Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 31982881
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|31982881 CAP-GLY domain containing linker protein family,
member 4 [Homo sapiens]
(705 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|31982881 CAP-GLY domain containing linker protein family, mem... 1412 0.0
gi|18496983 CAP-GLY domain containing linker protein 3 [Homo sap... 496 e-140
gi|38044112 restin isoform b [Homo sapiens] 173 6e-43
gi|4506751 restin isoform a [Homo sapiens] 173 6e-43
gi|116008447 CAP-GLY domain containing linker protein 2 isoform ... 149 1e-35
gi|14702162 CAP-GLY domain containing linker protein 2 isoform 2... 149 1e-35
gi|171184451 centrosome-associated protein 350 [Homo sapiens] 94 4e-19
gi|46852172 kinesin family member 13B [Homo sapiens] 85 2e-16
gi|13259510 dynactin 1 isoform 1 [Homo sapiens] 83 8e-16
gi|205277392 dynactin 1 isoform 3 [Homo sapiens] 78 3e-14
gi|50428925 cytoskeleton associated protein 1 [Homo sapiens] 77 7e-14
gi|53832024 nuclear factor of kappa light polypeptide gene enhan... 51 4e-06
gi|13899229 nuclear factor of kappa light polypeptide gene enhan... 51 4e-06
gi|118442828 beta-tubulin cofactor E [Homo sapiens] 50 9e-06
gi|4507375 beta-tubulin cofactor E [Homo sapiens] 50 9e-06
gi|116875852 HECT domain and ankyrin repeat containing, E3 ubiqu... 48 4e-05
gi|18079216 CASK interacting protein 1 [Homo sapiens] 47 5e-05
gi|156142199 euchromatic histone-lysine N-methyltransferase 2 is... 46 1e-04
gi|156142197 euchromatic histone-lysine N-methyltransferase 2 is... 46 1e-04
gi|140161500 ankyrin repeat and sterile alpha motif domain conta... 45 2e-04
gi|68131557 ankyrin repeat domain 28 [Homo sapiens] 44 4e-04
gi|188595682 ankyrin 2 isoform 3 [Homo sapiens] 44 4e-04
gi|52426737 ankyrin 2 isoform 2 [Homo sapiens] 44 4e-04
gi|52426735 ankyrin 2 isoform 1 [Homo sapiens] 44 4e-04
gi|56676397 ankyrin repeat domain 11 [Homo sapiens] 44 4e-04
gi|38176283 ankyrin repeat and SOCS box-containing protein 7 iso... 44 5e-04
gi|30089994 ankyrin repeat and SOCS box-containing protein 7 iso... 44 5e-04
gi|134948605 ankyrin repeat domain 12 isoform 2 [Homo sapiens] 44 7e-04
gi|134948558 ankyrin repeat domain 12 isoform 1 [Homo sapiens] 44 7e-04
gi|87239981 tankyrase, TRF1-interacting ankyrin-related ADP-ribo... 43 9e-04
>gi|31982881 CAP-GLY domain containing linker protein family, member
4 [Homo sapiens]
Length = 705
Score = 1412 bits (3656), Expect = 0.0
Identities = 705/705 (100%), Positives = 705/705 (100%)
Query: 1 MTIEDLPDFPLEGNPLFGRYPFIFSASDTPVIFSISAAPMPSDCEFSFFDPNDASCQEIL 60
MTIEDLPDFPLEGNPLFGRYPFIFSASDTPVIFSISAAPMPSDCEFSFFDPNDASCQEIL
Sbjct: 1 MTIEDLPDFPLEGNPLFGRYPFIFSASDTPVIFSISAAPMPSDCEFSFFDPNDASCQEIL 60
Query: 61 FDPKTSVSELFAILRQWVPQVQQNIDIIGNEILKRGCNVNDRDGLTDMTLLHYTCKSGAH 120
FDPKTSVSELFAILRQWVPQVQQNIDIIGNEILKRGCNVNDRDGLTDMTLLHYTCKSGAH
Sbjct: 61 FDPKTSVSELFAILRQWVPQVQQNIDIIGNEILKRGCNVNDRDGLTDMTLLHYTCKSGAH 120
Query: 121 GIGDVETAVKFATQLIDLGADISLRSRWTNMNALHYAAYFDVPELIRVILKTSKPKDVDA 180
GIGDVETAVKFATQLIDLGADISLRSRWTNMNALHYAAYFDVPELIRVILKTSKPKDVDA
Sbjct: 121 GIGDVETAVKFATQLIDLGADISLRSRWTNMNALHYAAYFDVPELIRVILKTSKPKDVDA 180
Query: 181 TCSDFNFGTALHIAAYNLCAGAVKCLLEQGANPAFRNDKGQIPADVVPDPVDMPLEMADA 240
TCSDFNFGTALHIAAYNLCAGAVKCLLEQGANPAFRNDKGQIPADVVPDPVDMPLEMADA
Sbjct: 181 TCSDFNFGTALHIAAYNLCAGAVKCLLEQGANPAFRNDKGQIPADVVPDPVDMPLEMADA 240
Query: 241 AATAKEIKQMLLDAVPLSCNISKAMLPNYDHVTGKAMLTSLGLKLGDRVVIAGQKVGTLR 300
AATAKEIKQMLLDAVPLSCNISKAMLPNYDHVTGKAMLTSLGLKLGDRVVIAGQKVGTLR
Sbjct: 241 AATAKEIKQMLLDAVPLSCNISKAMLPNYDHVTGKAMLTSLGLKLGDRVVIAGQKVGTLR 300
Query: 301 FCGTTEFASGQWAGIELDEPEGKNNGSVGKVQYFKCAPKYGIFAPLSKISKAKGRRKNIT 360
FCGTTEFASGQWAGIELDEPEGKNNGSVGKVQYFKCAPKYGIFAPLSKISKAKGRRKNIT
Sbjct: 301 FCGTTEFASGQWAGIELDEPEGKNNGSVGKVQYFKCAPKYGIFAPLSKISKAKGRRKNIT 360
Query: 361 HTPSTKAAVPLIRSQKIDVAHVTSKVNTGLMTSKKDSASESTLSLPPGEELKTVTEKDVA 420
HTPSTKAAVPLIRSQKIDVAHVTSKVNTGLMTSKKDSASESTLSLPPGEELKTVTEKDVA
Sbjct: 361 HTPSTKAAVPLIRSQKIDVAHVTSKVNTGLMTSKKDSASESTLSLPPGEELKTVTEKDVA 420
Query: 421 LLGSVSSCSSTSSLEHRQSYPKKQNAISSNKKTMSKSPSLSSRASAGLNSSATSTANNSR 480
LLGSVSSCSSTSSLEHRQSYPKKQNAISSNKKTMSKSPSLSSRASAGLNSSATSTANNSR
Sbjct: 421 LLGSVSSCSSTSSLEHRQSYPKKQNAISSNKKTMSKSPSLSSRASAGLNSSATSTANNSR 480
Query: 481 CEGELRLGERVLVVGQRLGTIRFFGTTNFAPGYWYGIELEKPHGKNDGSVGGVQYFSCSP 540
CEGELRLGERVLVVGQRLGTIRFFGTTNFAPGYWYGIELEKPHGKNDGSVGGVQYFSCSP
Sbjct: 481 CEGELRLGERVLVVGQRLGTIRFFGTTNFAPGYWYGIELEKPHGKNDGSVGGVQYFSCSP 540
Query: 541 RYGIFAPPSRVQRVTDSLDTLSEISSNKQNHSYPGFRRSFSTTSASSQKEINRRNAFSKS 600
RYGIFAPPSRVQRVTDSLDTLSEISSNKQNHSYPGFRRSFSTTSASSQKEINRRNAFSKS
Sbjct: 541 RYGIFAPPSRVQRVTDSLDTLSEISSNKQNHSYPGFRRSFSTTSASSQKEINRRNAFSKS 600
Query: 601 KAALRRSWSSTPTAGGIEGSVKLHEGSQVLLTSSNEMGTVRYVGPTDFASGIWLGLELRS 660
KAALRRSWSSTPTAGGIEGSVKLHEGSQVLLTSSNEMGTVRYVGPTDFASGIWLGLELRS
Sbjct: 601 KAALRRSWSSTPTAGGIEGSVKLHEGSQVLLTSSNEMGTVRYVGPTDFASGIWLGLELRS 660
Query: 661 AKGKNDGSVGDKRYFTCKPNHGVLVRPSRVTYRGINGSKLVDENC 705
AKGKNDGSVGDKRYFTCKPNHGVLVRPSRVTYRGINGSKLVDENC
Sbjct: 661 AKGKNDGSVGDKRYFTCKPNHGVLVRPSRVTYRGINGSKLVDENC 705
>gi|18496983 CAP-GLY domain containing linker protein 3 [Homo
sapiens]
Length = 547
Score = 496 bits (1277), Expect = e-140
Identities = 242/394 (61%), Positives = 302/394 (76%), Gaps = 8/394 (2%)
Query: 30 PVIFSISAAPMPSDCEFSFFDPNDASCQEILFDPKTSVSELFAILRQWVPQVQQNIDIIG 89
PV+ + AP+P D F+FFDPND +CQEILFDP+T++ ELFAI+RQWVPQVQ ID+IG
Sbjct: 41 PVVHPSAPAPLPKDYAFTFFDPNDPACQEILFDPQTTIPELFAIVRQWVPQVQHKIDVIG 100
Query: 90 NEILKRGCNVNDRDGLTDMTLLHYTCKSGAHGIGDVETAVKFATQLIDLGADISLRSRWT 149
NEIL+RGC+VNDRDGLTDMTLLHY CK+GAHG+GD AV+ + QL+ LGAD++LRSRWT
Sbjct: 101 NEILRRGCHVNDRDGLTDMTLLHYACKAGAHGVGDPAAAVRLSQQLLALGADVTLRSRWT 160
Query: 150 NMNALHYAAYFDVPELIRVILKTSKPKDVDATCSDFNFGTALHIAAYNLCAGAVKCLLEQ 209
NMNALHYAAYFDVP+L+RV+LK ++P+ V++TCSDFN G+ALHIAA +LC GA KCLLE
Sbjct: 161 NMNALHYAAYFDVPDLVRVLLKGARPRVVNSTCSDFNHGSALHIAASSLCLGAAKCLLEH 220
Query: 210 GANPAFRNDKGQIPADVVPDPVDMPLEMADAAATAKEIKQMLLDAVPLSCNISKAMLPNY 269
GANPA RN KGQ+PA+VVPDP+DM L+ A+AA AKE++ +L +AVPLSC + K LPNY
Sbjct: 221 GANPALRNRKGQVPAEVVPDPMDMSLDKAEAALVAKELRTLLEEAVPLSCALPKVTLPNY 280
Query: 270 DHVTGKAMLTSLGLKLGDRVVIAGQKVGTLRFCGTTEFASGQWAGIELDEPEGKNNGSVG 329
D+V G ML++LGL+LGDRV++ GQK GTLRFCGTTEFASGQW G+ELDEPEGKN+GSVG
Sbjct: 281 DNVPGNLMLSALGLRLGDRVLLDGQKTGTLRFCGTTEFASGQWVGVELDEPEGKNDGSVG 340
Query: 330 KVQYFKCAPKYGIFAPLSKISKAKGRRKNITHTPSTKAAVPLIRSQKIDVAHVTSKVNTG 389
V+YF C PK G+FA +SKISKA + PS+ + P R+ ++D + VT K
Sbjct: 341 GVRYFICPPKQGLFASVSKISKA------VDAPPSSVTSTP--RTPRMDFSRVTGKGRRE 392
Query: 390 LMTSKKDSASESTLSLPPGEELKTVTEKDVALLG 423
KK +S S SL + K V + G
Sbjct: 393 HKGKKKTPSSPSLGSLQQRDGAKAEVGDQVLVAG 426
Score = 159 bits (402), Expect = 8e-39
Identities = 84/208 (40%), Positives = 120/208 (57%), Gaps = 21/208 (10%)
Query: 485 LRLGERVLVVGQRLGTIRFFGTTNFAPGYWYGIELEKPHGKNDGSVGGVQYFSCSPRYGI 544
LRLG+RVL+ GQ+ GT+RF GTT FA G W G+EL++P GKNDGSVGGV+YF C P+ G+
Sbjct: 294 LRLGDRVLLDGQKTGTLRFCGTTEFASGQWVGVELDEPEGKNDGSVGGVRYFICPPKQGL 353
Query: 545 FAPPSRVQRVTDSLDTLSEISSNKQNHSYPGFRRSFSTTSASSQKEINRRNAFSKSKAAL 604
FA S++ + D+ + S ++T + + + +R + +
Sbjct: 354 FASVSKISKAVDAPPS------------------SVTSTPRTPRMDFSRVTGKGRREHKG 395
Query: 605 RRSWSSTPTAGGIE--GSVKLHEGSQVLLTSSNEMGTVRYVGPTDFASGIWLGLELRSAK 662
++ S+P+ G ++ K G QVL+ + + G VR+ G TDFA G W G+EL
Sbjct: 396 KKKTPSSPSLGSLQQRDGAKAEVGDQVLV-AGQKQGIVRFYGKTDFAPGYWYGIELDQPT 454
Query: 663 GKNDGSVGDKRYFTCKPNHGVLVRPSRV 690
GK+DGSV RYFTC P HGV SR+
Sbjct: 455 GKHDGSVFGVRYFTCPPRHGVFAPASRI 482
Score = 121 bits (303), Expect = 3e-27
Identities = 68/176 (38%), Positives = 100/176 (56%), Gaps = 15/176 (8%)
Query: 424 SVSSCSSTSSLEHRQSYPKKQNAISSNKKTMSKSPSLSSRASAGLNSSATSTANNSRCEG 483
SV+S T ++ + K + KKT S SPSL S R
Sbjct: 370 SVTSTPRTPRMDFSRVTGKGRREHKGKKKTPS-SPSLGSL--------------QQRDGA 414
Query: 484 ELRLGERVLVVGQRLGTIRFFGTTNFAPGYWYGIELEKPHGKNDGSVGGVQYFSCSPRYG 543
+ +G++VLV GQ+ G +RF+G T+FAPGYWYGIEL++P GK+DGSV GV+YF+C PR+G
Sbjct: 415 KAEVGDQVLVAGQKQGIVRFYGKTDFAPGYWYGIELDQPTGKHDGSVFGVRYFTCPPRHG 474
Query: 544 IFAPPSRVQRVTDSLDTLSEISSNKQNHSYPGFRRSFSTTSASSQKEINRRNAFSK 599
+FAP SR+QR+ S D+ + K+ H + + T+ + K+I N+ S+
Sbjct: 475 VFAPASRIQRIGGSTDSPGDSVGAKKVHQVTMTQPKRTFTTVRTPKDIASENSISR 530
Score = 94.4 bits (233), Expect = 3e-19
Identities = 50/122 (40%), Positives = 77/122 (63%), Gaps = 10/122 (8%)
Query: 284 KLGDRVVIAGQKVGTLRFCGTTEFASGQWAGIELDEPEGKNNGSVGKVQYFKCAPKYGIF 343
++GD+V++AGQK G +RF G T+FA G W GIELD+P GK++GSV V+YF C P++G+F
Sbjct: 417 EVGDQVLVAGQKQGIVRFYGKTDFAPGYWYGIELDQPTGKHDGSVFGVRYFTCPPRHGVF 476
Query: 344 APLSKISKAKGRRKNITHTPSTKAAVPLIRSQKIDVAHVTSKVNT-GLMTSKKDSASEST 402
AP S+I + G ST + + ++K+ +T T + + KD ASE++
Sbjct: 477 APASRIQRIGG---------STDSPGDSVGAKKVHQVTMTQPKRTFTTVRTPKDIASENS 527
Query: 403 LS 404
+S
Sbjct: 528 IS 529
Score = 69.3 bits (168), Expect = 1e-11
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 623 LHEGSQVLLTSSNEMGTVRYVGPTDFASGIWLGLELRSAKGKNDGSVGDKRYFTCKPNHG 682
L G +VLL + GT+R+ G T+FASG W+G+EL +GKNDGSVG RYF C P G
Sbjct: 294 LRLGDRVLL-DGQKTGTLRFCGTTEFASGQWVGVELDEPEGKNDGSVGGVRYFICPPKQG 352
Query: 683 VLVRPSRVT 691
+ S+++
Sbjct: 353 LFASVSKIS 361
>gi|38044112 restin isoform b [Homo sapiens]
Length = 1392
Score = 173 bits (438), Expect = 6e-43
Identities = 117/337 (34%), Positives = 174/337 (51%), Gaps = 63/337 (18%)
Query: 284 KLGDRVVIAGQKVGTLRFCGTTEFASGQWAGIELDEPEGKNNGSVGKVQYFKCAPKYGIF 343
++G+RV + G K G ++F G T+FA GQWAGI LDEP GKN+GSV V+YF+C P GIF
Sbjct: 59 RVGERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPLKGIF 118
Query: 344 APLSKISK---AKGRRKNITHTPSTKAAVPLIRSQKIDVAHVTSKVNTGLMTSKKDSASE 400
SK+++ A+ + TP+++A PL S T+ S+S
Sbjct: 119 TRPSKLTRKVQAEDEANGLQTTPASRATSPLCTS-----------------TASMVSSSP 161
Query: 401 STLSLPPGEELKTVTEKDVALLGSVSSCSSTSSLEHRQSYPKKQNAISSNKKTMSKSPSL 460
ST S P + + ++ P IS+ KT S+S +
Sbjct: 162 STPSNIPQKPSQPAAKE-----------------------PSATPPISNLTKTASES--I 196
Query: 461 SSRASAGLNSSATSTANNSRCEGELRLGERVLVVGQRLGTIRFFGTTNFAPGYWYGIELE 520
S+ + AG + + E EL++G+RVLV G + G +RF G T+FA G W G+EL+
Sbjct: 197 SNLSEAG---------SIKKGERELKIGDRVLVGGTKAGVVRFLGETDFAKGEWCGVELD 247
Query: 521 KPHGKNDGSVGGVQYFSCSPRYGIFAPPSRVQRVTDSLDTLSEISSNKQNHSYPGFRRSF 580
+P GKNDG+V G +YF C P+YG+FAP +V ++ T ++ +N RR
Sbjct: 248 EPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTKIGFPSTTPAKAKAN-------AVRRVM 300
Query: 581 STTSASSQKEINRRNAFSKSKAALRRSWSSTPTAGGI 617
+TTSAS ++ + + S S A S SS P+ G+
Sbjct: 301 ATTSASLKRSPSASSLSSMSSVA--SSVSSRPSRTGL 335
Score = 143 bits (360), Expect = 6e-34
Identities = 88/241 (36%), Positives = 122/241 (50%), Gaps = 17/241 (7%)
Query: 470 SSATSTANNSRCEGELRLGERVLVVGQRLGTIRFFGTTNFAPGYWYGIELEKPHGKNDGS 529
SS S+ + R+GERV V G + G I+F G T FAPG W GI L++P GKNDGS
Sbjct: 43 SSTPSSETQEEFVDDFRVGERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGS 102
Query: 530 VGGVQYFSCSPRYGIFAPPSRVQRVTDSLDTLSEISSNKQNHSYPGFRRSFSTTSASS-- 587
V GV+YF C P GIF PS++ R + D + + + + + S ++ +SS
Sbjct: 103 VAGVRYFQCEPLKGIFTRPSKLTRKVQAEDEANGLQTTPASRATSPLCTSTASMVSSSPS 162
Query: 588 -------------QKEINRRNAFSKSKAALRRSWSSTPTAGGI-EGSVKLHEGSQVLLTS 633
KE + S S S+ AG I +G +L G +VL+
Sbjct: 163 TPSNIPQKPSQPAAKEPSATPPISNLTKTASESISNLSEAGSIKKGERELKIGDRVLV-G 221
Query: 634 SNEMGTVRYVGPTDFASGIWLGLELRSAKGKNDGSVGDKRYFTCKPNHGVLVRPSRVTYR 693
+ G VR++G TDFA G W G+EL GKNDG+V RYF C+P +G+ +VT
Sbjct: 222 GTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTKI 281
Query: 694 G 694
G
Sbjct: 282 G 282
Score = 101 bits (252), Expect = 2e-21
Identities = 58/169 (34%), Positives = 84/169 (49%), Gaps = 7/169 (4%)
Query: 254 AVPLSCNISKAMLPNYDHVT--GKAMLTSLGLKLGDRVVIAGQKVGTLRFCGTTEFASGQ 311
A P N++K + +++ G LK+GDRV++ G K G +RF G T+FA G+
Sbjct: 181 ATPPISNLTKTASESISNLSEAGSIKKGERELKIGDRVLVGGTKAGVVRFLGETDFAKGE 240
Query: 312 WAGIELDEPEGKNNGSVGKVQYFKCAPKYGIFAPLSKISKAKGRRKNITHTPSTKAAVPL 371
W G+ELDEP GKN+G+V +YF+C PKYG+FAP+ K++K T KA
Sbjct: 241 WCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTKI-----GFPSTTPAKAKANA 295
Query: 372 IRSQKIDVAHVTSKVNTGLMTSKKDSASESTLSLPPGEELKTVTEKDVA 420
+R + + + S S + S S P L T T A
Sbjct: 296 VRRVMATTSASLKRSPSASSLSSMSSVASSVSSRPSRTGLLTETSSRYA 344
>gi|4506751 restin isoform a [Homo sapiens]
Length = 1427
Score = 173 bits (438), Expect = 6e-43
Identities = 117/337 (34%), Positives = 174/337 (51%), Gaps = 63/337 (18%)
Query: 284 KLGDRVVIAGQKVGTLRFCGTTEFASGQWAGIELDEPEGKNNGSVGKVQYFKCAPKYGIF 343
++G+RV + G K G ++F G T+FA GQWAGI LDEP GKN+GSV V+YF+C P GIF
Sbjct: 59 RVGERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPLKGIF 118
Query: 344 APLSKISK---AKGRRKNITHTPSTKAAVPLIRSQKIDVAHVTSKVNTGLMTSKKDSASE 400
SK+++ A+ + TP+++A PL S T+ S+S
Sbjct: 119 TRPSKLTRKVQAEDEANGLQTTPASRATSPLCTS-----------------TASMVSSSP 161
Query: 401 STLSLPPGEELKTVTEKDVALLGSVSSCSSTSSLEHRQSYPKKQNAISSNKKTMSKSPSL 460
ST S P + + ++ P IS+ KT S+S +
Sbjct: 162 STPSNIPQKPSQPAAKE-----------------------PSATPPISNLTKTASES--I 196
Query: 461 SSRASAGLNSSATSTANNSRCEGELRLGERVLVVGQRLGTIRFFGTTNFAPGYWYGIELE 520
S+ + AG + + E EL++G+RVLV G + G +RF G T+FA G W G+EL+
Sbjct: 197 SNLSEAG---------SIKKGERELKIGDRVLVGGTKAGVVRFLGETDFAKGEWCGVELD 247
Query: 521 KPHGKNDGSVGGVQYFSCSPRYGIFAPPSRVQRVTDSLDTLSEISSNKQNHSYPGFRRSF 580
+P GKNDG+V G +YF C P+YG+FAP +V ++ T ++ +N RR
Sbjct: 248 EPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTKIGFPSTTPAKAKAN-------AVRRVM 300
Query: 581 STTSASSQKEINRRNAFSKSKAALRRSWSSTPTAGGI 617
+TTSAS ++ + + S S A S SS P+ G+
Sbjct: 301 ATTSASLKRSPSASSLSSMSSVA--SSVSSRPSRTGL 335
Score = 143 bits (360), Expect = 6e-34
Identities = 88/241 (36%), Positives = 122/241 (50%), Gaps = 17/241 (7%)
Query: 470 SSATSTANNSRCEGELRLGERVLVVGQRLGTIRFFGTTNFAPGYWYGIELEKPHGKNDGS 529
SS S+ + R+GERV V G + G I+F G T FAPG W GI L++P GKNDGS
Sbjct: 43 SSTPSSETQEEFVDDFRVGERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGS 102
Query: 530 VGGVQYFSCSPRYGIFAPPSRVQRVTDSLDTLSEISSNKQNHSYPGFRRSFSTTSASS-- 587
V GV+YF C P GIF PS++ R + D + + + + + S ++ +SS
Sbjct: 103 VAGVRYFQCEPLKGIFTRPSKLTRKVQAEDEANGLQTTPASRATSPLCTSTASMVSSSPS 162
Query: 588 -------------QKEINRRNAFSKSKAALRRSWSSTPTAGGI-EGSVKLHEGSQVLLTS 633
KE + S S S+ AG I +G +L G +VL+
Sbjct: 163 TPSNIPQKPSQPAAKEPSATPPISNLTKTASESISNLSEAGSIKKGERELKIGDRVLV-G 221
Query: 634 SNEMGTVRYVGPTDFASGIWLGLELRSAKGKNDGSVGDKRYFTCKPNHGVLVRPSRVTYR 693
+ G VR++G TDFA G W G+EL GKNDG+V RYF C+P +G+ +VT
Sbjct: 222 GTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTKI 281
Query: 694 G 694
G
Sbjct: 282 G 282
Score = 101 bits (252), Expect = 2e-21
Identities = 58/169 (34%), Positives = 84/169 (49%), Gaps = 7/169 (4%)
Query: 254 AVPLSCNISKAMLPNYDHVT--GKAMLTSLGLKLGDRVVIAGQKVGTLRFCGTTEFASGQ 311
A P N++K + +++ G LK+GDRV++ G K G +RF G T+FA G+
Sbjct: 181 ATPPISNLTKTASESISNLSEAGSIKKGERELKIGDRVLVGGTKAGVVRFLGETDFAKGE 240
Query: 312 WAGIELDEPEGKNNGSVGKVQYFKCAPKYGIFAPLSKISKAKGRRKNITHTPSTKAAVPL 371
W G+ELDEP GKN+G+V +YF+C PKYG+FAP+ K++K T KA
Sbjct: 241 WCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTKI-----GFPSTTPAKAKANA 295
Query: 372 IRSQKIDVAHVTSKVNTGLMTSKKDSASESTLSLPPGEELKTVTEKDVA 420
+R + + + S S + S S P L T T A
Sbjct: 296 VRRVMATTSASLKRSPSASSLSSMSSVASSVSSRPSRTGLLTETSSRYA 344
>gi|116008447 CAP-GLY domain containing linker protein 2 isoform 1
[Homo sapiens]
Length = 1046
Score = 149 bits (375), Expect = 1e-35
Identities = 105/344 (30%), Positives = 163/344 (47%), Gaps = 68/344 (19%)
Query: 285 LGDRVVIAGQKVGTLRFCGTTEFASGQWAGIELDEPEGKNNGSVGKVQYFKCAPKYGIFA 344
+G+RV + G K G +++ G T+FA GQWAG+ LD+P GKN+G+VG V+YF+C GIF
Sbjct: 81 VGERVWVNGVKPGVVQYLGETQFAPGQWAGVVLDDPVGKNDGAVGGVRYFECPALQGIFT 140
Query: 345 PLSKISKAKGRRKNITHTPSTKAAVPLIRSQKIDVAHVTSKVNTGLMTSKKDSASESTLS 404
SK+ T P+ + + G +S + LS
Sbjct: 141 RPSKL----------TRQPTAEGS--------------------GSDAHSVESLTAQNLS 170
Query: 405 LPPGEELKTVTEKDVALLGSVSSCSSTSSLEHRQSYPKKQNAISSNKKTMSKSPSLSSRA 464
L G +T + + P +++ ++S+ KT ++S
Sbjct: 171 LHSGTATPPLTSRVI---------------------PLRESVLNSSVKTGNES------- 202
Query: 465 SAGLNSSATSTANNSRCEGELRLGERVLVVGQRLGTIRFFGTTNFAPGYWYGIELEKPHG 524
S+ + + + R E +LRLG+RVLV G + G +R+ G T+FA G W G+EL++P G
Sbjct: 203 ----GSNLSDSGSVKRGEKDLRLGDRVLVGGTKTGVVRYVGETDFAKGEWCGVELDEPLG 258
Query: 525 KNDGSVGGVQYFSCSPRYGIFAPPSRVQRVTDSLDTLSEISSNKQNHSYPG---FRRSFS 581
KNDG+V G +YF C P++G+FAP +V R+ + S + K G S S
Sbjct: 259 KNDGAVAGTRYFQCPPKFGLFAPIHKVIRI--GFPSTSPAKAKKTKRMAMGVSALTHSPS 316
Query: 582 TTSASSQKEINRRNAFSKSKAALRRSWSSTPTAGGIEGSVKLHE 625
++S SS + S++ L SS A I G+ L E
Sbjct: 317 SSSISSVSSVASSVGGRPSRSGLLTETSSR-YARKISGTTALQE 359
Score = 138 bits (348), Expect = 2e-32
Identities = 95/283 (33%), Positives = 134/283 (47%), Gaps = 18/283 (6%)
Query: 406 PPGEELKTVTEKDVALLGSVSSCSSTSSLEHRQSYPKKQNAISSNKKTMSKSPSLSSRAS 465
PPG K + GS SS ++ ++ S KQ++ S+ + +P +
Sbjct: 9 PPGRGGKHSSPMGRTSTGSASSSAAVAASSKEGSPLHKQSSGPSSSPAAAAAPEKPGPKA 68
Query: 466 AGLNSSATSTANNSRCEGELRLGERVLVVGQRLGTIRFFGTTNFAPGYWYGIELEKPHGK 525
A + G+ +GERV V G + G +++ G T FAPG W G+ L+ P GK
Sbjct: 69 AEVGDDFL---------GDFVVGERVWVNGVKPGVVQYLGETQFAPGQWAGVVLDDPVGK 119
Query: 526 NDGSVGGVQYFSCSPRYGIFAPPSRVQRVT----DSLDTLSEISSNKQNHSYPGFRRSFS 581
NDG+VGGV+YF C GIF PS++ R D S S QN S +
Sbjct: 120 NDGAVGGVRYFECPALQGIFTRPSKLTRQPTAEGSGSDAHSVESLTAQNLS---LHSGTA 176
Query: 582 TTSASSQKEINRRNAFSKSKAALRRSWSSTPTAGGIE-GSVKLHEGSQVLLTSSNEMGTV 640
T +S+ R + + S S S+ +G ++ G L G +VL+ + G V
Sbjct: 177 TPPLTSRVIPLRESVLNSSVKTGNESGSNLSDSGSVKRGEKDLRLGDRVLV-GGTKTGVV 235
Query: 641 RYVGPTDFASGIWLGLELRSAKGKNDGSVGDKRYFTCKPNHGV 683
RYVG TDFA G W G+EL GKNDG+V RYF C P G+
Sbjct: 236 RYVGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCPPKFGL 278
Score = 96.3 bits (238), Expect = 9e-20
Identities = 44/101 (43%), Positives = 66/101 (65%), Gaps = 16/101 (15%)
Query: 283 LKLGDRVVIAGQKVGTLRFCGTTEFASGQWAGIELDEPEGKNNGSVGKVQYFKCAPKYGI 342
L+LGDRV++ G K G +R+ G T+FA G+W G+ELDEP GKN+G+V +YF+C PK+G+
Sbjct: 219 LRLGDRVLVGGTKTGVVRYVGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCPPKFGL 278
Query: 343 FAPLSKI--------SKAKGRRKN--------ITHTPSTKA 367
FAP+ K+ S AK ++ +TH+PS+ +
Sbjct: 279 FAPIHKVIRIGFPSTSPAKAKKTKRMAMGVSALTHSPSSSS 319
Score = 60.8 bits (146), Expect = 4e-09
Identities = 27/54 (50%), Positives = 34/54 (62%)
Query: 638 GTVRYVGPTDFASGIWLGLELRSAKGKNDGSVGDKRYFTCKPNHGVLVRPSRVT 691
G V+Y+G T FA G W G+ L GKNDG+VG RYF C G+ RPS++T
Sbjct: 93 GVVQYLGETQFAPGQWAGVVLDDPVGKNDGAVGGVRYFECPALQGIFTRPSKLT 146
>gi|14702162 CAP-GLY domain containing linker protein 2 isoform 2
[Homo sapiens]
Length = 1011
Score = 149 bits (375), Expect = 1e-35
Identities = 105/344 (30%), Positives = 163/344 (47%), Gaps = 68/344 (19%)
Query: 285 LGDRVVIAGQKVGTLRFCGTTEFASGQWAGIELDEPEGKNNGSVGKVQYFKCAPKYGIFA 344
+G+RV + G K G +++ G T+FA GQWAG+ LD+P GKN+G+VG V+YF+C GIF
Sbjct: 81 VGERVWVNGVKPGVVQYLGETQFAPGQWAGVVLDDPVGKNDGAVGGVRYFECPALQGIFT 140
Query: 345 PLSKISKAKGRRKNITHTPSTKAAVPLIRSQKIDVAHVTSKVNTGLMTSKKDSASESTLS 404
SK+ T P+ + + G +S + LS
Sbjct: 141 RPSKL----------TRQPTAEGS--------------------GSDAHSVESLTAQNLS 170
Query: 405 LPPGEELKTVTEKDVALLGSVSSCSSTSSLEHRQSYPKKQNAISSNKKTMSKSPSLSSRA 464
L G +T + + P +++ ++S+ KT ++S
Sbjct: 171 LHSGTATPPLTSRVI---------------------PLRESVLNSSVKTGNES------- 202
Query: 465 SAGLNSSATSTANNSRCEGELRLGERVLVVGQRLGTIRFFGTTNFAPGYWYGIELEKPHG 524
S+ + + + R E +LRLG+RVLV G + G +R+ G T+FA G W G+EL++P G
Sbjct: 203 ----GSNLSDSGSVKRGEKDLRLGDRVLVGGTKTGVVRYVGETDFAKGEWCGVELDEPLG 258
Query: 525 KNDGSVGGVQYFSCSPRYGIFAPPSRVQRVTDSLDTLSEISSNKQNHSYPG---FRRSFS 581
KNDG+V G +YF C P++G+FAP +V R+ + S + K G S S
Sbjct: 259 KNDGAVAGTRYFQCPPKFGLFAPIHKVIRI--GFPSTSPAKAKKTKRMAMGVSALTHSPS 316
Query: 582 TTSASSQKEINRRNAFSKSKAALRRSWSSTPTAGGIEGSVKLHE 625
++S SS + S++ L SS A I G+ L E
Sbjct: 317 SSSISSVSSVASSVGGRPSRSGLLTETSSR-YARKISGTTALQE 359
Score = 138 bits (348), Expect = 2e-32
Identities = 95/283 (33%), Positives = 134/283 (47%), Gaps = 18/283 (6%)
Query: 406 PPGEELKTVTEKDVALLGSVSSCSSTSSLEHRQSYPKKQNAISSNKKTMSKSPSLSSRAS 465
PPG K + GS SS ++ ++ S KQ++ S+ + +P +
Sbjct: 9 PPGRGGKHSSPMGRTSTGSASSSAAVAASSKEGSPLHKQSSGPSSSPAAAAAPEKPGPKA 68
Query: 466 AGLNSSATSTANNSRCEGELRLGERVLVVGQRLGTIRFFGTTNFAPGYWYGIELEKPHGK 525
A + G+ +GERV V G + G +++ G T FAPG W G+ L+ P GK
Sbjct: 69 AEVGDDFL---------GDFVVGERVWVNGVKPGVVQYLGETQFAPGQWAGVVLDDPVGK 119
Query: 526 NDGSVGGVQYFSCSPRYGIFAPPSRVQRVT----DSLDTLSEISSNKQNHSYPGFRRSFS 581
NDG+VGGV+YF C GIF PS++ R D S S QN S +
Sbjct: 120 NDGAVGGVRYFECPALQGIFTRPSKLTRQPTAEGSGSDAHSVESLTAQNLS---LHSGTA 176
Query: 582 TTSASSQKEINRRNAFSKSKAALRRSWSSTPTAGGIE-GSVKLHEGSQVLLTSSNEMGTV 640
T +S+ R + + S S S+ +G ++ G L G +VL+ + G V
Sbjct: 177 TPPLTSRVIPLRESVLNSSVKTGNESGSNLSDSGSVKRGEKDLRLGDRVLV-GGTKTGVV 235
Query: 641 RYVGPTDFASGIWLGLELRSAKGKNDGSVGDKRYFTCKPNHGV 683
RYVG TDFA G W G+EL GKNDG+V RYF C P G+
Sbjct: 236 RYVGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCPPKFGL 278
Score = 96.3 bits (238), Expect = 9e-20
Identities = 44/101 (43%), Positives = 66/101 (65%), Gaps = 16/101 (15%)
Query: 283 LKLGDRVVIAGQKVGTLRFCGTTEFASGQWAGIELDEPEGKNNGSVGKVQYFKCAPKYGI 342
L+LGDRV++ G K G +R+ G T+FA G+W G+ELDEP GKN+G+V +YF+C PK+G+
Sbjct: 219 LRLGDRVLVGGTKTGVVRYVGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCPPKFGL 278
Query: 343 FAPLSKI--------SKAKGRRKN--------ITHTPSTKA 367
FAP+ K+ S AK ++ +TH+PS+ +
Sbjct: 279 FAPIHKVIRIGFPSTSPAKAKKTKRMAMGVSALTHSPSSSS 319
Score = 60.8 bits (146), Expect = 4e-09
Identities = 27/54 (50%), Positives = 34/54 (62%)
Query: 638 GTVRYVGPTDFASGIWLGLELRSAKGKNDGSVGDKRYFTCKPNHGVLVRPSRVT 691
G V+Y+G T FA G W G+ L GKNDG+VG RYF C G+ RPS++T
Sbjct: 93 GVVQYLGETQFAPGQWAGVVLDDPVGKNDGAVGGVRYFECPALQGIFTRPSKLT 146
>gi|171184451 centrosome-associated protein 350 [Homo sapiens]
Length = 3117
Score = 94.0 bits (232), Expect = 4e-19
Identities = 60/229 (26%), Positives = 113/229 (49%), Gaps = 26/229 (11%)
Query: 397 SASESTLSLPPGEEL-KTVTEKDVALLGSVSSCSSTSSLEHRQSYPKKQNAISSNKKTMS 455
S++ S EE+ + ++EK +++ +V S + K+ + +++ ++
Sbjct: 2421 SSTSGATSFGSNEEISECLSEKSLSIHSNVHSDRLLELKSPTELMKSKERSDVEHEQQVT 2480
Query: 456 KSPSLSSRASAGLNSSATSTANNSRCEGELRLGERVLVVGQRLGTIRFFGTTNFAPGYWY 515
+SPSL+S TA+ + +G+RVL+ + G +RF G T+FA G+W
Sbjct: 2481 ESPSLAS----------VPTADELF---DFHIGDRVLIGNVQPGILRFKGETSFAKGFWA 2527
Query: 516 GIELEKPHGKNDGSVGGVQYFSCSPRYGIFAPPSRVQRVTDSLDTLSEISSNKQNHS--- 572
G+EL+KP G N+G+ G+ YF C ++GIFAPP ++ + ++ D +I+ ++ +S
Sbjct: 2528 GVELDKPEGNNNGTYDGIAYFECKEKHGIFAPPQKISHIPENFDDYVDINEDEDCYSDER 2587
Query: 573 YPGFRRSFSTTSASSQKEINRRNAFSKSKAALRRSWSSTPTAGGIEGSV 621
Y + + + T +E + F + S P+ IE SV
Sbjct: 2588 YQCYNQEQNDTEGPKDREKDVSEYFYE---------KSLPSVNDIEASV 2627
Score = 83.6 bits (205), Expect = 6e-16
Identities = 38/66 (57%), Positives = 47/66 (71%)
Query: 285 LGDRVVIAGQKVGTLRFCGTTEFASGQWAGIELDEPEGKNNGSVGKVQYFKCAPKYGIFA 344
+GDRV+I + G LRF G T FA G WAG+ELD+PEG NNG+ + YF+C K+GIFA
Sbjct: 2499 IGDRVLIGNVQPGILRFKGETSFAKGFWAGVELDKPEGNNNGTYDGIAYFECKEKHGIFA 2558
Query: 345 PLSKIS 350
P KIS
Sbjct: 2559 PPQKIS 2564
Score = 62.4 bits (150), Expect = 1e-09
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Query: 607 SWSSTPTAGGIEGSVKLHEGSQVLLTSSNEMGTVRYVGPTDFASGIWLGLELRSAKGKND 666
S +S PTA + H G +VL+ + + G +R+ G T FA G W G+EL +G N+
Sbjct: 2484 SLASVPTADEL---FDFHIGDRVLI-GNVQPGILRFKGETSFAKGFWAGVELDKPEGNNN 2539
Query: 667 GSVGDKRYFTCKPNHGVLVRPSRVTYRGINGSKLVDEN 704
G+ YF CK HG+ P ++++ N VD N
Sbjct: 2540 GTYDGIAYFECKEKHGIFAPPQKISHIPENFDDYVDIN 2577
>gi|46852172 kinesin family member 13B [Homo sapiens]
Length = 1826
Score = 85.1 bits (209), Expect = 2e-16
Identities = 54/150 (36%), Positives = 76/150 (50%), Gaps = 10/150 (6%)
Query: 466 AGLNSSATSTANNSRCEGELRLGERVLVVGQRLGTIRFFGTTNFAPGYWYGIELEKPHGK 525
AG + A+ + LR GE V V + G +R+ G +F G W G+EL+ P GK
Sbjct: 1682 AGGQALASDSEEADEVPEWLREGEFVTVGAHKTGVVRYVGPADFQEGTWVGVELDLPSGK 1741
Query: 526 NDGSVGGVQYFSCSPRYGIFAPPSRVQRVTDSLDTLSEISSNKQNHSYPGFRRSFSTTSA 585
NDGS+GG QYF C+P YG+ PSRV+R T + S P RRS +T S
Sbjct: 1742 NDGSIGGKQYFRCNPGYGLLVRPSRVRRATGPV----RRRSTGLRLGAPEARRS-ATLSG 1796
Query: 586 SSQKEINRRNAFSKSKAA-----LRRSWSS 610
S+ + A +K+ + R+SW+S
Sbjct: 1797 SATNLASLTAALAKADRSHKNPENRKSWAS 1826
Score = 82.0 bits (201), Expect = 2e-15
Identities = 38/68 (55%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 623 LHEGSQVLLTSSNEMGTVRYVGPTDFASGIWLGLELRSAKGKNDGSVGDKRYFTCKPNHG 682
L EG V + +++ G VRYVGP DF G W+G+EL GKNDGS+G K+YF C P +G
Sbjct: 1701 LREGEFVTV-GAHKTGVVRYVGPADFQEGTWVGVELDLPSGKNDGSIGGKQYFRCNPGYG 1759
Query: 683 VLVRPSRV 690
+LVRPSRV
Sbjct: 1760 LLVRPSRV 1767
Score = 75.5 bits (184), Expect = 2e-13
Identities = 31/72 (43%), Positives = 45/72 (62%)
Query: 283 LKLGDRVVIAGQKVGTLRFCGTTEFASGQWAGIELDEPEGKNNGSVGKVQYFKCAPKYGI 342
L+ G+ V + K G +R+ G +F G W G+ELD P GKN+GS+G QYF+C P YG+
Sbjct: 1701 LREGEFVTVGAHKTGVVRYVGPADFQEGTWVGVELDLPSGKNDGSIGGKQYFRCNPGYGL 1760
Query: 343 FAPLSKISKAKG 354
S++ +A G
Sbjct: 1761 LVRPSRVRRATG 1772
>gi|13259510 dynactin 1 isoform 1 [Homo sapiens]
Length = 1278
Score = 83.2 bits (204), Expect = 8e-16
Identities = 51/160 (31%), Positives = 80/160 (50%), Gaps = 7/160 (4%)
Query: 462 SRASAGLNSSATSTANNSRCEGELRLGERVLVVGQ-RLGTIRFFGTTNFAPGYWYGIELE 520
SR +G SA ++A LR+G RV V+G+ GT+ + G T FA G W G+ L+
Sbjct: 10 SRTPSGSRMSAEASAR------PLRVGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILD 63
Query: 521 KPHGKNDGSVGGVQYFSCSPRYGIFAPPSRVQRVTDSLDTLSEISSNKQNHSYPGFRRSF 580
+ GKNDG+V G +YF+C +GIF S++Q D DT S + + +
Sbjct: 64 EAKGKNDGTVQGRKYFTCDEGHGIFVRQSQIQVFEDGADTTSPETPDSSASKVLKREGTD 123
Query: 581 STTSASSQKEINRRNAFSKSKAALRRSWSSTPTAGGIEGS 620
+T S + + + A + K RR + P + G+ G+
Sbjct: 124 TTAKTSKLRGLKPKKAPTARKTTTRRPKPTRPASTGVAGA 163
Score = 75.5 bits (184), Expect = 2e-13
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 605 RRSWSSTPTAGGIEGSVK---LHEGSQVLLTSSNEMGTVRYVGPTDFASGIWLGLELRSA 661
R +S TP+ + L GS+V + GTV YVG T FA+G W+G+ L A
Sbjct: 6 RHVYSRTPSGSRMSAEASARPLRVGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILDEA 65
Query: 662 KGKNDGSVGDKRYFTCKPNHGVLVRPSRV 690
KGKNDG+V ++YFTC HG+ VR S++
Sbjct: 66 KGKNDGTVQGRKYFTCDEGHGIFVRQSQI 94
Score = 70.1 bits (170), Expect = 7e-12
Identities = 52/162 (32%), Positives = 80/162 (49%), Gaps = 5/162 (3%)
Query: 283 LKLGDRVVIAGQ-KVGTLRFCGTTEFASGQWAGIELDEPEGKNNGSVGKVQYFKCAPKYG 341
L++G RV + G+ GT+ + G T FA+G+W G+ LDE +GKN+G+V +YF C +G
Sbjct: 27 LRVGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCDEGHG 86
Query: 342 IFAPLSKISKAK-GRRKNITHTPSTKAAVPLIRSQKIDVAHVTSKVNTGLMTSKKDSASE 400
IF S+I + G TP + A+ +++ + D TSK+ GL K +A +
Sbjct: 87 IFVRQSQIQVFEDGADTTSPETPDSSAS-KVLKREGTDTTAKTSKLR-GLKPKKAPTARK 144
Query: 401 STLSLP-PGEELKTVTEKDVALLGSVSSCSSTSSLEHRQSYP 441
+T P P T + LG S S+ S P
Sbjct: 145 TTTRRPKPTRPASTGVAGASSSLGPSGSASAGELSSSEPSTP 186
>gi|205277392 dynactin 1 isoform 3 [Homo sapiens]
Length = 1253
Score = 77.8 bits (190), Expect = 3e-14
Identities = 52/160 (32%), Positives = 81/160 (50%), Gaps = 9/160 (5%)
Query: 462 SRASAGLNSSATSTANNSRCEGELRLGERVLVVGQ-RLGTIRFFGTTNFAPGYWYGIELE 520
SR +G SA ++A LR+G RV V+G+ GT+ + G T FA G W G+ L+
Sbjct: 10 SRTPSGSRMSAEASAR------PLRVGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILD 63
Query: 521 KPHGKNDGSVGGVQYFSCSPRYGIFAPPSRVQRVTDSLDTLSEISSNKQNHSYPGFRRSF 580
+ GKNDG+V G +YF+C +GIF S++Q D DT S + + +R
Sbjct: 64 EAKGKNDGTVQGRKYFTCDEGHGIFVRQSQIQVFEDGADTTS--PETPDSSASKVLKREG 121
Query: 581 STTSASSQKEINRRNAFSKSKAALRRSWSSTPTAGGIEGS 620
+ T+A + K R + + A+ S + +AG + S
Sbjct: 122 TDTTAKTSKLPTRPASTGVAGASSSLGPSGSASAGELSSS 161
Score = 75.5 bits (184), Expect = 2e-13
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 605 RRSWSSTPTAGGIEGSVK---LHEGSQVLLTSSNEMGTVRYVGPTDFASGIWLGLELRSA 661
R +S TP+ + L GS+V + GTV YVG T FA+G W+G+ L A
Sbjct: 6 RHVYSRTPSGSRMSAEASARPLRVGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILDEA 65
Query: 662 KGKNDGSVGDKRYFTCKPNHGVLVRPSRV 690
KGKNDG+V ++YFTC HG+ VR S++
Sbjct: 66 KGKNDGTVQGRKYFTCDEGHGIFVRQSQI 94
Score = 66.2 bits (160), Expect = 1e-10
Identities = 42/121 (34%), Positives = 67/121 (55%), Gaps = 3/121 (2%)
Query: 283 LKLGDRVVIAGQ-KVGTLRFCGTTEFASGQWAGIELDEPEGKNNGSVGKVQYFKCAPKYG 341
L++G RV + G+ GT+ + G T FA+G+W G+ LDE +GKN+G+V +YF C +G
Sbjct: 27 LRVGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCDEGHG 86
Query: 342 IFAPLSKISKAK-GRRKNITHTPSTKAAVPLIRSQKIDVAHVTSKVNTGLMTSKKDSASE 400
IF S+I + G TP + A+ +++ + D TSK+ T ++ AS
Sbjct: 87 IFVRQSQIQVFEDGADTTSPETPDSSAS-KVLKREGTDTTAKTSKLPTRPASTGVAGASS 145
Query: 401 S 401
S
Sbjct: 146 S 146
>gi|50428925 cytoskeleton associated protein 1 [Homo sapiens]
Length = 244
Score = 76.6 bits (187), Expect = 7e-14
Identities = 41/116 (35%), Positives = 63/116 (54%), Gaps = 10/116 (8%)
Query: 438 QSYPKKQNAISSNKKTMSKSPSLSSRASAGLNSSATSTANNSRCEGELRLGERVLVVGQ- 496
+S+ K+ N++ ++ + +++ A + A+S SRCE V GQ
Sbjct: 122 RSFLKRSKLGRYNEEERAQQEAEAAQRLAEEKAQASSIPVGSRCE--------VRAAGQS 173
Query: 497 -RLGTIRFFGTTNFAPGYWYGIELEKPHGKNDGSVGGVQYFSCSPRYGIFAPPSRV 551
R GT+ + G T+F PGYW G+ ++P GKNDGSV G +YF C +YG F P+ V
Sbjct: 174 PRRGTVMYVGLTDFKPGYWIGVRYDEPLGKNDGSVNGKRYFECQAKYGAFVKPAVV 229
Score = 65.5 bits (158), Expect = 2e-10
Identities = 30/58 (51%), Positives = 36/58 (62%)
Query: 634 SNEMGTVRYVGPTDFASGIWLGLELRSAKGKNDGSVGDKRYFTCKPNHGVLVRPSRVT 691
S GTV YVG TDF G W+G+ GKNDGSV KRYF C+ +G V+P+ VT
Sbjct: 173 SPRRGTVMYVGLTDFKPGYWIGVRYDEPLGKNDGSVNGKRYFECQAKYGAFVKPAVVT 230
Score = 60.8 bits (146), Expect = 4e-09
Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 275 KAMLTSLGLKLGDRVVIAGQ--KVGTLRFCGTTEFASGQWAGIELDEPEGKNNGSVGKVQ 332
KA +S+ + V AGQ + GT+ + G T+F G W G+ DEP GKN+GSV +
Sbjct: 153 KAQASSIPVGSRCEVRAAGQSPRRGTVMYVGLTDFKPGYWIGVRYDEPLGKNDGSVNGKR 212
Query: 333 YFKCAPKYGIF 343
YF+C KYG F
Sbjct: 213 YFECQAKYGAF 223
>gi|53832024 nuclear factor of kappa light polypeptide gene enhancer
in B-cells inhibitor, zeta isoform b [Homo sapiens]
Length = 618
Score = 50.8 bits (120), Expect = 4e-06
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
Query: 135 LIDLGADISLRSRWTNMNALHYAAYFDVPELIRVILKTSKPKDVDATCSDFNFGTALHIA 194
LI +GA + + R + ALH AA ELIR+ L+ +N TALH+A
Sbjct: 498 LIQMGAAVEAKDRKSGRTALHLAAEEANLELIRLFLELPSCLSF-VNAKAYNGNTALHVA 556
Query: 195 A---YNLCA-GAVKCLLEQGANPAFRNDKGQIPADVVPD 229
A Y L AV+ L+ +GA+P+ RN + + P +VPD
Sbjct: 557 ASLQYRLTQLDAVRLLMRKGADPSTRNLENEQPVHLVPD 595
>gi|13899229 nuclear factor of kappa light polypeptide gene enhancer
in B-cells inhibitor, zeta isoform a [Homo sapiens]
Length = 718
Score = 50.8 bits (120), Expect = 4e-06
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
Query: 135 LIDLGADISLRSRWTNMNALHYAAYFDVPELIRVILKTSKPKDVDATCSDFNFGTALHIA 194
LI +GA + + R + ALH AA ELIR+ L+ +N TALH+A
Sbjct: 598 LIQMGAAVEAKDRKSGRTALHLAAEEANLELIRLFLELPSCLSF-VNAKAYNGNTALHVA 656
Query: 195 A---YNLCA-GAVKCLLEQGANPAFRNDKGQIPADVVPD 229
A Y L AV+ L+ +GA+P+ RN + + P +VPD
Sbjct: 657 ASLQYRLTQLDAVRLLMRKGADPSTRNLENEQPVHLVPD 695
>gi|118442828 beta-tubulin cofactor E [Homo sapiens]
Length = 527
Score = 49.7 bits (117), Expect = 9e-06
Identities = 31/77 (40%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 487 LGERVLVVGQRLGTIRFFGTTNFAPGYWYGIELEKP-HGKNDGSVGGVQYFSC-SPRYGI 544
+G RV V G+ T+RF G G W G+E + P GK+DGS G YF C P G
Sbjct: 10 IGRRVEVNGEH-ATVRFAGVVPPVAGPWLGVEWDNPERGKHDGSHEGTVYFKCRHPTGGS 68
Query: 545 FAPPSRVQRVTDSLDTL 561
F P++V TD L +
Sbjct: 69 FIRPNKVNFGTDFLTAI 85
Score = 45.4 bits (106), Expect = 2e-04
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 285 LGDRVVIAGQKVGTLRFCGTTEFASGQWAGIELDEPE-GKNNGSVGKVQYFKCA-PKYGI 342
+G RV + G+ T+RF G +G W G+E D PE GK++GS YFKC P G
Sbjct: 10 IGRRVEVNGEHA-TVRFAGVVPPVAGPWLGVEWDNPERGKHDGSHEGTVYFKCRHPTGGS 68
Query: 343 FAPLSKIS 350
F +K++
Sbjct: 69 FIRPNKVN 76
Score = 43.1 bits (100), Expect = 9e-04
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 634 SNEMGTVRYVGPTDFASGIWLGLEL-RSAKGKNDGSVGDKRYFTCK-PNHGVLVRPSRVT 691
+ E TVR+ G +G WLG+E +GK+DGS YF C+ P G +RP++V
Sbjct: 17 NGEHATVRFAGVVPPVAGPWLGVEWDNPERGKHDGSHEGTVYFKCRHPTGGSFIRPNKVN 76
Query: 692 Y 692
+
Sbjct: 77 F 77
>gi|4507375 beta-tubulin cofactor E [Homo sapiens]
Length = 527
Score = 49.7 bits (117), Expect = 9e-06
Identities = 31/77 (40%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 487 LGERVLVVGQRLGTIRFFGTTNFAPGYWYGIELEKP-HGKNDGSVGGVQYFSC-SPRYGI 544
+G RV V G+ T+RF G G W G+E + P GK+DGS G YF C P G
Sbjct: 10 IGRRVEVNGEH-ATVRFAGVVPPVAGPWLGVEWDNPERGKHDGSHEGTVYFKCRHPTGGS 68
Query: 545 FAPPSRVQRVTDSLDTL 561
F P++V TD L +
Sbjct: 69 FIRPNKVNFGTDFLTAI 85
Score = 45.4 bits (106), Expect = 2e-04
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 285 LGDRVVIAGQKVGTLRFCGTTEFASGQWAGIELDEPE-GKNNGSVGKVQYFKCA-PKYGI 342
+G RV + G+ T+RF G +G W G+E D PE GK++GS YFKC P G
Sbjct: 10 IGRRVEVNGEHA-TVRFAGVVPPVAGPWLGVEWDNPERGKHDGSHEGTVYFKCRHPTGGS 68
Query: 343 FAPLSKIS 350
F +K++
Sbjct: 69 FIRPNKVN 76
Score = 43.1 bits (100), Expect = 9e-04
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 634 SNEMGTVRYVGPTDFASGIWLGLEL-RSAKGKNDGSVGDKRYFTCK-PNHGVLVRPSRVT 691
+ E TVR+ G +G WLG+E +GK+DGS YF C+ P G +RP++V
Sbjct: 17 NGEHATVRFAGVVPPVAGPWLGVEWDNPERGKHDGSHEGTVYFKCRHPTGGSFIRPNKVN 76
Query: 692 Y 692
+
Sbjct: 77 F 77
>gi|116875852 HECT domain and ankyrin repeat containing, E3
ubiquitin protein ligase 1 [Homo sapiens]
Length = 909
Score = 47.8 bits (112), Expect = 4e-05
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 17/171 (9%)
Query: 55 SCQEILFDPKTSVSELFAILRQWVPQVQQNIDIIGNEIL--KRGCNVNDRDGLTDMTLLH 112
S E+L + K V+ F +++ + + N + +L K+G N N +D ++ T LH
Sbjct: 45 SVSELLSNSKFDVNYAFGRVKRSLLHIAANCGSVECLVLLLKKGANPNYQD-ISGCTPLH 103
Query: 113 YTCKSGAHGIGDVETAVKFATQLIDLGADISLRSRWTNMNALHYAAYFDVPELIRVILKT 172
++G K ++L++ AD+++ + + A+H+ A EL+ +++
Sbjct: 104 LAARNGQK---------KCMSKLLEYSADVNICNN-EGLTAIHWLAVNGRTELLHDLVQH 153
Query: 173 SKPKDVDATCSDFNFGTALHIAAYNLCAGAVKCLLEQGANPAFRNDKGQIP 223
DV+ TALH+A N V+CLL+ GA+ N G P
Sbjct: 154 VSDVDVEDAMGQ----TALHVACQNGHKTTVQCLLDSGADINRPNVSGATP 200
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 47.4 bits (111), Expect = 5e-05
Identities = 61/235 (25%), Positives = 92/235 (39%), Gaps = 43/235 (18%)
Query: 101 DRDGLTDMTLLHYTCKSGAHGIGDVETAVKFATQLIDLGADISLRSRWTNMNALHYAAYF 160
D G T + L C+ G G+ + + L++ + T+ LH AA
Sbjct: 145 DNSGKTPLDL---ACEFGRVGVVQLLLSSNMCAALLEPRPGDATDPNGTS--PLHLAAKN 199
Query: 161 DVPELIRVILKTSKPKDVDATCSDFNFGTALHIAAYNLCAGAVKCLLEQGANPAFRNDKG 220
++IR++L+ D++ GTALH AA V+ LL+ G N RN
Sbjct: 200 GHIDIIRLLLQAGI--DINRQTKS---GTALHEAALCGKTEVVRLLLDSGINAHVRNTYS 254
Query: 221 QIPADVVPDPVDMPLEMADAAATAKEIKQMLLDA-VPLSCNISKAMLPNYDHVTGKAMLT 279
Q D+V + ++EIKQ+L +A L +K NYD LT
Sbjct: 255 QTALDIV--------HQFTTSQASREIKQLLREASAALQVRATKDYCNNYD-------LT 299
Query: 280 SLGLKLGDRVVIAGQKVGTLRFCGTTEFASGQWAGIELDEPEGKNNGSVGKVQYF 334
SL +K GD + + Q G+W G D G + +V YF
Sbjct: 300 SLNVKAGDIITVLEQ------------HPDGRWKGCIHDNRTGND-----RVGYF 337
Score = 34.3 bits (77), Expect = 0.41
Identities = 30/133 (22%), Positives = 57/133 (42%), Gaps = 17/133 (12%)
Query: 94 KRGCNVNDRDGLTDMTLLHYTCKSGAHGIGDVETAVKFATQLIDLGADISLRSRWTNMNA 153
K N D DG + LH+ +G + + L++ A + ++ M
Sbjct: 39 KINVNFQDPDGFS---ALHHAALNGN---------TELISLLLEAQAAVDIKDN-KGMRP 85
Query: 154 LHYAAYFDVPELIRVILKTSKPKDVDATCSDFNFGTALHIAAYNLCAGAVKCLLEQGANP 213
LHYAA+ E ++++LK ++ + LH+AA + + LL+ +NP
Sbjct: 86 LHYAAWQGRKEPMKLVLKAGSAVNIPSDEGHI----PLHLAAQHGHYDVSEMLLQHQSNP 141
Query: 214 AFRNDKGQIPADV 226
++ G+ P D+
Sbjct: 142 CMVDNSGKTPLDL 154
>gi|156142199 euchromatic histone-lysine N-methyltransferase 2
isoform b [Homo sapiens]
Length = 1176
Score = 45.8 bits (107), Expect = 1e-04
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Query: 129 VKFATQLIDLGADISLRSRWTNMNALHYAAYFDVPELIRVILKTSKPKDVDATCSDFNFG 188
++ L+ GAD++L N+ LH+A++ + V+L D +++
Sbjct: 764 IEVIRMLLTRGADVTLTDNEENI-CLHWASFTGSAAIAEVLLNAR----CDLHAVNYHGD 818
Query: 189 TALHIAAYNLCAGAVKCLLEQGANPAFRNDKGQIPADVVPDPVDM 233
T LHIAA V L +GANP RN +G D+ P+ D+
Sbjct: 819 TPLHIAARESYHDCVLLFLSRGANPELRNKEGDTAWDLTPERSDV 863
>gi|156142197 euchromatic histone-lysine N-methyltransferase 2
isoform a [Homo sapiens]
Length = 1210
Score = 45.8 bits (107), Expect = 1e-04
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Query: 129 VKFATQLIDLGADISLRSRWTNMNALHYAAYFDVPELIRVILKTSKPKDVDATCSDFNFG 188
++ L+ GAD++L N+ LH+A++ + V+L D +++
Sbjct: 798 IEVIRMLLTRGADVTLTDNEENI-CLHWASFTGSAAIAEVLLNAR----CDLHAVNYHGD 852
Query: 189 TALHIAAYNLCAGAVKCLLEQGANPAFRNDKGQIPADVVPDPVDM 233
T LHIAA V L +GANP RN +G D+ P+ D+
Sbjct: 853 TPLHIAARESYHDCVLLFLSRGANPELRNKEGDTAWDLTPERSDV 897
>gi|140161500 ankyrin repeat and sterile alpha motif domain
containing 1 [Homo sapiens]
Length = 1134
Score = 45.4 bits (106), Expect = 2e-04
Identities = 49/171 (28%), Positives = 71/171 (41%), Gaps = 26/171 (15%)
Query: 95 RGCNVNDRDGLTDMTLLHYTCKSGAHGIGDVETAVKFATQLIDLGADISLRSRWTNMNAL 154
RG NVN D T T LH+ +G + +V T + D L
Sbjct: 69 RGPNVNCVDS-TGYTPLHHAALNGHKDVVEVLLRNDALTNVADS----------KGCYPL 117
Query: 155 HYAAYFDVPELIRVILKTSKPKDVDATCSDFNFGTALHIAAYNLCAGAVKCLLEQGANPA 214
H AA+ +++R+++ P + + TALH AA VK LLE+ +P
Sbjct: 118 HLAAWKGDAQIVRLLIHQG-PSHTRVNEQNNDNETALHCAAQYGHTEVVKVLLEELTDPT 176
Query: 215 FRNDKGQIPADVVPDPVDMPLEMADAAATAKEIKQMLLDAVP--LSCNISK 263
RN+K + P D+ A E+ +MLL+A P LSCN K
Sbjct: 177 MRNNKFETPLDLA------------ALYGRLEVVKMLLNAHPNLLSCNTKK 215
>gi|68131557 ankyrin repeat domain 28 [Homo sapiens]
Length = 1053
Score = 44.3 bits (103), Expect = 4e-04
Identities = 39/129 (30%), Positives = 59/129 (45%), Gaps = 17/129 (13%)
Query: 98 NVNDRDGLTDMTLLHYTCKSGAHGIGDVETAVKFATQLIDLGADISLRSRWTNMNALHYA 157
NV+DR G T LH+ SG HG + L+ GA+I+ + + A+H+A
Sbjct: 134 NVSDRAG---RTALHHAAFSG-HG--------EMVKLLLSRGANINAFDK-KDRRAIHWA 180
Query: 158 AYFDVPELIRVILKTSKPKDVDATCSDFNFGTALHIAAYNLCAGAVKCLLEQGANPAFRN 217
AY E++++++ + TC D T LH AA + VK LL+ G + N
Sbjct: 181 AYMGHIEVVKLLVSHG----AEVTCKDKKSYTPLHAAASSGMISVVKYLLDLGVDMNEPN 236
Query: 218 DKGQIPADV 226
G P V
Sbjct: 237 AYGNTPLHV 245
Score = 40.0 bits (92), Expect = 0.007
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 14/138 (10%)
Query: 86 DIIGNEILKRGCNVNDRDGLTDMTLLHYTCKSGAHGIGDVETAVKFATQLIDLGADISLR 145
D++ NE++ G VN ++ T LH+ S HG +E L+ GAD++++
Sbjct: 252 DVVVNELIDCGAIVNQKNE-KGFTPLHFAAAS-THGALCLEL-------LVGNGADVNMK 302
Query: 146 SRWTNMNALHYAAYFDVPELIRVILKTSKPKDVDATCSDFNFGTALHIAAYNLCAGAVKC 205
S+ LH A + I+++ D C D N T LHIAA +
Sbjct: 303 SK-DGKTPLHMTALHGRFSRSQTIIQSGAVID----CEDKNGNTPLHIAARYGHELLINT 357
Query: 206 LLEQGANPAFRNDKGQIP 223
L+ GA+ A R G P
Sbjct: 358 LITSGADTAKRGIHGMFP 375
Score = 35.0 bits (79), Expect = 0.24
Identities = 33/132 (25%), Positives = 57/132 (43%), Gaps = 15/132 (11%)
Query: 92 ILKRGCNVNDRDGLTDMTLLHYTCKSGAHGIGDVETAVKFATQLIDLGADISLRSRWTNM 151
+L RG N+N D D +H+ G ++ L+ GA+++ + + +
Sbjct: 159 LLSRGANINAFDK-KDRRAIHWAAYMGH---------IEVVKLLVSHGAEVTCKDK-KSY 207
Query: 152 NALHYAAYFDVPELIRVILKTSKPKDVDATCSDFNFGTALHIAAYNLCAGAVKCLLEQGA 211
LH AA + +++ +L VD + T LH+A YN V L++ GA
Sbjct: 208 TPLHAAASSGMISVVKYLLDLG----VDMNEPNAYGNTPLHVACYNGQDVVVNELIDCGA 263
Query: 212 NPAFRNDKGQIP 223
+N+KG P
Sbjct: 264 IVNQKNEKGFTP 275
Score = 34.3 bits (77), Expect = 0.41
Identities = 39/140 (27%), Positives = 59/140 (42%), Gaps = 20/140 (14%)
Query: 96 GCNVNDRDGLTDMTLLHYTCKSGAHGIGDVETAVKFATQLIDLGADISLRSRWTNMNALH 155
G +VND D T LHY S G K L+ A+ +R + NA+H
Sbjct: 461 GASVNDLDE-RGCTPLHYAATSDTDG--------KCLEYLLRNDANPGIRDK-QGYNAVH 510
Query: 156 YAAYFDVPELIRVILKTSKPKDV-------DATCSDFNFGTA--LHIAAYNLCAGAVKCL 206
Y+A + L ++ + P DV D N T LH+AAY+ A++ L
Sbjct: 511 YSAAYG-HRLCLQLIASETPLDVLMETSGTDMLSDSDNRATISPLHLAAYHGHHQALEVL 569
Query: 207 LEQGANPAFRNDKGQIPADV 226
++ + RN G+ P D+
Sbjct: 570 VQSLLDLDVRNSSGRTPLDL 589
Score = 32.7 bits (73), Expect = 1.2
Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 10/72 (13%)
Query: 135 LIDLGADISLR-SRWTNMNALHYAAYFDVPELIRVILKTSKPKDVDATCSDFNFGTALHI 193
LI GA ++ + S+W + LH A E ++V+LK S D D N+ T LHI
Sbjct: 60 LILSGARVNAKDSKW--LTPLHRAVASCSEEAVQVLLKHS----ADVNARDKNWQTPLHI 113
Query: 194 AAYNLCAGAVKC 205
AA N AVKC
Sbjct: 114 AAAN---KAVKC 122
Score = 31.2 bits (69), Expect = 3.4
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 11/118 (9%)
Query: 92 ILKRGCNVNDRDGLTDMTLLHYTCKSGAHGIGDVETAVKFATQLIDLGADISLRSRWTNM 151
+L +G NV+ +D T LH +G D L+ GA LR
Sbjct: 672 LLNKGANVDAKDKW-GRTALHRGAVTGHEECVDA---------LLQHGAKCLLRDS-RGR 720
Query: 152 NALHYAAYFDVPELIRVILKTSKPKDVDATCSDFNFGTALHIAAYNLCAGAVKCLLEQ 209
+H +A ++ +L+++ D + +D + TALH A YN V+ LLEQ
Sbjct: 721 TPIHLSAACGHIGVLGALLQSAASMDANPATADNHGYTALHWACYNGHETCVELLLEQ 778
>gi|188595682 ankyrin 2 isoform 3 [Homo sapiens]
Length = 1863
Score = 44.3 bits (103), Expect = 4e-04
Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 19/137 (13%)
Query: 92 ILKRGCNVN--DRDGLTDMTLLHYTCKSGAHGIGDVETAVKFATQLIDLGADISLRSRWT 149
+L RG ++ RDGLT LH +SG + ++ L++ GA + R++
Sbjct: 264 LLDRGGQIDAKTRDGLTP---LHCAARSGHDQVVEL---------LLERGAPLLARTK-N 310
Query: 150 NMNALHYAAYFDVPELIRVILKTSKPKDVDATCSDFNFGTALHIAAYNLCAGAVKCLLEQ 209
++ LH AA D E ++ +L+ P D D T ++ TALH+AA+ K LL++
Sbjct: 311 GLSPLHMAAQGDHVECVKHLLQHKAPVD-DVT---LDYLTALHVAAHCGHYRVTKLLLDK 366
Query: 210 GANPAFRNDKGQIPADV 226
ANP R G P +
Sbjct: 367 RANPNARALNGFTPLHI 383
Score = 39.7 bits (91), Expect = 0.010
Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 19/138 (13%)
Query: 91 EILKRGCNVN--DRDGLTDMTLLHYTCKSGAHGIGDVETAVKFATQLIDLGADISLRSRW 148
E LK G ++N +++GL LH K G G+ +L+ G+ + ++
Sbjct: 28 EYLKGGIDINTCNQNGLN---ALHLAAKEGHVGL---------VQELLGRGSSVDSATKK 75
Query: 149 TNMNALHYAAYFDVPELIRVILKTSKPKDVDATCSDFNFGTALHIAAYNLCAGAVKCLLE 208
N ALH A+ E+++V++K + + N T L++AA VK LLE
Sbjct: 76 GN-TALHIASLAGQAEVVKVLVK----EGANINAQSQNGFTPLYMAAQENHIDVVKYLLE 130
Query: 209 QGANPAFRNDKGQIPADV 226
GAN + + G P V
Sbjct: 131 NGANQSTATEDGFTPLAV 148
Score = 39.7 bits (91), Expect = 0.010
Identities = 36/135 (26%), Positives = 57/135 (42%), Gaps = 15/135 (11%)
Query: 92 ILKRGCNVNDRDGLTDMTLLHYTCKSGAHGIGDVETAVKFATQLIDLGADISLRSRWTNM 151
+L + N N R L T LH CK + +K L+ GA I + + +
Sbjct: 363 LLDKRANPNAR-ALNGFTPLHIACK---------KNRIKVMELLVKYGASIQAITE-SGL 411
Query: 152 NALHYAAYFDVPELIRVILKTSKPKDVDATCSDFNFGTALHIAAYNLCAGAVKCLLEQGA 211
+H AA+ ++ ++L+ DV ++ TALH+AA V+CLL GA
Sbjct: 412 TPIHVAAFMGHLNIVLLLLQNGASPDV----TNIRGETALHMAARAGQVEVVRCLLRNGA 467
Query: 212 NPAFRNDKGQIPADV 226
R + Q P +
Sbjct: 468 LVDARAREEQTPLHI 482
Score = 32.3 bits (72), Expect = 1.5
Identities = 32/118 (27%), Positives = 47/118 (39%), Gaps = 14/118 (11%)
Query: 109 TLLHYTCKSGAHGIGDVETAVKFATQLIDLGADISLRSRWTNMNALHYAAYFDVPELIRV 168
T LH ++G V+ L+ GA + R+R LH A+ E++++
Sbjct: 445 TALHMAARAGQ---------VEVVRCLLRNGALVDARAR-EEQTPLHIASRLGKTEIVQL 494
Query: 169 ILKTSKPKDVDATCSDFNFGTALHIAAYNLCAGAVKCLLEQGANPAFRNDKGQIPADV 226
+L+ D T N T LHI+A LLE GA + KG P V
Sbjct: 495 LLQHMAHPDAATT----NGYTPLHISAREGQVDVASVLLEAGAAHSLATKKGFTPLHV 548
Score = 32.3 bits (72), Expect = 1.5
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 5/101 (4%)
Query: 126 ETAVKFATQLIDLGADISLRSRWTNMNALHYAAYFDVPELIRVILKTSKPKDVDATCSDF 185
E V A+ L++ GA SL ++ LH AA + ++ +++L+ D +
Sbjct: 519 EGQVDVASVLLEAGAAHSLATK-KGFTPLHVAAKYGSLDVAKLLLQRRAAAD----SAGK 573
Query: 186 NFGTALHIAAYNLCAGAVKCLLEQGANPAFRNDKGQIPADV 226
N T LH+AA+ LLE+GA+P G P +
Sbjct: 574 NGLTPLHVAAHYDNQKVALLLLEKGASPHATAKNGYTPLHI 614
>gi|52426737 ankyrin 2 isoform 2 [Homo sapiens]
Length = 1872
Score = 44.3 bits (103), Expect = 4e-04
Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 19/137 (13%)
Query: 92 ILKRGCNVN--DRDGLTDMTLLHYTCKSGAHGIGDVETAVKFATQLIDLGADISLRSRWT 149
+L RG ++ RDGLT LH +SG + ++ L++ GA + R++
Sbjct: 285 LLDRGGQIDAKTRDGLTP---LHCAARSGHDQVVEL---------LLERGAPLLARTK-N 331
Query: 150 NMNALHYAAYFDVPELIRVILKTSKPKDVDATCSDFNFGTALHIAAYNLCAGAVKCLLEQ 209
++ LH AA D E ++ +L+ P D D T ++ TALH+AA+ K LL++
Sbjct: 332 GLSPLHMAAQGDHVECVKHLLQHKAPVD-DVT---LDYLTALHVAAHCGHYRVTKLLLDK 387
Query: 210 GANPAFRNDKGQIPADV 226
ANP R G P +
Sbjct: 388 RANPNARALNGFTPLHI 404
Score = 39.7 bits (91), Expect = 0.010
Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 19/138 (13%)
Query: 91 EILKRGCNVN--DRDGLTDMTLLHYTCKSGAHGIGDVETAVKFATQLIDLGADISLRSRW 148
E LK G ++N +++GL LH K G G+ +L+ G+ + ++
Sbjct: 49 EYLKGGIDINTCNQNGLN---ALHLAAKEGHVGL---------VQELLGRGSSVDSATKK 96
Query: 149 TNMNALHYAAYFDVPELIRVILKTSKPKDVDATCSDFNFGTALHIAAYNLCAGAVKCLLE 208
N ALH A+ E+++V++K + + N T L++AA VK LLE
Sbjct: 97 GN-TALHIASLAGQAEVVKVLVK----EGANINAQSQNGFTPLYMAAQENHIDVVKYLLE 151
Query: 209 QGANPAFRNDKGQIPADV 226
GAN + + G P V
Sbjct: 152 NGANQSTATEDGFTPLAV 169
Score = 39.7 bits (91), Expect = 0.010
Identities = 36/135 (26%), Positives = 57/135 (42%), Gaps = 15/135 (11%)
Query: 92 ILKRGCNVNDRDGLTDMTLLHYTCKSGAHGIGDVETAVKFATQLIDLGADISLRSRWTNM 151
+L + N N R L T LH CK + +K L+ GA I + + +
Sbjct: 384 LLDKRANPNAR-ALNGFTPLHIACK---------KNRIKVMELLVKYGASIQAITE-SGL 432
Query: 152 NALHYAAYFDVPELIRVILKTSKPKDVDATCSDFNFGTALHIAAYNLCAGAVKCLLEQGA 211
+H AA+ ++ ++L+ DV ++ TALH+AA V+CLL GA
Sbjct: 433 TPIHVAAFMGHLNIVLLLLQNGASPDV----TNIRGETALHMAARAGQVEVVRCLLRNGA 488
Query: 212 NPAFRNDKGQIPADV 226
R + Q P +
Sbjct: 489 LVDARAREEQTPLHI 503
Score = 32.3 bits (72), Expect = 1.5
Identities = 32/118 (27%), Positives = 47/118 (39%), Gaps = 14/118 (11%)
Query: 109 TLLHYTCKSGAHGIGDVETAVKFATQLIDLGADISLRSRWTNMNALHYAAYFDVPELIRV 168
T LH ++G V+ L+ GA + R+R LH A+ E++++
Sbjct: 466 TALHMAARAGQ---------VEVVRCLLRNGALVDARAR-EEQTPLHIASRLGKTEIVQL 515
Query: 169 ILKTSKPKDVDATCSDFNFGTALHIAAYNLCAGAVKCLLEQGANPAFRNDKGQIPADV 226
+L+ D T N T LHI+A LLE GA + KG P V
Sbjct: 516 LLQHMAHPDAATT----NGYTPLHISAREGQVDVASVLLEAGAAHSLATKKGFTPLHV 569
Score = 32.3 bits (72), Expect = 1.5
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 5/101 (4%)
Query: 126 ETAVKFATQLIDLGADISLRSRWTNMNALHYAAYFDVPELIRVILKTSKPKDVDATCSDF 185
E V A+ L++ GA SL ++ LH AA + ++ +++L+ D +
Sbjct: 540 EGQVDVASVLLEAGAAHSLATK-KGFTPLHVAAKYGSLDVAKLLLQRRAAAD----SAGK 594
Query: 186 NFGTALHIAAYNLCAGAVKCLLEQGANPAFRNDKGQIPADV 226
N T LH+AA+ LLE+GA+P G P +
Sbjct: 595 NGLTPLHVAAHYDNQKVALLLLEKGASPHATAKNGYTPLHI 635
>gi|52426735 ankyrin 2 isoform 1 [Homo sapiens]
Length = 3957
Score = 44.3 bits (103), Expect = 4e-04
Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 19/137 (13%)
Query: 92 ILKRGCNVN--DRDGLTDMTLLHYTCKSGAHGIGDVETAVKFATQLIDLGADISLRSRWT 149
+L RG ++ RDGLT LH +SG + ++ L++ GA + R++
Sbjct: 285 LLDRGGQIDAKTRDGLTP---LHCAARSGHDQVVEL---------LLERGAPLLARTK-N 331
Query: 150 NMNALHYAAYFDVPELIRVILKTSKPKDVDATCSDFNFGTALHIAAYNLCAGAVKCLLEQ 209
++ LH AA D E ++ +L+ P D D T ++ TALH+AA+ K LL++
Sbjct: 332 GLSPLHMAAQGDHVECVKHLLQHKAPVD-DVT---LDYLTALHVAAHCGHYRVTKLLLDK 387
Query: 210 GANPAFRNDKGQIPADV 226
ANP R G P +
Sbjct: 388 RANPNARALNGFTPLHI 404
Score = 39.7 bits (91), Expect = 0.010
Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 19/138 (13%)
Query: 91 EILKRGCNVN--DRDGLTDMTLLHYTCKSGAHGIGDVETAVKFATQLIDLGADISLRSRW 148
E LK G ++N +++GL LH K G G+ +L+ G+ + ++
Sbjct: 49 EYLKGGIDINTCNQNGLN---ALHLAAKEGHVGL---------VQELLGRGSSVDSATKK 96
Query: 149 TNMNALHYAAYFDVPELIRVILKTSKPKDVDATCSDFNFGTALHIAAYNLCAGAVKCLLE 208
N ALH A+ E+++V++K + + N T L++AA VK LLE
Sbjct: 97 GN-TALHIASLAGQAEVVKVLVK----EGANINAQSQNGFTPLYMAAQENHIDVVKYLLE 151
Query: 209 QGANPAFRNDKGQIPADV 226
GAN + + G P V
Sbjct: 152 NGANQSTATEDGFTPLAV 169
Score = 39.7 bits (91), Expect = 0.010
Identities = 36/135 (26%), Positives = 57/135 (42%), Gaps = 15/135 (11%)
Query: 92 ILKRGCNVNDRDGLTDMTLLHYTCKSGAHGIGDVETAVKFATQLIDLGADISLRSRWTNM 151
+L + N N R L T LH CK + +K L+ GA I + + +
Sbjct: 384 LLDKRANPNAR-ALNGFTPLHIACK---------KNRIKVMELLVKYGASIQAITE-SGL 432
Query: 152 NALHYAAYFDVPELIRVILKTSKPKDVDATCSDFNFGTALHIAAYNLCAGAVKCLLEQGA 211
+H AA+ ++ ++L+ DV ++ TALH+AA V+CLL GA
Sbjct: 433 TPIHVAAFMGHLNIVLLLLQNGASPDV----TNIRGETALHMAARAGQVEVVRCLLRNGA 488
Query: 212 NPAFRNDKGQIPADV 226
R + Q P +
Sbjct: 489 LVDARAREEQTPLHI 503
Score = 32.3 bits (72), Expect = 1.5
Identities = 32/118 (27%), Positives = 47/118 (39%), Gaps = 14/118 (11%)
Query: 109 TLLHYTCKSGAHGIGDVETAVKFATQLIDLGADISLRSRWTNMNALHYAAYFDVPELIRV 168
T LH ++G V+ L+ GA + R+R LH A+ E++++
Sbjct: 466 TALHMAARAGQ---------VEVVRCLLRNGALVDARAR-EEQTPLHIASRLGKTEIVQL 515
Query: 169 ILKTSKPKDVDATCSDFNFGTALHIAAYNLCAGAVKCLLEQGANPAFRNDKGQIPADV 226
+L+ D T N T LHI+A LLE GA + KG P V
Sbjct: 516 LLQHMAHPDAATT----NGYTPLHISAREGQVDVASVLLEAGAAHSLATKKGFTPLHV 569
Score = 32.3 bits (72), Expect = 1.5
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 5/101 (4%)
Query: 126 ETAVKFATQLIDLGADISLRSRWTNMNALHYAAYFDVPELIRVILKTSKPKDVDATCSDF 185
E V A+ L++ GA SL ++ LH AA + ++ +++L+ D +
Sbjct: 540 EGQVDVASVLLEAGAAHSLATK-KGFTPLHVAAKYGSLDVAKLLLQRRAAAD----SAGK 594
Query: 186 NFGTALHIAAYNLCAGAVKCLLEQGANPAFRNDKGQIPADV 226
N T LH+AA+ LLE+GA+P G P +
Sbjct: 595 NGLTPLHVAAHYDNQKVALLLLEKGASPHATAKNGYTPLHI 635
>gi|56676397 ankyrin repeat domain 11 [Homo sapiens]
Length = 2663
Score = 44.3 bits (103), Expect = 4e-04
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 9/115 (7%)
Query: 134 QLIDLGADISLR--SRWTNMNALHYAAYFDVPELIRVILKTSKPKDVDATCSDFNFGTAL 191
+LI GAD++++ + WT ++ Y+DV + + K +D T L
Sbjct: 186 ELISEGADVNVKDFAGWTALHEACNRGYYDVAKQLLAAGAEVNTKGLDDD-------TPL 238
Query: 192 HIAAYNLCAGAVKCLLEQGANPAFRNDKGQIPADVVPDPVDMPLEMADAAATAKE 246
H AA N VK LL G NP N KG+ P V P + L + T+ E
Sbjct: 239 HDAANNGHYKVVKLLLRYGGNPQQSNRKGETPLKVANSPTMVNLLLGKGTYTSSE 293
>gi|38176283 ankyrin repeat and SOCS box-containing protein 7
isoform 2 [Homo sapiens]
Length = 318
Score = 43.9 bits (102), Expect = 5e-04
Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 91 EILKRGCNVNDRDGLTDMTLLHYTCKSGAHGIGDVETAVKFATQLIDLGADISLRSRWTN 150
++L++G + N RD TLLH++ G E V+ ++ GAD +++
Sbjct: 32 KMLEQGYSPNGRDA-NGWTLLHFSAARGK------ERCVRV---FLEHGADPTVKDLIGG 81
Query: 151 MNALHYAAYFDVPELIRVILKTSKPKDVDATCSDFNFGTALHIAAYNLCAGAVKCLLEQG 210
ALHYAA + R++L++ D+ S+ + T LH+AA+ V+ LLE
Sbjct: 82 FTALHYAAMHGRARIARLMLESEYRSDIINAKSNDGW-TPLHVAAHYGRDSFVRLLLEFK 140
Query: 211 ANPAFRNDKGQIP 223
A +DKG P
Sbjct: 141 AEVDPLSDKGTTP 153
>gi|30089994 ankyrin repeat and SOCS box-containing protein 7
isoform 1 [Homo sapiens]
Length = 274
Score = 43.9 bits (102), Expect = 5e-04
Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 91 EILKRGCNVNDRDGLTDMTLLHYTCKSGAHGIGDVETAVKFATQLIDLGADISLRSRWTN 150
++L++G + N RD TLLH++ G E V+ ++ GAD +++
Sbjct: 32 KMLEQGYSPNGRDA-NGWTLLHFSAARGK------ERCVRV---FLEHGADPTVKDLIGG 81
Query: 151 MNALHYAAYFDVPELIRVILKTSKPKDVDATCSDFNFGTALHIAAYNLCAGAVKCLLEQG 210
ALHYAA + R++L++ D+ S+ + T LH+AA+ V+ LLE
Sbjct: 82 FTALHYAAMHGRARIARLMLESEYRSDIINAKSNDGW-TPLHVAAHYGRDSFVRLLLEFK 140
Query: 211 ANPAFRNDKGQIP 223
A +DKG P
Sbjct: 141 AEVDPLSDKGTTP 153
>gi|134948605 ankyrin repeat domain 12 isoform 2 [Homo sapiens]
Length = 2039
Score = 43.5 bits (101), Expect = 7e-04
Identities = 36/132 (27%), Positives = 57/132 (43%), Gaps = 24/132 (18%)
Query: 129 VKFATQLIDLGADISLR--SRWTNMNALHYAAYFDVPELIRVILKTSKPKDVDATCSDFN 186
VK +LI LGA+++++ + WT ++ Y+DV +++ D +
Sbjct: 175 VKQVKELISLGANVNVKDFAGWTPLHEACNVGYYDVAKILIAA-------GADVNTQGLD 227
Query: 187 FGTALHIAAYNLCAGAVKCLLEQGANPAFRNDKGQIPADVVPDPVDMPLEMADAAATAKE 246
T LH +A + VK LL G NP N G+ P DV A +E
Sbjct: 228 DDTPLHDSASSGHRDIVKLLLRHGGNPFQANKHGERPVDV---------------AETEE 272
Query: 247 IKQMLLDAVPLS 258
++ +L VPLS
Sbjct: 273 LELLLKREVPLS 284
>gi|134948558 ankyrin repeat domain 12 isoform 1 [Homo sapiens]
Length = 2062
Score = 43.5 bits (101), Expect = 7e-04
Identities = 36/132 (27%), Positives = 57/132 (43%), Gaps = 24/132 (18%)
Query: 129 VKFATQLIDLGADISLR--SRWTNMNALHYAAYFDVPELIRVILKTSKPKDVDATCSDFN 186
VK +LI LGA+++++ + WT ++ Y+DV +++ D +
Sbjct: 198 VKQVKELISLGANVNVKDFAGWTPLHEACNVGYYDVAKILIAA-------GADVNTQGLD 250
Query: 187 FGTALHIAAYNLCAGAVKCLLEQGANPAFRNDKGQIPADVVPDPVDMPLEMADAAATAKE 246
T LH +A + VK LL G NP N G+ P DV A +E
Sbjct: 251 DDTPLHDSASSGHRDIVKLLLRHGGNPFQANKHGERPVDV---------------AETEE 295
Query: 247 IKQMLLDAVPLS 258
++ +L VPLS
Sbjct: 296 LELLLKREVPLS 307
>gi|87239981 tankyrase, TRF1-interacting ankyrin-related ADP-ribose
polymerase [Homo sapiens]
Length = 1327
Score = 43.1 bits (100), Expect = 9e-04
Identities = 47/160 (29%), Positives = 75/160 (46%), Gaps = 30/160 (18%)
Query: 98 NVNDRDGL-TDMTLLHYTCKSGAHGIGDVETAVKFATQLIDLGADISLRSRWTNMNALHY 156
N+N RD + T LH A G ++E A L++ GAD++ + + + LH
Sbjct: 827 NINCRDTQGRNSTPLHL-----AAGYNNLEVA----EYLLEHGADVNAQDKG-GLIPLHN 876
Query: 157 AAYFDVPELIRVILKTSKPKDVDATCSDFNFGTALHIAAYNLCAGAVKCLLEQGANPAFR 216
AA + ++ +++K + V+AT D T LH AA LL GA+P +
Sbjct: 877 AASYGHVDIAALLIKYNTC--VNAT--DKWAFTPLHEAAQKGRTQLCALLLAHGADPTMK 932
Query: 217 NDKGQIPADVVPDPVDMPLEMADAAATAKEIKQMLLDAVP 256
N +GQ P D+ ATA +I+ +L+DA+P
Sbjct: 933 NQEGQTPLDL---------------ATADDIRALLIDAMP 957
Score = 37.4 bits (85), Expect = 0.048
Identities = 52/209 (24%), Positives = 85/209 (40%), Gaps = 24/209 (11%)
Query: 63 PKTSVSELFAILRQWVPQVQQNIDIIGNEILKRGCNVNDRDGL-TDMTLLHYTCKSGAHG 121
P T V + LR+ + + +N D+ + L NVN +D + LH+ G
Sbjct: 172 PGTGVPAVSGALRELL-EACRNGDVSRVKRLVDAANVNAKDMAGRKSSPLHFAAGFGRKD 230
Query: 122 IGDVETAVKFATQLIDLGADISLRSRWTNMNALHYAAYFDVPELIRVILKTSKPKDVDAT 181
+ + L+ +GA++ R + LH A F E++ ++L + D
Sbjct: 231 VVE---------HLLQMGANVHARDDG-GLIPLHNACSFGHAEVVSLLLC----QGADPN 276
Query: 182 CSDFNFGTALHIAAYNLCAGAVKCLLEQGANPAFRNDKGQIPADVVPDPVDMPL------ 235
D T LH AA LL+ GA+P RN G+ D+ L
Sbjct: 277 ARDNWNYTPLHEAAIKGKIDVCIVLLQHGADPNIRNTDGKSALDLADPSAKAVLTGEYKK 336
Query: 236 -EMADAAATAKEIKQM-LLDAVPLSCNIS 262
E+ +AA + E K M LL + ++C+ S
Sbjct: 337 DELLEAARSGNEEKLMALLTPLNVNCHAS 365
Score = 33.9 bits (76), Expect = 0.53
Identities = 52/179 (29%), Positives = 76/179 (42%), Gaps = 37/179 (20%)
Query: 91 EILKRGC---NVNDRD-GLTDMTLLHYTCKSGAHGIGDVETAVKFATQLIDLGADISLRS 146
E +K+ C NVN RD T LH+ +G + + VE L+ GAD+ +
Sbjct: 664 ETVKQLCSSQNVNCRDLEGRHSTPLHFA--AGYNRVSVVE-------YLLHHGADVHAKD 714
Query: 147 RWTNMNALHYAAYFDVPELIRVILKTSKPKDVDATCSDFNFGTALHIAA----YNLCAGA 202
+ + LH A + E+ ++++ +V +D T LH AA Y +C
Sbjct: 715 KG-GLVPLHNACSYGHYEVAELLVRHGASVNV----ADLWKFTPLHEAAAKGKYEIC--- 766
Query: 203 VKCLLEQGANPAFRNDKGQIPADVVP--DPVDMPLEMADAAATAKEIKQMLLDAVPLSC 259
K LL+ GA+P +N G P D+V D L DAA LLDA C
Sbjct: 767 -KLLLKHGADPTKKNRDGNTPLDLVKEGDTDIQDLLRGDAA---------LLDAAKKGC 815
Score = 32.3 bits (72), Expect = 1.5
Identities = 35/147 (23%), Positives = 57/147 (38%), Gaps = 11/147 (7%)
Query: 90 NEILKRGCNVNDRDGLTDMTLLHYTC------KSGAHGIGDVETAVKFATQLIDLGADIS 143
+E+L+ + N+ + +T L+ C KS + V+ L+ GAD+
Sbjct: 337 DELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVH 396
Query: 144 LRSRWTNMNALHYAAYFDVPELIRVILKTSKPKDVDATCSDFNFGTALHIAAYNLCAGAV 203
+ + + LH A + E+ ++LK D T LH AA
Sbjct: 397 AKDKG-GLVPLHNACSYGHYEVTELLLKHG----ACVNAMDLWQFTPLHEAASKNRVEVC 451
Query: 204 KCLLEQGANPAFRNDKGQIPADVVPDP 230
LL GA+P N G+ D+ P P
Sbjct: 452 SLLLSHGADPTLVNCHGKSAVDMAPTP 478
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.131 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,297,682
Number of Sequences: 37866
Number of extensions: 1148425
Number of successful extensions: 4293
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 132
Number of HSP's that attempted gapping in prelim test: 3831
Number of HSP's gapped (non-prelim): 536
length of query: 705
length of database: 18,247,518
effective HSP length: 109
effective length of query: 596
effective length of database: 14,120,124
effective search space: 8415593904
effective search space used: 8415593904
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.