ E E + D+ K +K+IK+
Sbjct: 785 KAEDKQPPAGK--------KHSSEKRSSDSSSKLAKKRKGEAERDCDNKKIRLEKEIKSQ 836
Query: 143 SLLSFDNEDEN 153
S S + E+
Sbjct: 837 SSSSSSSHKES 847
Score = 26.6 bits (57), Expect = 9.1
Identities = 28/108 (25%), Positives = 39/108 (36%), Gaps = 9/108 (8%)
Query: 40 PQPPDEDGDHSDKEDEQPQVVVLKKGDLSVEEVMKIKAEIKAAKADEEPTPADGRIIYRK 99
PQPP + ED+QP KK K K + E + +I K
Sbjct: 774 PQPPGKGSRQRKAEDKQPPAG--KKHSSEKRSSDSSSKLAKKRKGEAERDCDNKKIRLEK 831
Query: 100 PVKHPSDEKYSGLTASSKKK--KPNEDEVNQD-----SVKKNSQKQIK 140
+K S S SSK K +P+ ++ V +SQK K
Sbjct: 832 EIKSQSSSSSSSHKESSKTKPSRPSSQSSKKEMLPPPPVSSSSQKPAK 879
>gi|18375611 dachshund homolog 1 isoform a [Homo sapiens]
Length = 706
Score = 29.6 bits (65), Expect = 1.1
Identities = 14/63 (22%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 74 KIKAEIKAAKADEEPTPADGRIIYRKPVKHPSDEKYSGLTASSKKKKPNEDE--VNQDSV 131
+++ + + + P+PA R+P HPS + S +++S + + + D V+Q+ +
Sbjct: 426 RVETSVIKERVPDSPSPAPSLEEGRRPGSHPSSHRSSSVSSSPARTESSSDRIPVHQNGL 485
Query: 132 KKN 134
N
Sbjct: 486 SMN 488
>gi|4557509 cylicin 2 [Homo sapiens]
Length = 348
Score = 29.6 bits (65), Expect = 1.1
Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 5/92 (5%)
Query: 63 KKGDLSVEEVMKIKAEIKAAKADEEPTPADGRIIYRKPVKHPSDEKYSGLTASSKKKKPN 122
KKG S E+ +KA+ K DE+ + K K + E G KKK +
Sbjct: 225 KKGKDSAIELQAVKAD---EKKDEDGKKDANKGDESKDAKKDAKEIKKG--KKDKKKPSS 279
Query: 123 EDEVNQDSVKKNSQKQIKNSSLLSFDNEDENE 154
D ++D VKK S+K + + E E
Sbjct: 280 TDSDSKDDVKKESKKDATKDAKKVAKKDTEKE 311
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.304 0.125 0.337
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,666,237
Number of Sequences: 37866
Number of extensions: 319821
Number of successful extensions: 1249
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 113
Number of HSP's that attempted gapping in prelim test: 1160
Number of HSP's gapped (non-prelim): 199
length of query: 154
length of database: 18,247,518
effective HSP length: 93
effective length of query: 61
effective length of database: 14,725,980
effective search space: 898284780
effective search space used: 898284780
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.8 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.