Guide to the Human Genome
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Name: IQCB1 Sequence: fasta or formatted (465aa) NCBI GI: 170014680
Description:

IQ motif containing B1 isoform c

Referenced in:

Calmodulin and Calcium
Kidney
Additional Interaction Domain Families

Other entries for this name:
alt prot [598aa] IQ motif containing B1 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         33           2
 C cysteine            1.3          6           2
 D aspartate           3.7         17           2
 E glutamate           9.5         44           3
 F phenylalanine       2.8         13           2
 G glycine             4.3         20           2
 H histidine           3.2         15           1
 I isoleucine          6.2         29           2
 K lysine              7.7         36           4
 L leucine            13.8         64           2
 M methionine          2.4         11           3
 N asparagine          2.8         13           1
 P proline             3.7         17           2
 Q glutamine           8.2         38           2
 R arginine            6.5         30           2
 S serine              5.8         27           2
 T threonine           3.0         14           2
 V valine              4.7         22           2
 W tryptophan          1.3          6           2
 Y tyrosine            2.2         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   IQ motif containing B1 isoform c 
IQCB1                 0.569   IQ motif containing B1 isoform a 
GIGYF2                0.022   GRB10 interacting GYF protein 2 isoform c 
GIGYF2                0.022   GRB10 interacting GYF protein 2 isoform a 
GIGYF2                0.022   GRB10 interacting GYF protein 2 isoform b 
GIGYF2                0.022   GRB10 interacting GYF protein 2 isoform b 
TCHH                  0.020   trichohyalin 
PPL                   0.020   periplakin 
MYO9A                 0.019   myosin IXA 
LRRC45                0.019   leucine rich repeat containing 45 
CCDC19                0.019   nasopharyngeal epithelium specific protein 1 
BAZ2B                 0.018   bromodomain adjacent to zinc finger domain, 2B [Homo...
AMOTL2                0.018   angiomotin like 2 
MYO7A                 0.017   myosin VIIA isoform 2 
MYO7A                 0.017   myosin VIIA isoform 3 
MYO7A                 0.017   myosin VIIA isoform 1 
INCENP                0.017   inner centromere protein antigens 135/155kDa isofor...
INCENP                0.017   inner centromere protein antigens 135/155kDa isofor...
MYH14                 0.016   myosin, heavy chain 14 isoform 1 
MYH14                 0.016   myosin, heavy chain 14 isoform 2 
MYH14                 0.016   myosin, heavy chain 14 isoform 3 
CCDC88A               0.016   coiled-coil domain containing 88A isoform 1 
GOLGA4                0.016   golgi autoantigen, golgin subfamily a, 4 
CCDC91                0.016   GGA binding partner 
CCDC50                0.015   Ymer protein short isoform 
ASPM                  0.013   asp (abnormal spindle)-like, microcephaly associate...
CCDC88A               0.013   coiled-coil domain containing 88A isoform 2 
FOXP2                 0.013   forkhead box P2 isoform I 
MYH7B                 0.013   myosin, heavy polypeptide 7B, cardiac muscle, beta ...
ZNF853                0.013   zinc finger protein 853 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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