Guide to the Human Genome
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Name: NAIP Sequence: fasta or formatted (1241aa) NCBI GI: 119393876
Description:

NLR family, apoptosis inhibitory protein isoform 2

Referenced in:

BCL2 Pathways, Caspases, and Programmed Cell Death
Protease Inhibitors

Other entries for this name:
alt prot [1403aa] NLR family, apoptosis inhibitory protein isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         69           2
 C cysteine            2.7         34           2
 D aspartate           5.1         63           3
 E glutamate           6.8         85           2
 F phenylalanine       6.1         76           2
 G glycine             3.7         46           2
 H histidine           2.6         32           2
 I isoleucine          6.1         76           2
 K lysine              5.7         71           2
 L leucine            13.5        168           3
 M methionine          2.3         28           2
 N asparagine          4.4         54           2
 P proline             4.3         53           1
 Q glutamine           5.2         65           2
 R arginine            3.9         49           2
 S serine              9.3        116           2
 T threonine           3.9         48           2
 V valine              5.2         64           2
 W tryptophan          1.1         14           1
 Y tyrosine            2.4         30           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   NLR family, apoptosis inhibitory protein isoform 2 ... 
NAIP                  0.949   NLR family, apoptosis inhibitory protein isoform 1 ...
NLRC4                 0.075   caspase recruitment domain protein 12 
BIRC7                 0.024   livin inhibitor of apoptosis isoform beta 
BIRC7                 0.024   livin inhibitor of apoptosis isoform alpha 
XIAP                  0.021   baculoviral IAP repeat-containing protein 4 
BIRC2                 0.020   baculoviral IAP repeat-containing protein 2 
BIRC3                 0.020   baculoviral IAP repeat-containing protein 3 
BIRC3                 0.020   baculoviral IAP repeat-containing protein 3 
BIRC8                 0.015   baculoviral IAP repeat-containing 8 
NLRP2                 0.015   NLR family, pyrin domain containing 2 
NLRP1                 0.013   NLR family, pyrin domain containing 1 isoform 2 [Homo...
NLRP1                 0.013   NLR family, pyrin domain containing 1 isoform 4 [Hom...
NLRP1                 0.013   NLR family, pyrin domain containing 1 isoform 5 [Hom...
NLRP1                 0.013   NLR family, pyrin domain containing 1 isoform 3 [Hom...
NLRP1                 0.013   NLR family, pyrin domain containing 1 isoform 1 [Hom...
NLRP4                 0.012   NLR family, pyrin domain containing 4 
NLRP9                 0.012   NLR family, pyrin domain containing 9 
NLRP7                 0.011   NACHT, leucine rich repeat and PYD containing 7 iso...
NLRP7                 0.011   NACHT, leucine rich repeat and PYD containing 7 isof...
NLRP7                 0.011   NACHT, leucine rich repeat and PYD containing 7 isof...
NLRP12                0.011   NLR family, pyrin domain containing 12 isoform 2 [Ho...
BIRC5                 0.011   baculoviral IAP repeat-containing protein 5 isoform ...
LRRC31                0.010   leucine rich repeat containing 31 
BIRC6                 0.010   baculoviral IAP repeat-containing 6 
NLRP3                 0.009   NLR family, pyrin domain containing 3 isoform a [Ho...
NLRP3                 0.009   NLR family, pyrin domain containing 3 isoform c [Ho...
NLRP3                 0.009   NLR family, pyrin domain containing 3 isoform d [Ho...
NLRP3                 0.009   NLR family, pyrin domain containing 3 isoform a [Hom...
NLRP3                 0.009   NLR family, pyrin domain containing 3 isoform b [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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