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Search of human proteins with 32307156
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|32307156 chemokine-like factor isoform d [Homo sapiens]
(120 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|32307156 chemokine-like factor isoform d [Homo sapiens] 246 4e-66
gi|8393581 chemokine-like factor isoform a [Homo sapiens] 229 4e-61
gi|93141024 chemokine-like factor isoform e [Homo sapiens] 165 6e-42
gi|32307154 chemokine-like factor isoform b [Homo sapiens] 129 7e-31
gi|7705933 chemokine-like factor isoform c [Homo sapiens] 117 2e-27
gi|148743778 chemokine-like factor superfamily 1 isoform 14 [Hom... 71 2e-13
gi|148743783 chemokine-like factor superfamily 1 isoform 13 [Hom... 71 2e-13
gi|31563394 chemokine-like factor superfamily 1 isoform 2 [Homo ... 59 8e-10
gi|31563392 chemokine-like factor superfamily 1 isoform 1 [Homo ... 59 8e-10
gi|31657099 CKLF-like MARVEL transmembrane domain containing 7 i... 41 2e-04
gi|82546841 chemokine-like factor superfamily 5 isoform c [Homo ... 35 0.017
gi|21389567 chemokine-like factor superfamily 2 [Homo sapiens] 33 0.050
gi|19923929 CKLF-like MARVEL transmembrane domain containing 7 i... 32 0.14
gi|115385972 chemokine-like factor superfamily 3 [Homo sapiens] 30 0.55
gi|32130528 chemokine-like factor superfamily 3 [Homo sapiens] 30 0.55
gi|32130526 chemokine-like factor superfamily 3 [Homo sapiens] 30 0.55
gi|21389401 chemokine-like factor superfamily 3 [Homo sapiens] 30 0.55
gi|22296884 transmembrane protein 185A [Homo sapiens] 27 2.7
gi|42542383 solute carrier family 28, member 1 isoform 2 [Homo s... 27 4.6
gi|42542381 solute carrier family 28, member 1 isoform 1 [Homo s... 27 4.6
gi|19923993 chemokine-like factor superfamily 5 isoform a [Homo ... 27 4.6
gi|19923621 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and s... 26 6.1
gi|53793669 olfactory receptor, family 10, subfamily G, member 3... 26 6.1
gi|171184433 outer dense fiber of sperm tails 4 [Homo sapiens] 26 7.9
gi|27886667 potassium voltage-gated channel, subfamily H, member... 26 7.9
>gi|32307156 chemokine-like factor isoform d [Homo sapiens]
Length = 120
Score = 246 bits (627), Expect = 4e-66
Identities = 120/120 (100%), Positives = 120/120 (100%)
Query: 1 MDNVQPKIKHRPFCFSVKGHVKMLRLALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFI 60
MDNVQPKIKHRPFCFSVKGHVKMLRLALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFI
Sbjct: 1 MDNVQPKIKHRPFCFSVKGHVKMLRLALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFI 60
Query: 61 LLYVLRLDRLMKWLFWPLLVFALVTAVCCLADGALIYRKLLFNPSGPYQKKPVHEKKEVL 120
LLYVLRLDRLMKWLFWPLLVFALVTAVCCLADGALIYRKLLFNPSGPYQKKPVHEKKEVL
Sbjct: 61 LLYVLRLDRLMKWLFWPLLVFALVTAVCCLADGALIYRKLLFNPSGPYQKKPVHEKKEVL 120
>gi|8393581 chemokine-like factor isoform a [Homo sapiens]
Length = 152
Score = 229 bits (584), Expect = 4e-61
Identities = 120/152 (78%), Positives = 120/152 (78%), Gaps = 32/152 (21%)
Query: 1 MDNVQPKIKHRPFCFSVKGHVKMLRLALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFI 60
MDNVQPKIKHRPFCFSVKGHVKMLRLALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFI
Sbjct: 1 MDNVQPKIKHRPFCFSVKGHVKMLRLALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFI 60
Query: 61 LLYVLRLDRLMKWLFWPLL--------------------------------VFALVTAVC 88
LLYVLRLDRLMKWLFWPLL VFALVTAVC
Sbjct: 61 LLYVLRLDRLMKWLFWPLLDIINSLVTTVFMLIVSVLALIPETTTLTVGGGVFALVTAVC 120
Query: 89 CLADGALIYRKLLFNPSGPYQKKPVHEKKEVL 120
CLADGALIYRKLLFNPSGPYQKKPVHEKKEVL
Sbjct: 121 CLADGALIYRKLLFNPSGPYQKKPVHEKKEVL 152
>gi|93141024 chemokine-like factor isoform e [Homo sapiens]
Length = 113
Score = 165 bits (418), Expect = 6e-42
Identities = 84/92 (91%), Positives = 86/92 (93%), Gaps = 2/92 (2%)
Query: 1 MDNVQPKIKHRPFCFSVKGHVKMLRLALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFI 60
MDNVQPKIKHRPFCFSVKGHVKMLRLALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFI
Sbjct: 1 MDNVQPKIKHRPFCFSVKGHVKMLRLALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFI 60
Query: 61 LLYVLRLDRLMKWLFWPLL--VFALVTAVCCL 90
LLYVLRLDRLMKWLFWPLL + +LVT V L
Sbjct: 61 LLYVLRLDRLMKWLFWPLLDIINSLVTTVFML 92
>gi|32307154 chemokine-like factor isoform b [Homo sapiens]
Length = 99
Score = 129 bits (323), Expect = 7e-31
Identities = 73/120 (60%), Positives = 80/120 (66%), Gaps = 21/120 (17%)
Query: 1 MDNVQPKIKHRPFCFSVKGHVKMLRLALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFI 60
MDNVQPKIKHRPFCFSVKGHVKMLRL + + +T +F +
Sbjct: 1 MDNVQPKIKHRPFCFSVKGHVKMLRLDIINSLVT---------------------TVFML 39
Query: 61 LLYVLRLDRLMKWLFWPLLVFALVTAVCCLADGALIYRKLLFNPSGPYQKKPVHEKKEVL 120
++ VL L L VFALVTAVCCLADGALIYRKLLFNPSGPYQKKPVHEKKEVL
Sbjct: 40 IVSVLALIPETTTLTVGGGVFALVTAVCCLADGALIYRKLLFNPSGPYQKKPVHEKKEVL 99
>gi|7705933 chemokine-like factor isoform c [Homo sapiens]
Length = 67
Score = 117 bits (293), Expect = 2e-27
Identities = 67/120 (55%), Positives = 67/120 (55%), Gaps = 53/120 (44%)
Query: 1 MDNVQPKIKHRPFCFSVKGHVKMLRLALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFI 60
MDNVQPKIKHRPFCFSVKGHVKMLR
Sbjct: 1 MDNVQPKIKHRPFCFSVKGHVKMLR----------------------------------- 25
Query: 61 LLYVLRLDRLMKWLFWPLLVFALVTAVCCLADGALIYRKLLFNPSGPYQKKPVHEKKEVL 120
LVFALVTAVCCLADGALIYRKLLFNPSGPYQKKPVHEKKEVL
Sbjct: 26 ------------------LVFALVTAVCCLADGALIYRKLLFNPSGPYQKKPVHEKKEVL 67
>gi|148743778 chemokine-like factor superfamily 1 isoform 14 [Homo
sapiens]
Length = 231
Score = 71.2 bits (173), Expect = 2e-13
Identities = 36/77 (46%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 13 FCFSVKGHVKMLRLALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFILLYVLRLDRLMK 72
F FS G +K+LRL+L + ++ FII QA E +I IT E+ +++FFIL+YVL L L+
Sbjct: 131 FSFSPTGMLKILRLSLILGALACFIITQANESFITITSLEICIVVFFILIYVLTLHHLLT 190
Query: 73 WLFWPL--LVFALVTAV 87
+L WPL L +++TAV
Sbjct: 191 YLHWPLLDLTNSIITAV 207
>gi|148743783 chemokine-like factor superfamily 1 isoform 13 [Homo
sapiens]
Length = 286
Score = 71.2 bits (173), Expect = 2e-13
Identities = 36/77 (46%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 13 FCFSVKGHVKMLRLALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFILLYVLRLDRLMK 72
F FS G +K+LRL+L + ++ FII QA E +I IT E+ +++FFIL+YVL L L+
Sbjct: 131 FSFSPTGMLKILRLSLILGALACFIITQANESFITITSLEICIVVFFILIYVLTLHHLLT 190
Query: 73 WLFWPL--LVFALVTAV 87
+L WPL L +++TAV
Sbjct: 191 YLHWPLLDLTNSIITAV 207
>gi|31563394 chemokine-like factor superfamily 1 isoform 2 [Homo
sapiens]
Length = 114
Score = 58.9 bits (141), Expect = 8e-10
Identities = 29/64 (45%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Query: 26 LALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFILLYVLRLDRLMKWLFWPL--LVFAL 83
L+L + ++ FII QA E +I IT E+ +++FFIL+YVL L L+ +L WPL L ++
Sbjct: 27 LSLILGALACFIITQANESFITITSLEICIVVFFILIYVLTLHHLLTYLHWPLLDLTNSI 86
Query: 84 VTAV 87
+TAV
Sbjct: 87 ITAV 90
>gi|31563392 chemokine-like factor superfamily 1 isoform 1 [Homo
sapiens]
Length = 169
Score = 58.9 bits (141), Expect = 8e-10
Identities = 29/64 (45%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Query: 26 LALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFILLYVLRLDRLMKWLFWPL--LVFAL 83
L+L + ++ FII QA E +I IT E+ +++FFIL+YVL L L+ +L WPL L ++
Sbjct: 27 LSLILGALACFIITQANESFITITSLEICIVVFFILIYVLTLHHLLTYLHWPLLDLTNSI 86
Query: 84 VTAV 87
+TAV
Sbjct: 87 ITAV 90
>gi|31657099 CKLF-like MARVEL transmembrane domain containing 7
isoform b [Homo sapiens]
Length = 142
Score = 40.8 bits (94), Expect = 2e-04
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 20 HVKMLRLALTVTSMTFFIIAQ--------APEPYIVITGFEVTVILFFILLYVLRLDRLM 71
H +L++A VT + FI + A + V+T ++ +IL F L+++ R R++
Sbjct: 44 HAALLKVAQMVTLLIAFICVRSSLWTNYSAYSYFEVVTICDLIMILAFYLVHLFRFYRVL 103
Query: 72 KWLFWPLLVFALVTAVCCLADGALIYR 98
+ WPL +F + C+A L Y+
Sbjct: 104 TCISWPLSIFGFMATFLCMASIWLSYK 130
>gi|82546841 chemokine-like factor superfamily 5 isoform c [Homo
sapiens]
Length = 125
Score = 34.7 bits (78), Expect = 0.017
Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
Query: 11 RPFCFSVKGHVKMLRLALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFILLYVLRLDRL 70
+ F S KG + LALT+ + F + Y+ E + L F+ LY + +
Sbjct: 27 KAFLTSHKGILLETELALTL--IIFICFTASISAYMAAALLEFFITLAFLFLYATQYYQR 84
Query: 71 MKWLFWPLLVFALVTAVCCLADGALIYR 98
+ WP LVF ++ D IYR
Sbjct: 85 FDRINWPCLVFGIILVSIFAYDAFKIYR 112
>gi|21389567 chemokine-like factor superfamily 2 [Homo sapiens]
Length = 248
Score = 33.1 bits (74), Expect = 0.050
Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Query: 15 FSVKGH--VKMLRLALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFILLYVLRLDRLMK 72
F + GH +K+ L + +M +I E++ FFILLY + R +
Sbjct: 82 FWLLGHAEIKIRSLGCLIAAMILLSSLTVHPILRLIITMEISFFSFFILLYSFAIHRYIP 141
Query: 73 WLFWPLLVFALVTAVCCLADGALIY 97
++ WP+ C GA+++
Sbjct: 142 FILWPISDLFNDLIACAFLVGAVVF 166
>gi|19923929 CKLF-like MARVEL transmembrane domain containing 7
isoform a [Homo sapiens]
Length = 175
Score = 31.6 bits (70), Expect = 0.14
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 20 HVKMLRLALTVTSMTFFIIAQ--------APEPYIVITGFEVTVILFFILLYVLRLDRLM 71
H +L++A VT + FI + A + V+T ++ +IL F L+++ R R++
Sbjct: 44 HAALLKVAQMVTLLIAFICVRSSLWTNYSAYSYFEVVTICDLIMILAFYLVHLFRFYRVL 103
Query: 72 KWLFWPL--LVFALVTAVCCLADGALIYRKLLFNPSG 106
+ WPL L+ L+ + L +++ +N SG
Sbjct: 104 TCISWPLSELLHYLIGTLLLLI-ASIVAASKSYNQSG 139
>gi|115385972 chemokine-like factor superfamily 3 [Homo sapiens]
Length = 182
Score = 29.6 bits (65), Expect = 0.55
Identities = 22/96 (22%), Positives = 44/96 (45%), Gaps = 13/96 (13%)
Query: 11 RPFCFSVKGHVKMLRLALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFILLYVLRLDRL 70
R F S+KG + + L+ + ++ + A ++ E + L+F+ ++L+
Sbjct: 34 RAFLCSLKGRLLLAESGLSFITFICYVASSA-SAFLTAPLLEFLLALYFLFADAMQLNDK 92
Query: 71 MKWLFWP-----------LLVFAL-VTAVCCLADGA 94
+ L WP L+ FA+ +TA+ +DGA
Sbjct: 93 WQGLCWPMMDFLRCVTAALIYFAISITAIAKYSDGA 128
>gi|32130528 chemokine-like factor superfamily 3 [Homo sapiens]
Length = 182
Score = 29.6 bits (65), Expect = 0.55
Identities = 22/96 (22%), Positives = 44/96 (45%), Gaps = 13/96 (13%)
Query: 11 RPFCFSVKGHVKMLRLALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFILLYVLRLDRL 70
R F S+KG + + L+ + ++ + A ++ E + L+F+ ++L+
Sbjct: 34 RAFLCSLKGRLLLAESGLSFITFICYVASSA-SAFLTAPLLEFLLALYFLFADAMQLNDK 92
Query: 71 MKWLFWP-----------LLVFAL-VTAVCCLADGA 94
+ L WP L+ FA+ +TA+ +DGA
Sbjct: 93 WQGLCWPMMDFLRCVTAALIYFAISITAIAKYSDGA 128
>gi|32130526 chemokine-like factor superfamily 3 [Homo sapiens]
Length = 182
Score = 29.6 bits (65), Expect = 0.55
Identities = 22/96 (22%), Positives = 44/96 (45%), Gaps = 13/96 (13%)
Query: 11 RPFCFSVKGHVKMLRLALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFILLYVLRLDRL 70
R F S+KG + + L+ + ++ + A ++ E + L+F+ ++L+
Sbjct: 34 RAFLCSLKGRLLLAESGLSFITFICYVASSA-SAFLTAPLLEFLLALYFLFADAMQLNDK 92
Query: 71 MKWLFWP-----------LLVFAL-VTAVCCLADGA 94
+ L WP L+ FA+ +TA+ +DGA
Sbjct: 93 WQGLCWPMMDFLRCVTAALIYFAISITAIAKYSDGA 128
>gi|21389401 chemokine-like factor superfamily 3 [Homo sapiens]
Length = 182
Score = 29.6 bits (65), Expect = 0.55
Identities = 22/96 (22%), Positives = 44/96 (45%), Gaps = 13/96 (13%)
Query: 11 RPFCFSVKGHVKMLRLALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFILLYVLRLDRL 70
R F S+KG + + L+ + ++ + A ++ E + L+F+ ++L+
Sbjct: 34 RAFLCSLKGRLLLAESGLSFITFICYVASSA-SAFLTAPLLEFLLALYFLFADAMQLNDK 92
Query: 71 MKWLFWP-----------LLVFAL-VTAVCCLADGA 94
+ L WP L+ FA+ +TA+ +DGA
Sbjct: 93 WQGLCWPMMDFLRCVTAALIYFAISITAIAKYSDGA 128
>gi|22296884 transmembrane protein 185A [Homo sapiens]
Length = 350
Score = 27.3 bits (59), Expect = 2.7
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 4/36 (11%)
Query: 56 ILFFILLYVLRLDRLMKWLFW----PLLVFALVTAV 87
+L F +L LRLD +++W +W P+ ++ L+ V
Sbjct: 21 LLLFSVLLALRLDGIIQWSYWAVFAPIWLWKLMVIV 56
>gi|42542383 solute carrier family 28, member 1 isoform 2 [Homo
sapiens]
Length = 175
Score = 26.6 bits (57), Expect = 4.6
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 14/82 (17%)
Query: 3 NVQPKIKHRPFCFSVKGHVKMLR---LALTVTSMTFFIIAQAPEPYIVITGFEVTVILFF 59
N+QP ++ R FC + H+++ R L T ++ F++ + F+ + LF
Sbjct: 64 NLQPALRARSFC---REHMQLFRWIGTGLLCTGLSAFLLVAC------LLDFQRALALFV 114
Query: 60 ILLYVLRL--DRLMKWLFWPLL 79
+ VL RL+K L P L
Sbjct: 115 LTCVVLTFLGHRLLKRLLGPKL 136
>gi|42542381 solute carrier family 28, member 1 isoform 1 [Homo
sapiens]
Length = 649
Score = 26.6 bits (57), Expect = 4.6
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 14/82 (17%)
Query: 3 NVQPKIKHRPFCFSVKGHVKMLR---LALTVTSMTFFIIAQAPEPYIVITGFEVTVILFF 59
N+QP ++ R FC + H+++ R L T ++ F++ + F+ + LF
Sbjct: 64 NLQPALRARSFC---REHMQLFRWIGTGLLCTGLSAFLLVAC------LLDFQRALALFV 114
Query: 60 ILLYVLRL--DRLMKWLFWPLL 79
+ VL RL+K L P L
Sbjct: 115 LTCVVLTFLGHRLLKRLLGPKL 136
>gi|19923993 chemokine-like factor superfamily 5 isoform a [Homo
sapiens]
Length = 156
Score = 26.6 bits (57), Expect = 4.6
Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 11 RPFCFSVKGHVKMLRLALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFILLYVLRLDRL 70
+ F S KG + LALT+ + F + Y+ E + L F+ LY + +
Sbjct: 27 KAFLTSHKGILLETELALTL--IIFICFTASISAYMAAALLEFFITLAFLFLYATQYYQR 84
Query: 71 MKWLFWPLLVF 81
+ WP L F
Sbjct: 85 FDRINWPCLDF 95
>gi|19923621 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and
steroid delta-isomerase 7 isoform a [Homo sapiens]
Length = 369
Score = 26.2 bits (56), Expect = 6.1
Identities = 8/25 (32%), Positives = 20/25 (80%)
Query: 58 FFILLYVLRLDRLMKWLFWPLLVFA 82
+++L+++ L+ L++WL PL+++A
Sbjct: 292 YWLLVFLAALNALLQWLLRPLVLYA 316
>gi|53793669 olfactory receptor, family 10, subfamily G, member 3
[Homo sapiens]
Length = 313
Score = 26.2 bits (56), Expect = 6.1
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 14/83 (16%)
Query: 31 TSMTFFIIAQAPEPYIVITGFEVTVILFFILLYVL-RLDRLMKWL-FW--------PLLV 80
T +T FI+ P P + T F +FF L+Y+L +L L+ + W P+ +
Sbjct: 7 TLLTAFILTGIPYPLRLRTLF----FVFFFLIYILTQLGNLLILITVWADPRLHARPMYI 62
Query: 81 FALVTAVCCLADGALIYRKLLFN 103
F V +V ++ ++I +L+ N
Sbjct: 63 FLGVLSVIDMSISSIIVPRLMMN 85
>gi|171184433 outer dense fiber of sperm tails 4 [Homo sapiens]
Length = 257
Score = 25.8 bits (55), Expect = 7.9
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
Query: 54 TVILFFILLYVLRLDRLMK----WLF---WPLLVFALVTAVCCLADGALIYRKLLFNPSG 106
T++LF I +++ L+R + W + W +L+ A+ C + + +L +PSG
Sbjct: 158 TLMLFPINIWIFELERNVSIPIGWSYFIGWLVLILYFTCAILCYFNHKSFWSLILSHPSG 217
>gi|27886667 potassium voltage-gated channel, subfamily H, member 8
[Homo sapiens]
Length = 1107
Score = 25.8 bits (55), Expect = 7.9
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 34 TFFIIAQ-APEPYIVITGFEVTVILFFILLYVLRLDRLMKWL 74
T+FII A P+ ++ F VTV+ LL +RL RL++ L
Sbjct: 301 TWFIIDLIAALPFDLLYAFNVTVVSLVHLLKTVRLLRLLRLL 342
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.333 0.146 0.465
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,475,936
Number of Sequences: 37866
Number of extensions: 153510
Number of successful extensions: 504
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 485
Number of HSP's gapped (non-prelim): 26
length of query: 120
length of database: 18,247,518
effective HSP length: 89
effective length of query: 31
effective length of database: 14,877,444
effective search space: 461200764
effective search space used: 461200764
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.5 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.