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Search of human proteins with 32171249
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|32171249 prostaglandin H2 D-isomerase [Homo sapiens]
(190 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|32171249 prostaglandin H2 D-isomerase [Homo sapiens] 389 e-108
gi|38455402 lipocalin 2 [Homo sapiens] 102 3e-22
gi|42714611 lipocalin 15 [Homo sapiens] 86 2e-17
gi|4502067 alpha-1-microglobulin/bikunin preproprotein [Homo sap... 77 9e-15
gi|89886464 lipocalcin 12 [Homo sapiens] 68 4e-12
gi|169177936 PREDICTED: similar to hCG1795014 [Homo sapiens] 68 5e-12
gi|169179152 PREDICTED: similar to hCG1795014 [Homo sapiens] 68 5e-12
gi|169181274 PREDICTED: similar to hCG1795014 [Homo sapiens] 68 5e-12
gi|39573716 lipocalin 6 [Homo sapiens] 48 4e-06
gi|166197660 complement component 8, gamma polypeptide [Homo sap... 47 1e-05
gi|7657407 odorant binding protein 2B [Homo sapiens] 40 0.002
gi|7657405 odorant binding protein 2A precursor [Homo sapiens] 39 0.003
gi|4502163 apolipoprotein D precursor [Homo sapiens] 37 0.008
gi|34577087 ring finger protein 13 [Homo sapiens] 33 0.11
gi|6005864 ring finger protein 13 [Homo sapiens] 33 0.11
gi|62988357 lipocalin 8 [Homo sapiens] 33 0.15
gi|126116598 lipocalin 10 [Homo sapiens] 30 0.96
gi|226442963 jumonji, AT rich interactive domain 1C isoform 2 [H... 29 2.1
gi|109255243 jumonji, AT rich interactive domain 1C isoform 1 [H... 29 2.1
gi|226443002 jumonji, AT rich interactive domain 1D isoform 3 [H... 29 2.1
gi|33356560 jumonji, AT rich interactive domain 1D isoform 2 [Ho... 29 2.1
gi|226442991 jumonji, AT rich interactive domain 1D isoform 1 [H... 29 2.1
gi|126366080 regulator of G-protein signaling 9 isoform 2 [Homo ... 28 6.2
gi|126365761 regulator of G-protein signaling 9 isoform 1 [Homo ... 28 6.2
gi|118572603 ubinuclein 1 [Homo sapiens] 27 8.1
gi|118572601 ubinuclein 1 [Homo sapiens] 27 8.1
gi|239749752 PREDICTED: chromosome 10 open reading frame 112 [Ho... 27 8.1
gi|239744011 PREDICTED: chromosome 10 open reading frame 112 [Ho... 27 8.1
>gi|32171249 prostaglandin H2 D-isomerase [Homo sapiens]
Length = 190
Score = 389 bits (998), Expect = e-108
Identities = 190/190 (100%), Positives = 190/190 (100%)
Query: 1 MATHHTLWMGLALLGVLGDLQAAPEAQVSVQPNFQQDKFLGRWFSAGLASNSSWLREKKA 60
MATHHTLWMGLALLGVLGDLQAAPEAQVSVQPNFQQDKFLGRWFSAGLASNSSWLREKKA
Sbjct: 1 MATHHTLWMGLALLGVLGDLQAAPEAQVSVQPNFQQDKFLGRWFSAGLASNSSWLREKKA 60
Query: 61 ALSMCKSVVAPATDGGLNLTSTFLRKNQCETRTMLLQPAGSLGSYSYRSPHWGSTYSVSV 120
ALSMCKSVVAPATDGGLNLTSTFLRKNQCETRTMLLQPAGSLGSYSYRSPHWGSTYSVSV
Sbjct: 61 ALSMCKSVVAPATDGGLNLTSTFLRKNQCETRTMLLQPAGSLGSYSYRSPHWGSTYSVSV 120
Query: 121 VETDYDQYALLYSQGSKGPGEDFRMATLYSRTQTPRAELKEKFTAFCKAQGFTEDTIVFL 180
VETDYDQYALLYSQGSKGPGEDFRMATLYSRTQTPRAELKEKFTAFCKAQGFTEDTIVFL
Sbjct: 121 VETDYDQYALLYSQGSKGPGEDFRMATLYSRTQTPRAELKEKFTAFCKAQGFTEDTIVFL 180
Query: 181 PQTDKCMTEQ 190
PQTDKCMTEQ
Sbjct: 181 PQTDKCMTEQ 190
>gi|38455402 lipocalin 2 [Homo sapiens]
Length = 198
Score = 102 bits (253), Expect = 3e-22
Identities = 69/193 (35%), Positives = 103/193 (53%), Gaps = 14/193 (7%)
Query: 7 LWMGLALLGVL--------GDLQAAPE-AQVSVQPNFQQDKFLGRWFSAGLASNSSWLRE 57
LW+GLALLG L DL AP ++V +Q NFQ ++F G+W+ GLA N+ LRE
Sbjct: 6 LWLGLALLGALHAQAQDSTSDLIPAPPLSKVPLQQNFQDNQFQGKWYVVGLAGNAI-LRE 64
Query: 58 KKAALSMCKSVVAPATDGGLNLTSTFLRKNQCETRTMLLQPAGSLGSYSY---RSPHWGS 114
K M ++ D N+TS RK +C+ P G ++ +S +
Sbjct: 65 DKDPQKMYATIYELKEDKSYNVTSVLFRKKKCDYWIRTFVPGCQPGEFTLGNIKSYPGLT 124
Query: 115 TYSVSVVETDYDQYALLYSQGSKGPGEDFRMATLYSRTQTPRAELKEKFTAFCKAQGFTE 174
+Y V VV T+Y+Q+A+++ + E F++ TLY RT+ +ELKE F F K+ G E
Sbjct: 125 SYLVRVVSTNYNQHAMVFFKKVSQNREYFKI-TLYGRTKELTSELKENFIRFSKSLGLPE 183
Query: 175 DTIVFLPQTDKCM 187
+ IVF D+C+
Sbjct: 184 NHIVFPVPIDQCI 196
>gi|42714611 lipocalin 15 [Homo sapiens]
Length = 184
Score = 85.9 bits (211), Expect = 2e-17
Identities = 62/179 (34%), Positives = 84/179 (46%), Gaps = 6/179 (3%)
Query: 13 LLGVLGDLQAAPEAQVSV--QPNFQQDKFLGRWFSAGLASNSSWLREKKAALSMCKSVVA 70
LLG + L AP AQ V QP+F +KF G W+ +AS+ KK LSM +
Sbjct: 5 LLGAILTLLWAPTAQAEVLLQPDFNAEKFSGLWYVVSMASDCRVFLGKKDHLSMSTRAIR 64
Query: 71 PATDGGLNLTSTFLRKNQCETRTMLLQPAGSLGSYSYRSPHWGSTYSVSVVETDYDQYAL 130
P +GGL++ F + C GS G +R P G V +V+TDY +A+
Sbjct: 65 PTEEGGLHVHMEFPGADGCNQVDAEYLKVGSEG--HFRVPALG-YLDVRIVDTDYSSFAV 121
Query: 131 LYSQGSKGPGEDFRMATLYSRTQTPRAELKEKFTAFCKAQGFTEDTIVFLPQTDKCMTE 189
LY + G M LYSRTQ + + F F G +D +V LPQ+D C E
Sbjct: 122 LYIY-KELEGALSTMVQLYSRTQDVSPQALKSFQDFYPTLGLPKDMMVMLPQSDACNPE 179
>gi|4502067 alpha-1-microglobulin/bikunin preproprotein [Homo
sapiens]
Length = 352
Score = 77.0 bits (188), Expect = 9e-15
Identities = 46/177 (25%), Positives = 77/177 (43%), Gaps = 1/177 (0%)
Query: 12 ALLGVLGDLQAAPEAQVSVQPNFQQDKFLGRWFSAGLASNSSWLREKKAALSMCKSVVAP 71
A L V P + VQ NF + G+W++ + S WL++ +++ V+
Sbjct: 13 ACLAVSAGPVPTPPDNIQVQENFNISRIYGKWYNLAIGSTCPWLKKIMDRMTVSTLVLGE 72
Query: 72 -ATDGGLNLTSTFLRKNQCETRTMLLQPAGSLGSYSYRSPHWGSTYSVSVVETDYDQYAL 130
AT+ +++TST RK CE + + + G + Y W T VV T+YD+YA+
Sbjct: 73 GATEAEISMTSTRWRKGVCEETSGAYEKTDTDGKFLYHKSKWNITMESYVVHTNYDEYAI 132
Query: 131 LYSQGSKGPGEDFRMATLYSRTQTPRAELKEKFTAFCKAQGFTEDTIVFLPQTDKCM 187
++ A LY R R L + F + G ED+I + +C+
Sbjct: 133 FLTKKFSRHHGPTITAKLYGRAPQLRETLLQDFRVVAQGVGIPEDSIFTMADRGECV 189
>gi|89886464 lipocalcin 12 [Homo sapiens]
Length = 192
Score = 68.2 bits (165), Expect = 4e-12
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 4/175 (2%)
Query: 7 LWMGLALLGVLGDLQAAPEAQVSVQPNFQQDKFLGRWFSAGLASNSSWLREKKAALSMCK 66
LW+ L+LL VL P +FQ ++F G WF GLA N S+ E +A L+
Sbjct: 7 LWLWLSLLKVLQAQTPTPLPLPPPMQSFQGNQFQGEWFVLGLAGN-SFRPEHRALLNAFT 65
Query: 67 SVVAPATDGGLNLTSTFLRKNQCETRTMLLQPAGSLGSYS--YRSPHWGSTYSVSVVETD 124
+ + DG + + R C+T + +L PA G ++ + VV++D
Sbjct: 66 ATFELSDDGRFEVWNAMTRGQHCDTWSYVLIPAAQPGQFTVDHGVEPGADREETRVVDSD 125
Query: 125 YDQYALLYSQGSKGPGEDFRMATLYSRTQTPRAELKEKFTAFCKAQGFTEDTIVF 179
Y Q+AL+ S+ R++ L P L ++F +AQG ++D IVF
Sbjct: 126 YTQFALMLSRRHTSRLAVLRISLLGRSWLLPPGTL-DQFICLGRAQGLSDDNIVF 179
>gi|169177936 PREDICTED: similar to hCG1795014 [Homo sapiens]
Length = 181
Score = 67.8 bits (164), Expect = 5e-12
Identities = 45/159 (28%), Positives = 71/159 (44%), Gaps = 8/159 (5%)
Query: 29 SVQPNFQQDKFLGRWFSAGLASNSSWLREKKAALSMCKSVVAPATDGGLNLTSTFLRKNQ 88
+V NF K G W+S LAS+ E+ ++ V D N + TF
Sbjct: 23 AVTSNFDLSKISGEWYSVLLASDCREKIEEDGSMR----VFVKHIDYLGNSSLTFKLNGN 78
Query: 89 CETRTMLLQPAGSLGSYSYRSPHWGSTYSVSVVETDYDQYALLYSQGSKGPGEDFRMATL 148
C + +P + S + + ++ETDYD Y Y++ K GE F M L
Sbjct: 79 CTEINLACKPTEK---NAICSTDYNGLNVIDILETDYDNYIYFYNKNIKN-GETFLMLEL 134
Query: 149 YSRTQTPRAELKEKFTAFCKAQGFTEDTIVFLPQTDKCM 187
Y RT ++LKE+F +C+ G ++ I L + D+C+
Sbjct: 135 YVRTPDVSSQLKERFVKYCEEHGIDKENIFDLTKVDRCL 173
>gi|169179152 PREDICTED: similar to hCG1795014 [Homo sapiens]
Length = 181
Score = 67.8 bits (164), Expect = 5e-12
Identities = 45/159 (28%), Positives = 71/159 (44%), Gaps = 8/159 (5%)
Query: 29 SVQPNFQQDKFLGRWFSAGLASNSSWLREKKAALSMCKSVVAPATDGGLNLTSTFLRKNQ 88
+V NF K G W+S LAS+ E+ ++ V D N + TF
Sbjct: 23 AVTSNFDLSKISGEWYSVLLASDCREKIEEDGSMR----VFVKHIDYLGNSSLTFKLNGN 78
Query: 89 CETRTMLLQPAGSLGSYSYRSPHWGSTYSVSVVETDYDQYALLYSQGSKGPGEDFRMATL 148
C + +P + S + + ++ETDYD Y Y++ K GE F M L
Sbjct: 79 CTEINLACKPTEK---NAICSTDYNGLNVIDILETDYDNYIYFYNKNIKN-GETFLMLEL 134
Query: 149 YSRTQTPRAELKEKFTAFCKAQGFTEDTIVFLPQTDKCM 187
Y RT ++LKE+F +C+ G ++ I L + D+C+
Sbjct: 135 YVRTPDVSSQLKERFVKYCEEHGIDKENIFDLTKVDRCL 173
>gi|169181274 PREDICTED: similar to hCG1795014 [Homo sapiens]
Length = 181
Score = 67.8 bits (164), Expect = 5e-12
Identities = 45/159 (28%), Positives = 71/159 (44%), Gaps = 8/159 (5%)
Query: 29 SVQPNFQQDKFLGRWFSAGLASNSSWLREKKAALSMCKSVVAPATDGGLNLTSTFLRKNQ 88
+V NF K G W+S LAS+ E+ ++ V D N + TF
Sbjct: 23 AVTSNFDLSKISGEWYSVLLASDCREKIEEDGSMR----VFVKHIDYLGNSSLTFKLNGN 78
Query: 89 CETRTMLLQPAGSLGSYSYRSPHWGSTYSVSVVETDYDQYALLYSQGSKGPGEDFRMATL 148
C + +P + S + + ++ETDYD Y Y++ K GE F M L
Sbjct: 79 CTEINLACKPTEK---NAICSTDYNGLNVIDILETDYDNYIYFYNKNIKN-GETFLMLEL 134
Query: 149 YSRTQTPRAELKEKFTAFCKAQGFTEDTIVFLPQTDKCM 187
Y RT ++LKE+F +C+ G ++ I L + D+C+
Sbjct: 135 YVRTPDVSSQLKERFVKYCEEHGIDKENIFDLTKVDRCL 173
>gi|39573716 lipocalin 6 [Homo sapiens]
Length = 163
Score = 48.1 bits (113), Expect = 4e-06
Identities = 42/164 (25%), Positives = 68/164 (41%), Gaps = 4/164 (2%)
Query: 9 MGLALLGVLGDLQAAPEAQVSVQPNFQQDKFLGRWFSAGLASNSSWLREKKAALSMCKSV 68
MG LL L + P AQ ++ LG W+ +AS +K ++ V
Sbjct: 1 MGGLLLAAFLALVSVPRAQAVWLGRLDPEQLLGPWYVLAVASREKGFAMEKDMKNVVGVV 60
Query: 69 VAPATDGGLNLTSTFLRKNQCETRTMLLQPAGSLGSYSYRSPHWGSTYSVSVVETDYDQY 128
V + L S+ C+ M L S + + +P G + V+ T++ Y
Sbjct: 61 VTLTPENNLRTLSSQHGLGGCDQSVMDLIKRNS--GWVFENPSIG-VLELWVLATNFRDY 117
Query: 129 ALLYSQGSKGPGEDFRMATLYSRTQTPRAELKEKFTAFCKAQGF 172
A++++Q G E F LYS T+T E FT + ++ GF
Sbjct: 118 AIIFTQLEFG-DEPFNTVELYSLTETASQEAMGLFTKWSRSLGF 160
>gi|166197660 complement component 8, gamma polypeptide [Homo
sapiens]
Length = 202
Score = 46.6 bits (109), Expect = 1e-05
Identities = 50/189 (26%), Positives = 75/189 (39%), Gaps = 11/189 (5%)
Query: 2 ATHHTLWMGLALLGVLGDLQAAPEAQVS-VQP--NFQQDKFLGRWFSAGLASNSSWLREK 58
AT TL + LG P + +S +QP NF +F G W + S +L+E+
Sbjct: 7 ATLLTLLLAAGSLGQKPQRPRRPASPISTIQPKANFDAQQFAGTWLLVAVGSACRFLQEQ 66
Query: 59 KAALSMCKSVVAPATDGGLNLTSTFLRKNQ-CETRTMLLQPAGSLGSYSYRSPHWGSTYS 117
VAP G STF + + C L G LG + ++
Sbjct: 67 GHRAEATTLHVAP--QGTAMAVSTFRKLDGICWQVRQLYGDTGVLGRFLLQARDARGAVH 124
Query: 118 VSVVETDYDQYALLYSQGSKGPGEDFRMATLYSRTQTPRAELKEKFTAFCKAQGFTEDTI 177
V V ETDY +A+LY + + G+ LY+R+ + F + TED I
Sbjct: 125 VVVAETDYQSFAVLYLERA---GQ--LSVKLYARSLPVSDSVLSGFEQRVQEAHLTEDQI 179
Query: 178 VFLPQTDKC 186
+ P+ C
Sbjct: 180 FYFPKYGFC 188
>gi|7657407 odorant binding protein 2B [Homo sapiens]
Length = 170
Score = 39.7 bits (91), Expect = 0.002
Identities = 33/156 (21%), Positives = 64/156 (41%), Gaps = 8/156 (5%)
Query: 35 QQDKFLGRWFSAGLASNSSWLREKKAALSMCKSVVAPATDGG-LNLTSTFLRKNQCETRT 93
+++ G W+ + + + +++ V A GG L T TF+R+++C +
Sbjct: 21 EEEDITGTWYVKAMVVDKDFPEDRRPR--KVSPVKVTALGGGKLEATFTFMREDRCIQKK 78
Query: 94 MLLQPAGSLGSYSYRSPHWGSTYSVSVVETDYDQYALLYSQGSKGPGEDFRMATLYSRTQ 153
+L++ G YS +G + + E + + Y + + G M L R
Sbjct: 79 ILMRKTEEPGKYS----AYGGRKLMYLQELPRRDHYIFYCK-DQHHGGLLHMGKLVGRNS 133
Query: 154 TPRAELKEKFTAFCKAQGFTEDTIVFLPQTDKCMTE 189
E E+F + +G +E+ I QT C+ E
Sbjct: 134 DTNREALEEFKKLVQRKGLSEEDIFTPLQTGSCVPE 169
>gi|7657405 odorant binding protein 2A precursor [Homo sapiens]
Length = 170
Score = 38.9 bits (89), Expect = 0.003
Identities = 31/155 (20%), Positives = 63/155 (40%), Gaps = 6/155 (3%)
Query: 35 QQDKFLGRWFSAGLASNSSWLREKKAALSMCKSVVAPATDGGLNLTSTFLRKNQCETRTM 94
+++ G W+ + + + +++ V A G L T TF+R+++C + +
Sbjct: 21 EEEDITGTWYVKAMVVDKDFPEDRRPRKVSPVKVTALG-GGNLEATFTFMREDRCIQKKI 79
Query: 95 LLQPAGSLGSYSYRSPHWGSTYSVSVVETDYDQYALLYSQGSKGPGEDFRMATLYSRTQT 154
L++ G +S +G + + E + Y + + G + M L R
Sbjct: 80 LMRKTEEPGKFS----AYGGRKLIYLQELPGTDDYVFYCKDQRRGGLRY-MGKLVGRNPN 134
Query: 155 PRAELKEKFTAFCKAQGFTEDTIVFLPQTDKCMTE 189
E E+F + +G +E+ I QT C+ E
Sbjct: 135 TNLEALEEFKKLVQHKGLSEEDIFMPLQTGSCVLE 169
>gi|4502163 apolipoprotein D precursor [Homo sapiens]
Length = 189
Score = 37.4 bits (85), Expect = 0.008
Identities = 38/138 (27%), Positives = 58/138 (42%), Gaps = 20/138 (14%)
Query: 9 MGLALLGVLGDLQAAPEAQV---------SVQPNFQQDKFLGRWFS-AGLASNSSWLREK 58
M L LL L L A E Q VQ NF +K+LGRW+ + + R
Sbjct: 3 MLLLLLSALAGLFGAAEGQAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFENGRCI 62
Query: 59 KAALSMCKSVVAPATDGGLNLTSTFLRKNQCETRTMLLQPAGSLGSYSY---RSPHWGST 115
+A S+ ++ + L T + T L +PA +S+ +P+W
Sbjct: 63 QANYSLMENGKIKVLNQELRADGTVNQIEGEATPVNLTEPAKLEVKFSWFMPSAPYW--- 119
Query: 116 YSVSVVETDYDQYALLYS 133
++ TDY+ YAL+YS
Sbjct: 120 ----ILATDYENYALVYS 133
>gi|34577087 ring finger protein 13 [Homo sapiens]
Length = 381
Score = 33.5 bits (75), Expect = 0.11
Identities = 17/74 (22%), Positives = 34/74 (45%)
Query: 54 WLREKKAALSMCKSVVAPATDGGLNLTSTFLRKNQCETRTMLLQPAGSLGSYSYRSPHWG 113
WL + K +CK V P+ + T + +N+ T LL+P S+ + S+ +
Sbjct: 270 WLTKTKKTCPVCKQKVVPSQGDSDSDTDSSQEENEVTEHTPLLRPLASVSAQSFGALSES 329
Query: 114 STYSVSVVETDYDQ 127
++ +DY++
Sbjct: 330 RSHQNMTESSDYEE 343
>gi|6005864 ring finger protein 13 [Homo sapiens]
Length = 381
Score = 33.5 bits (75), Expect = 0.11
Identities = 17/74 (22%), Positives = 34/74 (45%)
Query: 54 WLREKKAALSMCKSVVAPATDGGLNLTSTFLRKNQCETRTMLLQPAGSLGSYSYRSPHWG 113
WL + K +CK V P+ + T + +N+ T LL+P S+ + S+ +
Sbjct: 270 WLTKTKKTCPVCKQKVVPSQGDSDSDTDSSQEENEVTEHTPLLRPLASVSAQSFGALSES 329
Query: 114 STYSVSVVETDYDQ 127
++ +DY++
Sbjct: 330 RSHQNMTESSDYEE 343
>gi|62988357 lipocalin 8 [Homo sapiens]
Length = 152
Score = 33.1 bits (74), Expect = 0.15
Identities = 31/145 (21%), Positives = 59/145 (40%), Gaps = 14/145 (9%)
Query: 36 QDKFLGRWFSAGLASNSSWLREKKAALSMCKSVVAPATDGGLNLTSTFLRKNQCETRTML 95
+ K G W G+AS+ S + A + + + L + + CE ++
Sbjct: 6 RQKIGGFWREVGVASDQSLVL---TAPKRVEGLFLTLSGSNLTVKVAYNSSGSCEIEKIV 62
Query: 96 LQPAGSLGSYSYRSPHWGSTYSVSVVETDYDQYALLYSQGSKGPGEDFRMATLYSRTQTP 155
S G +++ + V++TDY+ YA+L G +FR+ ++R+
Sbjct: 63 GSEIDSTGKFAFPGHR-----EIHVLDTDYEGYAIL-RVSLMWRGRNFRVLKYFTRSLED 116
Query: 156 RAELKEKFTAFCKAQGFTEDTIVFL 180
+ L F K + T DT ++L
Sbjct: 117 KDRL-----GFWKFRELTADTGLYL 136
>gi|126116598 lipocalin 10 [Homo sapiens]
Length = 200
Score = 30.4 bits (67), Expect = 0.96
Identities = 29/152 (19%), Positives = 61/152 (40%), Gaps = 12/152 (7%)
Query: 37 DKFLGRWFSAGLASNSSWLREKKAALSMCKSVVAPATDGGLNLTSTFLRKNQCETRTMLL 96
+KF G W+ A+++ + + SVV G L + F R C+++ ++L
Sbjct: 38 NKFSGFWYILATATDAQGFLPARDKRKLGASVVKVNKVGQLRVLLAFRRLKGCQSQEVIL 97
Query: 97 QPAGSLGSYS-----YRSPHWG-----STYSVSVVETDYDQYALLYSQGSKGPGEDFRMA 146
+ G + P G + V+ TDY Y L+Y + + ++++
Sbjct: 98 RKDGKKPVFGNACAYAAGPREGQEGVKGVKAFHVLSTDY-SYGLVYLRLGRAT-QNYKNL 155
Query: 147 TLYSRTQTPRAELKEKFTAFCKAQGFTEDTIV 178
L+ R + ++F C G ++ ++
Sbjct: 156 LLFHRQNVSSFQSLKEFMDACDILGLSKAAVI 187
>gi|226442963 jumonji, AT rich interactive domain 1C isoform 2 [Homo
sapiens]
Length = 1379
Score = 29.3 bits (64), Expect = 2.1
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 80 TSTFLRKNQCETRTMLLQPAGSLGSYSYRSPHW 112
+ TFL+KN C T +L P GS S + W
Sbjct: 1019 SKTFLKKNSCYTLLEVLCPCADAGSDSTKRSRW 1051
>gi|109255243 jumonji, AT rich interactive domain 1C isoform 1 [Homo
sapiens]
Length = 1560
Score = 29.3 bits (64), Expect = 2.1
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 80 TSTFLRKNQCETRTMLLQPAGSLGSYSYRSPHW 112
+ TFL+KN C T +L P GS S + W
Sbjct: 1086 SKTFLKKNSCYTLLEVLCPCADAGSDSTKRSRW 1118
>gi|226443002 jumonji, AT rich interactive domain 1D isoform 3 [Homo
sapiens]
Length = 1482
Score = 29.3 bits (64), Expect = 2.1
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 80 TSTFLRKNQCETRTMLLQPAGSLGSYSYRSPHW 112
+ TFL+KN C T +L P GS S + W
Sbjct: 1016 SKTFLKKNSCYTLLEVLCPCADAGSDSTKRSRW 1048
>gi|33356560 jumonji, AT rich interactive domain 1D isoform 2 [Homo
sapiens]
Length = 1539
Score = 29.3 bits (64), Expect = 2.1
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 80 TSTFLRKNQCETRTMLLQPAGSLGSYSYRSPHW 112
+ TFL+KN C T +L P GS S + W
Sbjct: 1073 SKTFLKKNSCYTLLEVLCPCADAGSDSTKRSRW 1105
>gi|226442991 jumonji, AT rich interactive domain 1D isoform 1 [Homo
sapiens]
Length = 1570
Score = 29.3 bits (64), Expect = 2.1
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 80 TSTFLRKNQCETRTMLLQPAGSLGSYSYRSPHW 112
+ TFL+KN C T +L P GS S + W
Sbjct: 1104 SKTFLKKNSCYTLLEVLCPCADAGSDSTKRSRW 1136
>gi|126366080 regulator of G-protein signaling 9 isoform 2 [Homo
sapiens]
Length = 671
Score = 27.7 bits (60), Expect = 6.2
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 90 ETRTMLLQPAGSLGSYSYRSPHWGSTYSVSVVETDYDQYALLYSQGSKGPGEDF 143
+ + ++L+P GSL Y +++P++ T +TDY Y + KG E++
Sbjct: 88 DPKNLILKPDGSL--YRFQTPYFWPTQQWPAEDTDYAIYLAKRNIKKKGILEEY 139
>gi|126365761 regulator of G-protein signaling 9 isoform 1 [Homo
sapiens]
Length = 674
Score = 27.7 bits (60), Expect = 6.2
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 90 ETRTMLLQPAGSLGSYSYRSPHWGSTYSVSVVETDYDQYALLYSQGSKGPGEDF 143
+ + ++L+P GSL Y +++P++ T +TDY Y + KG E++
Sbjct: 88 DPKNLILKPDGSL--YRFQTPYFWPTQQWPAEDTDYAIYLAKRNIKKKGILEEY 139
>gi|118572603 ubinuclein 1 [Homo sapiens]
Length = 1134
Score = 27.3 bits (59), Expect = 8.1
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Query: 70 APATDGGLNLTSTFLRKNQCETRTMLLQPA-----GSLGSYSYRSPHWGSTYS 117
APAT GGL+ +S+ K + + L PA S GS SY++ + S+ S
Sbjct: 858 APATSGGLSASSSSSHKTPASSSSALSHPAKPHSVSSAGS-SYKNNPFASSIS 909
>gi|118572601 ubinuclein 1 [Homo sapiens]
Length = 1134
Score = 27.3 bits (59), Expect = 8.1
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Query: 70 APATDGGLNLTSTFLRKNQCETRTMLLQPA-----GSLGSYSYRSPHWGSTYS 117
APAT GGL+ +S+ K + + L PA S GS SY++ + S+ S
Sbjct: 858 APATSGGLSASSSSSHKTPASSSSALSHPAKPHSVSSAGS-SYKNNPFASSIS 909
>gi|239749752 PREDICTED: chromosome 10 open reading frame 112 [Homo
sapiens]
Length = 1817
Score = 27.3 bits (59), Expect = 8.1
Identities = 35/148 (23%), Positives = 55/148 (37%), Gaps = 27/148 (18%)
Query: 17 LGDLQAAPEAQVS--------VQPNFQQDKFLGR---WFSAGLASNSSWLREKKAALSMC 65
L D+ + E ++S Q F + F WF A + W+R ++ LS
Sbjct: 266 LDDISVSQECEISYKSLPRTSTQSKFSKCDFEANSCDWFEAISGDHFDWIRSSQSELSAD 325
Query: 66 KSVVAPATDGGLNLTS----TFLRKNQCETRTMLLQ-PAGSLGSYSYRSPHWGSTYSVSV 120
AP D LN + L+K+ + LQ P S W Y +SV
Sbjct: 326 FEHQAPPRDHSLNASQGHFMFILKKSSSLWQVAKLQSPTFSQTGPGCILSFWFYNYGLSV 385
Query: 121 --------VETDYDQ---YALLYSQGSK 137
+E +D + +LY+QG +
Sbjct: 386 GAAELQLHMENSHDSTVIWRVLYNQGKQ 413
>gi|239744011 PREDICTED: chromosome 10 open reading frame 112 [Homo
sapiens]
Length = 1817
Score = 27.3 bits (59), Expect = 8.1
Identities = 35/148 (23%), Positives = 55/148 (37%), Gaps = 27/148 (18%)
Query: 17 LGDLQAAPEAQVS--------VQPNFQQDKFLGR---WFSAGLASNSSWLREKKAALSMC 65
L D+ + E ++S Q F + F WF A + W+R ++ LS
Sbjct: 266 LDDISVSQECEISYKSLPRTSTQSKFSKCDFEANSCDWFEAISGDHFDWIRSSQSELSAD 325
Query: 66 KSVVAPATDGGLNLTS----TFLRKNQCETRTMLLQ-PAGSLGSYSYRSPHWGSTYSVSV 120
AP D LN + L+K+ + LQ P S W Y +SV
Sbjct: 326 FEHQAPPRDHSLNASQGHFMFILKKSSSLWQVAKLQSPTFSQTGPGCILSFWFYNYGLSV 385
Query: 121 --------VETDYDQ---YALLYSQGSK 137
+E +D + +LY+QG +
Sbjct: 386 GAAELQLHMENSHDSTVIWRVLYNQGKQ 413
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.129 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,363,633
Number of Sequences: 37866
Number of extensions: 298273
Number of successful extensions: 555
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 520
Number of HSP's gapped (non-prelim): 28
length of query: 190
length of database: 18,247,518
effective HSP length: 96
effective length of query: 94
effective length of database: 14,612,382
effective search space: 1373563908
effective search space used: 1373563908
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.